Query 005859
Match_columns 673
No_of_seqs 700 out of 4928
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 09:23:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 2.1E-57 7.1E-62 468.8 19.2 261 403-672 27-307 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.6E-57 5.4E-62 467.7 17.1 261 402-672 13-290 (299)
3 3omv_A RAF proto-oncogene seri 100.0 8.2E-57 2.8E-61 462.4 22.0 261 401-672 35-301 (307)
4 4aoj_A High affinity nerve gro 100.0 9E-57 3.1E-61 468.4 21.2 261 402-672 41-320 (329)
5 4ase_A Vascular endothelial gr 100.0 9.9E-56 3.4E-60 464.3 16.9 275 391-672 53-348 (353)
6 3fpq_A Serine/threonine-protei 100.0 3.5E-54 1.2E-58 439.7 20.4 249 405-664 29-282 (290)
7 4b9d_A Serine/threonine-protei 100.0 2.7E-54 9.3E-59 449.9 18.4 251 402-664 24-276 (350)
8 4fih_A Serine/threonine-protei 100.0 7E-54 2.4E-58 446.1 20.1 249 402-664 74-323 (346)
9 3hmm_A TGF-beta receptor type- 100.0 4.7E-54 1.6E-58 444.6 18.2 261 403-671 4-297 (303)
10 4g3f_A NF-kappa-beta-inducing 100.0 6.1E-54 2.1E-58 445.2 17.8 253 402-671 58-316 (336)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-53 5.1E-58 437.1 14.1 248 402-663 32-283 (311)
12 4fie_A Serine/threonine-protei 100.0 1.3E-52 4.5E-57 447.1 20.9 250 401-664 150-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.6E-52 5.4E-57 423.7 19.8 246 402-664 13-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1E-52 3.5E-57 430.9 13.1 248 402-664 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 1.8E-51 6.2E-56 423.3 19.7 253 402-664 5-279 (299)
16 4b99_A Mitogen-activated prote 100.0 2.2E-48 7.6E-53 415.5 20.8 256 402-664 54-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1E-47 3.5E-52 406.0 19.4 256 395-664 14-352 (361)
18 3uim_A Brassinosteroid insensi 100.0 4.3E-47 1.5E-51 398.1 20.2 278 390-669 18-309 (326)
19 2qkw_B Protein kinase; three-h 100.0 1.8E-46 6E-51 392.7 20.6 276 391-671 28-315 (321)
20 3uto_A Twitchin; kinase, muscl 100.0 9E-47 3.1E-51 422.6 18.7 251 402-664 157-410 (573)
21 3v5w_A G-protein coupled recep 100.0 8.1E-47 2.8E-51 420.0 17.9 249 402-664 189-449 (689)
22 2psq_A Fibroblast growth facto 100.0 3.7E-45 1.3E-49 390.1 20.5 262 401-671 80-364 (370)
23 3p86_A Serine/threonine-protei 100.0 7.5E-45 2.6E-49 378.1 21.0 269 395-672 30-299 (309)
24 4hcu_A Tyrosine-protein kinase 100.0 8.7E-45 3E-49 369.8 21.1 257 402-672 10-267 (269)
25 3zgw_A Maternal embryonic leuc 100.0 7.3E-45 2.5E-49 383.4 18.7 250 401-664 9-260 (347)
26 3kul_A Ephrin type-A receptor 100.0 7.2E-45 2.5E-49 381.1 18.2 260 401-672 48-314 (325)
27 2qol_A Ephrin receptor; recept 100.0 6.5E-45 2.2E-49 388.5 17.4 259 401-671 44-309 (373)
28 1qcf_A Haematopoetic cell kina 100.0 8.9E-45 3E-49 397.9 18.9 261 398-672 184-445 (454)
29 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-44 4.5E-49 376.5 19.1 258 402-671 10-282 (310)
30 3gen_A Tyrosine-protein kinase 100.0 3.4E-44 1.2E-48 368.2 21.5 257 401-671 23-280 (283)
31 3cbl_A C-FES, proto-oncogene t 100.0 3.2E-45 1.1E-49 391.8 14.0 259 401-671 113-374 (377)
32 3ugc_A Tyrosine-protein kinase 100.0 7.5E-45 2.6E-49 375.5 16.1 266 401-672 9-292 (295)
33 3soc_A Activin receptor type-2 100.0 9.7E-45 3.3E-49 379.6 17.1 263 401-671 23-318 (322)
34 3fxz_A Serine/threonine-protei 100.0 4.4E-44 1.5E-48 370.2 21.2 250 401-664 19-269 (297)
35 3vhe_A Vascular endothelial gr 100.0 8.3E-45 2.8E-49 386.0 15.8 275 391-672 11-356 (359)
36 4euu_A Serine/threonine-protei 100.0 9.4E-44 3.2E-48 371.6 23.3 264 402-670 9-308 (319)
37 4eqm_A Protein kinase; transfe 100.0 2.5E-44 8.6E-49 371.5 18.3 261 402-671 11-275 (294)
38 3lb7_A RAF proto-oncogene seri 100.0 7.3E-44 2.5E-48 370.3 21.8 262 401-672 35-301 (307)
39 3sxs_A Cytoplasmic tyrosine-pr 100.0 3E-44 1E-48 365.5 18.3 257 401-671 7-264 (268)
40 2c30_A Serine/threonine-protei 100.0 1.4E-43 4.7E-48 370.7 23.7 261 390-664 23-294 (321)
41 2nru_A Interleukin-1 receptor- 100.0 2.1E-43 7.3E-48 366.7 24.5 275 390-672 13-307 (307)
42 3fe3_A MAP/microtubule affinit 100.0 5.5E-44 1.9E-48 374.4 20.1 248 401-664 14-264 (328)
43 1opk_A P150, C-ABL, proto-onco 100.0 2.2E-44 7.7E-49 398.6 18.0 260 400-672 218-479 (495)
44 1luf_A Muscle-specific tyrosin 100.0 2.9E-44 9.9E-49 379.2 16.7 269 395-672 40-336 (343)
45 3q4u_A Activin receptor type-1 100.0 7.4E-44 2.5E-48 368.9 19.4 257 401-669 7-300 (301)
46 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.5E-44 1.2E-48 392.8 17.9 259 400-672 182-441 (452)
47 1mp8_A Focal adhesion kinase 1 100.0 3.8E-44 1.3E-48 367.5 16.5 258 401-671 14-276 (281)
48 3l9p_A Anaplastic lymphoma kin 100.0 4E-44 1.4E-48 381.8 17.0 262 401-671 70-345 (367)
49 3poz_A Epidermal growth factor 100.0 5E-44 1.7E-48 375.0 17.1 257 402-671 15-278 (327)
50 3tt0_A Basic fibroblast growth 100.0 1E-43 3.5E-48 380.9 19.5 263 400-671 67-352 (382)
51 2ivs_A Proto-oncogene tyrosine 100.0 8.3E-44 2.8E-48 370.8 17.5 263 400-671 21-311 (314)
52 3kmu_A ILK, integrin-linked ki 100.0 3.1E-43 1E-47 358.2 21.2 257 402-671 10-270 (271)
53 1k9a_A Carboxyl-terminal SRC k 100.0 1.9E-43 6.6E-48 386.7 21.1 254 400-671 191-445 (450)
54 3t9t_A Tyrosine-protein kinase 100.0 1.7E-43 5.8E-48 359.5 19.0 258 401-672 7-265 (267)
55 2zv2_A Calcium/calmodulin-depe 100.0 3.9E-43 1.3E-47 363.2 22.0 251 402-664 13-292 (298)
56 4e5w_A Tyrosine-protein kinase 100.0 1.1E-43 3.6E-48 368.0 17.6 265 402-671 21-302 (302)
57 1o6l_A RAC-beta serine/threoni 100.0 2.3E-43 7.9E-48 370.7 20.3 248 402-664 5-260 (337)
58 2yab_A Death-associated protei 100.0 2.2E-43 7.5E-48 374.3 20.0 252 401-664 11-272 (361)
59 4f0f_A Serine/threonine-protei 100.0 7.5E-43 2.6E-47 358.9 22.1 255 402-669 19-287 (287)
60 4eut_A Serine/threonine-protei 100.0 2.3E-43 8E-48 379.9 19.1 265 402-671 9-309 (396)
61 3lxp_A Non-receptor tyrosine-p 100.0 2.4E-43 8.2E-48 368.4 18.6 262 403-671 32-310 (318)
62 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-43 3.8E-48 396.7 17.0 259 400-672 265-524 (535)
63 1t46_A HOMO sapiens V-KIT hard 100.0 2.6E-43 8.8E-48 366.9 18.5 265 400-672 21-308 (313)
64 3kfa_A Tyrosine-protein kinase 100.0 8.8E-44 3E-48 366.0 14.4 259 400-671 11-271 (288)
65 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-43 1E-47 362.5 18.3 261 401-671 23-288 (289)
66 3tki_A Serine/threonine-protei 100.0 2.3E-43 7.9E-48 369.2 17.7 252 402-664 7-261 (323)
67 3qd2_B Eukaryotic translation 100.0 4.9E-43 1.7E-47 367.8 20.1 254 401-664 5-325 (332)
68 1qpc_A LCK kinase; alpha beta 100.0 3.1E-43 1.1E-47 360.2 18.1 257 401-671 12-269 (279)
69 2y0a_A Death-associated protei 100.0 5.2E-43 1.8E-47 367.1 19.7 251 402-664 11-271 (326)
70 1rjb_A FL cytokine receptor; k 100.0 3.5E-43 1.2E-47 371.2 18.5 266 399-672 42-335 (344)
71 1tki_A Titin; serine kinase, m 100.0 2.6E-43 8.7E-48 368.5 17.2 251 401-664 4-257 (321)
72 3cc6_A Protein tyrosine kinase 100.0 2.5E-43 8.5E-48 361.4 16.7 258 401-671 11-273 (281)
73 4aw2_A Serine/threonine-protei 100.0 1E-43 3.6E-48 385.4 14.2 265 392-664 64-338 (437)
74 3c1x_A Hepatocyte growth facto 100.0 2.7E-43 9.4E-48 375.6 17.1 260 402-672 89-356 (373)
75 3kex_A Receptor tyrosine-prote 100.0 2.8E-43 9.5E-48 369.1 16.8 257 402-671 13-276 (325)
76 3dtc_A Mitogen-activated prote 100.0 9E-43 3.1E-47 355.1 19.8 253 402-669 7-271 (271)
77 3uc3_A Serine/threonine-protei 100.0 6.8E-43 2.3E-47 371.3 19.6 252 401-664 19-274 (361)
78 2bdw_A Hypothetical protein K1 100.0 9.2E-43 3.1E-47 370.3 20.5 253 400-664 27-284 (362)
79 2xir_A Vascular endothelial gr 100.0 3.5E-43 1.2E-47 366.5 16.8 274 391-671 16-310 (316)
80 3soa_A Calcium/calmodulin-depe 100.0 1.3E-42 4.3E-47 378.2 21.8 254 400-664 9-267 (444)
81 3niz_A Rhodanese family protei 100.0 1.4E-42 4.8E-47 361.4 21.2 255 401-664 20-300 (311)
82 2ozo_A Tyrosine-protein kinase 100.0 7.9E-43 2.7E-47 395.4 20.8 250 409-671 343-598 (613)
83 3qup_A Tyrosine-protein kinase 100.0 2.2E-43 7.6E-48 369.4 14.8 269 396-671 17-298 (323)
84 3mdy_A Bone morphogenetic prot 100.0 2E-42 6.9E-47 364.1 22.2 264 399-672 34-332 (337)
85 2eva_A TAK1 kinase - TAB1 chim 100.0 9.9E-43 3.4E-47 361.9 19.5 253 402-671 8-263 (307)
86 3lxl_A Tyrosine-protein kinase 100.0 2.8E-43 9.6E-48 369.4 15.4 264 402-671 23-303 (327)
87 3c0i_A Peripheral plasma membr 100.0 6.9E-43 2.3E-47 370.0 18.5 254 401-664 23-286 (351)
88 2pvf_A Fibroblast growth facto 100.0 6.9E-43 2.3E-47 367.6 17.7 262 401-671 34-318 (334)
89 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-42 4.5E-47 362.6 19.7 258 401-664 4-293 (317)
90 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.9E-43 9.7E-48 372.5 14.8 249 401-664 22-280 (353)
91 1ob3_A PFPK5, cell division co 100.0 1.6E-42 5.5E-47 356.8 19.9 254 402-664 2-280 (288)
92 3o0g_A Cell division protein k 100.0 1.8E-42 6.1E-47 357.2 20.1 254 402-664 2-282 (292)
93 1mqb_A Ephrin type-A receptor 100.0 1.4E-42 4.9E-47 364.9 19.8 258 402-671 44-309 (333)
94 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-42 5.4E-47 361.7 19.9 245 402-664 6-258 (318)
95 3v8s_A RHO-associated protein 100.0 2.1E-43 7.1E-48 380.1 13.5 260 394-664 61-329 (410)
96 3op5_A Serine/threonine-protei 100.0 2.4E-43 8.4E-48 375.5 13.8 263 400-671 33-329 (364)
97 1u59_A Tyrosine-protein kinase 100.0 7.2E-43 2.5E-47 359.2 16.8 258 402-672 9-273 (287)
98 3f66_A Hepatocyte growth facto 100.0 2E-42 6.9E-47 357.7 20.3 261 401-672 24-292 (298)
99 2izr_A Casein kinase I isoform 100.0 6.9E-43 2.4E-47 366.9 17.0 258 402-671 9-281 (330)
100 4dc2_A Protein kinase C IOTA t 100.0 9.9E-43 3.4E-47 372.8 18.4 248 401-659 51-307 (396)
101 3lzb_A Epidermal growth factor 100.0 9.5E-43 3.3E-47 365.3 17.8 258 401-671 14-278 (327)
102 4fvq_A Tyrosine-protein kinase 100.0 3.9E-43 1.3E-47 361.4 14.6 253 401-672 7-276 (289)
103 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.4E-43 2.9E-47 366.1 17.3 246 402-664 9-258 (336)
104 2w4o_A Calcium/calmodulin-depe 100.0 1.7E-42 5.8E-47 366.6 19.6 251 400-664 51-305 (349)
105 3is5_A Calcium-dependent prote 100.0 2.5E-42 8.5E-47 354.9 20.1 253 402-664 22-278 (285)
106 1csn_A Casein kinase-1; phosph 100.0 1.1E-42 3.7E-47 359.6 17.3 259 401-671 9-283 (298)
107 2vd5_A DMPK protein; serine/th 100.0 2.4E-43 8.4E-48 379.8 12.9 265 391-664 50-327 (412)
108 1p4o_A Insulin-like growth fac 100.0 4E-43 1.4E-47 367.2 14.0 268 395-671 18-299 (322)
109 1xjd_A Protein kinase C, theta 100.0 6.6E-43 2.3E-47 368.3 15.4 251 398-663 13-268 (345)
110 1kob_A Twitchin; kinase, intra 100.0 2.5E-42 8.4E-47 369.6 20.1 252 401-664 50-304 (387)
111 3gxj_A TGF-beta receptor type- 100.0 8.3E-44 2.9E-48 368.7 8.2 258 402-671 3-297 (303)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.2E-42 7.4E-47 365.5 18.9 245 402-664 41-293 (350)
113 3brb_A Proto-oncogene tyrosine 100.0 1.3E-42 4.5E-47 361.8 16.9 272 393-671 25-308 (313)
114 1fvr_A Tyrosine-protein kinase 100.0 2.1E-42 7.3E-47 362.6 18.6 260 402-672 25-301 (327)
115 2h34_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46 358.4 19.5 260 401-671 33-296 (309)
116 3pls_A Macrophage-stimulating 100.0 4.6E-42 1.6E-46 354.9 20.5 259 403-671 22-287 (298)
117 2w5a_A Serine/threonine-protei 100.0 1E-42 3.4E-47 356.4 15.0 259 401-667 5-270 (279)
118 3hko_A Calcium/calmodulin-depe 100.0 2.5E-42 8.4E-47 364.8 18.4 262 397-664 21-330 (345)
119 3a62_A Ribosomal protein S6 ki 100.0 3.6E-42 1.2E-46 360.9 19.4 249 401-664 16-276 (327)
120 3g2f_A Bone morphogenetic prot 100.0 2E-42 6.8E-47 364.2 17.4 262 401-672 12-319 (336)
121 4fr4_A YANK1, serine/threonine 100.0 3.1E-42 1.1E-46 367.7 19.0 250 402-664 15-271 (384)
122 2i1m_A Macrophage colony-stimu 100.0 1.2E-42 4.2E-47 365.3 15.7 265 399-671 43-326 (333)
123 2x4f_A Myosin light chain kina 100.0 2.7E-42 9.2E-47 368.1 18.5 248 405-664 92-342 (373)
124 2i0e_A Protein kinase C-beta I 100.0 2.8E-42 9.5E-47 364.7 18.0 250 400-664 18-276 (353)
125 3a8x_A Protein kinase C IOTA t 100.0 5.8E-42 2E-46 361.6 20.4 247 402-659 9-264 (345)
126 2wqm_A Serine/threonine-protei 100.0 7.5E-42 2.6E-46 355.6 21.0 263 402-671 32-297 (310)
127 2buj_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46 359.5 18.2 265 401-671 28-306 (317)
128 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-42 5.7E-47 363.3 15.8 265 401-671 40-322 (326)
129 3ork_A Serine/threonine protei 100.0 1E-42 3.5E-47 362.5 14.1 261 401-669 11-279 (311)
130 3dbq_A Dual specificity protei 100.0 2.7E-42 9.2E-47 364.4 17.5 252 401-665 8-274 (343)
131 2v62_A Serine/threonine-protei 100.0 9E-43 3.1E-47 368.3 13.7 262 401-669 36-326 (345)
132 1xbb_A Tyrosine-protein kinase 100.0 1.2E-42 4.2E-47 358.2 14.0 258 400-671 14-279 (291)
133 1byg_A CSK, protein (C-termina 100.0 3.7E-42 1.3E-46 352.1 17.3 253 401-671 20-273 (278)
134 2r5t_A Serine/threonine-protei 100.0 2.9E-42 9.8E-47 367.2 16.9 248 401-663 37-288 (373)
135 4ejn_A RAC-alpha serine/threon 100.0 2.4E-42 8.1E-47 378.0 16.7 249 401-664 147-404 (446)
136 3g33_A Cell division protein k 100.0 1.5E-41 5.1E-46 353.1 21.8 258 400-664 7-296 (308)
137 3p1a_A MYT1 kinase, membrane-a 100.0 4.2E-42 1.4E-46 357.8 17.5 245 402-664 57-304 (311)
138 2zmd_A Dual specificity protei 100.0 5.1E-42 1.8E-46 368.3 18.7 250 402-664 56-320 (390)
139 4fl3_A Tyrosine-protein kinase 100.0 3.4E-42 1.2E-46 391.2 18.0 250 408-671 375-631 (635)
140 2a2a_A Death-associated protei 100.0 8.5E-42 2.9E-46 357.2 19.6 252 401-664 11-272 (321)
141 3gni_B Strad alpha; kinase fol 100.0 7.7E-42 2.6E-46 367.3 19.7 258 401-664 24-333 (389)
142 2eue_A Carbon catabolite derep 100.0 8E-42 2.8E-46 349.0 18.8 246 402-664 13-262 (275)
143 1u5q_A Serine/threonine protei 100.0 8.9E-42 3E-46 360.7 19.5 247 401-664 53-305 (348)
144 1b6c_B TGF-B superfamily recep 100.0 2E-41 6.7E-46 357.4 21.2 263 398-672 38-337 (342)
145 3kk8_A Calcium/calmodulin depe 100.0 1.7E-41 5.9E-46 348.1 20.0 252 401-664 5-261 (284)
146 1nxk_A MAP kinase-activated pr 100.0 9E-42 3.1E-46 367.5 18.6 251 403-665 62-322 (400)
147 3dls_A PAS domain-containing s 100.0 1.3E-41 4.4E-46 357.8 19.3 244 400-665 22-275 (335)
148 3fdn_A Serine/threonine-protei 100.0 9.2E-42 3.1E-46 349.4 17.7 248 401-665 8-258 (279)
149 2y94_A 5'-AMP-activated protei 100.0 1.2E-41 3.9E-46 373.1 19.6 247 402-664 16-266 (476)
150 2yfx_A Tyrosine-protein kinase 100.0 8.2E-42 2.8E-46 358.2 17.7 262 401-671 29-304 (327)
151 2yex_A Serine/threonine-protei 100.0 1.8E-41 6.2E-46 346.3 19.7 253 401-664 6-261 (276)
152 3oz6_A Mitogen-activated prote 100.0 6.1E-42 2.1E-46 368.0 17.0 258 400-665 7-329 (388)
153 3eqc_A Dual specificity mitoge 100.0 6.3E-42 2.2E-46 364.1 16.9 254 401-664 32-324 (360)
154 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-41 3.9E-46 348.3 18.0 252 401-670 8-269 (277)
155 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.3E-42 2.5E-46 378.9 17.8 252 401-659 184-438 (543)
156 1vzo_A Ribosomal protein S6 ki 100.0 3.8E-42 1.3E-46 364.9 14.9 255 401-665 53-322 (355)
157 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.7E-41 5.8E-46 361.5 19.9 254 400-671 63-339 (365)
158 3uzp_A CKI-delta, CKID, casein 100.0 5.8E-42 2E-46 353.7 15.7 260 401-671 8-280 (296)
159 3ttj_A Mitogen-activated prote 100.0 1.6E-41 5.5E-46 372.2 20.1 253 401-664 61-355 (464)
160 4hgt_A Casein kinase I isoform 100.0 5.1E-42 1.7E-46 354.1 15.0 261 400-671 7-280 (296)
161 2a19_B Interferon-induced, dou 100.0 1.4E-41 4.9E-46 348.5 18.0 251 400-671 9-274 (284)
162 2jam_A Calcium/calmodulin-depe 100.0 3.5E-41 1.2E-45 349.6 20.9 250 401-664 8-261 (304)
163 3kn6_A Ribosomal protein S6 ki 100.0 6.3E-42 2.2E-46 358.6 15.4 245 407-664 16-270 (325)
164 3i6u_A CDS1, serine/threonine- 100.0 1.1E-41 3.9E-46 369.2 17.9 254 399-664 132-399 (419)
165 2jii_A Serine/threonine-protei 100.0 4.6E-42 1.6E-46 364.0 14.4 259 401-671 41-336 (352)
166 3a7i_A MST3 kinase, serine/thr 100.0 2.8E-41 9.7E-46 350.1 19.8 250 401-665 21-271 (303)
167 1t4h_A Serine/threonine-protei 100.0 4E-41 1.4E-45 346.6 20.2 251 403-664 27-282 (290)
168 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-41 6.6E-46 355.7 18.0 255 400-664 32-318 (329)
169 3llt_A Serine/threonine kinase 100.0 6.4E-42 2.2E-46 364.0 14.6 260 391-664 24-355 (360)
170 3bhy_A Death-associated protei 100.0 2.5E-41 8.5E-46 346.7 18.4 251 402-664 5-265 (283)
171 2acx_A G protein-coupled recep 100.0 8.4E-42 2.9E-46 379.2 15.9 254 401-664 183-444 (576)
172 3mtl_A Cell division protein k 100.0 6.5E-42 2.2E-46 358.5 14.1 254 402-664 2-281 (324)
173 3rp9_A Mitogen-activated prote 100.0 4.2E-41 1.4E-45 369.5 21.0 196 402-604 53-280 (458)
174 3cok_A Serine/threonine-protei 100.0 2.2E-41 7.5E-46 346.3 17.1 250 401-664 10-262 (278)
175 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-41 7E-46 347.8 16.7 248 400-664 9-279 (289)
176 3pg1_A Mitogen-activated prote 100.0 1.4E-41 4.9E-46 361.5 16.1 266 391-664 11-316 (362)
177 4agu_A Cyclin-dependent kinase 100.0 6.3E-41 2.2E-45 348.7 20.5 254 402-664 3-284 (311)
178 3eb0_A Putative uncharacterize 100.0 1.8E-41 6.3E-46 363.5 16.9 257 398-664 3-321 (383)
179 3an0_A Dual specificity mitoge 100.0 2.1E-41 7.2E-46 357.1 16.9 256 400-664 49-310 (340)
180 2j0j_A Focal adhesion kinase 1 100.0 1.6E-41 5.5E-46 387.0 17.1 261 398-671 386-651 (656)
181 2qr7_A Ribosomal protein S6 ki 100.0 9.3E-42 3.2E-46 359.6 13.9 249 401-664 21-277 (342)
182 2ac3_A MAP kinase-interacting 100.0 2.5E-41 8.4E-46 352.6 17.0 252 402-664 12-295 (316)
183 3mi9_A Cell division protein k 100.0 1E-40 3.5E-45 353.4 21.7 257 402-664 17-311 (351)
184 2vgo_A Serine/threonine-protei 100.0 5E-41 1.7E-45 344.9 18.6 246 402-664 14-262 (284)
185 3ll6_A Cyclin G-associated kin 100.0 3.9E-41 1.3E-45 354.0 18.2 260 401-671 27-308 (337)
186 1ua2_A CAK, cell division prot 100.0 4.8E-41 1.6E-45 355.3 18.8 258 398-664 6-291 (346)
187 2x7f_A TRAF2 and NCK-interacti 100.0 3.9E-41 1.3E-45 352.7 17.3 260 394-664 16-286 (326)
188 2rku_A Serine/threonine-protei 100.0 5.4E-41 1.9E-45 346.4 18.1 249 401-664 14-265 (294)
189 3mwu_A Calmodulin-domain prote 100.0 9.7E-41 3.3E-45 369.3 21.0 251 401-664 21-276 (486)
190 3fme_A Dual specificity mitoge 100.0 2.9E-41 9.9E-46 347.5 15.6 255 401-664 6-266 (290)
191 3nyv_A Calmodulin-domain prote 100.0 5.8E-41 2E-45 371.1 19.1 251 401-664 25-281 (484)
192 3byv_A Rhoptry kinase; malaria 100.0 2.8E-42 9.6E-47 369.1 8.2 246 401-664 72-359 (377)
193 1u46_A ACK-1, activated CDC42 100.0 3.8E-41 1.3E-45 346.8 16.1 259 401-671 17-284 (291)
194 3lm5_A Serine/threonine-protei 100.0 5.1E-41 1.7E-45 352.2 17.3 257 398-664 24-287 (327)
195 2owb_A Serine/threonine-protei 100.0 5.4E-41 1.8E-45 353.2 17.5 249 401-664 40-291 (335)
196 3lij_A Calcium/calmodulin depe 100.0 1.1E-40 3.9E-45 369.4 20.5 251 401-664 36-291 (494)
197 3nsz_A CK II alpha, casein kin 100.0 1.2E-40 4.1E-45 349.6 19.7 248 402-664 36-319 (330)
198 1cm8_A Phosphorylated MAP kina 100.0 7.2E-41 2.5E-45 356.5 18.2 252 401-664 24-307 (367)
199 2y7j_A Phosphorylase B kinase 100.0 1.2E-40 4.1E-45 354.6 19.8 258 395-664 87-359 (365)
200 2clq_A Mitogen-activated prote 100.0 1.7E-40 5.7E-45 342.7 20.2 252 403-664 23-278 (295)
201 2h6d_A 5'-AMP-activated protei 100.0 1.1E-40 3.9E-45 340.5 18.7 248 402-665 11-262 (276)
202 4aaa_A Cyclin-dependent kinase 100.0 3.8E-41 1.3E-45 353.8 15.5 254 402-664 25-306 (331)
203 3pfq_A PKC-B, PKC-beta, protei 100.0 7.9E-41 2.7E-45 382.5 19.2 249 400-663 339-596 (674)
204 2vwi_A Serine/threonine-protei 100.0 2E-41 7E-46 350.8 12.9 261 399-664 12-287 (303)
205 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-41 5.3E-46 362.6 12.3 254 401-664 61-352 (371)
206 1zy4_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 343.7 19.6 253 401-664 5-283 (303)
207 2xrw_A Mitogen-activated prote 100.0 1.7E-40 5.8E-45 354.4 20.2 253 401-664 24-318 (371)
208 2j7t_A Serine/threonine-protei 100.0 9.2E-41 3.2E-45 345.9 17.7 252 401-664 18-275 (302)
209 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-40 3.8E-45 370.4 19.5 251 401-664 35-301 (504)
210 3n9x_A Phosphotransferase; mal 100.0 7.4E-41 2.5E-45 364.4 17.7 201 401-608 25-252 (432)
211 3com_A Serine/threonine-protei 100.0 2.7E-40 9.2E-45 344.4 20.2 251 400-664 27-278 (314)
212 2r3i_A Cell division protein k 100.0 4.2E-40 1.4E-44 340.4 21.2 255 402-664 3-283 (299)
213 3e3p_A Protein kinase, putativ 100.0 2.3E-40 7.8E-45 351.9 19.5 265 395-664 16-314 (360)
214 1j1b_A Glycogen synthase kinas 100.0 8E-41 2.7E-45 362.6 16.2 253 402-664 54-336 (420)
215 3qyz_A Mitogen-activated prote 100.0 8.4E-41 2.9E-45 355.9 15.7 256 401-664 26-313 (364)
216 2pml_X PFPK7, Ser/Thr protein 100.0 1.5E-40 5E-45 351.7 17.4 251 401-664 30-322 (348)
217 2wtk_C Serine/threonine-protei 100.0 3.2E-40 1.1E-44 342.4 19.5 254 401-665 4-264 (305)
218 2ycf_A Serine/threonine-protei 100.0 9.9E-41 3.4E-45 349.2 15.8 252 401-664 9-274 (322)
219 3rgf_A Cyclin-dependent kinase 100.0 1.1E-40 3.8E-45 360.2 16.6 257 402-664 20-333 (405)
220 3aln_A Dual specificity mitoge 100.0 1.1E-40 3.9E-45 349.5 15.8 258 401-664 21-285 (327)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-40 3.9E-45 348.0 15.2 263 395-671 26-302 (319)
222 3kvw_A DYRK2, dual specificity 100.0 1.6E-40 5.4E-45 361.2 16.5 251 401-664 96-408 (429)
223 1phk_A Phosphorylase kinase; g 100.0 6.1E-40 2.1E-44 339.0 19.9 252 401-664 16-283 (298)
224 3sv0_A Casein kinase I-like; t 100.0 1.4E-40 4.8E-45 365.1 16.0 259 401-671 6-278 (483)
225 4e7w_A Glycogen synthase kinas 100.0 1.3E-40 4.5E-45 358.0 15.2 253 402-664 40-321 (394)
226 2b9h_A MAP kinase FUS3, mitoge 100.0 3.6E-40 1.2E-44 349.4 17.9 256 401-664 10-305 (353)
227 1blx_A Cyclin-dependent kinase 100.0 5.9E-40 2E-44 343.7 19.2 258 400-664 9-296 (326)
228 2fst_X Mitogen-activated prote 100.0 1.5E-40 5E-45 353.9 14.3 252 401-664 28-311 (367)
229 3cek_A Dual specificity protei 100.0 6.2E-40 2.1E-44 341.7 17.5 255 397-664 23-292 (313)
230 2vx3_A Dual specificity tyrosi 100.0 1.6E-39 5.6E-44 348.3 21.0 201 400-611 52-261 (382)
231 2i6l_A Mitogen-activated prote 100.0 4.9E-40 1.7E-44 343.0 16.2 254 402-664 11-305 (320)
232 2wei_A Calmodulin-domain prote 100.0 1.1E-39 3.8E-44 335.3 17.9 252 400-664 20-276 (287)
233 1wak_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 353.0 16.4 254 401-664 36-391 (397)
234 4exu_A Mitogen-activated prote 100.0 1.1E-39 3.6E-44 348.3 17.7 251 401-664 41-323 (371)
235 1z57_A Dual specificity protei 100.0 1.5E-39 5.2E-44 342.0 18.3 249 402-664 14-328 (339)
236 3coi_A Mitogen-activated prote 100.0 2.8E-39 9.6E-44 342.7 19.9 250 402-664 24-305 (353)
237 3fhr_A MAP kinase-activated pr 100.0 1.6E-39 5.3E-44 342.1 17.0 252 401-664 27-287 (336)
238 2rio_A Serine/threonine-protei 100.0 2E-39 6.8E-44 353.2 18.2 251 403-664 16-295 (434)
239 3a99_A Proto-oncogene serine/t 100.0 8.7E-40 3E-44 341.7 13.8 247 395-664 36-293 (320)
240 2iwi_A Serine/threonine-protei 100.0 2.5E-39 8.4E-44 336.9 14.6 246 396-664 25-283 (312)
241 1q8y_A SR protein kinase; tran 100.0 4.7E-39 1.6E-43 343.4 17.0 253 402-664 19-333 (373)
242 2eu9_A Dual specificity protei 100.0 8.7E-39 3E-43 338.6 18.3 250 401-664 18-333 (355)
243 2dyl_A Dual specificity mitoge 100.0 9.2E-39 3.2E-43 333.3 17.8 253 401-664 24-283 (318)
244 3qa8_A MGC80376 protein; kinas 100.0 3.3E-39 1.1E-43 361.8 15.4 265 402-671 14-309 (676)
245 3p23_A Serine/threonine-protei 100.0 1.2E-38 4E-43 346.3 17.5 249 401-664 23-283 (432)
246 3uqc_A Probable conserved tran 100.0 3.9E-38 1.3E-42 323.5 17.6 230 402-671 31-265 (286)
247 2pzi_A Probable serine/threoni 100.0 3E-38 1E-42 363.3 16.7 242 402-670 80-327 (681)
248 3dzo_A Rhoptry kinase domain; 100.0 4.2E-38 1.4E-42 340.5 13.2 246 400-663 76-362 (413)
249 3m2w_A MAP kinase-activated pr 100.0 3.1E-37 1.1E-41 319.2 18.0 228 402-664 17-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 8.4E-37 2.9E-41 321.3 16.4 243 401-663 19-329 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 3.4E-31 1.2E-35 275.5 14.6 213 18-233 2-221 (313)
252 4azs_A Methyltransferase WBDD; 100.0 7.1E-31 2.4E-35 293.9 2.5 185 409-606 241-436 (569)
253 4eco_A Uncharacterized protein 99.9 3.5E-28 1.2E-32 277.3 10.3 207 20-232 28-352 (636)
254 3rgz_A Protein brassinosteroid 99.9 2E-27 6.9E-32 277.1 14.8 212 14-233 4-247 (768)
255 4ecn_A Leucine-rich repeat pro 99.9 1.2E-27 4.1E-32 278.3 10.2 203 19-232 266-594 (876)
256 3en9_A Glycoprotease, O-sialog 99.9 1.9E-27 6.4E-32 264.7 7.5 185 405-608 339-538 (540)
257 4fcg_A Uncharacterized protein 99.9 3.4E-26 1.2E-30 239.2 10.1 207 19-233 24-253 (328)
258 3rgz_A Protein brassinosteroid 99.9 1.3E-24 4.6E-29 253.3 13.4 112 137-249 632-745 (768)
259 1zar_A RIO2 kinase; serine kin 99.9 2.2E-24 7.4E-29 220.2 7.7 155 393-581 81-252 (282)
260 1ogq_A PGIP-2, polygalacturona 99.9 8.5E-24 2.9E-28 219.6 10.3 167 65-233 101-268 (313)
261 3m19_A Variable lymphocyte rec 99.9 1.9E-22 6.5E-27 202.5 17.3 160 65-224 35-194 (251)
262 2o6q_A Variable lymphocyte rec 99.9 2.5E-22 8.6E-27 203.9 18.1 193 55-247 17-221 (270)
263 3m19_A Variable lymphocyte rec 99.9 2.7E-22 9.3E-27 201.4 15.2 187 55-246 6-194 (251)
264 2o6s_A Variable lymphocyte rec 99.9 2.2E-22 7.4E-27 196.0 11.0 171 55-232 8-188 (208)
265 2o6q_A Variable lymphocyte rec 99.9 1.3E-21 4.4E-26 198.7 14.7 180 48-233 2-181 (270)
266 4fcg_A Uncharacterized protein 99.9 7.7E-22 2.6E-26 206.2 12.8 166 65-234 104-278 (328)
267 1ozn_A Reticulon 4 receptor; N 99.9 2.1E-21 7.2E-26 198.7 15.7 169 65-233 32-201 (285)
268 1ozn_A Reticulon 4 receptor; N 99.9 2E-21 7E-26 198.8 15.6 184 65-248 56-242 (285)
269 3e6j_A Variable lymphocyte rec 99.9 2.7E-21 9.3E-26 191.2 15.9 166 43-226 11-176 (229)
270 1p9a_G Platelet glycoprotein I 99.9 3E-21 1E-25 198.0 16.4 181 65-249 31-213 (290)
271 2v70_A SLIT-2, SLIT homolog 2 99.8 7.4E-21 2.5E-25 186.8 14.4 155 69-226 15-170 (220)
272 3rfs_A Internalin B, repeat mo 99.8 1.3E-20 4.3E-25 191.6 16.4 160 65-226 63-222 (272)
273 2v9t_B SLIT homolog 2 protein 99.8 1.6E-20 5.5E-25 184.4 14.9 152 70-224 16-167 (220)
274 3zyi_A Leucine-rich repeat-con 99.8 1.6E-20 5.4E-25 205.4 15.3 173 55-229 55-262 (452)
275 3rfs_A Internalin B, repeat mo 99.8 5.7E-20 1.9E-24 186.7 17.3 178 65-246 41-220 (272)
276 2z62_A TOLL-like receptor 4, v 99.8 1.4E-20 4.6E-25 191.7 12.3 165 65-229 28-197 (276)
277 3zyj_A Leucine-rich repeat-con 99.8 4.3E-20 1.5E-24 201.1 15.6 195 55-249 44-297 (440)
278 2z66_A Variable lymphocyte rec 99.8 1.9E-20 6.3E-25 193.7 11.0 180 66-246 79-263 (306)
279 2z66_A Variable lymphocyte rec 99.8 2.8E-20 9.6E-25 192.4 12.3 178 55-233 8-199 (306)
280 2z80_A TOLL-like receptor 2, v 99.8 2.1E-20 7.1E-25 197.5 10.2 181 43-228 22-216 (353)
281 2id5_A Lingo-1, leucine rich r 99.8 4.9E-20 1.7E-24 202.9 13.4 178 55-232 12-199 (477)
282 2xot_A Amphoterin-induced prot 99.8 1.5E-19 5.2E-24 191.5 16.3 177 69-248 22-206 (361)
283 3v47_A TOLL-like receptor 5B a 99.8 2.9E-20 9.9E-25 203.3 10.0 152 57-208 13-177 (455)
284 2o6s_A Variable lymphocyte rec 99.8 3.7E-19 1.3E-23 173.0 16.5 162 58-226 4-165 (208)
285 3j0a_A TOLL-like receptor 5; m 99.8 1.8E-19 6.1E-24 212.2 15.8 163 65-227 290-522 (844)
286 3oja_B Anopheles plasmodium-re 99.8 2E-19 6.8E-24 203.6 14.6 161 40-200 8-186 (597)
287 1zth_A RIO1 serine protein kin 99.8 1E-19 3.6E-24 183.2 10.7 147 395-558 40-220 (258)
288 3vq2_A TLR4, TOLL-like recepto 99.8 8.8E-20 3E-24 207.1 11.3 183 66-250 377-564 (606)
289 4g8a_A TOLL-like receptor 4; l 99.8 2.1E-19 7E-24 204.7 14.2 157 73-232 39-196 (635)
290 3v47_A TOLL-like receptor 5B a 99.8 1.2E-19 4.1E-24 198.5 11.5 162 65-226 212-412 (455)
291 2xwt_C Thyrotropin receptor; s 99.8 1E-19 3.5E-24 181.1 9.9 172 58-232 17-203 (239)
292 2xot_A Amphoterin-induced prot 99.8 8.1E-20 2.8E-24 193.5 9.7 170 55-224 19-204 (361)
293 2v9t_B SLIT homolog 2 protein 99.8 3.4E-19 1.2E-23 174.9 13.2 145 55-199 12-166 (220)
294 2ft3_A Biglycan; proteoglycan, 99.8 6.6E-19 2.2E-23 184.3 16.2 169 55-230 34-214 (332)
295 3j0a_A TOLL-like receptor 5; m 99.8 1.3E-19 4.5E-24 213.3 11.5 180 50-230 10-195 (844)
296 2v70_A SLIT-2, SLIT homolog 2 99.8 3.5E-19 1.2E-23 174.8 12.6 148 55-202 12-170 (220)
297 4g8a_A TOLL-like receptor 4; l 99.8 1.8E-19 6.1E-24 205.3 11.9 166 65-230 52-222 (635)
298 3vq2_A TLR4, TOLL-like recepto 99.8 1.9E-19 6.6E-24 204.3 11.9 166 65-230 32-202 (606)
299 1wwl_A Monocyte differentiatio 99.8 7.1E-20 2.4E-24 189.9 7.4 163 65-229 95-272 (312)
300 3t6q_A CD180 antigen; protein- 99.8 4.9E-19 1.7E-23 200.9 14.5 181 66-247 377-563 (606)
301 2z81_A CD282 antigen, TOLL-lik 99.8 1.6E-19 5.3E-24 202.5 10.1 163 65-228 26-190 (549)
302 3t6q_A CD180 antigen; protein- 99.8 3.1E-19 1.1E-23 202.5 12.2 175 56-230 14-200 (606)
303 3o6n_A APL1; leucine-rich repe 99.8 6.3E-19 2.2E-23 188.8 13.7 160 41-200 3-180 (390)
304 1p9a_G Platelet glycoprotein I 99.8 9E-19 3.1E-23 179.5 14.3 164 63-232 8-171 (290)
305 1ziw_A TOLL-like receptor 3; i 99.8 4.5E-19 1.5E-23 204.1 13.0 169 64-232 24-194 (680)
306 4eco_A Uncharacterized protein 99.8 8.2E-20 2.8E-24 208.1 6.2 163 65-231 206-398 (636)
307 2z62_A TOLL-like receptor 4, v 99.8 1.4E-18 4.7E-23 176.8 14.1 182 65-247 52-240 (276)
308 1xku_A Decorin; proteoglycan, 99.8 2E-18 6.9E-23 180.4 15.7 172 55-232 32-215 (330)
309 4ezg_A Putative uncharacterize 99.8 9.3E-19 3.2E-23 168.7 11.5 152 65-223 44-195 (197)
310 2z63_A TOLL-like receptor 4, v 99.8 7.2E-19 2.4E-23 197.9 11.7 168 64-231 27-199 (570)
311 3oja_A Leucine-rich immune mol 99.8 3.3E-19 1.1E-23 196.4 7.9 159 66-232 35-213 (487)
312 4ecn_A Leucine-rich repeat pro 99.8 3.6E-19 1.2E-23 207.1 8.5 162 65-231 448-640 (876)
313 2id5_A Lingo-1, leucine rich r 99.8 1.3E-18 4.3E-23 191.6 12.0 165 65-229 56-220 (477)
314 4glp_A Monocyte differentiatio 99.8 7.4E-19 2.5E-23 182.1 9.4 162 66-229 92-270 (310)
315 1ziw_A TOLL-like receptor 3; i 99.8 4.4E-18 1.5E-22 195.7 16.7 184 65-248 405-626 (680)
316 3oja_B Anopheles plasmodium-re 99.8 2.4E-18 8.2E-23 194.7 13.6 167 65-233 75-278 (597)
317 1w8a_A SLIT protein; signaling 99.8 2.8E-18 9.7E-23 164.6 12.1 113 114-226 30-143 (192)
318 2xwt_C Thyrotropin receptor; s 99.8 1.3E-18 4.4E-23 173.1 10.0 163 65-230 55-226 (239)
319 1wwl_A Monocyte differentiatio 99.8 5.3E-19 1.8E-23 183.3 7.1 163 64-232 120-295 (312)
320 2ft3_A Biglycan; proteoglycan, 99.8 8.5E-18 2.9E-22 175.8 16.1 161 65-232 78-240 (332)
321 3e6j_A Variable lymphocyte rec 99.8 5.7E-18 2E-22 167.2 13.8 152 49-201 24-175 (229)
322 3zyi_A Leucine-rich repeat-con 99.7 6E-18 2.1E-22 184.8 13.9 184 65-250 99-309 (452)
323 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 6.3E-18 2.1E-22 190.0 13.7 158 86-247 350-513 (562)
324 2z63_A TOLL-like receptor 4, v 99.7 3.5E-18 1.2E-22 192.3 11.4 182 65-247 347-534 (570)
325 2z7x_B TOLL-like receptor 1, v 99.7 4E-18 1.4E-22 189.7 11.7 138 86-227 321-461 (520)
326 3zyj_A Leucine-rich repeat-con 99.7 7.3E-18 2.5E-22 183.5 13.5 158 66-223 89-293 (440)
327 2z80_A TOLL-like receptor 2, v 99.7 1.6E-18 5.4E-23 183.1 7.6 165 65-229 76-242 (353)
328 4b8c_D Glucose-repressible alc 99.7 1.3E-18 4.4E-23 200.5 7.4 202 21-231 131-338 (727)
329 3o6n_A APL1; leucine-rich repe 99.7 1.3E-17 4.4E-22 178.5 14.5 167 65-233 69-272 (390)
330 2z7x_B TOLL-like receptor 1, v 99.7 7.1E-18 2.4E-22 187.7 12.4 160 64-226 323-485 (520)
331 4glp_A Monocyte differentiatio 99.7 2.2E-18 7.4E-23 178.6 7.6 155 65-223 117-286 (310)
332 1xku_A Decorin; proteoglycan, 99.7 1.1E-17 3.7E-22 174.8 13.0 161 65-232 100-262 (330)
333 1w8a_A SLIT protein; signaling 99.7 1.1E-17 3.9E-22 160.3 11.3 131 69-202 12-143 (192)
334 2z81_A CD282 antigen, TOLL-lik 99.7 7.4E-18 2.5E-22 188.8 11.5 165 56-233 6-172 (549)
335 3cvr_A Invasion plasmid antige 99.7 3.8E-18 1.3E-22 189.8 8.6 162 41-227 33-197 (571)
336 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 1.4E-17 4.8E-22 187.2 12.6 162 63-227 351-515 (562)
337 3o53_A Protein LRIM1, AGAP0063 99.7 2.1E-18 7.1E-23 179.3 4.7 148 65-224 58-206 (317)
338 2ell_A Acidic leucine-rich nuc 99.7 1.9E-17 6.6E-22 155.0 9.2 133 88-222 23-160 (168)
339 1h6u_A Internalin H; cell adhe 99.7 5.9E-17 2E-21 167.5 13.8 148 65-224 63-210 (308)
340 3oja_A Leucine-rich immune mol 99.7 7.8E-18 2.7E-22 185.4 7.2 172 64-247 79-253 (487)
341 1h6t_A Internalin B; cell adhe 99.7 8.9E-17 3E-21 164.7 14.4 147 65-223 46-192 (291)
342 2je0_A Acidic leucine-rich nuc 99.7 1.7E-17 5.9E-22 152.0 7.5 129 88-218 16-149 (149)
343 2wfh_A SLIT homolog 2 protein 99.7 1.3E-16 4.5E-21 153.0 12.8 110 114-224 32-141 (193)
344 2ell_A Acidic leucine-rich nuc 99.7 4.8E-17 1.6E-21 152.3 9.5 136 65-203 24-164 (168)
345 1h6t_A Internalin B; cell adhe 99.7 8.7E-17 3E-21 164.8 12.2 148 65-224 68-215 (291)
346 1h6u_A Internalin H; cell adhe 99.7 1.6E-16 5.6E-21 164.1 14.1 150 65-226 41-190 (308)
347 3o53_A Protein LRIM1, AGAP0063 99.7 2.1E-17 7.1E-22 171.7 7.1 139 88-230 119-259 (317)
348 2o6r_A Variable lymphocyte rec 99.7 1.9E-16 6.5E-21 149.6 13.1 114 89-226 28-141 (177)
349 3cvr_A Invasion plasmid antige 99.7 1.1E-16 3.6E-21 178.2 12.8 147 66-233 101-254 (571)
350 4b8c_D Glucose-repressible alc 99.7 4.4E-18 1.5E-22 196.0 1.7 164 66-233 192-365 (727)
351 2o6r_A Variable lymphocyte rec 99.7 2.2E-16 7.5E-21 149.2 12.3 124 55-178 8-141 (177)
352 4gyi_A RIO2 kinase; protein ki 99.7 1.6E-17 5.5E-22 173.8 4.8 147 395-557 88-265 (397)
353 2je0_A Acidic leucine-rich nuc 99.7 5.5E-17 1.9E-21 148.6 7.4 128 65-194 17-149 (149)
354 1xeu_A Internalin C; cellular 99.7 1.8E-16 6.2E-21 159.9 11.5 147 65-224 41-187 (263)
355 1m9s_A Internalin B; cell inva 99.7 2.1E-16 7.1E-21 177.7 12.9 148 65-224 65-212 (605)
356 4ay9_X Follicle-stimulating ho 99.7 2.3E-16 8E-21 166.1 11.4 171 55-226 10-219 (350)
357 2wfh_A SLIT homolog 2 protein 99.7 5E-16 1.7E-20 148.9 12.3 127 69-199 14-140 (193)
358 4ezg_A Putative uncharacterize 99.6 3.1E-16 1E-20 151.0 10.1 136 84-224 39-174 (197)
359 1o6v_A Internalin A; bacterial 99.6 2.9E-16 9.8E-21 172.2 11.2 154 65-232 221-374 (466)
360 1m9s_A Internalin B; cell inva 99.6 4.7E-16 1.6E-20 174.8 13.2 154 65-232 43-196 (605)
361 4fmz_A Internalin; leucine ric 99.6 4.3E-16 1.5E-20 163.8 11.7 152 65-226 177-328 (347)
362 1dce_A Protein (RAB geranylger 99.6 5.4E-18 1.8E-22 189.5 -3.7 154 67-226 351-550 (567)
363 1o6v_A Internalin A; bacterial 99.6 1.3E-15 4.4E-20 167.0 14.3 154 65-232 199-352 (466)
364 4fmz_A Internalin; leucine ric 99.6 9.5E-16 3.3E-20 161.1 12.4 158 65-234 155-312 (347)
365 2ast_B S-phase kinase-associat 99.6 4.7E-17 1.6E-21 170.3 1.9 167 65-232 70-246 (336)
366 3bz5_A Internalin-J, INLJ; leu 99.6 4E-15 1.4E-19 162.3 16.3 150 57-223 77-226 (457)
367 1ds9_A Outer arm dynein; leuci 99.6 2.5E-18 8.5E-23 165.8 -9.6 131 67-202 20-157 (198)
368 3bz5_A Internalin-J, INLJ; leu 99.6 4.4E-15 1.5E-19 162.0 14.8 143 65-223 42-184 (457)
369 2ast_B S-phase kinase-associat 99.6 8.6E-17 3E-21 168.3 1.0 156 65-220 93-258 (336)
370 1xeu_A Internalin C; cellular 99.6 1.9E-15 6.6E-20 152.3 10.2 145 67-224 21-165 (263)
371 1a9n_A U2A', U2A'; complex (nu 99.6 6.8E-16 2.3E-20 145.7 6.3 133 84-222 14-153 (176)
372 1jl5_A Outer protein YOPM; leu 99.6 7.2E-16 2.5E-20 168.0 5.9 146 65-226 11-189 (454)
373 2ca6_A RAN GTPase-activating p 99.6 6.6E-17 2.3E-21 172.8 -3.0 159 66-224 61-259 (386)
374 2ca6_A RAN GTPase-activating p 99.6 2E-16 6.8E-21 169.0 0.1 169 65-233 32-244 (386)
375 3g06_A SSPH2 (leucine-rich rep 99.6 7.6E-15 2.6E-19 165.2 11.9 67 161-232 241-307 (622)
376 3goz_A Leucine-rich repeat-con 99.6 6E-16 2E-20 163.8 2.3 157 71-227 4-185 (362)
377 1jl5_A Outer protein YOPM; leu 99.6 2.1E-14 7.1E-19 156.5 14.2 141 65-223 111-251 (454)
378 1ds9_A Outer arm dynein; leuci 99.5 5.5E-17 1.9E-21 156.3 -5.8 138 85-227 14-158 (198)
379 3goz_A Leucine-rich repeat-con 99.5 4.2E-16 1.4E-20 165.0 0.2 160 65-224 22-211 (362)
380 1dce_A Protein (RAB geranylger 99.5 8.4E-15 2.9E-19 163.6 10.5 122 90-216 442-567 (567)
381 1a9n_A U2A', U2A'; complex (nu 99.5 8.7E-15 3E-19 138.0 7.6 129 65-199 19-154 (176)
382 3g06_A SSPH2 (leucine-rich rep 99.5 6.3E-15 2.1E-19 165.9 7.3 160 40-223 11-195 (622)
383 2r9u_A Variable lymphocyte rec 99.5 4.8E-14 1.6E-18 132.6 11.9 105 68-175 15-119 (174)
384 3g39_A Variable lymphocyte rec 99.5 4.6E-14 1.6E-18 132.2 11.0 90 137-226 30-119 (170)
385 3g39_A Variable lymphocyte rec 99.5 5.1E-14 1.8E-18 131.9 10.9 104 69-175 13-116 (170)
386 2r9u_A Variable lymphocyte rec 99.5 8.3E-14 2.8E-18 130.9 10.8 106 92-224 15-120 (174)
387 4ay9_X Follicle-stimulating ho 99.5 7.8E-14 2.7E-18 146.7 10.6 164 59-229 7-174 (350)
388 2ifg_A High affinity nerve gro 99.4 4.9E-13 1.7E-17 140.4 11.2 107 55-175 9-117 (347)
389 1z7x_W Ribonuclease inhibitor; 99.4 7.5E-15 2.6E-19 160.5 -3.6 165 65-229 170-361 (461)
390 1z7x_W Ribonuclease inhibitor; 99.4 9.6E-15 3.3E-19 159.6 -4.8 169 65-233 199-398 (461)
391 2ifg_A High affinity nerve gro 99.3 2.3E-12 8E-17 135.2 9.8 90 133-223 27-117 (347)
392 3un9_A NLR family member X1; l 99.3 5.6E-14 1.9E-18 148.7 -6.9 167 65-231 72-261 (372)
393 3sb4_A Hypothetical leucine ri 99.3 7.5E-12 2.6E-16 130.3 8.7 134 88-224 100-312 (329)
394 3tm0_A Aminoglycoside 3'-phosp 99.2 2.2E-11 7.4E-16 122.4 11.6 146 397-555 9-212 (263)
395 3sb4_A Hypothetical leucine ri 99.1 1E-10 3.6E-15 121.6 9.9 149 65-216 101-328 (329)
396 1nd4_A Aminoglycoside 3'-phosp 99.1 1.1E-10 3.7E-15 116.9 8.9 136 403-556 21-214 (264)
397 3dxp_A Putative acyl-COA dehyd 99.1 2.3E-10 7.8E-15 120.6 11.5 145 406-557 42-249 (359)
398 3un9_A NLR family member X1; l 99.0 6.6E-12 2.2E-16 132.8 -4.9 158 65-222 101-283 (372)
399 3ogk_B Coronatine-insensitive 99.0 1.3E-11 4.5E-16 139.2 -2.8 157 66-223 319-502 (592)
400 3ogk_B Coronatine-insensitive 98.9 1.1E-10 3.9E-15 131.4 -1.0 158 66-225 139-309 (592)
401 3rw6_A Nuclear RNA export fact 98.9 6E-12 2.1E-16 125.4 -10.5 117 55-174 79-209 (267)
402 3sg8_A APH(2'')-ID; antibiotic 98.8 1.5E-09 5.1E-14 111.5 4.3 187 407-608 25-287 (304)
403 2p1m_B Transport inhibitor res 98.7 1.3E-09 4.5E-14 122.8 -0.3 129 65-194 105-244 (594)
404 2p1m_B Transport inhibitor res 98.7 3.2E-10 1.1E-14 127.8 -5.8 156 65-222 314-494 (594)
405 4fdw_A Leucine rich hypothetic 98.7 5.3E-08 1.8E-12 103.8 11.0 149 65-219 180-333 (401)
406 2ra8_A Uncharacterized protein 98.6 5.5E-09 1.9E-13 109.5 2.0 162 66-230 140-328 (362)
407 4fdw_A Leucine rich hypothetic 98.6 1.2E-07 4E-12 101.1 12.1 145 67-217 159-308 (401)
408 3rw6_A Nuclear RNA export fact 98.6 4E-09 1.4E-13 105.0 -0.8 105 85-191 137-257 (267)
409 3r70_A Aminoglycoside phosphot 98.5 2.5E-07 8.5E-12 95.6 11.1 137 403-558 38-239 (320)
410 1io0_A Tropomodulin; LRR prote 98.5 7.3E-09 2.5E-13 98.0 -1.4 122 81-222 28-164 (185)
411 3d1u_A Putative fructosamine-3 98.5 5.8E-07 2E-11 91.1 11.2 142 405-555 18-215 (288)
412 2ra8_A Uncharacterized protein 98.5 2.9E-08 9.8E-13 104.0 1.5 159 64-225 106-295 (362)
413 1io0_A Tropomodulin; LRR prote 98.4 2.3E-08 8E-13 94.5 -0.4 99 107-225 30-139 (185)
414 3tdw_A Gentamicin resistance p 98.3 2.1E-06 7.2E-11 87.9 11.8 137 407-557 24-225 (306)
415 3ovc_A Hygromycin-B 4-O-kinase 98.2 3.2E-06 1.1E-10 88.6 10.3 147 404-558 43-245 (362)
416 4gkh_A Aminoglycoside 3'-phosp 98.2 5.3E-06 1.8E-10 83.1 11.3 134 409-556 31-223 (272)
417 3ats_A Putative uncharacterize 98.2 4.3E-06 1.5E-10 87.5 9.3 84 407-490 25-122 (357)
418 2q83_A YTAA protein; 2635576, 97.9 3.1E-05 1.1E-09 80.2 10.0 143 408-556 38-252 (346)
419 2olc_A MTR kinase, methylthior 97.8 5.3E-05 1.8E-09 80.4 10.6 76 407-486 35-120 (397)
420 4gt6_A Cell surface protein; l 97.7 9.4E-05 3.2E-09 78.4 9.0 109 107-219 259-367 (394)
421 3f7w_A Putative fructosamine-3 97.6 0.00011 3.8E-09 74.2 8.9 79 403-488 16-97 (288)
422 2pyw_A Uncharacterized protein 97.6 6.6E-05 2.2E-09 80.4 7.5 80 525-605 231-313 (420)
423 3jr1_A Putative fructosamine-3 97.6 0.0004 1.4E-08 70.8 11.7 139 406-552 40-232 (312)
424 4h09_A Hypothetical leucine ri 97.5 0.00029 9.8E-09 74.1 10.1 131 84-218 212-342 (379)
425 3e4g_A ATP synthase subunit S, 97.5 3.1E-05 1.1E-09 71.4 1.8 33 115-147 63-95 (176)
426 3e4g_A ATP synthase subunit S, 97.4 3.8E-05 1.3E-09 70.8 2.0 84 89-172 61-150 (176)
427 4fs7_A Uncharacterized protein 97.4 0.0004 1.4E-08 73.5 10.3 128 84-218 248-375 (394)
428 4h09_A Hypothetical leucine ri 97.4 0.00053 1.8E-08 72.0 10.3 125 81-209 232-356 (379)
429 4fs7_A Uncharacterized protein 97.3 0.00036 1.2E-08 73.9 7.8 63 83-147 65-127 (394)
430 4gt6_A Cell surface protein; l 97.2 0.00083 2.8E-08 71.0 9.0 87 130-219 258-344 (394)
431 2ppq_A HSK, HK, homoserine kin 97.1 0.0011 3.6E-08 68.0 9.3 161 392-556 7-217 (322)
432 3dxq_A Choline/ethanolamine ki 97.0 0.0018 6.2E-08 65.6 9.1 71 407-488 23-95 (301)
433 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00015 5.3E-09 68.0 0.9 19 204-222 152-170 (197)
434 3csv_A Aminoglycoside phosphot 97.0 0.0024 8.2E-08 65.7 9.9 33 526-558 183-219 (333)
435 1zyl_A Hypothetical protein YI 96.9 0.0059 2E-07 62.5 12.6 143 408-556 32-223 (328)
436 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00018 6.1E-09 67.6 0.2 87 85-171 37-136 (197)
437 2yle_A Protein spire homolog 1 96.7 0.0064 2.2E-07 57.4 9.7 99 486-603 33-131 (229)
438 3rfe_A Platelet glycoprotein I 96.7 0.0027 9.2E-08 55.5 6.6 35 115-149 33-67 (130)
439 3rfe_A Platelet glycoprotein I 96.6 0.0032 1.1E-07 55.1 6.1 56 69-126 12-68 (130)
440 1nw1_A Choline kinase (49.2 KD 96.5 0.0055 1.9E-07 65.4 8.9 73 407-488 78-159 (429)
441 3feg_A Choline/ethanolamine ki 96.3 0.0094 3.2E-07 62.3 9.2 141 408-556 56-254 (379)
442 2qg7_A Ethanolamine kinase PV0 96.2 0.028 9.5E-07 60.3 12.0 73 408-488 114-188 (458)
443 3c5i_A Choline kinase; choline 96.1 0.01 3.4E-07 61.9 7.7 73 408-488 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 95.8 0.026 9E-07 58.1 9.6 32 526-557 206-237 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.0 0.085 2.9E-06 55.3 10.1 142 409-556 59-280 (401)
446 2ks1_B Epidermal growth factor 93.8 0.11 3.6E-06 35.2 4.9 29 304-332 12-40 (44)
447 3mes_A Choline kinase; malaria 93.3 0.22 7.4E-06 52.7 8.9 73 408-488 76-157 (424)
448 2jwa_A Receptor tyrosine-prote 92.8 0.14 4.8E-06 34.5 4.2 21 313-333 21-41 (44)
449 2l2t_A Receptor tyrosine-prote 91.7 0.16 5.4E-06 34.3 3.3 29 304-332 11-39 (44)
450 3g15_A CK, chetk-alpha, cholin 88.2 1.1 3.8E-05 46.9 8.4 30 528-557 246-281 (401)
451 4ann_A ESSB; membrane protein, 86.3 4.6 0.00016 37.9 10.4 119 457-612 43-161 (215)
452 3cxl_A N-chimerin; SH2, RHO-GA 85.6 0.097 3.3E-06 56.2 -1.7 60 407-469 147-214 (463)
453 4ano_A ESSB; membrane protein, 82.6 3.5 0.00012 38.8 7.9 118 457-612 48-166 (219)
454 2k1k_A Ephrin type-A receptor 67.9 5 0.00017 26.1 3.2 27 303-329 10-37 (38)
455 2k9y_A Ephrin type-A receptor 63.8 3.8 0.00013 27.1 2.1 12 305-316 15-26 (41)
456 1iij_A ERBB-2 receptor protein 60.1 3.3 0.00011 26.3 1.1 25 305-330 10-34 (35)
457 2lz0_A Uncharacterized protein 35.9 83 0.0028 25.2 6.3 39 107-146 14-52 (100)
458 1cja_A Protein (actin-fragmin 33.2 3.3E+02 0.011 27.2 11.2 77 475-557 156-238 (342)
459 2lz0_A Uncharacterized protein 30.0 93 0.0032 24.8 5.7 49 74-123 5-53 (100)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.1e-57 Score=468.84 Aligned_cols=261 Identities=22% Similarity=0.359 Sum_probs=214.3
Q ss_pred CCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 403 CFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
+++..+.||+|+||+||+|++. +++.||||+++........++|.+|+++|++++|||||+++|+|... +..
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--~~~ 104 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD--QPL 104 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSC
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC--CEE
Confidence 3455678999999999999963 46799999998765455568899999999999999999999999654 678
Q ss_pred EEEEeecCCCChhhhhccccC------------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC
Q 005859 477 FLIYDFVPNGNLLQHLDLEAG------------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~ 544 (673)
+||||||++|+|.++|..... ....++|.++++|+.|||+||+|||++ +||||||||+||||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH--HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECGGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--CCCCCCccccceEECCCC
Confidence 999999999999999964321 124699999999999999999999997 799999999999999999
Q ss_pred CeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchh
Q 005859 545 NPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVE 622 (673)
Q Consensus 545 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~ 622 (673)
.+||+|||+|+....... .......||+.|||||++.++.|+.++|||||||+||||+| |+.||...........
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~--- 259 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM--- 259 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH---
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH---
Confidence 999999999987654322 22345678999999999999999999999999999999999 8999977544332221
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 623 DFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
+........+..++.++.+|+.+||+.||++||||+||++.|+++.+-
T Consensus 260 --i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~nl 307 (308)
T 4gt4_A 260 --IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNL 307 (308)
T ss_dssp --HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC-
T ss_pred --HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccCC
Confidence 111222234556678899999999999999999999999999987554
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.6e-57 Score=467.69 Aligned_cols=261 Identities=18% Similarity=0.360 Sum_probs=214.2
Q ss_pred cCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 402 QCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
++|...+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++|+|.+ .+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVE--GDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEee--CCE
Confidence 56788899999999999999864 37789999997643 3345789999999999999999999999965 467
Q ss_pred EEEEEeecCCCChhhhhcccc---------CCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCe
Q 005859 476 CFLIYDFVPNGNLLQHLDLEA---------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNP 546 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~ 546 (673)
.+||||||++|+|.++|+... .....++|.++++|+.|||+||+|||++ +||||||||+||||++++.+
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ--HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCccCHhhEEECCCCcE
Confidence 999999999999999997432 1235699999999999999999999987 79999999999999999999
Q ss_pred eeccccccccccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhh
Q 005859 547 LLSDSGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDF 624 (673)
Q Consensus 547 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~ 624 (673)
||+|||+|+........ ......||+.|||||++.++.|+.|+|||||||++|||+| |+.||............ ..
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i-~~- 245 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI-TQ- 245 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HH-
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-Hc-
Confidence 99999999876543322 2233468999999999999999999999999999999999 89999765443322211 11
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
......+..++.++.+|+.+||+.||++||||+||++.|+++..+
T Consensus 246 ---~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 246 ---GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 111233455678899999999999999999999999999988654
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-57 Score=462.39 Aligned_cols=261 Identities=18% Similarity=0.368 Sum_probs=207.4
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.+++...+.||+|+||+||+|++++ .||||+++..... ...++|.+|+++|++++|||||+++|++.. +..+||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---~~~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---DNLAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSCEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC---CeEEEE
Confidence 3567778899999999999998753 5999998754322 234679999999999999999999999843 457999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
||||++|+|.++|+.. ...++|.++++|+.|||+||+|||++ +||||||||+||||++++.+||+|||+|+....
T Consensus 110 mEy~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~--~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK--NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT--TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999999999743 34699999999999999999999987 799999999999999999999999999987654
Q ss_pred cc-hhhhhccCCCCCccCCccccC---CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh-cCCcCCCCCC
Q 005859 560 DI-VFSMLKASAAMGYLAPEYTTT---GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF-IDPNLEGKFS 634 (673)
Q Consensus 560 ~~-~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 634 (673)
.. .......+||+.|||||++.+ +.|+.|+|||||||+||||+||+.||............+... ..|.+ ...+
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~-~~~~ 263 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL-SKLY 263 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS-TTSC
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc-cccc
Confidence 32 223345689999999999864 459999999999999999999999997643322222222222 22222 2344
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
..++.++.+|+.+||+.||++||||.||++.|+.+-++
T Consensus 264 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 56678899999999999999999999999999877543
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9e-57 Score=468.45 Aligned_cols=261 Identities=21% Similarity=0.362 Sum_probs=208.8
Q ss_pred cCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 402 QCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
++|...+.||+|+||+||+|+++ +++.||||+++... ....++|.+|+++|++++|||||+++|+|.+ .+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTE--GRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCE
Confidence 46777889999999999999865 37899999997643 3445789999999999999999999999955 467
Q ss_pred EEEEEeecCCCChhhhhccccC-----------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAG-----------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~ 544 (673)
.+||||||++|+|.++++.... ....++|.++++|+.|||+||+|||++ +||||||||+||||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL--HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEEETTT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC--CeecccccHhhEEECCCC
Confidence 9999999999999999975321 124699999999999999999999987 799999999999999999
Q ss_pred CeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchh
Q 005859 545 NPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVE 622 (673)
Q Consensus 545 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~ 622 (673)
.+||+|||+|+....... .......||+.|||||++.+..|+.++|||||||+||||+| |+.||........... +.
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~-i~ 274 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC-IT 274 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH-HH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH-HH
Confidence 999999999997654332 22345679999999999999999999999999999999999 8999976544332221 11
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 623 DFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
... ....+..+++++.+|+.+||+.||++||||+||++.|+++.++
T Consensus 275 ~g~----~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 275 QGR----ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HTC----CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cCC----CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111 2234455678899999999999999999999999999998764
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.9e-56 Score=464.28 Aligned_cols=275 Identities=22% Similarity=0.358 Sum_probs=225.2
Q ss_pred ccCHHHHHHHhcCCccccccccCCcceEEEEEEcC------CcEEEEEEecccCCCCcHHHHHHHHHHHhccCC-CCcee
Q 005859 391 MFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH-ENLAS 463 (673)
Q Consensus 391 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~ 463 (673)
.+...+++...++|+..+.||+|+||+||+|++.. ++.||||++.......+.++|.+|+++|++++| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 34556777788899999999999999999998653 368999999876544456789999999999965 99999
Q ss_pred EeeEEecCCCCeEEEEEeecCCCChhhhhccccC------------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccC
Q 005859 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAG------------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHP 531 (673)
Q Consensus 464 l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHr 531 (673)
++|+|... .+..+||||||++|+|.++|+.... ....++|..++.|+.|||+||+|||++ +||||
T Consensus 133 l~g~~~~~-~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--~iiHR 209 (353)
T 4ase_A 133 LLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHR 209 (353)
T ss_dssp EEEEECCT-TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT--TCCCS
T ss_pred EEEEEEec-CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC--CeecC
Confidence 99998643 3568999999999999999974321 134589999999999999999999998 79999
Q ss_pred CcCCCCeEecCCCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 005859 532 NLSAEKVLIHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSIT 609 (673)
Q Consensus 532 Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~ 609 (673)
||||+|||+++++.+||+|||+|+.+..+.. .......||+.|||||++.++.|+.++|||||||+||||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999997654332 22334578999999999999999999999999999999998 899997
Q ss_pred hhhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 610 PFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
...........+.+.. ....+..+++++.+++.+||+.||++||||.||++.|++++++
T Consensus 290 ~~~~~~~~~~~i~~g~----~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 290 GVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp TCCCSHHHHHHHHHTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCC----CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 6432221112222222 2233445667899999999999999999999999999999875
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-54 Score=439.66 Aligned_cols=249 Identities=22% Similarity=0.360 Sum_probs=200.9
Q ss_pred ccccccccCCcceEEEEEEcC-CcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecC--CCCeEEEEE
Q 005859 405 SEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSK--GRGECFLIY 480 (673)
Q Consensus 405 ~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~~~lv~ 480 (673)
...+.||+|+||+||+|+... ++.||||++..... ....+.|.+|+++|++++|||||+++++|... ..+..||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 455679999999999999764 88999999976542 23346799999999999999999999998642 235689999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC-CCCeeeccccccccccC
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR-RYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~-~~~~kl~DfGla~~~~~ 559 (673)
|||++|+|.+++.. ...+++..+..|+.||+.||+|||++.++||||||||+||||+. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999973 34699999999999999999999998556999999999999984 78999999999986544
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||............+..... ...++...++
T Consensus 185 ~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~---~~~~~~~~~~ 257 (290)
T 3fpq_A 185 S---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK---PASFDKVAIP 257 (290)
T ss_dssp T---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC---CGGGGGCCCH
T ss_pred C---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC---CCCCCccCCH
Confidence 3 2335689999999998864 6999999999999999999999999654322221111111111 1122333456
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHH
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
++.+|+.+||+.||++|||++|+++
T Consensus 258 ~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 258 EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 7999999999999999999999985
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-54 Score=449.88 Aligned_cols=251 Identities=16% Similarity=0.334 Sum_probs=204.2
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.... ...+.|.+|+++|++++|||||++++++.+. +..|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~--~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN--GSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC--CEEEEE
Confidence 57999999999999999999976 5999999999765432 2346799999999999999999999999654 789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
||||+||+|.+++... ....+++..++.|+.||+.||+|||++ |||||||||+||||++++.+||+|||+|+.+..
T Consensus 102 mEy~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR--KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT--TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC--CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999999643 234578999999999999999999998 899999999999999999999999999997754
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||............... .. ...+...+.
T Consensus 178 ~~~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~----~~-~~~~~~~s~ 251 (350)
T 4b9d_A 178 TVE-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG----SF-PPVSLHYSY 251 (350)
T ss_dssp HHH-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT----CC-CCCCTTSCH
T ss_pred Ccc-cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC----CC-CCCCccCCH
Confidence 322 233457999999999999999999999999999999999999999765433322222221 11 122334567
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHH
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
++.+|+.+||+.||++|||++|+++
T Consensus 252 ~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 252 DLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999999985
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7e-54 Score=446.07 Aligned_cols=249 Identities=17% Similarity=0.293 Sum_probs=209.6
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
..|+..+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+. +..||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--CEEEEEE
Confidence 56889999999999999999976 59999999997654 34456789999999999999999999999664 7899999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
|||++|+|.+++.. ..+++..+..|+.||+.||+|||++ |||||||||+||||+.++.+||+|||+|+.+..+
T Consensus 151 Ey~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC--CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 99999999999863 3589999999999999999999998 8999999999999999999999999999977554
Q ss_pred chhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN 640 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||........... +.....+.+ ......+.+
T Consensus 224 ~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~~~~--~~~~~~s~~ 299 (346)
T 4fih_A 224 VP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPPRL--KNLHKVSPS 299 (346)
T ss_dssp SC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSSCCCC--SCGGGSCHH
T ss_pred CC-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCCCCC--CccccCCHH
Confidence 32 23456899999999999999999999999999999999999999976433322211 111111111 223445678
Q ss_pred HHHHHHHccccCCCCCCCHHHHHH
Q 005859 641 LGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 641 l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.+|+.+||+.||++|||++|+++
T Consensus 300 ~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 300 LKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 999999999999999999999975
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.7e-54 Score=444.62 Aligned_cols=261 Identities=19% Similarity=0.272 Sum_probs=200.4
Q ss_pred CCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC--CeEEEEE
Q 005859 403 CFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR--GECFLIY 480 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~~~lv~ 480 (673)
+|...+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|...+. ...+|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 567788999999999999998 58999999986532 112233456666778999999999999976532 3689999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC------CCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK------RPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
|||++|+|.++++. ..++|..+.+++.|+|+||+|||++ .++||||||||+||||++++.+||+|||+|
T Consensus 81 Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999963 3589999999999999999999975 458999999999999999999999999999
Q ss_pred ccccCcchh---hhhccCCCCCccCCccccCC------CCCcchhHHHHHHHHHHHHhCCCCCChhhH-------h----
Q 005859 555 KLLADDIVF---SMLKASAAMGYLAPEYTTTG------RFTEKSDIYAFGMIVFQILSGKCSITPFTR-------Q---- 614 (673)
Q Consensus 555 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSfGvvl~el~tG~~p~~~~~~-------~---- 614 (673)
+........ .....+||+.|||||++.+. .|+.|+|||||||++|||+||+.|+..... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 876543221 22345799999999999754 378899999999999999999876532110 0
Q ss_pred ----hhhccchhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 615 ----AAESSKVEDFIDPNLEGKF-SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 615 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
........+..+|.++... +.+.+..+.+|+.+||+.||++||||.||++.|+++.+
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 0000011122233332211 23456789999999999999999999999999999865
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.1e-54 Score=445.24 Aligned_cols=253 Identities=18% Similarity=0.198 Sum_probs=206.3
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
+.|...++||+|+||+||+|+.+. |+.||||+++.... +.+|+++|++++|||||++++++.+. +..||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~--~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREG--PWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEEC--CEEEEEE
Confidence 467888899999999999999764 99999999976431 24799999999999999999999654 7899999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC-CeeeccccccccccC
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY-NPLLSDSGLHKLLAD 559 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~-~~kl~DfGla~~~~~ 559 (673)
|||+||+|.++++. ...+++..+..|+.||+.||+|||++ |||||||||+||||+.++ .+||+|||+|+.+..
T Consensus 130 Ey~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR--RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT--TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 99999999999973 34699999999999999999999987 799999999999999988 699999999998764
Q ss_pred cchh----hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 560 DIVF----SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 560 ~~~~----~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
+... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||............... +......+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~ 280 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE---PPPIREIPP 280 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS---CCGGGGSCT
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC---CCCchhcCc
Confidence 3221 122357999999999999999999999999999999999999999754322111111111 111113344
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+..+.+++.+||+.||++|||+.|+++.|.+.+.
T Consensus 281 ~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 281 SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 566889999999999999999999999999887654
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.5e-53 Score=437.05 Aligned_cols=248 Identities=18% Similarity=0.247 Sum_probs=208.6
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|+..+.||+|+||+||+|+.. +|+.||||++.+... ....+.+.+|+++|++++|||||++++++.+ .+..||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~yi 109 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD--DEKLYF 109 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEEE
Confidence 46999999999999999999976 499999999976431 3345689999999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
|||||+||+|.+++.. ...+++..+..|+.||+.||+|||++ |||||||||+|||+++++.+||+|||+|+.+.
T Consensus 110 vmEy~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~--~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 9999999999999973 34699999999999999999999998 89999999999999999999999999999875
Q ss_pred Ccch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.+.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||............... . ..++...
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~----~--~~~p~~~ 257 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL----E--YDFPEKF 257 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----C--CCCCTTC
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC----C--CCCCccc
Confidence 4322 2234568999999999999999999999999999999999999999765433222222111 1 1233445
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVM 663 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl 663 (673)
++++.+|+.+||+.||++|||++|++
T Consensus 258 s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 67899999999999999999999864
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-52 Score=447.14 Aligned_cols=250 Identities=17% Similarity=0.292 Sum_probs=210.0
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.+.|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+. +..|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC--CEEEEE
Confidence 457999999999999999999976 49999999997654 34456799999999999999999999999664 789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
||||+||+|.+++.. ..+++..+..|+.||+.||+|||++ |||||||||+||||+.++.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~--~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC--CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999999863 3489999999999999999999998 899999999999999999999999999987755
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||........... +.....+.+ ......+.
T Consensus 300 ~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~~~~--~~~~~~s~ 375 (423)
T 4fie_A 300 EVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPPRL--KNLHKVSP 375 (423)
T ss_dssp SCC-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSCCCCC--SCTTSSCH
T ss_pred CCc-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCCCCC--cccccCCH
Confidence 432 23456799999999999999999999999999999999999999976543322221 111111221 22234567
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHH
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
++.+|+.+||+.||++|||+.|+++
T Consensus 376 ~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 376 SLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 8999999999999999999999975
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-52 Score=423.68 Aligned_cols=246 Identities=18% Similarity=0.290 Sum_probs=191.8
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|+..+.||+|+||+||+|+.. +|+.||||++.+... ....+.+.+|+++|++++|||||++++++.+ .+..|+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~--~~~~~i 90 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS--KDEIIM 90 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--CCEEEE
Confidence 57999999999999999999975 599999999976542 2234679999999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||| +|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+|+...
T Consensus 91 vmEy~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEeCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 99999 6899999873 34699999999999999999999998 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
+.. .....+||+.|||||++.+..| +.++||||+||++|||+||+.||............. ... ..++...
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~----~~~--~~~p~~~ 235 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS----NGV--YTLPKFL 235 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HTC--CCCCTTS
T ss_pred CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH----cCC--CCCCCCC
Confidence 432 2334679999999999998876 589999999999999999999997643322211111 111 1223345
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
++++.+++.+||+.||++|||++|+++
T Consensus 236 s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 236 SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 678899999999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1e-52 Score=430.88 Aligned_cols=248 Identities=20% Similarity=0.299 Sum_probs=198.1
Q ss_pred cCCccccccccCCcceEEEEEEc----CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
++|++.+.||+|+||+||+|+.. .++.||||++.+... ..+...+.+|+++|++++|||||++++++.+. +..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE--GKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET--TEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CEE
Confidence 46999999999999999999863 378999999976532 22345788999999999999999999999654 789
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
|+|||||+||+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 999999999999999973 34699999999999999999999998 899999999999999999999999999986
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
...... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.............. .. ..++..
T Consensus 176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~----~~--~~~p~~ 248 (304)
T 3ubd_A 176 SIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK----AK--LGMPQF 248 (304)
T ss_dssp -----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----CC--CCCCTT
T ss_pred ccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc----CC--CCCCCc
Confidence 544321 23346799999999999999999999999999999999999999976543332222211 11 123344
Q ss_pred HHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 005859 637 EASNLGQIALHCTHESPSHRPSI-----ENVMQ 664 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~-----~evl~ 664 (673)
.++++.+|+.+||+.||++|||+ +|+++
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 56789999999999999999984 56653
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.8e-51 Score=423.28 Aligned_cols=253 Identities=18% Similarity=0.288 Sum_probs=192.9
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC-------
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR------- 473 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------- 473 (673)
++|+..+.||+|+||+||+|+.+ +|+.||||++.........+.+.+|+++|++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46899999999999999999976 5899999999765433445679999999999999999999999865432
Q ss_pred ---CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecc
Q 005859 474 ---GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSD 550 (673)
Q Consensus 474 ---~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~D 550 (673)
...|+|||||++|+|.+++.... .....++..++.|+.||+.||+|||++ |||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~--~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC--cCccccCcHHHeEECCCCcEEEcc
Confidence 24789999999999999997432 234567788899999999999999998 899999999999999999999999
Q ss_pred ccccccccCcchh-----------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhcc
Q 005859 551 SGLHKLLADDIVF-----------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619 (673)
Q Consensus 551 fGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~ 619 (673)
||+|+.+..+... ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||........
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~--- 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR--- 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH---
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH---
Confidence 9999977543211 1234579999999999999999999999999999999996 7754332211
Q ss_pred chhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+..+.....+ .......+.+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TLTDVRNLKFP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHTTCCC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHhcCCCC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111111 112233456788999999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-48 Score=415.48 Aligned_cols=256 Identities=18% Similarity=0.262 Sum_probs=200.9
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecC----CCCe
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSK----GRGE 475 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~~~~ 475 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.... ...+.+.+|+++|++++|||||++++++... +.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999976 5999999999765422 2346788999999999999999999987543 2367
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.|||||||+ |+|.+++.. ...+++..+..|+.||+.||+|||++ |||||||||+|||++.++.+||+|||+|+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~--~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--cCcCCCcCccccccCCCCCEEEeecceee
Confidence 899999995 789999963 35699999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcch---hhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCc---
Q 005859 556 LLADDIV---FSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN--- 628 (673)
Q Consensus 556 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~--- 628 (673)
.+..... ......+||+.|||||++.+. .|+.++||||+||++|||+||+.||.+................+.
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence 7644221 123456899999999998875 469999999999999999999999975432221111111000000
Q ss_pred ---------------CCC--CCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 629 ---------------LEG--KFS-----VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 629 ---------------~~~--~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
... ..+ ...+.++.+|+.+||+.||++|||+.|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 001 123467899999999999999999999975
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1e-47 Score=405.99 Aligned_cols=256 Identities=20% Similarity=0.287 Sum_probs=198.8
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEc----CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEe
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICC 469 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 469 (673)
+.+....++|++.+.||+|+||+||+|+.+ .++.||||++.+. ....++.+|+++|+++ +|||||++++++.
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 344455688999999999999999999853 3678999998654 3456788999999998 6999999999996
Q ss_pred cCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC-CCeee
Q 005859 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR-YNPLL 548 (673)
Q Consensus 470 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~-~~~kl 548 (673)
+ .+..|+|||||++|+|.+++. .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||
T Consensus 91 ~--~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~--gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 91 K--NDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF--GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp E--TTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEETTTTEEEE
T ss_pred E--CCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC--CeEeCcCCHHHeEEeCCCCeEEE
Confidence 5 478999999999999999984 388999999999999999999998 89999999999999877 79999
Q ss_pred ccccccccccCcch---------------------------hhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHH
Q 005859 549 SDSGLHKLLADDIV---------------------------FSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQ 600 (673)
Q Consensus 549 ~DfGla~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~e 600 (673)
+|||+|+...+... ......+||+.|||||++.+. .|+.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 99999986543211 012335799999999999875 48999999999999999
Q ss_pred HHhCCCCCChhhHhhhhccch-----------------------------------hhh--cC---CcCC---------C
Q 005859 601 ILSGKCSITPFTRQAAESSKV-----------------------------------EDF--ID---PNLE---------G 631 (673)
Q Consensus 601 l~tG~~p~~~~~~~~~~~~~~-----------------------------------~~~--~~---~~~~---------~ 631 (673)
|+||+.||.+..+.......+ ... .+ +... .
T Consensus 240 ll~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 319 (361)
T 4f9c_A 240 LLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNL 319 (361)
T ss_dssp HHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC--------------------
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccc
Confidence 999999995432110000000 000 00 0000 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 632 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
......++++.+|+.+||+.||++|||++|+++
T Consensus 320 ~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 320 EGWNEVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp --CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 111223567899999999999999999999985
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.3e-47 Score=398.11 Aligned_cols=278 Identities=30% Similarity=0.597 Sum_probs=233.4
Q ss_pred cccCHHHHHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEe
Q 005859 390 FMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469 (673)
Q Consensus 390 ~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 469 (673)
..++++++...+++|...+.||+|+||.||+|+..+|+.||||++...........+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 46788999999999999999999999999999988899999999987654444457999999999999999999999995
Q ss_pred cCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC-CCCcccCCcCCCCeEecCCCCeee
Q 005859 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLL 548 (673)
Q Consensus 470 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~ivHrDlk~~NILl~~~~~~kl 548 (673)
. .+..++||||+++|+|.+++.........++|..+..++.|++.||+|||+. .+||+||||||+|||+++++.+||
T Consensus 98 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 98 T--PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp C--SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred c--CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 4 4678999999999999999986554556699999999999999999999985 447999999999999999999999
Q ss_pred ccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhh-------------
Q 005859 549 SDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA------------- 615 (673)
Q Consensus 549 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~------------- 615 (673)
+|||+++..............||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 9999998775443333444568999999999988889999999999999999999999986432111
Q ss_pred hhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005859 616 AESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i 669 (673)
..........+.......+...+..+.+++.+||+.||++|||+.||++.|++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 111233344455555667788899999999999999999999999999999853
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.8e-46 Score=392.69 Aligned_cols=276 Identities=31% Similarity=0.574 Sum_probs=229.0
Q ss_pred ccCHHHHHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEec
Q 005859 391 MFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS 470 (673)
Q Consensus 391 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (673)
.+++.++...+++|...+.||+|+||.||+|+.++++.||||++.... ....+.+.+|++++++++||||+++++++..
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 345566677889999999999999999999998889999999887653 3445789999999999999999999999854
Q ss_pred CCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecc
Q 005859 471 KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSD 550 (673)
Q Consensus 471 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~D 550 (673)
.+..++||||+++|+|.+++.........++|..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 107 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 107 --RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp --TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCSTTEEECTTCCEEECC
T ss_pred --CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC--CeecCCCCHHHEEECCCCCEEEee
Confidence 4678999999999999999975443345699999999999999999999997 899999999999999999999999
Q ss_pred ccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhh-----------hhc
Q 005859 551 SGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA-----------AES 618 (673)
Q Consensus 551 fGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~-----------~~~ 618 (673)
||+++....... .......||..|+|||++.+..++.++|||||||++|||+||+.||....... ...
T Consensus 183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 999986543211 11223457899999999998899999999999999999999999986432110 111
Q ss_pred cchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 619 SKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+...+++..........+..+.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 22334455555566778889999999999999999999999999999998865
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9e-47 Score=422.55 Aligned_cols=251 Identities=18% Similarity=0.301 Sum_probs=208.2
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.+ +|+.||||++.... ..+.+.+.+|+++|++++|||||++++++.+ .+..||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~~iv~ 233 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFED--DNEMVMIY 233 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC--SSEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE--CCEEEEEE
Confidence 57999999999999999999976 49999999997653 3345678999999999999999999999954 48899999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC--CCeeecccccccccc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR--YNPLLSDSGLHKLLA 558 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~--~~~kl~DfGla~~~~ 558 (673)
|||+||+|.+++... ...+++..+..|+.||+.||+|||++ ||+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 234 E~~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~--~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 234 EFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN--NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp ECCCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred eecCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC--CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 999999999998632 24689999999999999999999998 79999999999999854 799999999999876
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||............... +...........+
T Consensus 309 ~~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s 384 (573)
T 3uto_A 309 PKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC--DWNMDDSAFSGIS 384 (573)
T ss_dssp TTSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT--CCCCCSGGGTTSC
T ss_pred CCCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhC--CCCCCcccccCCC
Confidence 5432 33457999999999999999999999999999999999999999765433222211111 1111112223345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.++.+|+.+||+.||++|||+.|+++
T Consensus 385 ~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 385 EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 78899999999999999999999986
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.1e-47 Score=420.00 Aligned_cols=249 Identities=19% Similarity=0.267 Sum_probs=200.9
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHH---HHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLK---GLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~---E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
++|++.+.||+|+||+||+|+.+. |+.||||++.+... ......+.+ ++++++.++|||||++++++.+ .+.
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~--~~~ 266 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDK 266 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC--SSE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE--CCE
Confidence 689999999999999999999764 99999999976421 122333333 4677788899999999999954 588
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.|+|||||+||+|.++|.. ...+++..+..|+.||+.||+|||++ |||||||||+||||+.+|.+||+|||+|+
T Consensus 267 lylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~--gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR--FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCchHHeEEeCCCCEEecccceee
Confidence 9999999999999999973 34699999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.+.... ....+||+.|||||++.. ..|+.++||||+||++|||+||+.||........ ......+... ...++
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~i~~~--~~~~p 414 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTM--AVELP 414 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHHHHHC--CCCCC
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCC--CCCCC
Confidence 876543 234689999999999975 5799999999999999999999999975422111 0111111111 11234
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPS-----IENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~ 664 (673)
...+.++.+|+.+||+.||++|++ ++||++
T Consensus 415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 455678999999999999999998 677753
No 22
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.7e-45 Score=390.09 Aligned_cols=262 Identities=20% Similarity=0.391 Sum_probs=213.5
Q ss_pred hcCCccccccccCCcceEEEEEEc--------CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR--------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSK 471 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 471 (673)
.++|...+.||+|+||.||+|+.. ++..||||++.........+++.+|+++++++ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence 467889999999999999999863 35679999997654333456799999999999 89999999999954
Q ss_pred CCCeEEEEEeecCCCChhhhhccccC------------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeE
Q 005859 472 GRGECFLIYDFVPNGNLLQHLDLEAG------------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL 539 (673)
Q Consensus 472 ~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NIL 539 (673)
.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ ||+||||||+|||
T Consensus 159 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 -DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--KCIHRDLAARNVL 235 (370)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEE
T ss_pred -CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--CeeccccchhhEE
Confidence 4678999999999999999975421 124589999999999999999999998 8999999999999
Q ss_pred ecCCCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhh
Q 005859 540 IHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAE 617 (673)
Q Consensus 540 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~ 617 (673)
++.++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||+| |+.||.........
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~ 315 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999987654322 12334457788999999999999999999999999999999 99998654322111
Q ss_pred ccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 618 SSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
. .+........+..++.++.+++.+||+.||++|||+.|+++.|++++.
T Consensus 316 ~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 316 K-----LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp H-----HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-----HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1 111111223344556789999999999999999999999999999875
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.5e-45 Score=378.07 Aligned_cols=269 Identities=24% Similarity=0.404 Sum_probs=207.3
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCC
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGR 473 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (673)
+++....++|++.+.||+|+||+||+|+. +|+.||||++...... ...+++.+|++++++++||||+++++++.. .
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~ 106 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ--P 106 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--T
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--C
Confidence 33444567899999999999999999987 5889999999765422 223578999999999999999999999954 4
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+..++|+||||||+|||++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 185 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHST-THHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred CceEEEEecCCCCcHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence 6789999999999999999742 122358999999999999999999999832399999999999999999999999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||............... ......
T Consensus 186 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~----~~~~~~ 260 (309)
T 3p86_A 186 SRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK----CKRLEI 260 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS----CCCCCC
T ss_pred Ccccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc----CCCCCC
Confidence 986544321 233456899999999999999999999999999999999999999765433221111111 111233
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
+...+.++.+++.+||+.||++|||+.++++.|++++.+
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 444567899999999999999999999999999998764
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.7e-45 Score=369.79 Aligned_cols=257 Identities=22% Similarity=0.406 Sum_probs=215.6
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEEe
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~E 481 (673)
++|...+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++.+ .+..++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 85 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE--QAPICLVFE 85 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSSEEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCceEEEEE
Confidence 5688899999999999999999889999999997653 345789999999999999999999999954 467899999
Q ss_pred ecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCcc
Q 005859 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~ 561 (673)
|+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp CCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred eCCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC--CeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 99999999999632 34589999999999999999999987 89999999999999999999999999998776554
Q ss_pred hhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHH
Q 005859 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN 640 (673)
Q Consensus 562 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||.+.+..++.++||||+|+++|||+| |+.||............ .. ......+...+..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~ 235 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-ST----GFRLYKPRLASTH 235 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HT----TCCCCCCTTSCHH
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-hc----CccCCCCCcCCHH
Confidence 434444567778999999998899999999999999999999 99998764333221111 11 1111223334578
Q ss_pred HHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 641 LGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 641 l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
+.+++.+||+.||++|||++|+++.|+++.++
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 236 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999875
No 25
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.3e-45 Score=383.36 Aligned_cols=250 Identities=17% Similarity=0.319 Sum_probs=198.6
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||+||+|+.. +|+.||||++.......+...+.+|++++++++||||+++++++.. .+..++|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET--ANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe--CCEEEEE
Confidence 467999999999999999999975 5999999999876544455678999999999999999999999954 4789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||+++++.+||+|||+++....
T Consensus 87 ~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 87 LEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ--GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 999999999999963 24589999999999999999999998 899999999999999999999999999987654
Q ss_pred cchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........||+.|+|||++.+..+ +.++||||+||++|||++|+.||............... .. ..+...+
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~----~~--~~p~~~s 234 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG----KY--DVPKWLS 234 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----CC--CCCTTCC
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC----CC--CCCCCCC
Confidence 43333445678999999999988775 89999999999999999999999764333222211111 11 1223345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 235 PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 67889999999999999999999985
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.2e-45 Score=381.06 Aligned_cols=260 Identities=23% Similarity=0.414 Sum_probs=211.2
Q ss_pred hcCCccccccccCCcceEEEEEEc----CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|...+.||+|+||.||+|+.. .+..||||++.........+.|.+|++++++++||||+++++++.. .+..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--GRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG--GGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCcc
Confidence 357888999999999999999975 3456999999865434445789999999999999999999999954 4678
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL--GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC--CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 9999999999999999632 24689999999999999999999998 899999999999999999999999999987
Q ss_pred ccCcchh--hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 557 LADDIVF--SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 557 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||............ .. ......
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~----~~~~~~ 275 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-EE----GYRLPA 275 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-HT----TCCCCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-Hc----CCCCCC
Confidence 6543211 1223345778999999998899999999999999999999 99998765433222111 11 111223
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
+...+..+.+++.+||+.||++|||+.||++.|++++.+
T Consensus 276 ~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 276 PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 344567899999999999999999999999999999764
No 27
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.5e-45 Score=388.50 Aligned_cols=259 Identities=23% Similarity=0.425 Sum_probs=200.7
Q ss_pred hcCCccccccccCCcceEEEEEEc----CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|...+.||+|+||.||+|+.. ++..||||++.........++|.+|++++++++||||+++++++.. .+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCce
Confidence 357899999999999999999975 4778999999765433445689999999999999999999999954 4678
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.++++.. ...+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC--CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999999732 34689999999999999999999987 899999999999999999999999999987
Q ss_pred ccCcchh--hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 557 LADDIVF--SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 557 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||........... +........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~-----i~~~~~~~~ 271 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-----VDEGYRLPP 271 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHH-----HHTTEECCC
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCC
Confidence 6543221 1122345678999999998999999999999999999998 9999876543322111 111111122
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+...+..+.+++.+||+.||++||++.+|++.|++++.
T Consensus 272 ~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 33456789999999999999999999999999999865
No 28
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8.9e-45 Score=397.94 Aligned_cols=261 Identities=21% Similarity=0.389 Sum_probs=216.9
Q ss_pred HHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 398 ERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 398 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
+...++|...+.||+|+||+||+|.++++..||||+++... ...++|.+|+++|++++|||||++++++. .+..+
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~---~~~~~ 258 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT---KEPIY 258 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC---SSSCE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe---CCccE
Confidence 33456788899999999999999999888999999997653 45678999999999999999999999984 25679
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 259 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR--NYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 9999999999999997431 23588999999999999999999998 7999999999999999999999999999887
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
............++..|+|||++....++.++|||||||++|||+| |+.||........... +... .....+..
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~----~~~~~~~~ 409 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LERG----YRMPRPEN 409 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHHT----CCCCCCTT
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcC----CCCCCCCC
Confidence 6543333334456778999999998899999999999999999999 9999976543322211 1111 11122344
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 637 EASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
++.++.+++.+||+.||++|||+++|++.|++++.+
T Consensus 410 ~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 567899999999999999999999999999998753
No 29
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=376.50 Aligned_cols=258 Identities=22% Similarity=0.434 Sum_probs=209.0
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+.. +++.||+|++.... ....+.|.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv~ 86 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD--KRLNFIT 86 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecC--CeeEEEE
Confidence 56888899999999999999976 48999999886532 34457899999999999999999999999654 7799999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 87 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 87 EYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM--NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp ECCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred EecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 999999999999742 34589999999999999999999998 8999999999999999999999999999876543
Q ss_pred chhh-------------hhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh-ccchhhhcC
Q 005859 561 IVFS-------------MLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE-SSKVEDFID 626 (673)
Q Consensus 561 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~-~~~~~~~~~ 626 (673)
.... .....||+.|+|||++.+..++.++||||||+++|||++|..|+......... ........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 2211 11356899999999999999999999999999999999999887654222111 111111111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.. .+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 242 ~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 242 RY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11 122334678999999999999999999999999998753
No 30
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.4e-44 Score=368.17 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=212.6
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
.++|...+.||+|+||.||+|...++..||||++.... ...+++.+|++++++++||||+++++++.. .+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEec--CCCeEEEE
Confidence 45788899999999999999999988899999997653 345789999999999999999999999954 47789999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK--QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 999999999999742 34589999999999999999999987 8999999999999999999999999999877654
Q ss_pred chhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........+++.|+|||.+.+..++.++||||||+++|||+| |+.||........... +... .....+...+.
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~~----~~~~~~~~~~~ 248 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQG----LRLYRPHLASE 248 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHTT----CCCCCCTTCCH
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-Hhcc----cCCCCCCcCCH
Confidence 4333444556788999999998899999999999999999999 9999876543322221 1111 11122333457
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.+.+++.+||+.||++|||++|+++.|++++.
T Consensus 249 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 249 KVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 89999999999999999999999999999875
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.2e-45 Score=391.82 Aligned_cols=259 Identities=25% Similarity=0.439 Sum_probs=211.4
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||.||+|++. +++.||||++.........++|.+|+++|++++||||+++++++.. .+..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS--SSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec--CCCcEEE
Confidence 457888899999999999999987 5899999998765322334578899999999999999999999954 3678999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+|||+++++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK--CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 9999999999999742 24589999999999999999999998 899999999999999999999999999986554
Q ss_pred cchhhh-hccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 560 DIVFSM-LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 560 ~~~~~~-~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
...... ....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......... .+........+..+
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~ 340 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE-----FVEKGGRLPCPELC 340 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH-----HHHTTCCCCCCTTC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCC
Confidence 322111 11234667999999998899999999999999999999 999987654332211 11111122233445
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+.++.+++.+||+.||++|||+.++++.|+++..
T Consensus 341 ~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 341 PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 6789999999999999999999999999998864
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.5e-45 Score=375.50 Aligned_cols=266 Identities=23% Similarity=0.392 Sum_probs=209.5
Q ss_pred hcCCccccccccCCcceEEEEEEc-----CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
.++|+..+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 357888999999999999999852 48899999987543 333467999999999999999999999987654456
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred eEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC--CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 89999999999999999743 23589999999999999999999987 89999999999999999999999999998
Q ss_pred cccCcchh--hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh-----------ccchh
Q 005859 556 LLADDIVF--SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE-----------SSKVE 622 (673)
Q Consensus 556 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~-----------~~~~~ 622 (673)
........ ......++..|+|||.+.+..++.++||||||+++|||+||..|+......... .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76543221 122344677899999999899999999999999999999999887643221100 00111
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 623 DFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
+..........+...+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11112222233445668899999999999999999999999999998753
No 33
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=9.7e-45 Score=379.63 Aligned_cols=263 Identities=19% Similarity=0.273 Sum_probs=207.5
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCC--CCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG--RGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~~~l 478 (673)
.++|...+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++.... ....++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 467899999999999999999876 7999999996542 33456677999999999999999999997643 235799
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC--------CCCcccCCcCCCCeEecCCCCeeecc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK--------RPGLVHPNLSAEKVLIHRRYNPLLSD 550 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------~~~ivHrDlk~~NILl~~~~~~kl~D 550 (673)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. .+||+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999963 3489999999999999999999986 34799999999999999999999999
Q ss_pred ccccccccCcchh-hhhccCCCCCccCCccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh--------
Q 005859 551 SGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTG-----RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA-------- 616 (673)
Q Consensus 551 fGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~-------- 616 (673)
||+++........ ......||+.|+|||++.+. .++.++|||||||++|||+||+.||........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543221 22335689999999999863 467789999999999999999999864211100
Q ss_pred ----hccc----hhhhcCCcCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 617 ----ESSK----VEDFIDPNLEGK-FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 617 ----~~~~----~~~~~~~~~~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.... ......+.+... .....+.++.+++.+||+.||++|||+.||++.|+++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0000 011111111111 123456779999999999999999999999999998864
No 34
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.4e-44 Score=370.22 Aligned_cols=250 Identities=14% Similarity=0.252 Sum_probs=207.7
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++... +..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVG--DELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC--CEEEEE
Confidence 467999999999999999999964 58999999997654 34567899999999999999999999999654 679999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 96 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN--QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC--CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 999999999999963 3589999999999999999999998 899999999999999999999999999987654
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||............... ..+ ....+...+.
T Consensus 169 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~ 244 (297)
T 3fxz_A 169 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTP--ELQNPEKLSA 244 (297)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH-CSC--CCSCGGGSCH
T ss_pred ccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCC--CCCCccccCH
Confidence 332 233457899999999999999999999999999999999999999654332221111111 111 1122345567
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHH
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 245 IFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhh
Confidence 8999999999999999999999985
No 35
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.3e-45 Score=386.00 Aligned_cols=275 Identities=22% Similarity=0.362 Sum_probs=220.2
Q ss_pred ccCHHHHHHHhcCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCcee
Q 005859 391 MFNLEEVERATQCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLAS 463 (673)
Q Consensus 391 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~ 463 (673)
.+...+++...++|...+.||+|+||.||+|++. +++.||||++.........+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 4556777788899999999999999999999842 36799999997654334456799999999999 8999999
Q ss_pred EeeEEecCCCCeEEEEEeecCCCChhhhhccccCC---------------------------------------------
Q 005859 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGS--------------------------------------------- 498 (673)
Q Consensus 464 l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~--------------------------------------------- 498 (673)
+++++... ....++||||+++|+|.+++......
T Consensus 91 ~~~~~~~~-~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 91 LLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp EEEEECST-TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeecC-CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 99998653 34589999999999999999754221
Q ss_pred -----------------ccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCcc
Q 005859 499 -----------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI 561 (673)
Q Consensus 499 -----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~ 561 (673)
...+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~--~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC--CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12289999999999999999999998 89999999999999999999999999998664332
Q ss_pred h-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 562 V-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 562 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. .......+|..|+|||++.+..++.++|||||||++|||+| |+.||............+... .....+...+.
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 323 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG----TRMRAPDYTTP 323 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT----CCCCCCTTCCH
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC----CCCCCCCCCCH
Confidence 1 12334567889999999999899999999999999999999 999986543221111111111 11222334457
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
++.+++.+||+.||++|||+.|+++.|++++++
T Consensus 324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998763
No 36
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.4e-44 Score=371.62 Aligned_cols=264 Identities=19% Similarity=0.316 Sum_probs=215.1
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+... ++.||||++.........+.+.+|++++++++||||+++++++........++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 578899999999999999999875 8999999998655445567889999999999999999999999776666889999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe----cCCCCeeecccccccc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI----HRRYNPLLSDSGLHKL 556 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl----~~~~~~kl~DfGla~~ 556 (673)
||+++|+|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC--CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997432 123489999999999999999999998 89999999999999 7888899999999987
Q ss_pred ccCcchhhhhccCCCCCccCCcccc--------CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhc---
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTT--------TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI--- 625 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~--- 625 (673)
...... .....||..|+|||++. +..++.++|||||||++|||+||+.||.+..........+..+.
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 655432 23456899999999886 56789999999999999999999999864322111111111111
Q ss_pred --------------------CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005859 626 --------------------DPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670 (673)
Q Consensus 626 --------------------~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~ 670 (673)
........+...+..+.+++.+||+.||++|||++|+++...+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 001112445677889999999999999999999999999887653
No 37
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.5e-44 Score=371.49 Aligned_cols=261 Identities=20% Similarity=0.323 Sum_probs=207.2
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC--cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS--DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||.||+|+.. +++.||+|.+....... ..+.+.+|++++++++||||+++++++.. .+..++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--~~~~~l 88 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE--DDCYYL 88 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC--SSEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee--CCeEEE
Confidence 57889999999999999999976 48999999986543222 23578999999999999999999999854 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++...
T Consensus 89 v~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 9999999999999973 24689999999999999999999988 89999999999999999999999999998776
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
...........||+.|+|||.+.+..++.++||||||+++|||+||+.||................. +..........+
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 241 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV-PNVTTDVRKDIP 241 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC-CCHHHHSCTTSC
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC-CCcchhcccCCC
Confidence 5433334445689999999999999999999999999999999999999976543222111111111 111111223345
Q ss_pred HHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhc
Q 005859 639 SNLGQIALHCTHESPSHRP-SIENVMQELSSIIG 671 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RP-s~~evl~~L~~i~~ 671 (673)
..+.+++.+||+.||++|| +++++.+.|++++.
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 7899999999999999998 99999999998765
No 38
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=7.3e-44 Score=370.34 Aligned_cols=262 Identities=18% Similarity=0.341 Sum_probs=205.1
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||+||+|+.. ..+|+|+++..... ...+.|.+|++++++++||||+++++++.. +..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---DNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---CcEEEE
Confidence 357888999999999999999864 36899988764322 234678999999999999999999998743 457899
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+|||+++++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK--NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC--CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999999632 34689999999999999999999998 899999999999999999999999999986543
Q ss_pred cc-hhhhhccCCCCCccCCcccc---CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 560 DI-VFSMLKASAAMGYLAPEYTT---TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 560 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
.. ........||+.|+|||++. ...++.++|||||||++|||+||+.||...........................
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK 264 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCS
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhc
Confidence 11 12233457899999999986 566899999999999999999999999754332211111111111111122334
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
.++..+.+++.+||+.||++||++.|+++.|+.+.++
T Consensus 265 ~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 4567899999999999999999999999999988654
No 39
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3e-44 Score=365.55 Aligned_cols=257 Identities=23% Similarity=0.399 Sum_probs=213.7
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
.++|...+.||+|+||.||+|..+++..||+|++.... ...+++.+|++++++++||||+++++++.. .+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK--EYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEcc--CCceEEEE
Confidence 46788999999999999999999888899999997653 345789999999999999999999999944 46789999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH--QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT--TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999999743 24589999999999999999999998 8999999999999999999999999999877654
Q ss_pred chhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........+++.|+|||.+.+..++.++||||||+++|||+| |+.||............ ... .....+...+.
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-~~~----~~~~~~~~~~~ 232 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV-SQG----HRLYRPHLASD 232 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HTT----CCCCCCTTSCH
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH-HcC----CCCCCCCcChH
Confidence 4333334456778999999998889999999999999999999 99998765433221111 111 11112233456
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 233 TIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 79999999999999999999999999998864
No 40
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.4e-43 Score=370.67 Aligned_cols=261 Identities=18% Similarity=0.286 Sum_probs=214.4
Q ss_pred cccCHHHHHHHhcC----------CccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCC
Q 005859 390 FMFNLEEVERATQC----------FSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458 (673)
Q Consensus 390 ~~~~~~~l~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 458 (673)
..+++++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 35788888888764 677789999999999999987 59999999997654 3456789999999999999
Q ss_pred CCceeEeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCe
Q 005859 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538 (673)
Q Consensus 459 ~niv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NI 538 (673)
|||+++++++... +..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||
T Consensus 102 ~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NI 172 (321)
T 2c30_A 102 FNVVEMYKSYLVG--EELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ--GVIHRDIKSDSI 172 (321)
T ss_dssp TTBCCEEEEEEET--TEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGE
T ss_pred CCcceEEEEEEEC--CEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHE
Confidence 9999999999664 679999999999999999862 3589999999999999999999997 899999999999
Q ss_pred EecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhc
Q 005859 539 LIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618 (673)
Q Consensus 539 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~ 618 (673)
+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~ 251 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 251 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred EECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999999999999987654322 2234578999999999999999999999999999999999999986543322111
Q ss_pred cchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 619 SKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.....+.. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 252 -~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 252 -RLRDSPPPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HHHHSSCCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHhcCCCCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111111 122334578999999999999999999999986
No 41
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-43 Score=366.67 Aligned_cols=275 Identities=28% Similarity=0.508 Sum_probs=224.0
Q ss_pred cccCHHHHHHHhcCCccc------cccccCCcceEEEEEEcCCcEEEEEEecccCC---CCcHHHHHHHHHHHhccCCCC
Q 005859 390 FMFNLEEVERATQCFSEA------NLLGKSSFSATYKGILRDGSVVAVKCIAKTSC---KSDEGEFLKGLKILTSLKHEN 460 (673)
Q Consensus 390 ~~~~~~~l~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~n 460 (673)
..|+++++..++++|... +.||+|+||.||+|+. +++.||||++..... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999988 8899999999999987 588999999875431 223467999999999999999
Q ss_pred ceeEeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe
Q 005859 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540 (673)
Q Consensus 461 iv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl 540 (673)
|+++++++.. .+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||++
T Consensus 92 i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN--HHIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECS--SSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE
T ss_pred eEEEEEEEec--CCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEE
Confidence 9999999954 467899999999999999987432 234689999999999999999999987 89999999999999
Q ss_pred cCCCCeeeccccccccccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh--
Q 005859 541 HRRYNPLLSDSGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE-- 617 (673)
Q Consensus 541 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~-- 617 (673)
++++.+||+|||+++........ ......|+..|+|||.+.+ .++.++||||||+++|||+||+.||.........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 99999999999999876542211 1223568999999998864 5899999999999999999999998654321110
Q ss_pred --------ccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 618 --------SSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 618 --------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
...+...+++.. ...+...+..+.+++.+||+.||.+|||+++|++.|+++..|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s 307 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence 111223333332 245667788999999999999999999999999999998654
No 42
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.5e-44 Score=374.35 Aligned_cols=248 Identities=19% Similarity=0.322 Sum_probs=206.0
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+++|++++||||+++++++.. .+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET--EKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEE
Confidence 457999999999999999999974 6999999999765422 234678899999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~--~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQK--RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC--CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999999632 4589999999999999999999987 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCC-cchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFT-EKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
... .....+||+.|+|||++.+..++ .++||||+||++|||+||+.||............... .. ..+...
T Consensus 166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~--~~p~~~ 237 (328)
T 3fe3_A 166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG----KY--RIPFYM 237 (328)
T ss_dssp SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CC--CCCTTS
T ss_pred CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----CC--CCCCCC
Confidence 443 23456799999999999988765 8999999999999999999999765433222211111 11 123334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||++|||++|+++
T Consensus 238 s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 238 STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 578899999999999999999999975
No 43
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.2e-44 Score=398.61 Aligned_cols=260 Identities=23% Similarity=0.418 Sum_probs=216.6
Q ss_pred HhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
...+|...+.||+|+||.||+|++.. +..||||++.... ...++|.+|+++|++++|||||+++++|... +..++
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 293 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYI 293 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSCEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecC--CcEEE
Confidence 34568889999999999999999875 8899999997653 3567899999999999999999999999543 67899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++... ....+++..++.++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK--NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999743 234589999999999999999999998 89999999999999999999999999998776
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
...........+++.|+|||.+....++.++|||||||++|||+| |+.||........ .+.+........+..+
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~ 444 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKDYRMERPEGC 444 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----HHHHHTTCCCCCCTTC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCC
Confidence 544333334456788999999998899999999999999999999 9989865432211 1112222222344556
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
+.++.+|+.+||+.||++|||+.+|++.|+.+++.
T Consensus 445 ~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 445 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 68899999999999999999999999999988653
No 44
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-44 Score=379.23 Aligned_cols=269 Identities=18% Similarity=0.326 Sum_probs=216.2
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEcC------CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEE
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 468 (673)
.++....++|...+.||+|+||.||+|+..+ ++.||||++.........+.+.+|++++++++||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3444567899999999999999999999753 4889999997654333456799999999999999999999999
Q ss_pred ecCCCCeEEEEEeecCCCChhhhhccccCC--------------------ccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Q 005859 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGS--------------------EKVLEWATRISVIKGIAKGISYLHGKRPGL 528 (673)
Q Consensus 469 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~i 528 (673)
.. .+..++||||+++|+|.+++...... ...+++..++.++.||++||+|||++ ||
T Consensus 120 ~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--~i 195 (343)
T 1luf_A 120 AV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--KF 195 (343)
T ss_dssp CS--SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT--TC
T ss_pred cc--CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC--Ce
Confidence 54 46789999999999999999753211 15689999999999999999999998 89
Q ss_pred ccCCcCCCCeEecCCCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCC
Q 005859 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKC 606 (673)
Q Consensus 529 vHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~ 606 (673)
+||||||+||+++.++.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||+| |+.
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999987643321 12234567889999999998899999999999999999999 999
Q ss_pred CCChhhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 607 SITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 607 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
||........... +.+.. ....+...+.++.+++.+||+.||++|||+.++++.|+++.+.
T Consensus 276 p~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 276 PYYGMAHEEVIYY----VRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp TTTTSCHHHHHHH----HHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred cCCCCChHHHHHH----HhCCC-cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 9876433222111 11111 1123344567899999999999999999999999999998753
No 45
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.4e-44 Score=368.87 Aligned_cols=257 Identities=21% Similarity=0.367 Sum_probs=202.4
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhc--cCCCCceeEeeEEecC--CCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGICCSK--GRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~--~~~~~ 476 (673)
.++|...+.||+|+||+||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++... .....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46799999999999999999998 6899999998643 34566777777766 7999999999987543 23568
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHh--------cCCCCcccCCcCCCCeEecCCCCeee
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH--------GKRPGLVHPNLSAEKVLIHRRYNPLL 548 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~ivHrDlk~~NILl~~~~~~kl 548 (673)
++||||+++|+|.++++. ..+++..+++++.|++.||+||| +. ||+||||||+|||++.++.+||
T Consensus 82 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~--~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP--AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC--EEECSCCCGGGEEECTTSCEEE
T ss_pred EEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC--CeecCCCChHhEEEcCCCCEEE
Confidence 999999999999999952 35899999999999999999999 55 8999999999999999999999
Q ss_pred ccccccccccCcchh---hhhccCCCCCccCCccccCC------CCCcchhHHHHHHHHHHHHhC----------CCCCC
Q 005859 549 SDSGLHKLLADDIVF---SMLKASAAMGYLAPEYTTTG------RFTEKSDIYAFGMIVFQILSG----------KCSIT 609 (673)
Q Consensus 549 ~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSfGvvl~el~tG----------~~p~~ 609 (673)
+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 999999876543221 12234789999999999876 456799999999999999999 77775
Q ss_pred hhhHhhhhccchhh-----hcCCcCCC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005859 610 PFTRQAAESSKVED-----FIDPNLEG-KFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669 (673)
Q Consensus 610 ~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i 669 (673)
.............. ...+.... ..+...+.++.+++.+||+.||++|||+.||++.|++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 43211111111111 11111111 12345678899999999999999999999999999986
No 46
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.5e-44 Score=392.78 Aligned_cols=259 Identities=23% Similarity=0.408 Sum_probs=208.9
Q ss_pred HhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
..++|...+.||+|+||.||+|.+.++..||||++.... ...++|.+|+++|++++||||+++++++.. +..++|
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~~iv 256 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIV 256 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC---CceEEE
Confidence 346788889999999999999999888889999997653 346789999999999999999999999853 567999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~--~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999997431 24589999999999999999999998 799999999999999999999999999987765
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........++..|+|||.+....++.++|||||||++|||+| |+.||........... +.. ......+..++
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~----~~~~~~~~~~~ 407 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VER----GYRMPCPPECP 407 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHT----TCCCCCCTTSC
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHc----CCCCCCCCCCC
Confidence 43333334456788999999998899999999999999999999 9999876543322111 111 11122334556
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
..+.+++.+||+.||++|||++++++.|++++.+
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999998764
No 47
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.8e-44 Score=367.55 Aligned_cols=258 Identities=22% Similarity=0.370 Sum_probs=199.6
Q ss_pred hcCCccccccccCCcceEEEEEEcC----CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|...+.||+|+||.||+|+... +..||+|.+.........+.+.+|+.++++++||||+++++++.. +..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---SSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc---Ccc
Confidence 4678899999999999999999753 457999998765433445679999999999999999999999832 467
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC--CeecccccHHHEEECCCCCEEECccccccc
Confidence 8999999999999999743 23589999999999999999999997 899999999999999999999999999987
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
.............+++.|+|||.+....++.++||||||+++|||++ |+.||......... ..+.. ......+.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~----~~i~~-~~~~~~~~ 240 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI----GRIEN-GERLPMPP 240 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH----HHHHT-TCCCCCCT
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH----HHHHc-CCCCCCCC
Confidence 76544333344456788999999998899999999999999999997 99898654322111 11111 11112334
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+..+.+++.+||+.||++|||+.|+++.|+++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999875
No 48
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=381.78 Aligned_cols=262 Identities=20% Similarity=0.312 Sum_probs=210.8
Q ss_pred hcCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (673)
.++|...+.||+|+||+||+|++. +++.||||++..........++.+|+.++++++||||+++++++.. .+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--SL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec--CC
Confidence 457888999999999999999953 3678999999765434445679999999999999999999999954 46
Q ss_pred eEEEEEeecCCCChhhhhccccC---CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC---Ceee
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAG---SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY---NPLL 548 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~---~~kl 548 (673)
..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ ||+||||||+|||++.++ .+||
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC--CeeCCCCChhhEEEecCCCCceEEE
Confidence 67999999999999999975432 224589999999999999999999998 899999999999999555 5999
Q ss_pred ccccccccccCcc-hhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcC
Q 005859 549 SDSGLHKLLADDI-VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFID 626 (673)
Q Consensus 549 ~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~ 626 (673)
+|||+++...... ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||........... +.
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~-i~---- 300 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF-VT---- 300 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HH----
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH----
Confidence 9999998653321 112233457889999999998899999999999999999998 9999876433222111 11
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.......+...+..+.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus 301 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 301 SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 111122334455789999999999999999999999999998764
No 49
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5e-44 Score=375.04 Aligned_cols=257 Identities=22% Similarity=0.384 Sum_probs=203.8
Q ss_pred cCCccccccccCCcceEEEEEEcC-Cc----EEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GS----VVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
++|+..+.||+|+||+||+|++.. ++ .||+|.+.........++|.+|++++++++||||++++++|... ..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 91 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TV 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS---SE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC---Ce
Confidence 568889999999999999999653 44 46888886554445567899999999999999999999999653 47
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++|+||+++|+|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC--CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 8999999999999999743 24589999999999999999999998 899999999999999999999999999987
Q ss_pred ccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 557 LADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 557 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
...... .......+|..|+|||++.+..++.++|||||||++|||+| |+.||........ ...+........+
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~ 241 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-----SSILEKGERLPQP 241 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH-----HHHHHcCCCCCCC
Confidence 654322 12233456788999999999999999999999999999999 9999875433221 1111112222234
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
...+.++.+++.+||+.||++||++.|+++.|+++..
T Consensus 242 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 242 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 4456789999999999999999999999999998764
No 50
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=380.90 Aligned_cols=263 Identities=21% Similarity=0.372 Sum_probs=213.9
Q ss_pred HhcCCccccccccCCcceEEEEEEc--------CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEec
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR--------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCS 470 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 470 (673)
..++|...+.||+|+||+||+|+.. ++..||||++.........+++.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3467889999999999999999853 24579999997664334457899999999999 99999999999954
Q ss_pred CCCCeEEEEEeecCCCChhhhhccccC------------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCe
Q 005859 471 KGRGECFLIYDFVPNGNLLQHLDLEAG------------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538 (673)
Q Consensus 471 ~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NI 538 (673)
.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+. ||+||||||+||
T Consensus 147 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NI 222 (382)
T 3tt0_A 147 --DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCIHRDLAARNV 222 (382)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGE
T ss_pred --CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCcceE
Confidence 4678999999999999999975431 124599999999999999999999988 899999999999
Q ss_pred EecCCCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhh
Q 005859 539 LIHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAA 616 (673)
Q Consensus 539 Ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~ 616 (673)
|+++++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||+| |+.||........
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~ 302 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999987654322 12334456788999999999999999999999999999999 9999865433221
Q ss_pred hccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 617 ESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.. .+.. ......+...+.++.+++.+||+.||++|||++||++.|++++.
T Consensus 303 ~~-~~~~----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 303 FK-LLKE----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp HH-HHHT----TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH-HHHc----CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 1111 11222334456789999999999999999999999999999875
No 51
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.3e-44 Score=370.82 Aligned_cols=263 Identities=21% Similarity=0.364 Sum_probs=213.1
Q ss_pred HhcCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR 473 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (673)
..++|...+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++.. .
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~ 98 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--D 98 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--S
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec--C
Confidence 3567889999999999999999862 3578999999765433445688999999999999999999999854 4
Q ss_pred CeEEEEEeecCCCChhhhhccccC--------------------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAG--------------------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNL 533 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDl 533 (673)
+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ ||+||||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~di 176 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM--KLVHRDL 176 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT--TEECCCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC--CCccccc
Confidence 678999999999999999975322 123589999999999999999999998 8999999
Q ss_pred CCCCeEecCCCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChh
Q 005859 534 SAEKVLIHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPF 611 (673)
Q Consensus 534 k~~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~ 611 (673)
||+||++++++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999987644321 12233456788999999998889999999999999999999 99998654
Q ss_pred hHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 612 TRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
...... ..+........+...+.++.+++.+||+.||++|||+.|+++.|++++.
T Consensus 257 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 257 PPERLF-----NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp CGGGHH-----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHH-----HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 322111 1111111222334456789999999999999999999999999999875
No 52
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.1e-43 Score=358.23 Aligned_cols=257 Identities=16% Similarity=0.286 Sum_probs=210.4
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||.||+|+.+ ++.||||++...... ...+.|.+|++++++++||||+++++++.....+..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888999999999999999985 889999999765422 2346799999999999999999999999766557889999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++|+|.+++... ....+++..++.++.|++.||+|||+..++|+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp ECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred cccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 999999999999743 22358999999999999999999999733499999999999999999999999888764332
Q ss_pred chhhhhccCCCCCccCCccccCCCCCc---chhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGRFTE---KSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~~s~---ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
....+|+.|+|||.+.+..++. ++||||||+++|||+||+.||.................. ...+...
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~ 236 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR----PTIPPGI 236 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC----CCCCTTC
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC----CCCCCCC
Confidence 2346789999999998765544 899999999999999999999765443322222222222 2333445
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 237 SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 6789999999999999999999999999998864
No 53
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.9e-43 Score=386.70 Aligned_cols=254 Identities=24% Similarity=0.430 Sum_probs=209.8
Q ss_pred HhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
..++|...+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+++|++++||||+++++++... .+..++|
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~iv 265 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIV 265 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-TSCEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-CCceEEE
Confidence 3467888999999999999999985 7899999997643 456899999999999999999999998654 3468999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 99999999999997432 23479999999999999999999998 799999999999999999999999999985543
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
. .....++..|+|||.+.+..++.++|||||||++|||+| |+.||.......... .+. .......+..++
T Consensus 342 ~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~-~i~----~~~~~~~p~~~~ 412 (450)
T 1k9a_A 342 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-RVE----KGYKMDAPDGCP 412 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH-HHH----TTCCCCCCTTCC
T ss_pred c----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH----cCCCCCCCCcCC
Confidence 2 122356889999999999999999999999999999999 999987543222111 111 112223344566
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.++.++|.+||+.||++|||+.++++.|+++..
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 889999999999999999999999999999865
No 54
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.7e-43 Score=359.53 Aligned_cols=258 Identities=22% Similarity=0.395 Sum_probs=214.3
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
.++|...+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++.. .+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE--QAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcc--CCCeEEEE
Confidence 35788899999999999999999888999999997653 345789999999999999999999999954 46789999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999999743 24589999999999999999999998 8999999999999999999999999999876554
Q ss_pred chhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........++..|+|||.+.+..++.++||||||+++|||+| |+.||........... +... .....+...+.
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-i~~~----~~~~~~~~~~~ 232 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTG----FRLYKPRLAST 232 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-HHTT----CCCCCCTTSCH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH-HhcC----CcCCCCccCcH
Confidence 3333344556788999999998889999999999999999999 8989865433222111 1111 11122333457
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
.+.+++.+||+.||++|||+.++++.|+++.++
T Consensus 233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 233 HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999765
No 55
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=363.25 Aligned_cols=251 Identities=17% Similarity=0.280 Sum_probs=199.0
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC-------------------------cHHHHHHHHHHHhc
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-------------------------DEGEFLKGLKILTS 455 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------------------~~~~~~~E~~~l~~ 455 (673)
++|...+.||+|+||.||+|+.. +++.||||++....... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57889999999999999999975 48899999997643211 12568999999999
Q ss_pred cCCCCceeEeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCC
Q 005859 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535 (673)
Q Consensus 456 l~H~niv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~ 535 (673)
++||||+++++++.....+..++||||+++|+|.+++. ...+++..+..++.||+.||+|||+. ||+||||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp 165 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ--KIIHRDIKP 165 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCH
Confidence 99999999999997655678999999999999988764 24689999999999999999999998 899999999
Q ss_pred CCeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCC---CCcchhHHHHHHHHHHHHhCCCCCChhh
Q 005859 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR---FTEKSDIYAFGMIVFQILSGKCSITPFT 612 (673)
Q Consensus 536 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSfGvvl~el~tG~~p~~~~~ 612 (673)
+|||++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 999999999999999999987654321 123457899999999998655 4789999999999999999999997543
Q ss_pred HhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 613 RQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
........... ..........+.++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IMCLHSKIKSQ----ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHHHC----CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHhcc----cCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 22211111111 1111111234578999999999999999999999875
No 56
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-43 Score=368.02 Aligned_cols=265 Identities=23% Similarity=0.350 Sum_probs=209.9
Q ss_pred cCCccccccccCCcceEEEEEE-----cCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGIL-----RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
..|+..+.||+|+||.||+|++ .+++.||||++.........+.+.+|++++++++||||+++++++.....+..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588889999999999999984 35889999999866545556789999999999999999999999977655778
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR--QYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC--CcccCCCchheEEEcCCCCEEECccccccc
Confidence 9999999999999999643 24589999999999999999999997 899999999999999999999999999987
Q ss_pred ccCcch--hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh----------hccchhhh
Q 005859 557 LADDIV--FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA----------ESSKVEDF 624 (673)
Q Consensus 557 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~----------~~~~~~~~ 624 (673)
...... .......+|..|+|||.+.+..++.++||||||+++|||+||+.|+........ ........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 654321 122344578889999999988999999999999999999999987643211100 00111111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.........+...+..+.+++.+||+.||++|||+.|+++.|+++++
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 11222223344556789999999999999999999999999999874
No 57
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.3e-43 Score=370.73 Aligned_cols=248 Identities=19% Similarity=0.296 Sum_probs=205.4
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccC--CCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTS--CKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|+..+.||+|+||+||+|+.. +|+.||||++.+.. .......+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~l 82 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCF 82 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC--SSEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe--CCEEEE
Confidence 57899999999999999999976 48999999997642 13345678999999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus 83 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 9999999999999873 34689999999999999999999998 89999999999999999999999999998643
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||............... . ..++...+
T Consensus 157 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~----~--~~~p~~~s 229 (337)
T 1o6l_A 157 SDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME----E--IRFPRTLS 229 (337)
T ss_dssp CTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----C--CCCCTTSC
T ss_pred cCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC----C--CCCCCCCC
Confidence 3211 233457899999999999999999999999999999999999999754332222111111 1 12333455
Q ss_pred HHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRP-----SIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RP-----s~~evl~ 664 (673)
.++.+++.+||+.||++|| +++|+++
T Consensus 230 ~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 7899999999999999999 8999875
No 58
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.2e-43 Score=374.31 Aligned_cols=252 Identities=21% Similarity=0.335 Sum_probs=205.9
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC-----cHHHHHHHHHHHhccCCCCceeEeeEEecCCCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-----DEGEFLKGLKILTSLKHENLASLRGICCSKGRG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (673)
.++|...+.||+|+||+||+|+.. +|+.||+|++.+..... ..+.+.+|+++|++++||||+++++++.. .+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~ 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN--RT 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SS
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe--CC
Confidence 457899999999999999999976 48999999998754321 34689999999999999999999999954 47
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC----Ceeecc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY----NPLLSD 550 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~----~~kl~D 550 (673)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||+++++ .+||+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 89999999999999999963 34689999999999999999999998 899999999999998877 799999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCC
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLE 630 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||................. ...
T Consensus 163 FG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~ 238 (361)
T 2yab_A 163 FGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY--DFD 238 (361)
T ss_dssp CSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCC
T ss_pred cCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCC
Confidence 99998765532 22345799999999999988999999999999999999999999976433322211111100 011
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 631 GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 631 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.......+..+.+++.+||..||++|||+.|+++
T Consensus 239 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111223567899999999999999999999984
No 59
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.5e-43 Score=358.95 Aligned_cols=255 Identities=24% Similarity=0.457 Sum_probs=204.9
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcH------HHHHHHHHHHhccCCCCceeEeeEEecCCCC
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDE------GEFLKGLKILTSLKHENLASLRGICCSKGRG 474 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (673)
++|...+.||+|+||+||+|+.. +++.||||++......... +.+.+|++++++++||||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--- 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT---
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC---
Confidence 57888999999999999999975 5899999998765432222 6789999999999999999999998432
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC-----eeec
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN-----PLLS 549 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~-----~kl~ 549 (673)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+..++|+||||||+||+++.++. +||+
T Consensus 96 -~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 96 -PRMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp -TEEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred -CeEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 26999999999999888632 34699999999999999999999998223999999999999988776 9999
Q ss_pred cccccccccCcchhhhhccCCCCCccCCcccc--CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCC
Q 005859 550 DSGLHKLLADDIVFSMLKASAAMGYLAPEYTT--TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP 627 (673)
Q Consensus 550 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~ 627 (673)
|||+++..... .....|++.|+|||.+. ...++.++|||||||++|||++|+.||......... ........
T Consensus 172 Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~ 245 (287)
T 4f0f_A 172 DFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREE 245 (287)
T ss_dssp CCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH--HHHHHHHS
T ss_pred CCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH--HHHHHhcc
Confidence 99999855432 23456899999999984 455899999999999999999999998654321110 01111112
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005859 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669 (673)
Q Consensus 628 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i 669 (673)
......+...+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 246 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 222334445568899999999999999999999999999875
No 60
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=379.90 Aligned_cols=265 Identities=18% Similarity=0.307 Sum_probs=216.3
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+... |+.||||++.........+.+.+|++++++++||||+++++++........++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 578899999999999999999875 8999999998655445567889999999999999999999999776556789999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe----cCCCCeeecccccccc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI----HRRYNPLLSDSGLHKL 556 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl----~~~~~~kl~DfGla~~ 556 (673)
||+++|+|.+++.... ....+++..++.++.||+.||+|||++ ||+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC--CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997432 123389999999999999999999998 89999999999999 7778899999999987
Q ss_pred ccCcchhhhhccCCCCCccCCccccC--------CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcC--
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTT--------GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID-- 626 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~-- 626 (673)
...... .....||..|+|||++.+ ..++.++|||||||++|||+||+.||.+..........+..+..
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp CCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred ccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 755432 234568999999999864 46789999999999999999999998653221111111111100
Q ss_pred ---------------------CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 627 ---------------------PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 627 ---------------------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.......+...+..+.+++.+||+.||++||+++|+++.++++++
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 011123456778899999999999999999999999999999876
No 61
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.4e-43 Score=368.42 Aligned_cols=262 Identities=21% Similarity=0.338 Sum_probs=213.0
Q ss_pred CCccccccccCCcceEEEEEEc-----CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 403 CFSEANLLGKSSFSATYKGILR-----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.|...+.||+|+||+||++.++ +++.||||++.........+.+.+|++++++++||||+++++++...+....+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3488899999999999998753 48899999998654334456799999999999999999999999876667899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++.. ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 112 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~--~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ--HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999963 2489999999999999999999998 8999999999999999999999999999877
Q ss_pred cCcch--hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh----------hccchhhhc
Q 005859 558 ADDIV--FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA----------ESSKVEDFI 625 (673)
Q Consensus 558 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~----------~~~~~~~~~ 625 (673)
..... .......++..|+|||.+.+..++.++||||||+++|||+||+.||........ ....+.+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 54321 122344577889999999988899999999999999999999998865322110 001112222
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 626 DPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
........+...+.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 265 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 265 ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 2222333445566889999999999999999999999999998864
No 62
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-43 Score=396.67 Aligned_cols=259 Identities=23% Similarity=0.408 Sum_probs=215.4
Q ss_pred HhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
..++|...+.||+|+||+||+|++.++..||||+++... ...++|.+|+++|++++||||+++++++.. +..++|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~lv 339 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIV 339 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee---ccceEe
Confidence 456788899999999999999999888899999997653 346789999999999999999999999853 567999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++.... ...+++..++.|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~--~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999997431 24589999999999999999999998 799999999999999999999999999987765
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........++..|+|||.+....++.++|||||||++|||+| |+.||........... +.. ......+..++
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~-i~~----~~~~~~~~~~~ 490 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VER----GYRMPCPPECP 490 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHH-HHT----TCCCCCCTTCC
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHc----CCCCCCCCCCC
Confidence 43333334456788999999998899999999999999999999 9999876543322111 111 11122334556
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
..+.+||.+||+.||++|||+++|++.|++++.+
T Consensus 491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 7899999999999999999999999999998764
No 63
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.6e-43 Score=366.92 Aligned_cols=265 Identities=21% Similarity=0.368 Sum_probs=213.4
Q ss_pred HhcCCccccccccCCcceEEEEEE------cCCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCC
Q 005859 400 ATQCFSEANLLGKSSFSATYKGIL------RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKG 472 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 472 (673)
..++|...+.||+|+||.||+|+. .+++.||||++.........+.+.+|+++++++ +||||+++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 98 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec--
Confidence 346788999999999999999985 236799999997654334457899999999999 99999999999954
Q ss_pred CCeEEEEEeecCCCChhhhhccccC--------------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCe
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAG--------------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NI 538 (673)
.+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ ||+||||||+||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Ni 176 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNI 176 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGE
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCccceE
Confidence 4678999999999999999975421 123589999999999999999999998 899999999999
Q ss_pred EecCCCCeeeccccccccccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhh
Q 005859 539 LIHRRYNPLLSDSGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAA 616 (673)
Q Consensus 539 Ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~ 616 (673)
+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999876544321 1223346778999999998899999999999999999999 9999865432211
Q ss_pred hccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 617 ESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
......... ....+...+.++.+++.+||+.||.+|||+.|+++.|++++..
T Consensus 257 ~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 FYKMIKEGF----RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHHTC----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccCC----CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111122211 1222334557899999999999999999999999999998753
No 64
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.8e-44 Score=365.99 Aligned_cols=259 Identities=23% Similarity=0.415 Sum_probs=215.2
Q ss_pred HhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
..++|...+.||+|+||.||+|.... +..||+|.+... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--EPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC--STHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--CCCEEE
Confidence 45678899999999999999999875 889999999754 3355789999999999999999999999854 467899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++... ....+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++...
T Consensus 87 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH--TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC--CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999999743 234689999999999999999999987 79999999999999999999999999998776
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
...........+++.|+|||.+.+..++.++||||||+++|||++ |+.||......... +.+........+...
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~ 237 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKDYRMERPEGC 237 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-----HHHHTTCCCCCCTTC
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHhccCCCCCCCCC
Confidence 544333334456788999999998899999999999999999999 98888654322111 111112222333445
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+..+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 238 ~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998865
No 65
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-43 Score=362.55 Aligned_cols=261 Identities=20% Similarity=0.361 Sum_probs=198.5
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||+||+|+.. ..||||++...... ...+.|.+|++++++++||||+++++++. .+..++|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---~~~~~lv 97 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---APQLAIV 97 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---SSSCEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc---CCccEEE
Confidence 457899999999999999999864 35999999765422 23467899999999999999999999763 2457899
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++++|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~--~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC--CcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999999999632 35689999999999999999999997 899999999999999999999999999986543
Q ss_pred cc-hhhhhccCCCCCccCCcccc---CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 560 DI-VFSMLKASAAMGYLAPEYTT---TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 560 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
.. ........|+..|+|||.+. ...++.++||||||+++|||+||+.||............+..............
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS 252 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCT
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccc
Confidence 21 11223456899999999987 566899999999999999999999999764332221111111111111122334
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.++.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 556889999999999999999999999999999864
No 66
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.3e-43 Score=369.20 Aligned_cols=252 Identities=20% Similarity=0.305 Sum_probs=201.6
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~lv~ 84 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE--GNIQYLFL 84 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec--CCeEEEEE
Confidence 57899999999999999999976 5899999999765433444678999999999999999999999954 47889999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~--givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 85 EYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp ECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 99999999999962 34589999999999999999999987 8999999999999999999999999999865432
Q ss_pred c-hhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 561 I-VFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 561 ~-~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
. ........||+.|+|||++.+..+ +.++|||||||++|||+||+.||......... .................+
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 235 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE---YSDWKEKKTYLNPWKKID 235 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH---HHHHHTTCTTSTTGGGSC
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH---HHHHhcccccCCccccCC
Confidence 2 112234578999999999987775 78999999999999999999999654322111 111111111111123455
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 236 SAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhh
Confidence 78899999999999999999999975
No 67
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.9e-43 Score=367.77 Aligned_cols=254 Identities=17% Similarity=0.279 Sum_probs=202.5
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC------
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR------ 473 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 473 (673)
.++|+..+.||+|+||.||+|+.. +|+.||||++.........+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457899999999999999999987 6999999999865544456789999999999999999999999865432
Q ss_pred -------------------------------------------------CeEEEEEeecCCCChhhhhccccCCccccCH
Q 005859 474 -------------------------------------------------GECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504 (673)
Q Consensus 474 -------------------------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~ 504 (673)
...++||||+++|+|.+++.... .....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchhh
Confidence 13799999999999999997542 3355678
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCcch-----------hhhhccCCCCC
Q 005859 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIV-----------FSMLKASAAMG 573 (673)
Q Consensus 505 ~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~~ 573 (673)
..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++....... .......||+.
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHHhC--CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 88999999999999999987 899999999999999999999999999987765321 11233468999
Q ss_pred ccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCC
Q 005859 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESP 653 (673)
Q Consensus 574 y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p 653 (673)
|+|||++.+..++.++|||||||++|||++|..|+...... ........ ........+.++.+++.+||+.||
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p 314 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI------ITDVRNLK-FPLLFTQKYPQEHMMVQDMLSPSP 314 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH------HHHHHTTC-CCHHHHHHCHHHHHHHHHHHCSSG
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH------HHHhhccC-CCcccccCChhHHHHHHHHccCCC
Confidence 99999999999999999999999999999987654322111 11111111 111123345678999999999999
Q ss_pred CCCCCHHHHHH
Q 005859 654 SHRPSIENVMQ 664 (673)
Q Consensus 654 ~~RPs~~evl~ 664 (673)
++|||+.|+++
T Consensus 315 ~~Rps~~~~l~ 325 (332)
T 3qd2_B 315 TERPEATDIIE 325 (332)
T ss_dssp GGSCCHHHHHH
T ss_pred CcCCCHHHHhh
Confidence 99999999986
No 68
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.1e-43 Score=360.22 Aligned_cols=257 Identities=22% Similarity=0.390 Sum_probs=212.8
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
.++|...+.||+|+||.||+|...+++.||||.+.... ...+.+.+|++++++++||||+++++++.. +..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---EPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEcC---CCcEEEE
Confidence 46788899999999999999999888899999997653 356789999999999999999999999843 4578999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++++|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||++++++.+||+|||+++.....
T Consensus 87 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999996321 23589999999999999999999988 8999999999999999999999999999877654
Q ss_pred chhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........++..|+|||.+.+..++.++||||||+++|||+| |+.||........... +... .....+...+.
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~----~~~~~~~~~~~ 237 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN-LERG----YRMVRPDNCPE 237 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTT----CCCCCCTTCCH
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH-Hhcc----cCCCCcccccH
Confidence 3333334456788999999988889999999999999999999 8989865433221111 1111 11122334557
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
++.+++.+||+.||++|||++++++.|++++.
T Consensus 238 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999998864
No 69
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-43 Score=367.09 Aligned_cols=251 Identities=20% Similarity=0.326 Sum_probs=204.6
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-----CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-----SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
++|...+.||+|+||.||+|+.. +|+.||+|++...... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~ 88 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN--KTD 88 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCE
Confidence 46889999999999999999976 4899999999765422 135789999999999999999999999954 478
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC----Ceeeccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY----NPLLSDS 551 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~----~~kl~Df 551 (673)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++ .+||+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC--CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999999963 34689999999999999999999987 899999999999999887 7999999
Q ss_pred cccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCC
Q 005859 552 GLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631 (673)
Q Consensus 552 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|+++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||............... ......
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~--~~~~~~ 238 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV--NYEFED 238 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHT--CCCCCH
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhc--CCCcCc
Confidence 9998765432 223456899999999999889999999999999999999999999654332211111100 111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 632 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111223567899999999999999999999986
No 70
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-43 Score=371.25 Aligned_cols=266 Identities=24% Similarity=0.369 Sum_probs=210.3
Q ss_pred HHhcCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecC
Q 005859 399 RATQCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSK 471 (673)
Q Consensus 399 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 471 (673)
...++|...+.||+|+||.||+|+.. +++.||||++.........+.+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 120 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL- 120 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-
Confidence 34578999999999999999999962 35689999998654444557899999999999 99999999999955
Q ss_pred CCCeEEEEEeecCCCChhhhhccccCC-------------------ccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Q 005859 472 GRGECFLIYDFVPNGNLLQHLDLEAGS-------------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532 (673)
Q Consensus 472 ~~~~~~lv~E~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrD 532 (673)
.+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. ||+|||
T Consensus 121 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~D 197 (344)
T 1rjb_A 121 -SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--SCVHRD 197 (344)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT--TEEETT
T ss_pred -CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC--CcccCC
Confidence 46789999999999999999743211 13489999999999999999999997 899999
Q ss_pred cCCCCeEecCCCCeeeccccccccccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCh
Q 005859 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITP 610 (673)
Q Consensus 533 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~ 610 (673)
|||+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543221 1223456788999999998899999999999999999998 9999865
Q ss_pred hhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 611 FTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
..........+. .......+...+.++.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 278 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 278 IPVDANFYKLIQ----NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CCCSHHHHHHHH----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CCcHHHHHHHHh----cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 432211111111 1222223344567899999999999999999999999999988653
No 71
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-43 Score=368.47 Aligned_cols=251 Identities=16% Similarity=0.214 Sum_probs=205.0
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||.||+|+... ++.||+|.+... ..+...+.+|+++++.++||||+++++++.+. +..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFESM--EELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEET--TEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEecC--CEEEEE
Confidence 4678999999999999999999764 889999998754 23456788999999999999999999999654 789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC--CCCeeeccccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR--RYNPLLSDSGLHKLL 557 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~--~~~~kl~DfGla~~~ 557 (673)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+|||++. ++.+||+|||+++..
T Consensus 80 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~--givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH--NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9999999999999632 24689999999999999999999998 8999999999999987 789999999999877
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.................. .........
T Consensus 155 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~ 230 (321)
T 1tki_A 155 KPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEI 230 (321)
T ss_dssp CTTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTS
T ss_pred CCCCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC--CChhhhccC
Confidence 54332 23456899999999999888999999999999999999999999764433222111111110 000001123
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||++|||+.|+++
T Consensus 231 s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 231 SIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 578899999999999999999999986
No 72
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.5e-43 Score=361.44 Aligned_cols=258 Identities=22% Similarity=0.337 Sum_probs=206.4
Q ss_pred hcCCccccccccCCcceEEEEEEcC----CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|...+.||+|+||.||+|+..+ +..||+|.+.........+.+.+|++++++++||||+++++++.. +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE---EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS---SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCC
Confidence 4578889999999999999998653 346999999765433445789999999999999999999999843 346
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++++|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 8999999999999999743 24589999999999999999999987 899999999999999999999999999987
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
.............++..|+|||.+.+..++.++||||||+++|||+| |+.||.......... .+..... ...+.
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~-~~~~~~~----~~~~~ 237 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKGDR----LPKPD 237 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH-HHHHTCC----CCCCT
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH-HHhcCCC----CCCCC
Confidence 66543333344557788999999988899999999999999999999 999986433221111 1111111 11223
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+..+.+++.+||+.||++|||+.|+++.|+++++
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999865
No 73
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1e-43 Score=385.35 Aligned_cols=265 Identities=16% Similarity=0.222 Sum_probs=212.9
Q ss_pred cCHHHHHHHhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEE
Q 005859 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGIC 468 (673)
Q Consensus 392 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 468 (673)
+.+.++...+++|+..+.||+|+||+||+|+.++ ++.||||++.+... ......+.+|++++..++||||++++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3456677778999999999999999999999875 88999999975321 12234588999999999999999999999
Q ss_pred ecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeee
Q 005859 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548 (673)
Q Consensus 469 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl 548 (673)
.+ .+..++|||||++|+|.+++... ...+++..+..++.||+.||+|||+. |||||||||+|||++.++.+||
T Consensus 144 ~~--~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~--giiHrDLKp~NILl~~~g~vkL 216 (437)
T 4aw2_A 144 QD--DNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL--HYVHRDIKPDNILMDMNGHIRL 216 (437)
T ss_dssp EC--SSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEE
T ss_pred ee--CCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC--CeEecccCHHHeeEcCCCCEEE
Confidence 55 47899999999999999999742 34699999999999999999999987 8999999999999999999999
Q ss_pred ccccccccccCcchhhhhccCCCCCccCCcccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhh
Q 005859 549 SDSGLHKLLADDIVFSMLKASAAMGYLAPEYTT-----TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED 623 (673)
Q Consensus 549 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~ 623 (673)
+|||+++.............+||+.|+|||++. ...|+.++|||||||++|||+||+.||............+..
T Consensus 217 ~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 296 (437)
T 4aw2_A 217 ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296 (437)
T ss_dssp CCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred cchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhc
Confidence 999999876554333334467999999999987 567999999999999999999999999765433322222211
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 005859 624 FIDPNLEGKFSVSEASNLGQIALHCTHESPSH--RPSIENVMQ 664 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~ 664 (673)
....... ......+.++.+++.+||..+|++ ||+++|+++
T Consensus 297 ~~~~~~p-~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 297 KERFQFP-TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHCCCC-SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cccccCC-cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111111 111234578899999999888888 999999875
No 74
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-43 Score=375.63 Aligned_cols=260 Identities=22% Similarity=0.365 Sum_probs=197.8
Q ss_pred cCCccccccccCCcceEEEEEEcC----CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
..|...+.||+|+||+||+|+..+ +..||||.+.........++|.+|++++++++||||+++++++... .+..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-SSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CCCeE
Confidence 346677899999999999998642 2468999987654344457899999999999999999999987543 35678
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++... ...+++..++.++.||++||+|||+. ||+||||||+|||+++++.+||+|||+++..
T Consensus 168 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK--KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC--CEecCccchheEEECCCCCEEEeeccccccc
Confidence 999999999999999732 34588999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcchh---hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 558 ADDIVF---SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 558 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
...... ......+++.|+|||.+.+..++.++|||||||++|||+| |..||.......... .+... .....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~-~~~~~----~~~~~ 317 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-YLLQG----RRLLQ 317 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHH-HHHTT----CCCCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHH-HHHcC----CCCCC
Confidence 443211 1233456788999999999999999999999999999999 566665432211111 11111 11122
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
+...+..+.+++.+||+.||++|||+.|+++.|++++.+
T Consensus 318 p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 318 PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 334567899999999999999999999999999998764
No 75
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.8e-43 Score=369.08 Aligned_cols=257 Identities=22% Similarity=0.373 Sum_probs=205.1
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcE----EEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSV----VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
++|...+.||+|+||+||+|++.. ++. ||+|.+...........+.+|+.++++++||||+++++++.. +..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG---SSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB---SSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---Ccc
Confidence 468888999999999999999654 443 888887655433444678899999999999999999999843 568
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH--GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT--TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC--CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 8999999999999999742 34689999999999999999999998 899999999999999999999999999987
Q ss_pred ccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 557 LADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 557 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
....... ......++..|+|||++.+..++.++|||||||++|||+| |+.||......... ..+........+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~ 239 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-----DLLEKGERLAQP 239 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH-----HHHHTTCBCCCC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH-----HHHHcCCCCCCC
Confidence 7543221 2234557789999999998899999999999999999999 99998754322111 111111111222
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 240 QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 3344578899999999999999999999999998864
No 76
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9e-43 Score=355.12 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=196.3
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCC---CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSC---KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||.||+|+.. ++.||||++..... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 83 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK--EPNLCL 83 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC--C--CEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec--CCceEE
Confidence 57888999999999999999975 88999999876432 1234678999999999999999999999954 467899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCC-CCcccCCcCCCCeEecC--------CCCeeec
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHR--------RYNPLLS 549 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-~~ivHrDlk~~NILl~~--------~~~~kl~ 549 (673)
||||+++++|.+++. ...+++..+..++.|++.||+|||+.. .+|+||||||+||+++. ++.+||+
T Consensus 84 v~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999985 246899999999999999999999972 12999999999999986 6789999
Q ss_pred cccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcC
Q 005859 550 DSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNL 629 (673)
Q Consensus 550 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
|||+++...... .....|++.|+|||.+.+..++.++||||||+++|||+||+.||............. ....
T Consensus 159 Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----~~~~ 231 (271)
T 3dtc_A 159 DFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA----MNKL 231 (271)
T ss_dssp CCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH----TSCC
T ss_pred cCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh----cCCC
Confidence 999998665432 223468999999999998889999999999999999999999997654332222111 1122
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005859 630 EGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669 (673)
Q Consensus 630 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i 669 (673)
....+...+..+.+++.+||+.||++|||+.|+++.|++|
T Consensus 232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 2233444567899999999999999999999999999865
No 77
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.8e-43 Score=371.30 Aligned_cols=252 Identities=15% Similarity=0.227 Sum_probs=194.7
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||+||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILT--PTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEee--CCEEEEE
Confidence 357899999999999999999987 58999999997653 334678999999999999999999999965 4789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC--eeeccccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN--PLLSDSGLHKLL 557 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~--~kl~DfGla~~~ 557 (673)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~--~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM--QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 999999999999863 24589999999999999999999987 8999999999999987765 999999999754
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcc-hhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEK-SDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k-sDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.... ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||............+..+............
T Consensus 169 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
T 3uc3_A 169 VLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR 246 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSC
T ss_pred cccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCC
Confidence 3221 2234568999999999988887655 899999999999999999997643322222222222222221111223
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 637 EASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.++.+++.+||+.||++|||+.|+++
T Consensus 247 ~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 247 ISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 4578899999999999999999999985
No 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=9.2e-43 Score=370.33 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=205.6
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
..++|...+.||+|+||.||+|... +|+.||+|++...... ...+.+.+|++++++++||||+++++++.+ .+..+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~--~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEE
Confidence 3567999999999999999999976 4899999999765422 234678899999999999999999999955 47889
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC---Ceeecccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY---NPLLSDSGLH 554 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~---~~kl~DfGla 554 (673)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++ .+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~--~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 99999999999999863 34689999999999999999999998 899999999999998654 5999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||................. .......
T Consensus 179 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~ 254 (362)
T 2bdw_A 179 IEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY--DYPSPEW 254 (362)
T ss_dssp BCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTGG
T ss_pred eEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC--CCCcccc
Confidence 8765432 22345789999999999998999999999999999999999999976433222211111111 1111112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 255 DTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp GGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 344678999999999999999999999875
No 79
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.5e-43 Score=366.49 Aligned_cols=274 Identities=22% Similarity=0.365 Sum_probs=218.4
Q ss_pred ccCHHHHHHHhcCCccccccccCCcceEEEEEE------cCCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCcee
Q 005859 391 MFNLEEVERATQCFSEANLLGKSSFSATYKGIL------RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLAS 463 (673)
Q Consensus 391 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~ 463 (673)
.+...++....++|...+.||+|+||+||+|+. .+++.||||++.........+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 345566666778999999999999999999984 246899999997654333456799999999999 7999999
Q ss_pred EeeEEecCCCCeEEEEEeecCCCChhhhhccccCC------------ccccCHHHHHHHHHHHHHHHHHHhcCCCCcccC
Q 005859 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHP 531 (673)
Q Consensus 464 l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHr 531 (673)
+++++... ....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. ||+||
T Consensus 96 ~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--~i~H~ 172 (316)
T 2xir_A 96 LLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHR 172 (316)
T ss_dssp EEEEECCT-TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT--TCCCS
T ss_pred EEEEEecC-CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC--Ccccc
Confidence 99998643 34589999999999999999754321 12389999999999999999999998 89999
Q ss_pred CcCCCCeEecCCCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 005859 532 NLSAEKVLIHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSIT 609 (673)
Q Consensus 532 Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~ 609 (673)
||||+||+++.++.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999986644321 12223457788999999998899999999999999999999 999986
Q ss_pred hhhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 610 PFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
...........+..... ...+...+.++.+++.+||+.||++|||+.|+++.|+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 253 GVKIDEEFCRRLKEGTR----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp TCCCSHHHHHHHHHTCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHhccCcc----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 54221111111111111 12223345789999999999999999999999999999875
No 80
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=378.19 Aligned_cols=254 Identities=21% Similarity=0.288 Sum_probs=205.4
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
..++|...+.||+|+||+||+|... +|+.||+|++...... .+.+.+.+|++++++++|||||++++++.+ .+..+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE--EGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC--SSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE--CCEEE
Confidence 3567999999999999999999975 5899999999765432 234678999999999999999999999954 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec---CCCCeeecccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLH 554 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~---~~~~~kl~DfGla 554 (673)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++ +++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~--givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM--GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 99999999999999873 34589999999999999999999998 899999999999998 4678999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.................+ ......
T Consensus 161 ~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~ 237 (444)
T 3soa_A 161 IEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEW 237 (444)
T ss_dssp BCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTT
T ss_pred EEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCcccc
Confidence 87654322 223457999999999999989999999999999999999999999765433222221111111 111122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 238 DTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 344578999999999999999999999986
No 81
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.4e-42 Score=361.39 Aligned_cols=255 Identities=19% Similarity=0.274 Sum_probs=198.5
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCC-cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||+||+|+..+|+.||+|++....... ....+.+|++++++++||||+++++++.. .+..++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS--ERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC--SSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc--CCEEEEE
Confidence 36789999999999999999999889999999997653222 24678999999999999999999999954 4788999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||++ |+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 98 ~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFME-KDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH--RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCS-EEHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCC-CCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99997 5888888632 34589999999999999999999988 899999999999999999999999999987653
Q ss_pred cchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCc----------
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN---------- 628 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~---------- 628 (673)
... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..................+.
T Consensus 172 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 172 PVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred Ccc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence 321 2334568999999999876 5689999999999999999999999865432211111100000000
Q ss_pred -------C--CCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 629 -------L--EGK-----FSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 629 -------~--~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ... .....+.++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 000 01123467899999999999999999999986
No 82
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.9e-43 Score=395.35 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=203.4
Q ss_pred ccccCCcceEEEEEEc---CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEEeecCC
Q 005859 409 LLGKSSFSATYKGILR---DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485 (673)
Q Consensus 409 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~E~~~~ 485 (673)
.||+|+||.||+|.++ ++..||||+++........++|.+|+++|++++|||||++++++.. +..++||||+++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---~~~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---SSEEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---CCeEEEEEeCCC
Confidence 7999999999999875 4668999999876545567889999999999999999999999854 458999999999
Q ss_pred CChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCcchh--
Q 005859 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF-- 563 (673)
Q Consensus 486 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-- 563 (673)
|+|.+++... ...+++..+..++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+++........
T Consensus 420 g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~--~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 420 GPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK--NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp CBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred CcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC--CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 9999999632 34689999999999999999999998 7999999999999999999999999999876543211
Q ss_pred hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHHHH
Q 005859 564 SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLG 642 (673)
Q Consensus 564 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 642 (673)
......+++.|+|||++....++.++|||||||++|||+| |+.||.......... .+........+..++.++.
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~-----~i~~~~~~~~p~~~~~~l~ 569 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA-----FIEQGKRMECPPECPPELY 569 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHH-----HHHTTCCCCCCTTCCHHHH
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCcCCHHHH
Confidence 1222345688999999998899999999999999999998 999997643322111 1111122234445668899
Q ss_pred HHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 643 QIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 643 ~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
++|.+||+.||++||++.+|++.|+.++.
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999998754
No 83
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-43 Score=369.39 Aligned_cols=269 Identities=22% Similarity=0.346 Sum_probs=199.6
Q ss_pred HHHHHhcCCccccccccCCcceEEEEEEcC-Cc---EEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEec
Q 005859 396 EVERATQCFSEANLLGKSSFSATYKGILRD-GS---VVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCS 470 (673)
Q Consensus 396 ~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (673)
++....++|...+.||+|+||.||+|+... +. .||||++..... ....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 333445789999999999999999999664 32 799999976532 2345789999999999999999999999865
Q ss_pred CCCC----eEEEEEeecCCCChhhhhccccC--CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC
Q 005859 471 KGRG----ECFLIYDFVPNGNLLQHLDLEAG--SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544 (673)
Q Consensus 471 ~~~~----~~~lv~E~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~ 544 (673)
.... ..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. ||+||||||+|||+++++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR--NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECTTS
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC--CcccCCCCcceEEEcCCC
Confidence 4221 23899999999999999964332 123589999999999999999999998 899999999999999999
Q ss_pred CeeeccccccccccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchh
Q 005859 545 NPLLSDSGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVE 622 (673)
Q Consensus 545 ~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~ 622 (673)
.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||+| |+.||.............
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~- 253 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI- 253 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh-
Confidence 9999999999876543221 2223456778999999999899999999999999999999 899987643322211111
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 623 DFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
. ......+...+.++.+++.+||+.||++|||+.++++.|+++++
T Consensus 254 ---~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 254 ---G-GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp ---T-TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---c-CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1 11112233455789999999999999999999999999999976
No 84
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-42 Score=364.10 Aligned_cols=264 Identities=19% Similarity=0.350 Sum_probs=204.9
Q ss_pred HHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhcc--CCCCceeEeeEEecCCC--C
Q 005859 399 RATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL--KHENLASLRGICCSKGR--G 474 (673)
Q Consensus 399 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~~~--~ 474 (673)
...++|...+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++..... .
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 34568999999999999999999986 899999998643 344566666666665 99999999999876533 5
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC------CCCcccCCcCCCCeEecCCCCeee
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK------RPGLVHPNLSAEKVLIHRRYNPLL 548 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~ivHrDlk~~NILl~~~~~~kl 548 (673)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||+. ++||+||||||+|||++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 78999999999999999963 3589999999999999999999986 457999999999999999999999
Q ss_pred ccccccccccCcchh---hhhccCCCCCccCCccccCCCCCcc------hhHHHHHHHHHHHHhC----------CCCCC
Q 005859 549 SDSGLHKLLADDIVF---SMLKASAAMGYLAPEYTTTGRFTEK------SDIYAFGMIVFQILSG----------KCSIT 609 (673)
Q Consensus 549 ~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~k------sDVwSfGvvl~el~tG----------~~p~~ 609 (673)
+|||+++........ ......||+.|+|||++.+..++.+ +|||||||++|||+|| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 999999766543221 1124568999999999987766654 9999999999999999 55654
Q ss_pred hhhHhhhhccchhhh-cCCcCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 610 PFTRQAAESSKVEDF-IDPNLEGKFS-----VSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 610 ~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
............... .........+ ..++.++.+++.+||+.||++|||+.||++.|+++.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 332111111111111 1111222222 36778899999999999999999999999999999765
No 85
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.9e-43 Score=361.85 Aligned_cols=253 Identities=20% Similarity=0.377 Sum_probs=199.1
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEEe
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~E 481 (673)
++|+..+.||+|+||+||+|+.. ++.||||++... ...+.|.+|++++++++||||+++++++. +..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL----NPVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT----TTTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc----CCcEEEEE
Confidence 56888899999999999999985 788999998643 34578999999999999999999999884 34789999
Q ss_pred ecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCC-CCcccCCcCCCCeEecCCCC-eeeccccccccccC
Q 005859 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHRRYN-PLLSDSGLHKLLAD 559 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-~~ivHrDlk~~NILl~~~~~-~kl~DfGla~~~~~ 559 (673)
|+++|+|.+++.... ....+++..++.++.|+++||+|||+.. .||+||||||+||+++.++. +||+|||+++....
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 80 YAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred cCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999999997432 2245789999999999999999999832 28999999999999998886 79999999976543
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh-ccchhhhcCCcCCCCCCHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE-SSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 638 (673)
. .....|+..|+|||++.+..++.++||||||+++|||+||+.||......... ......... .......+
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 230 (307)
T 2eva_A 159 H----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR----PPLIKNLP 230 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC----CCCBTTCC
T ss_pred c----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC----CCcccccC
Confidence 2 22346899999999999989999999999999999999999998653211100 001111111 12223445
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 788999999999999999999999999998864
No 86
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.8e-43 Score=369.36 Aligned_cols=264 Identities=21% Similarity=0.364 Sum_probs=214.1
Q ss_pred cCCccccccccCCcceEEEEEE-----cCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGIL-----RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
++|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++...+.+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5788899999999999999984 358899999997653 3344679999999999999999999999987666789
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR--RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCChhhEEECCCCCEEEccccccee
Confidence 9999999999999999743 23589999999999999999999987 899999999999999999999999999987
Q ss_pred ccCcch--hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhc----------cchhhh
Q 005859 557 LADDIV--FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES----------SKVEDF 624 (673)
Q Consensus 557 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~----------~~~~~~ 624 (673)
...... .......++..|+|||++.+..++.++||||||+++|||+||+.||.......... ....+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 654321 12233457888999999998889999999999999999999999876543221100 111122
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.........+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 22222233445566889999999999999999999999999998865
No 87
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.9e-43 Score=370.01 Aligned_cols=254 Identities=18% Similarity=0.283 Sum_probs=204.5
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccC----CCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTS----CKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
.+.|...+.||+|+||+||+|+.. +|+.||||++.... .....+.+.+|++++++++||||+++++++... +.
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~ 100 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD--GM 100 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--CE
Confidence 356899999999999999999976 48999999986432 122457899999999999999999999999654 78
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC---eeecccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN---PLLSDSG 552 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~---~kl~DfG 552 (673)
.++||||+++|+|.+++.........+++..+..++.||+.||+|||++ ||+||||||+|||++.++. +||+|||
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN--NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999999999988864433334689999999999999999999998 8999999999999987654 9999999
Q ss_pred ccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCC-
Q 005859 553 LHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG- 631 (673)
Q Consensus 553 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~- 631 (673)
+++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||....... ...+.......
T Consensus 179 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~i~~~~~~~~ 252 (351)
T 3c0i_A 179 VAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL-----FEGIIKGKYKMN 252 (351)
T ss_dssp TCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHH-----HHHHHHTCCCCC
T ss_pred ceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHH-----HHHHHcCCCCCC
Confidence 9987654322 2234578999999999999899999999999999999999999997643211 11111111100
Q ss_pred -CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 632 -KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 632 -~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 001123578899999999999999999999985
No 88
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.9e-43 Score=367.55 Aligned_cols=262 Identities=20% Similarity=0.384 Sum_probs=211.0
Q ss_pred hcCCccccccccCCcceEEEEEEc--------CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR--------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSK 471 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 471 (673)
.++|...+.||+|+||.||+|+.. ++..||||++.........+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-
Confidence 467889999999999999999863 46789999997654334456789999999999 89999999999954
Q ss_pred CCCeEEEEEeecCCCChhhhhccccC------------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeE
Q 005859 472 GRGECFLIYDFVPNGNLLQHLDLEAG------------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL 539 (673)
Q Consensus 472 ~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NIL 539 (673)
.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+. ||+||||||+||+
T Consensus 113 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 -DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--KCIHRDLAARNVL 189 (334)
T ss_dssp -SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEE
T ss_pred -CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCccceEE
Confidence 4678999999999999999975421 123489999999999999999999998 8999999999999
Q ss_pred ecCCCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhh
Q 005859 540 IHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAE 617 (673)
Q Consensus 540 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~ 617 (673)
++.++.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||+| |+.||.........
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 99999999999999987654322 12233456788999999988889999999999999999999 99998654332211
Q ss_pred ccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 618 SSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
. .+.... ....+...+.++.+++.+||+.||++|||+.|+++.|++++.
T Consensus 270 ~-~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 270 K-LLKEGH----RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp H-HHHHTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-HHhcCC----CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 111111 112233455789999999999999999999999999999875
No 89
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.3e-42 Score=362.63 Aligned_cols=258 Identities=19% Similarity=0.338 Sum_probs=190.2
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|+..+.||+|+||.||+|+.. +|+.||||++.........+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT--ENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC--TTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE--CCeEEEE
Confidence 457888999999999999999976 4899999999766544455789999999999999999999999854 4789999
Q ss_pred EeecCCCChhhhhccccC--CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAG--SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
|||++ |+|.+++..... ....+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN--KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 99997 699999864321 124589999999999999999999987 8999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh------------
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF------------ 624 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~------------ 624 (673)
..... ......+|+.|+|||++.+. .++.++|||||||++|||+||+.||................
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 53221 22345689999999999764 58999999999999999999999996543321111100000
Q ss_pred ----cCCcCCC------------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 625 ----IDPNLEG------------KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 625 ----~~~~~~~------------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.... ......+.++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000000 011123468999999999999999999999975
No 90
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=372.48 Aligned_cols=249 Identities=20% Similarity=0.293 Sum_probs=201.0
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|+..+.||+|+||+||+|+.+. |+.||||++.+... ....+.+.+|.++++.+ +||||+++++++.. .+..
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~--~~~~ 99 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT--PDRL 99 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe--CCEE
Confidence 4689999999999999999999764 89999999976421 23446788999999998 79999999999954 4789
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK--GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 999999999999999973 24589999999999999999999998 899999999999999999999999999986
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. .. ..++..
T Consensus 174 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~----~~--~~~p~~ 246 (353)
T 3txo_A 174 GICNGV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN----DE--VVYPTW 246 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----CC--CCCCTT
T ss_pred cccCCc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc----CC--CCCCCC
Confidence 433221 23345799999999999988899999999999999999999999976543322222211 11 122333
Q ss_pred HHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 005859 637 EASNLGQIALHCTHESPSHRPSI------ENVMQ 664 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~------~evl~ 664 (673)
.+..+.+++.+||+.||++||++ .|+++
T Consensus 247 ~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 247 LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 55778999999999999999998 66654
No 91
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.6e-42 Score=356.82 Aligned_cols=254 Identities=20% Similarity=0.318 Sum_probs=198.6
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+..+|+.||||++..... ....+.+.+|++++++++||||+++++++... +..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--KRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS--SCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC--CeEEEEE
Confidence 46888999999999999999998899999999976532 22346789999999999999999999999654 6789999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++ +|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR--RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99975 999988642 24589999999999999999999998 8999999999999999999999999999876432
Q ss_pred chhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh---------------
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF--------------- 624 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~--------------- 624 (673)
.. ......+|+.|+|||++.+. .++.++|||||||++|||+||+.||................
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence 21 22345689999999999764 58999999999999999999999997543221111110000
Q ss_pred -cCCcCC-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 625 -IDPNLE-------GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 625 -~~~~~~-------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.++... .......+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 0111234578899999999999999999999985
No 92
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.8e-42 Score=357.19 Aligned_cols=254 Identities=17% Similarity=0.274 Sum_probs=199.1
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC-cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
++|+..+.||+|+||+||+|+.. +++.||||++....... ....+.+|++++++++||||+++++++... +..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--KKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC--CEEEEE
Confidence 47889999999999999999976 48999999997654322 246789999999999999999999999654 789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++ ++.+++... ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~--~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR--NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999975 666666432 34699999999999999999999998 899999999999999999999999999987653
Q ss_pred cchhhhhccCCCCCccCCccccCCC-CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCC-----------
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP----------- 627 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~----------- 627 (673)
... ......+|..|+|||++.+.. ++.++|||||||++|||+||..|+............+.+....
T Consensus 154 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 154 PVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 321 233456899999999998766 8999999999999999999988864322111110000000000
Q ss_pred -------------cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 628 -------------NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 628 -------------~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..........+.++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000112234578899999999999999999999986
No 93
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=364.88 Aligned_cols=258 Identities=22% Similarity=0.459 Sum_probs=203.3
Q ss_pred cCCccccccccCCcceEEEEEEcC-----CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.+|...+.||+|+||.||+|+... +..||||.+...........+.+|++++++++||||+++++++.. .+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK--YKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec--CCCc
Confidence 467778999999999999998653 236999999765433345679999999999999999999999854 4778
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||++++++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM--NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 9999999999999999742 24689999999999999999999998 899999999999999999999999999987
Q ss_pred ccCcchh--hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 557 LADDIVF--SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 557 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... ......++..|+|||.+.+..++.++|||||||++|||+| |+.||........... +.. ......
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~-~~~----~~~~~~ 271 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA-IND----GFRLPT 271 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-HHT----TCCCCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHH-HHC----CCcCCC
Confidence 6543211 1223345778999999998899999999999999999999 9999865433222111 111 111122
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+...+..+.+++.+||+.||++||++.++++.|++++.
T Consensus 272 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 33456789999999999999999999999999999875
No 94
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-42 Score=361.67 Aligned_cols=245 Identities=19% Similarity=0.301 Sum_probs=204.9
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||+||+|+.. +|+.||+|++.+... ....+.+.+|+.+++.++||||+++++++.+ .+..++
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~l 83 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD--AQQIFM 83 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC--SSEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe--CCEEEE
Confidence 57889999999999999999976 589999999976421 2345678899999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK--DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 9999999999999973 24589999999999999999999987 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. ... .++...+
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~----~~~--~~p~~~~ 227 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN----AEL--RFPPFFN 227 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH----CCC--CCCTTSC
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh----CCC--CCCCCCC
Confidence 43 2245789999999999999999999999999999999999999976433322221111 111 2233445
Q ss_pred HHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRP-----SIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RP-----s~~evl~ 664 (673)
.++.+++.+||+.||++|| +++|+++
T Consensus 228 ~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 7899999999999999999 8888874
No 95
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.1e-43 Score=380.10 Aligned_cols=260 Identities=12% Similarity=0.209 Sum_probs=210.4
Q ss_pred HHHHHHHhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEec
Q 005859 394 LEEVERATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCS 470 (673)
Q Consensus 394 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (673)
+.++....++|...+.||+|+||+||+|+.+. ++.||+|++.+... ....+.+.+|+++++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 45566667899999999999999999999875 88999999975321 2233568899999999999999999999954
Q ss_pred CCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecc
Q 005859 471 KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSD 550 (673)
Q Consensus 471 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~D 550 (673)
.+..|+||||+++|+|.+++.. ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|
T Consensus 141 --~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~--givHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 141 --DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp --SSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEECC
T ss_pred --CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC--CeEeccCCHHHeeECCCCCEEEec
Confidence 4789999999999999999863 2488999999999999999999998 899999999999999999999999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCccccCCC----CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcC
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR----FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~ 626 (673)
||+++.............+||+.|+|||++.+.. ++.++|||||||++|||+||+.||..................
T Consensus 212 FG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 291 (410)
T 3v8s_A 212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS 291 (410)
T ss_dssp CTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred cceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc
Confidence 9999877654333334567999999999998655 889999999999999999999999765433222222211111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSH--RPSIENVMQ 664 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~ 664 (673)
.... .....+.++.+++.+||+.+|.+ ||+++||++
T Consensus 292 ~~~p--~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 292 LTFP--DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CCCC--TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ccCC--CcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 1111 11234578899999999999988 999999975
No 96
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.4e-43 Score=375.53 Aligned_cols=263 Identities=14% Similarity=0.176 Sum_probs=204.7
Q ss_pred HhcCCccccccccCCcceEEEEEEcC------CcEEEEEEecccCCCC----------cHHHHHHHHHHHhccCCCCcee
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSCKS----------DEGEFLKGLKILTSLKHENLAS 463 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~ 463 (673)
..++|.+.+.||+|+||.||+|.+.. ++.||||++....... ....+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34679999999999999999999765 4789999986543100 1123445666778889999999
Q ss_pred EeeEEecCCC--CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec
Q 005859 464 LRGICCSKGR--GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541 (673)
Q Consensus 464 l~~~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~ 541 (673)
+++++..... ...++||||+ +++|.+++... ...+++..++.|+.||+.||+|||+. ||+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~--~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH--EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEEecCCHHHEEEe
Confidence 9999866422 4589999999 99999999742 24699999999999999999999998 899999999999999
Q ss_pred --CCCCeeeccccccccccCcchh------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhH
Q 005859 542 --RRYNPLLSDSGLHKLLADDIVF------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR 613 (673)
Q Consensus 542 --~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~ 613 (673)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876543211 11234589999999999998999999999999999999999999975321
Q ss_pred hhhh--------ccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 614 QAAE--------SSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 614 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.... ...+....++.+. ....+.++.+++..||+.||++||++.+|++.|++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 267 DPKYVRDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 1111 0112222222211 12235789999999999999999999999999998875
No 97
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-43 Score=359.21 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=209.6
Q ss_pred cCCcccc-ccccCCcceEEEEEEc---CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 402 QCFSEAN-LLGKSSFSATYKGILR---DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 402 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
++|.+.+ .||+|+||.||+|.+. ++..||||++.........+.+.+|++++++++||||+++++++.. +..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC---CCcE
Confidence 4555555 8999999999999864 4788999999875434445789999999999999999999999832 4589
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 86 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK--NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC--CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 999999999999999632 34589999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcch--hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 558 ADDIV--FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 558 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||.......... .+.. ......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~i~~----~~~~~~~ 235 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA-FIEQ----GKRMECP 235 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH-HHHT----TCCCCCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-HHhc----CCcCCCC
Confidence 54321 11223346788999999988889999999999999999999 999986543322111 1111 1112234
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
...+.++.+++.+||+.||++||++.++++.|++++.+
T Consensus 236 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 45567899999999999999999999999999998753
No 98
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2e-42 Score=357.75 Aligned_cols=261 Identities=22% Similarity=0.374 Sum_probs=205.7
Q ss_pred hcCCccccccccCCcceEEEEEEcC----CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
..+|...+.||+|+||.||+|+..+ ...||+|.+.........+.+.+|++++++++||||+++++++... .+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 102 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSP 102 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-SSCC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-CCce
Confidence 3468888999999999999999653 2368999987654334456799999999999999999999997543 4567
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||++++++.+||+|||+++.
T Consensus 103 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~--~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK--KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCchheEEECCCCCEEECccccccc
Confidence 8999999999999999632 34589999999999999999999988 899999999999999999999999999987
Q ss_pred ccCcchh---hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCC-CCChhhHhhhhccchhhhcCCcCCCC
Q 005859 557 LADDIVF---SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKC-SITPFTRQAAESSKVEDFIDPNLEGK 632 (673)
Q Consensus 557 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~-p~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
....... ......+++.|+|||.+.+..++.++||||||+++|||+||.. ||......... ...... ....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~-~~~~~~----~~~~ 252 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQG----RRLL 252 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH-HHHHTT----CCCC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH-HHHhcC----CCCC
Confidence 6543321 2233456788999999998899999999999999999999554 44332211111 111111 1112
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 633 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
.+...+..+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 253 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 253 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2333457899999999999999999999999999998763
No 99
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.9e-43 Score=366.87 Aligned_cols=258 Identities=14% Similarity=0.158 Sum_probs=205.8
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~lv 479 (673)
++|...+.||+|+||+||+|+.. +|+.||||++.... ..+.+.+|+++++++ +||||+++++++... +..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--~~~~lv 83 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCG--KYNAMV 83 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEEET--TEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEecC--CccEEE
Confidence 57889999999999999999964 58999999987543 234688999999999 999999999998654 788999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC-----eeecccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN-----PLLSDSGLH 554 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~-----~kl~DfGla 554 (673)
|||+ +++|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+|||++.++. +||+|||++
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~--~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK--NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC--CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 9999 99999999743 34699999999999999999999998 8999999999999999887 999999999
Q ss_pred ccccCcchh------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh--ccchhhhcC
Q 005859 555 KLLADDIVF------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE--SSKVEDFID 626 (673)
Q Consensus 555 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~--~~~~~~~~~ 626 (673)
+........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||......... ...+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~ 237 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR 237 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc
Confidence 876543211 123457899999999999999999999999999999999999999753211100 001100000
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+..........+ ++.+++..||+.||.+||++++|++.|++++.
T Consensus 238 ~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 000000011123 89999999999999999999999999998864
No 100
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.9e-43 Score=372.80 Aligned_cols=248 Identities=17% Similarity=0.273 Sum_probs=199.2
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCC--CcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCK--SDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|+..+.||+|+||+||+|+.+. ++.||||++++.... ...+.+.+|..++.++ +|||||++++++.. .+..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~--~~~~ 128 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRL 128 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC--SSEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE--CCEE
Confidence 4579999999999999999999775 889999999865422 2235688999999887 89999999999854 4789
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++.
T Consensus 129 ~lV~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~--givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 999999999999999973 24699999999999999999999998 899999999999999999999999999986
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh-----hccchhhhcCCcCCC
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA-----ESSKVEDFIDPNLEG 631 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~-----~~~~~~~~~~~~~~~ 631 (673)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+.... .
T Consensus 203 ~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--~ 279 (396)
T 4dc2_A 203 GLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--I 279 (396)
T ss_dssp CCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC--C
T ss_pred cccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc--c
Confidence 33221 123446799999999999999999999999999999999999999953211100 000111111111 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCH
Q 005859 632 KFSVSEASNLGQIALHCTHESPSHRPSI 659 (673)
Q Consensus 632 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~ 659 (673)
.++...+.++.+++.+||+.||++||++
T Consensus 280 ~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 2334456789999999999999999996
No 101
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.5e-43 Score=365.25 Aligned_cols=258 Identities=22% Similarity=0.377 Sum_probs=203.6
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcE----EEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSV----VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
.++|+..+.||+|+||+||+|+... ++. ||+|.+.........+.+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS---S
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC---C
Confidence 3578899999999999999999653 443 5778776655455678899999999999999999999999653 4
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.++|+||+++|+|.+++... ...+++..++.++.|++.||+|||++ ||+||||||+|||++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC--CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 78999999999999999743 24589999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 556 LLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 556 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... .......+++.|+|||.+.+..++.++|||||||++|||+| |+.||......... ..+........
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-----~~~~~~~~~~~ 240 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----SILEKGERLPQ 240 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTTCCCCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-----HHHHcCCCCCC
Confidence 7654321 12233456778999999999999999999999999999999 99998764332211 11111112223
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 241 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 241 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 34456789999999999999999999999999999864
No 102
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.9e-43 Score=361.38 Aligned_cols=253 Identities=23% Similarity=0.416 Sum_probs=201.8
Q ss_pred hcCCccccccccCCcceEEEEEEcC-C-------cEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-G-------SVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG 472 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 472 (673)
.++|...+.||+|+||+||+|+... + ..||+|++.... ....+.+.+|++++++++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVC-- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC--
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe--
Confidence 3578889999999999999998654 3 479999987643 3455789999999999999999999999954
Q ss_pred CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC-------
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN------- 545 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~------- 545 (673)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN--TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC--CeECCCcCcceEEEecCCcccccccc
Confidence 46789999999999999999742 23489999999999999999999998 7999999999999998887
Q ss_pred -eeeccccccccccCcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhh
Q 005859 546 -PLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED 623 (673)
Q Consensus 546 -~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~ 623 (673)
+||+|||+++...... ...++..|+|||++.+ ..++.++|||||||++|||+||..|+...............
T Consensus 159 ~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~ 233 (289)
T 4fvq_A 159 FIKLSDPGISITVLPKD-----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233 (289)
T ss_dssp EEEECCCCSCTTTSCHH-----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT
T ss_pred eeeeccCcccccccCcc-----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc
Confidence 9999999997654322 2346888999999987 66999999999999999999965544332111111111111
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 624 FIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
... .+...+.++.+++.+||+.||++|||+.|+++.|++++.+
T Consensus 234 --~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 234 --RHQ----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp --TCC----CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred --cCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 111 1122245688999999999999999999999999999865
No 103
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.4e-43 Score=366.13 Aligned_cols=246 Identities=16% Similarity=0.251 Sum_probs=202.2
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||+||+|+.. +++.||||++..... ......+.+|+++++.++||||+++++++.. .+..++
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~l 86 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT--PTDIVM 86 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEEE
Confidence 57899999999999999999974 589999999875421 2234578999999999999999999999965 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+ +|+|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+|||+++++.+||+|||+++...
T Consensus 87 v~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~--givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH--KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 7899998863 24589999999999999999999997 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... ..+.. .....+...
T Consensus 160 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----~~i~~--~~~~~p~~~ 231 (336)
T 3h4j_B 160 DGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----KKVNS--CVYVMPDFL 231 (336)
T ss_dssp TSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----CCCCS--SCCCCCTTS
T ss_pred CCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----HHHHc--CCCCCcccC
Confidence 5432 234578999999999988776 78999999999999999999999653221111 11111 011233445
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||.+|||++|+++
T Consensus 232 s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 232 SPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 678899999999999999999999975
No 104
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=366.62 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=189.4
Q ss_pred HhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
..++|...+.||+|+||.||+|+... ++.||||++.... ..+.+.+|++++++++||||+++++++.. .+..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFET--PTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEec--CCeEEE
Confidence 35679999999999999999999874 8899999997643 34578899999999999999999999955 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC---CCCeeeccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR---RYNPLLSDSGLHK 555 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~---~~~~kl~DfGla~ 555 (673)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+|||++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN--GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 9999999999999863 34589999999999999999999998 8999999999999975 8899999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||............+... ..........
T Consensus 200 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~ 276 (349)
T 2w4o_A 200 IVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-EYYFISPWWD 276 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-CCCCCTTTTT
T ss_pred ccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-CCccCCchhh
Confidence 765432 1234568999999999999899999999999999999999999986543221111111111 0111112223
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.++.+++.+||+.||++|||+.|+++
T Consensus 277 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 45678999999999999999999999986
No 105
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-42 Score=354.87 Aligned_cols=253 Identities=21% Similarity=0.308 Sum_probs=200.1
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+.. ++..||+|++.........+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED--YHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec--CCeEEEEE
Confidence 46888999999999999999976 4889999999876545566889999999999999999999999954 47899999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe---cCCCCeeeccccccccc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl---~~~~~~kl~DfGla~~~ 557 (673)
||+++|+|.+++.........+++..+..++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||+++..
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ--HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC--CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999999864432335699999999999999999999987 89999999999999 45678999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... ......++..|+|||.+. +.++.++||||||+++|||++|+.||.............. ..+..... ....
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~~~~~~~-~~~~ 251 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY--KEPNYAVE-CRPL 251 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCC---CCC
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc--CCcccccc-cCcC
Confidence 5432 223456899999999885 5689999999999999999999999976433222111111 11111110 1113
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 252 TPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 467889999999999999999999985
No 106
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-42 Score=359.60 Aligned_cols=259 Identities=15% Similarity=0.176 Sum_probs=207.3
Q ss_pred hcCCccccccccCCcceEEEEEE-cCCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|...+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++++ +|+||+++++++.. ....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE--GLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE--TTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCC--CceeEE
Confidence 35788999999999999999996 458999999986543 334688999999999 89999999999854 478899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC-----eeeccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN-----PLLSDSGL 553 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~-----~kl~DfGl 553 (673)
||||+ +++|.+++... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK--SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 99999999743 24589999999999999999999987 8999999999999988776 99999999
Q ss_pred cccccCcchh------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHh---hhhccchhhh
Q 005859 554 HKLLADDIVF------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQ---AAESSKVEDF 624 (673)
Q Consensus 554 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~---~~~~~~~~~~ 624 (673)
++........ ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 237 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence 9876543221 123456899999999999989999999999999999999999999763211 0000000000
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.... ........+.++.+++.+||+.||++||++++|++.|++++.
T Consensus 238 ~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 238 QSTP-LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHSC-HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred cCcc-HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 0000 001112345789999999999999999999999999999875
No 107
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-43 Score=379.79 Aligned_cols=265 Identities=18% Similarity=0.239 Sum_probs=210.6
Q ss_pred ccCHHHHHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeE
Q 005859 391 MFNLEEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGI 467 (673)
Q Consensus 391 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~ 467 (673)
.+.++++....++|+..+.||+|+||+||+|+.+ +|+.||||++.+... ....+.+.+|.+++.+++||||++++++
T Consensus 50 ~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~ 129 (412)
T 2vd5_A 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA 129 (412)
T ss_dssp HHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 3456677777899999999999999999999986 599999999975321 1223458899999999999999999999
Q ss_pred EecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCee
Q 005859 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPL 547 (673)
Q Consensus 468 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~k 547 (673)
+.+ .+..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+|
T Consensus 130 ~~~--~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~--giiHrDLKp~NILld~~g~vk 202 (412)
T 2vd5_A 130 FQD--ENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL--GYVHRDIKPDNILLDRCGHIR 202 (412)
T ss_dssp EEC--SSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEE
T ss_pred Eee--CCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CeeecccCHHHeeecCCCCEE
Confidence 954 47899999999999999999742 23689999999999999999999987 899999999999999999999
Q ss_pred eccccccccccCcchhhhhccCCCCCccCCcccc-------CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccc
Q 005859 548 LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTT-------TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSK 620 (673)
Q Consensus 548 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~ 620 (673)
|+|||+++.............+||+.|+|||++. ...|+.++|||||||++|||+||+.||............
T Consensus 203 L~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i 282 (412)
T 2vd5_A 203 LADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282 (412)
T ss_dssp ECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred EeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9999999877654332333457999999999987 356899999999999999999999999765433222222
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHH
Q 005859 621 VEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHR---PSIENVMQ 664 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~R---Ps~~evl~ 664 (673)
......... .......+.++.+++.+||. +|++| |+++|+++
T Consensus 283 ~~~~~~~~~-p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 283 VHYKEHLSL-PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HTHHHHCCC-C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HhcccCcCC-CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 211100111 11123345789999999999 99998 58988864
No 108
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4e-43 Score=367.20 Aligned_cols=268 Identities=19% Similarity=0.339 Sum_probs=215.1
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEE
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 468 (673)
++++...++|...+.||+|+||.||+|+.. +++.||||.+...........+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 444556778999999999999999999865 36789999997654333456799999999999999999999999
Q ss_pred ecCCCCeEEEEEeecCCCChhhhhccccC------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC
Q 005859 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAG------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR 542 (673)
Q Consensus 469 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~ 542 (673)
.. .+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ ||+||||||+||+++.
T Consensus 98 ~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 98 SQ--GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAE 173 (322)
T ss_dssp CS--SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT--TCBCSCCSGGGEEECT
T ss_pred cc--CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC--CCccCCCccceEEEcC
Confidence 54 4678999999999999999974321 113578999999999999999999998 8999999999999999
Q ss_pred CCCeeeccccccccccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccc
Q 005859 543 RYNPLLSDSGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSK 620 (673)
Q Consensus 543 ~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~ 620 (673)
++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||............
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 253 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence 999999999999866443221 2223456788999999998889999999999999999999 88888664332221111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 621 VEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
. .... ...+...+..+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 254 ~----~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 M----EGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp H----TTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred H----cCCc-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 1111 12233455789999999999999999999999999998765
No 109
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6.6e-43 Score=368.30 Aligned_cols=251 Identities=17% Similarity=0.306 Sum_probs=204.3
Q ss_pred HHHhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCC
Q 005859 398 ERATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSL-KHENLASLRGICCSKGR 473 (673)
Q Consensus 398 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 473 (673)
....++|...+.||+|+||+||+|+.+. |+.||||++.+... ....+.+..|.+++..+ +||||+++++++.+ .
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~--~ 90 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT--K 90 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC--S
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe--C
Confidence 3456789999999999999999999864 89999999976421 23456788999999987 99999999999954 4
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 91 ~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~g~vkL~DFG~ 164 (345)
T 1xjd_A 91 ENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGM 164 (345)
T ss_dssp SEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEeCCCChhhEEECCCCCEEEeEChh
Confidence 789999999999999999973 24589999999999999999999998 899999999999999999999999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||............... .+ .+
T Consensus 165 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~----~~ 237 (345)
T 1xjd_A 165 CKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NP----FY 237 (345)
T ss_dssp CBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC----CC
T ss_pred hhhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CC----CC
Confidence 986432211 233467999999999999999999999999999999999999999764333222111111 11 22
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIE-NVM 663 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~-evl 663 (673)
+...+.++.+++.+||+.||++||++. +++
T Consensus 238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 333557899999999999999999987 554
No 110
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-42 Score=369.57 Aligned_cols=252 Identities=18% Similarity=0.291 Sum_probs=205.3
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... ..+...+.+|+++|++++||||+++++++.. .+..++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~--~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFED--KYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC--SSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe--CCEEEEE
Confidence 357999999999999999999976 48999999987543 2344678999999999999999999999955 4789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC--CCCeeeccccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR--RYNPLLSDSGLHKLL 557 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~--~~~~kl~DfGla~~~ 557 (673)
|||+++|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+|||++. ++.+||+|||+++..
T Consensus 127 ~E~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH--SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC--CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 9999999999998632 23589999999999999999999998 8999999999999974 467999999999877
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||............... ............
T Consensus 202 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~ 277 (387)
T 1kob_A 202 NPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--DWEFDEDAFSSV 277 (387)
T ss_dssp CTTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC--CCCCCSSTTTTS
T ss_pred CCCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccccccC
Confidence 54322 23346899999999999989999999999999999999999999764332211111110 111111222344
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||++|||+.|+++
T Consensus 278 s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 278 SPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 578999999999999999999999986
No 111
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.3e-44 Score=368.73 Aligned_cols=258 Identities=19% Similarity=0.307 Sum_probs=190.7
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhc--cCCCCceeEeeEEecCCCC--eEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGICCSKGRG--ECF 477 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~~~--~~~ 477 (673)
++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++...... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 57899999999999999999875 889999998643 45678889999888 7999999999998765322 689
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHh--------cCCCCcccCCcCCCCeEecCCCCeeec
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH--------GKRPGLVHPNLSAEKVLIHRRYNPLLS 549 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~ivHrDlk~~NILl~~~~~~kl~ 549 (673)
+||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. ||+||||||+|||++.++.+||+
T Consensus 78 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~--~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP--AIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BC
T ss_pred EEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC--CEeeCcCCHHHeEECCCCCEEEe
Confidence 99999999999999963 35788889999999999999999 55 89999999999999999999999
Q ss_pred cccccccccCcchh---hhhccCCCCCccCCccccCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCh
Q 005859 550 DSGLHKLLADDIVF---SMLKASAAMGYLAPEYTTTG------RFTEKSDIYAFGMIVFQILSG----------KCSITP 610 (673)
Q Consensus 550 DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSfGvvl~el~tG----------~~p~~~ 610 (673)
|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 99999766543221 12234689999999999876 445789999999999999999 666644
Q ss_pred hhHhhhhcc-chhhhcCCcCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 611 FTRQAAESS-KVEDFIDPNLEGKFS-----VSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 611 ~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
......... ..............+ ...+..+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred cCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 322111111 111122222222222 2566789999999999999999999999999998865
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.2e-42 Score=365.46 Aligned_cols=245 Identities=18% Similarity=0.240 Sum_probs=204.9
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||.||+|+.. +|+.||||++.+... ....+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~l 118 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYM 118 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc--CCEEEE
Confidence 57889999999999999999976 589999999975421 2345678999999999999999999999854 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus 119 v~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC--CcccccCccceEEECCCCCEEEcccccceecc
Confidence 99999999999999732 4589999999999999999999987 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. .. ..++...+
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~----~~--~~~p~~~~ 262 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GK--VRFPSHFS 262 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----CC--CCCCTTCC
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc----CC--CCCCCCCC
Confidence 43 2245689999999999999999999999999999999999999976433222211111 11 12333456
Q ss_pred HHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPS-----IENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs-----~~evl~ 664 (673)
.++.+++.+||+.||++||+ ++|+++
T Consensus 263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 78999999999999999998 888764
No 113
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.3e-42 Score=361.81 Aligned_cols=272 Identities=22% Similarity=0.328 Sum_probs=205.4
Q ss_pred CHHHHHHHhcCCccccccccCCcceEEEEEEcC----CcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeE
Q 005859 393 NLEEVERATQCFSEANLLGKSSFSATYKGILRD----GSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGI 467 (673)
Q Consensus 393 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~ 467 (673)
.++++....++|...+.||+|+||.||+|+... ++.||||++...... ...+.+.+|++++++++||||++++++
T Consensus 25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 104 (313)
T 3brb_A 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV 104 (313)
T ss_dssp CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence 344555567789999999999999999998653 458999998765322 233678999999999999999999999
Q ss_pred EecCCCC---eEEEEEeecCCCChhhhhcccc--CCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC
Q 005859 468 CCSKGRG---ECFLIYDFVPNGNLLQHLDLEA--GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR 542 (673)
Q Consensus 468 ~~~~~~~---~~~lv~E~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~ 542 (673)
+...... ..++||||+++|+|.+++.... .....+++..++.++.|++.||+|||++ ||+||||||+||+++.
T Consensus 105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR--NFLHRDLAARNCMLRD 182 (313)
T ss_dssp EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT--TCCCCCCSGGGEEECT
T ss_pred EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCcceEEEcC
Confidence 8764332 4599999999999999985322 2335699999999999999999999987 8999999999999999
Q ss_pred CCCeeeccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccc
Q 005859 543 RYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSK 620 (673)
Q Consensus 543 ~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~ 620 (673)
++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||............
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 262 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL 262 (313)
T ss_dssp TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH
Confidence 99999999999987654322 12233456788999999999899999999999999999999 88888654332211111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 621 VEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.. ......+...+.++.+++.+||+.||++|||+.++++.|+++++
T Consensus 263 -~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 263 -LH----GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp -HT----TCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -Hc----CCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 11122334455789999999999999999999999999999875
No 114
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-42 Score=362.63 Aligned_cols=260 Identities=22% Similarity=0.422 Sum_probs=206.9
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcE--EEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~ 477 (673)
++|...+.||+|+||.||+|+.. ++.. ||||.+.........+.+.+|+++++++ +||||+++++++... +..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET--TEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC--CceE
Confidence 57888999999999999999965 4654 4999987654444556899999999999 999999999999654 7899
Q ss_pred EEEeecCCCChhhhhcccc------------CCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC
Q 005859 478 LIYDFVPNGNLLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~ 545 (673)
+||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECGGGC
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCccceEEEcCCCe
Confidence 9999999999999997432 1234689999999999999999999987 8999999999999999999
Q ss_pred eeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhh
Q 005859 546 PLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDF 624 (673)
Q Consensus 546 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~ 624 (673)
+||+|||+++...... ......++..|+|||.+.+..++.++||||||+++|||+| |+.||........... +..
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~-~~~- 256 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LPQ- 256 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-GGG-
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHH-hhc-
Confidence 9999999987543221 2223456788999999988889999999999999999998 9999876433222111 111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
......+...+.++.+++.+||+.||++|||+.|+++.|+++++.
T Consensus 257 ---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 257 ---GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp ---TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ---CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111223334567899999999999999999999999999998763
No 115
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-42 Score=358.36 Aligned_cols=260 Identities=14% Similarity=0.231 Sum_probs=201.0
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC--cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS--DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
-++|...+.||+|+||.||+|+.. +++.||||++....... ..+.+.+|++++++++||||+++++++... +..+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~--~~~~ 110 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID--GQLY 110 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC--CeEE
Confidence 468999999999999999999976 58899999997653222 236789999999999999999999999654 7899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 111 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAA--GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC--cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 999999999999999732 4589999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
............++..|+|||.+.+..++.++||||||+++|||+||+.||.......... .+.... ......+...
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~--~~~~~~~~~~ 261 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGA-HINQAI--PRPSTVRPGI 261 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHH-HHHSCC--CCGGGTSTTC
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHH-HhccCC--CCccccCCCC
Confidence 5543333344568999999999999899999999999999999999999997644321111 111110 0011223344
Q ss_pred HHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhc
Q 005859 638 ASNLGQIALHCTHESPSHRP-SIENVMQELSSIIG 671 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RP-s~~evl~~L~~i~~ 671 (673)
+.++.+++.+||+.||++|| +++++++.|++++.
T Consensus 262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 56899999999999999999 99999999998765
No 116
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-42 Score=354.86 Aligned_cols=259 Identities=22% Similarity=0.347 Sum_probs=205.7
Q ss_pred CCccccccccCCcceEEEEEEcC----CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 403 CFSEANLLGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.|...+.||+|+||+||+|++.+ +..||+|.+.........+.+.+|++++++++||||+++++++... ....++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP-EGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-SSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC-CCCcEE
Confidence 45667899999999999998643 2379999997654334457899999999999999999999998654 234589
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+. ||+||||||+||++++++.+||+|||+++...
T Consensus 101 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ--KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999974 235689999999999999999999998 89999999999999999999999999998665
Q ss_pred Ccchh---hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 559 DDIVF---SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 559 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
..... ......++..|+|||.+.+..++.++||||||+++|||+||..|+............+.. ......+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 251 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ----GRRLPQPE 251 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT----TCCCCCCT
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc----CCCCCCCc
Confidence 43211 122345778899999999999999999999999999999966665432221111111111 11122233
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+..+.+++.+||+.||++|||++++++.|++++.
T Consensus 252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 445789999999999999999999999999999875
No 117
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1e-42 Score=356.35 Aligned_cols=259 Identities=17% Similarity=0.308 Sum_probs=208.6
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|++++++++||||+++++++.....+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357889999999999999999976 5899999999765422 23467899999999999999999999987655678999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCC-----cccCCcCCCCeEecCCCCeeeccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG-----LVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-----ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR--SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc--cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 9999999999999975433345599999999999999999999987 5 99999999999999999999999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
++....... ......++..|+|||.+.+..++.++||||||+++|||+||+.||........... +..... ...
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-i~~~~~----~~~ 236 (279)
T 2w5a_A 163 ARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-IREGKF----RRI 236 (279)
T ss_dssp HHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHTCC----CCC
T ss_pred heeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHH-Hhhccc----ccC
Confidence 987654322 12234688999999999988999999999999999999999999876543222111 111111 122
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~ 667 (673)
+...+.++.+++.+||+.||++|||+.|+++.+.
T Consensus 237 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 237 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 3345578999999999999999999999997643
No 118
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-42 Score=364.84 Aligned_cols=262 Identities=17% Similarity=0.254 Sum_probs=202.5
Q ss_pred HHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccC----CCCcHHHHHHHHHHHhccCCCCceeEeeEEecC
Q 005859 397 VERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTS----CKSDEGEFLKGLKILTSLKHENLASLRGICCSK 471 (673)
Q Consensus 397 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 471 (673)
+....++|...+.||+|+||+||+|+.. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 4455678999999999999999999975 48899999987542 12345789999999999999999999999955
Q ss_pred CCCeEEEEEeecCCCChhhhhccccC------------------------------------CccccCHHHHHHHHHHHH
Q 005859 472 GRGECFLIYDFVPNGNLLQHLDLEAG------------------------------------SEKVLEWATRISVIKGIA 515 (673)
Q Consensus 472 ~~~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~ia 515 (673)
.+..++||||+++|+|.+++..... ....+++..+..++.||+
T Consensus 100 -~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 100 -EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp -SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred -CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 4789999999999999999852110 022346778889999999
Q ss_pred HHHHHHhcCCCCcccCCcCCCCeEecCCC--CeeeccccccccccC---cchhhhhccCCCCCccCCccccC--CCCCcc
Q 005859 516 KGISYLHGKRPGLVHPNLSAEKVLIHRRY--NPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTTT--GRFTEK 588 (673)
Q Consensus 516 ~gL~yLH~~~~~ivHrDlk~~NILl~~~~--~~kl~DfGla~~~~~---~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k 588 (673)
.||+|||+. ||+||||||+||+++.++ .+||+|||+++.... ..........||+.|+|||.+.+ ..++.+
T Consensus 179 ~~l~~LH~~--~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 179 SALHYLHNQ--GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHHT--TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHHC--CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999998 799999999999998776 899999999986543 11122345678999999999875 678999
Q ss_pred hhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 589 SDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 589 sDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+|||||||++|||++|+.||................. ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL--CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccc--ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999999999999976543322222111111 1111112234578999999999999999999999986
No 119
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.6e-42 Score=360.88 Aligned_cols=249 Identities=19% Similarity=0.308 Sum_probs=194.3
Q ss_pred hcCCccccccccCCcceEEEEEE----cCCcEEEEEEecccCC---CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAKTSC---KSDEGEFLKGLKILTSLKHENLASLRGICCSKGR 473 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (673)
.++|+..+.||+|+||.||+++. .+|+.||+|++.+... ......+.+|++++++++||||+++++++.. .
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~ 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--G 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC--S
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc--C
Confidence 35789999999999999999997 4689999999976532 1234568899999999999999999999955 4
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~--~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK--GIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred CEEEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC--CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 779999999999999999963 24588999999999999999999998 899999999999999999999999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............... . ...
T Consensus 168 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~----~--~~~ 240 (327)
T 3a62_A 168 CKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC----K--LNL 240 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT----C--CCC
T ss_pred ccccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----C--CCC
Confidence 976443221 223456899999999999889999999999999999999999999764333222111111 1 122
Q ss_pred CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005859 634 SVSEASNLGQIALHCTHESPSHRP-----SIENVMQ 664 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~ 664 (673)
+...+.++.+++.+||+.||++|| ++.|+++
T Consensus 241 p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 334457899999999999999999 7778764
No 120
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=364.18 Aligned_cols=262 Identities=22% Similarity=0.408 Sum_probs=199.5
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHH--HhccCCCCceeEeeEEec---CCCCe
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKI--LTSLKHENLASLRGICCS---KGRGE 475 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~---~~~~~ 475 (673)
.++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++.+.. .+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35788999999999999999987 5899999998643 23445555555 445899999999985532 33346
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC-------CCCcccCCcCCCCeEecCCCCeee
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-------RPGLVHPNLSAEKVLIHRRYNPLL 548 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------~~~ivHrDlk~~NILl~~~~~~kl 548 (673)
.++||||+++|+|.+++.. ...++..+.+++.||+.||+|||+. ++||+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 7899999999999999963 2358999999999999999999986 447999999999999999999999
Q ss_pred ccccccccccCcch-------hhhhccCCCCCccCCccccC-------CCCCcchhHHHHHHHHHHHHhCCCCCChhhHh
Q 005859 549 SDSGLHKLLADDIV-------FSMLKASAAMGYLAPEYTTT-------GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQ 614 (673)
Q Consensus 549 ~DfGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~ 614 (673)
+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||+||..|+.+....
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987654221 11224468999999999986 35678999999999999999998776443211
Q ss_pred hhhcc------------------chhhhcCCcCCCCC--CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 615 AAESS------------------KVEDFIDPNLEGKF--SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 615 ~~~~~------------------~~~~~~~~~~~~~~--~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
..... .......+.+...+ ....+.++.+++.+||+.||++|||++|+++.|++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 00000 00011111111111 234667899999999999999999999999999998763
No 121
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=367.69 Aligned_cols=250 Identities=18% Similarity=0.330 Sum_probs=202.4
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||.||+|+... ++.||+|++.+... ....+.+.+|+++|++++|||||++++++.. .+..++
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~~~l 92 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD--EEDMFM 92 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCEEEE
Confidence 578899999999999999999765 88999999975421 2345688999999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 93 v~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ--RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999999999973 34699999999999999999999998 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccC---CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTT---GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
... ......||+.|+|||++.. ..|+.++|||||||++|||+||+.||........ ......+... ...++.
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-~~~~~~~~~~--~~~~p~ 241 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETT--VVTYPS 241 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-HHHHHHHHHC--CCCCCT
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-HHHHHHHhhc--ccCCCC
Confidence 432 2345679999999999874 4589999999999999999999999964321110 0011111111 112334
Q ss_pred HHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 005859 636 SEASNLGQIALHCTHESPSHRPS-IENVMQ 664 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs-~~evl~ 664 (673)
..+..+.+++.+||+.||++||+ ++++.+
T Consensus 242 ~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 242 AWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred cCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 45578999999999999999998 666653
No 122
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-42 Score=365.34 Aligned_cols=265 Identities=22% Similarity=0.358 Sum_probs=211.1
Q ss_pred HHhcCCccccccccCCcceEEEEEEcC-C-----cEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecC
Q 005859 399 RATQCFSEANLLGKSSFSATYKGILRD-G-----SVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSK 471 (673)
Q Consensus 399 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 471 (673)
...++|...+.||+|+||.||+|.... + ..||+|.+.........+.+.+|+++++++ +||||+++++++..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH- 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-
Confidence 345789999999999999999999653 2 479999997654334456799999999999 89999999999954
Q ss_pred CCCeEEEEEeecCCCChhhhhccccC----------CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec
Q 005859 472 GRGECFLIYDFVPNGNLLQHLDLEAG----------SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541 (673)
Q Consensus 472 ~~~~~~lv~E~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~ 541 (673)
.+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. ||+||||||+|||++
T Consensus 122 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 -GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLT 198 (333)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGCEEE
T ss_pred -CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC--CcccCCcccceEEEC
Confidence 4678999999999999999974321 123579999999999999999999998 899999999999999
Q ss_pred CCCCeeeccccccccccCcchh-hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhcc
Q 005859 542 RRYNPLLSDSGLHKLLADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESS 619 (673)
Q Consensus 542 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~ 619 (673)
.++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||+| |..||...........
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 278 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence 9999999999999866443221 1223446778999999998899999999999999999999 8888865422211111
Q ss_pred chhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..... .....+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 279 ~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 279 LVKDG----YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcC----CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 11111 1112233345789999999999999999999999999998764
No 123
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=368.14 Aligned_cols=248 Identities=21% Similarity=0.254 Sum_probs=196.5
Q ss_pred ccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEEeec
Q 005859 405 SEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483 (673)
Q Consensus 405 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~E~~ 483 (673)
...+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~lv~E~~ 168 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFES--KNDIVLVMEYV 168 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEEEEECC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEE--CCEEEEEEeCC
Confidence 34678999999999999975 58999999997653 2345689999999999999999999999965 47899999999
Q ss_pred CCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe--cCCCCeeeccccccccccCcc
Q 005859 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI--HRRYNPLLSDSGLHKLLADDI 561 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl--~~~~~~kl~DfGla~~~~~~~ 561 (673)
++|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+|||+ ++++.+||+|||+++......
T Consensus 169 ~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 169 DGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM--YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 999999988632 24589999999999999999999997 89999999999999 567899999999998765432
Q ss_pred hhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHHH
Q 005859 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNL 641 (673)
Q Consensus 562 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 641 (673)
. .....||+.|+|||++....++.++|||||||++|||+||+.||................. ..........+.++
T Consensus 244 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~ 319 (373)
T 2x4f_A 244 K--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW--DLEDEEFQDISEEA 319 (373)
T ss_dssp B--CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--CSCSGGGTTSCHHH
T ss_pred c--cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--CCChhhhccCCHHH
Confidence 2 2334689999999999988999999999999999999999999976543322221111111 11111112345789
Q ss_pred HHHHHHccccCCCCCCCHHHHHH
Q 005859 642 GQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 642 ~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+++.+||+.||++|||+.|+++
T Consensus 320 ~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 320 KEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHhc
Confidence 99999999999999999999986
No 124
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.8e-42 Score=364.71 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=204.5
Q ss_pred HhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCe
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGE 475 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 475 (673)
..++|...+.||+|+||+||+|+.+. |+.||||++.+... ....+.+.+|.+++..+ +||||+++++++.. .+.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~--~~~ 95 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--MDR 95 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC--SSE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc--CCE
Confidence 34679999999999999999999875 88999999976421 23456788999999998 89999999999854 478
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK--GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC--CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 99999999999999999732 4589999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. .. ..++.
T Consensus 170 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~----~~--~~~p~ 242 (353)
T 2i0e_A 170 ENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME----HN--VAYPK 242 (353)
T ss_dssp CCCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----CC--CCCCT
T ss_pred ccccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh----CC--CCCCC
Confidence 6432211 23345799999999999999999999999999999999999999976443322221111 11 12334
Q ss_pred HHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005859 636 SEASNLGQIALHCTHESPSHRPS-----IENVMQ 664 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~ 664 (673)
..+.++.+++.+||+.||++||+ ++|+++
T Consensus 243 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 45678999999999999999995 466653
No 125
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.8e-42 Score=361.57 Aligned_cols=247 Identities=17% Similarity=0.278 Sum_probs=198.9
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCC--cHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKS--DEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~ 477 (673)
++|...+.||+|+||+||+|+.+. ++.||||++.+..... ..+.+.+|.++++++ +||||+++++++.. .+..+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~--~~~~~ 86 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLF 86 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe--CCEEE
Confidence 568889999999999999999864 8999999998654322 235688999999988 89999999999954 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++.. ...+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++..
T Consensus 87 lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 99999999999999973 24589999999999999999999998 8999999999999999999999999999864
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhh-----hhccchhhhcCCcCCCC
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA-----AESSKVEDFIDPNLEGK 632 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 632 (673)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+.... ..
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~--~~ 237 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IR 237 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC--CC
T ss_pred cCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC--CC
Confidence 3221 12334579999999999999999999999999999999999999996421100 0000111111111 12
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCH
Q 005859 633 FSVSEASNLGQIALHCTHESPSHRPSI 659 (673)
Q Consensus 633 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~ 659 (673)
++...+.++.+++.+||+.||++||++
T Consensus 238 ~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 334456789999999999999999996
No 126
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.5e-42 Score=355.62 Aligned_cols=263 Identities=17% Similarity=0.269 Sum_probs=199.1
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|++++++++||||+++++++... +..++
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~l 109 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--NELNI 109 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--CcEEE
Confidence 46899999999999999999975 589999999976432 22346789999999999999999999999664 68999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR--RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC--CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999975333345689999999999999999999998 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.... ......++..|+|||.+.+..++.++||||||+++|||++|+.||........ .....+.............+
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 264 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY--SLCKKIEQCDYPPLPSDHYS 264 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH--HHHHHHHTTCSCCCCTTTSC
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH--HHHHHhhcccCCCCcccccC
Confidence 4321 12234688999999999998999999999999999999999999864321100 00111111111111123345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.++.+++.+||+.||++|||+.+|++.|+++..
T Consensus 265 ~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 265 EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 789999999999999999999999999998854
No 127
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=359.48 Aligned_cols=265 Identities=20% Similarity=0.314 Sum_probs=208.7
Q ss_pred hcCCccccccccCCcceEEEEEE-cCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecC--CCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSK--GRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~~~ 477 (673)
.++|...+.||+|+||.||+++. .+++.||||++.... ....+.+.+|++++++++||||+++++++... .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 46799999999999999999997 458999999986543 33456789999999999999999999998632 235789
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++.........+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999999975443456799999999999999999999998 8999999999999999999999999998765
Q ss_pred cCcch--------hhhhccCCCCCccCCccccCCC---CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcC
Q 005859 558 ADDIV--------FSMLKASAAMGYLAPEYTTTGR---FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626 (673)
Q Consensus 558 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~ 626 (673)
..... .......|+..|+|||.+.... ++.++||||||+++|||++|+.||........ .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD---SVALAVQ 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS---CHHHHHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc---hhhHHhh
Confidence 32110 0112345789999999987654 78999999999999999999999865322111 1111111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
...........+.++.+++.+||+.||.+|||+.++++.|+++..
T Consensus 262 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 262 NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 111111223345789999999999999999999999999998754
No 128
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=363.34 Aligned_cols=265 Identities=22% Similarity=0.391 Sum_probs=210.1
Q ss_pred hcCCccccccccCCcceEEEEEE-----cCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 401 TQCFSEANLLGKSSFSATYKGIL-----RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
.++|...+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++...+...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 35688899999999999999984 358899999997643 334568999999999999999999999987655557
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC--CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 89999999999999999743 23589999999999999999999987 89999999999999999999999999998
Q ss_pred cccCcchh--hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh-----------ccchh
Q 005859 556 LLADDIVF--SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE-----------SSKVE 622 (673)
Q Consensus 556 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~-----------~~~~~ 622 (673)
........ ......++..|+|||.+.+..++.++||||||+++|||+||+.|+......... ...+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 76543221 122345677899999999888999999999999999999999887543211100 00111
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 623 DFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+.+........+...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1122221222344556789999999999999999999999999998864
No 129
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-42 Score=362.46 Aligned_cols=261 Identities=16% Similarity=0.249 Sum_probs=197.7
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC--cHHHHHHHHHHHhccCCCCceeEeeEEecCCCC--e
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS--DEGEFLKGLKILTSLKHENLASLRGICCSKGRG--E 475 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~--~ 475 (673)
.++|...+.||+|+||.||+|+.. +++.||||++....... ....+.+|++++++++||||+++++++...... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 357889999999999999999974 58999999997654222 235788999999999999999999998654322 4
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.++||||+++|+|.+++.. ...+++..++.++.|++.||+|||++ ||+||||||+|||++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN--GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 5899999999999999973 24589999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcch--hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 556 LLADDIV--FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 556 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.................. .....
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~ 242 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI--PPSAR 242 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC--CHHHH
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC--Ccccc
Confidence 7654321 1223356899999999999999999999999999999999999999764332221111111100 00011
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHH-HHHHHh
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVM-QELSSI 669 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl-~~L~~i 669 (673)
....+.++.+++.+||+.||++||++.+++ +.+.++
T Consensus 243 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 122457899999999999999999665544 555554
No 130
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=364.39 Aligned_cols=252 Identities=20% Similarity=0.326 Sum_probs=199.3
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCC--CCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKH--ENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~~~ 477 (673)
.++|.+.+.||+|+||.||++...+++.||||++...... ...+.+.+|++++++++| |||+++++++.. .+..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~--~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT--DQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee--CCEEE
Confidence 4568999999999999999999988999999999765322 223678999999999976 999999999965 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+|||| .+|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++ ++.+||+|||+++..
T Consensus 86 lv~e~-~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~--~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH--GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEECC-CSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEeC-CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99995 58899999973 34689999999999999999999998 899999999999997 578999999999876
Q ss_pred cCcchh-hhhccCCCCCccCCccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhc
Q 005859 558 ADDIVF-SMLKASAAMGYLAPEYTTT-----------GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI 625 (673)
Q Consensus 558 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~ 625 (673)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~ 234 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAII 234 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHh
Confidence 543321 2234579999999999864 678999999999999999999999996532221 1222333
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005859 626 DPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~ 665 (673)
++.....++...+.++.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 3333334444455788999999999999999999999853
No 131
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9e-43 Score=368.35 Aligned_cols=262 Identities=13% Similarity=0.163 Sum_probs=199.1
Q ss_pred hcCCccccccccCCcceEEEEEEc----CCcEEEEEEecccCCCC----------cHHHHHHHHHHHhccCCCCceeEee
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKS----------DEGEFLKGLKILTSLKHENLASLRG 466 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l~~ 466 (673)
.++|...+.||+|+||.||+|+.. ++..||||++....... ....+.+|+.+++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357899999999999999999976 47789999987653110 1234678889999999999999999
Q ss_pred EEecC--CCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC
Q 005859 467 ICCSK--GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544 (673)
Q Consensus 467 ~~~~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~ 544 (673)
++... +....++||||+ +++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN--EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCcCHHHEEEccCC
Confidence 98762 246789999999 99999999732 3699999999999999999999988 899999999999999887
Q ss_pred --CeeeccccccccccCcchh------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh
Q 005859 545 --NPLLSDSGLHKLLADDIVF------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA 616 (673)
Q Consensus 545 --~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~ 616 (673)
.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 9999999999876433211 12345789999999999998999999999999999999999999954221111
Q ss_pred hccchhhhcCCcCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005859 617 ESSKVEDFIDPNLEGK-----FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i 669 (673)
............+... .....+.++.+++.+||+.||++||++.+|++.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 1101111111111000 0013456899999999999999999999999999875
No 132
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.2e-42 Score=358.23 Aligned_cols=258 Identities=21% Similarity=0.332 Sum_probs=206.2
Q ss_pred HhcCCcccc-ccccCCcceEEEEEEc---CCcEEEEEEecccCCCC-cHHHHHHHHHHHhccCCCCceeEeeEEecCCCC
Q 005859 400 ATQCFSEAN-LLGKSSFSATYKGILR---DGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRGICCSKGRG 474 (673)
Q Consensus 400 ~~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (673)
..++|...+ .||+|+||.||+|.+. +++.||||++....... ..+++.+|++++++++||||+++++++. .+
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---~~ 90 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE---AE 90 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE---SS
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC---CC
Confidence 345677777 9999999999999653 36889999997653222 2467999999999999999999999983 25
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
..++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CcEEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC--CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 68899999999999999973 24589999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCcchh--hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCC
Q 005859 555 KLLADDIVF--SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEG 631 (673)
Q Consensus 555 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
+........ ......++..|+|||.+.+..++.++||||||+++|||+| |+.||.......... .+.. ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-~~~~----~~~~ 239 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEK----GERM 239 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-HHHT----TCCC
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHHc----CCCC
Confidence 876543221 1223346788999999988889999999999999999999 999987643322111 1111 1112
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 632 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+...+..+.+++.+||+.||++||++.++++.|++++.
T Consensus 240 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 240 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2334456789999999999999999999999999999875
No 133
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.7e-42 Score=352.12 Aligned_cols=253 Identities=24% Similarity=0.431 Sum_probs=200.8
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
.++|...+.||+|+||.||+|... |+.||||++... ...+.+.+|++++++++||||+++++++... .+..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CCceEEEE
Confidence 457889999999999999999875 889999998754 2456899999999999999999999987543 34689999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||+++|+|.+++... ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 95 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 95 EYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp CCCTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred ecCCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC--CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 999999999999743 123488999999999999999999997 8999999999999999999999999998765432
Q ss_pred chhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||.......... .+ ........+...+.
T Consensus 171 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~-~~----~~~~~~~~~~~~~~ 241 (278)
T 1byg_A 171 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-RV----EKGYKMDAPDGCPP 241 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHH-HH----TTTCCCCCCTTCCH
T ss_pred ----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HH----hcCCCCCCcccCCH
Confidence 123356888999999998899999999999999999998 999986543221111 11 11112223344567
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 242 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999998753
No 134
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.9e-42 Score=367.21 Aligned_cols=248 Identities=19% Similarity=0.284 Sum_probs=194.3
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHH-HhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKI-LTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|+..+.||+|+||+||+|+.+. ++.||||++.+... ......+.+|..+ ++.++||||+++++++.. .+..
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~--~~~~ 114 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKL 114 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC--SSEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe--CCEE
Confidence 3578999999999999999999875 88999999976542 2233456777776 577899999999999955 4789
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++.
T Consensus 115 ~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 115 YFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 999999999999999973 24588999999999999999999988 899999999999999999999999999986
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............. ... .++..
T Consensus 189 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~----~~~--~~~~~ 261 (373)
T 2r5t_A 189 NIEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN----KPL--QLKPN 261 (373)
T ss_dssp GBCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH----SCC--CCCSS
T ss_pred cccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh----ccc--CCCCC
Confidence 433221 23346799999999999999999999999999999999999999976443322222211 111 12233
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHH
Q 005859 637 EASNLGQIALHCTHESPSHRPSIENVM 663 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~~evl 663 (673)
.+..+.+++.+||+.||++||++.+.+
T Consensus 262 ~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 262 ITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 457889999999999999999986433
No 135
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-42 Score=378.00 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=196.3
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccC--CCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTS--CKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... .......+.+|++++++++||||+++++++... +..+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~--~~~~ 224 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--DRLC 224 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET--TEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC--CEEE
Confidence 467999999999999999999976 48999999997642 123345788999999999999999999999654 7899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhc-CCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG-KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ . ||+||||||+|||++.++.+||+|||+++.
T Consensus 225 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~--giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EEECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEEeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 99999999999999963 3468999999999999999999997 6 899999999999999999999999999986
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||............... . ..++..
T Consensus 299 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~----~--~~~p~~ 371 (446)
T 4ejn_A 299 GIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME----E--IRFPRT 371 (446)
T ss_dssp TCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----C--CCCCTT
T ss_pred ccCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC----C--CCCCcc
Confidence 443221 234467999999999999999999999999999999999999999764333222211111 1 112334
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005859 637 EASNLGQIALHCTHESPSHRP-----SIENVMQ 664 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~ 664 (673)
.+.++.+++.+||+.||++|| +++|+++
T Consensus 372 ~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 372 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 457899999999999999999 9999975
No 136
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=353.07 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=200.3
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC----CCcHHHHHHHHHHHhccC---CCCceeEeeEEecC
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC----KSDEGEFLKGLKILTSLK---HENLASLRGICCSK 471 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 471 (673)
..++|+..+.||+|+||+||+|+.. +++.||||++..... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3568999999999999999999964 589999999975431 112356778888887775 99999999999764
Q ss_pred CCC---eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeee
Q 005859 472 GRG---ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548 (673)
Q Consensus 472 ~~~---~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl 548 (673)
..+ ..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEEcCCCCEEE
Confidence 322 5789999996 69999997432 23489999999999999999999998 7999999999999999999999
Q ss_pred ccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCc
Q 005859 549 SDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628 (673)
Q Consensus 549 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~ 628 (673)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..................+.
T Consensus 162 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 162 ADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp CSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999998765432 23345689999999999999999999999999999999999999965433222111111100000
Q ss_pred --------------CC--C-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 629 --------------LE--G-----KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 629 --------------~~--~-----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.. . ......+..+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0 001123578899999999999999999999985
No 137
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=357.83 Aligned_cols=245 Identities=19% Similarity=0.239 Sum_probs=193.8
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|+..+.||+|+||+||+|+.. +|+.||||++...... .....+..|+..+.++ +||||++++++|.. .+..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~--~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE--GGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe--CCEEEE
Confidence 57999999999999999999987 5999999998654321 2234566677666666 89999999999965 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+ +|+|.+++... ...++|..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 135 v~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ--GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 77999988643 24599999999999999999999987 79999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+........ +.........+...+
T Consensus 209 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 278 (311)
T 3p1a_A 209 TAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ-------LRQGYLPPEFTAGLS 278 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH-------HTTTCCCHHHHTTSC
T ss_pred cCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH-------HhccCCCcccccCCC
Confidence 432 2334568999999998875 799999999999999999999766544322111 111111111122345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.++.+++.+||+.||++|||++|+++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 78999999999999999999999986
No 138
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.1e-42 Score=368.33 Aligned_cols=250 Identities=21% Similarity=0.332 Sum_probs=198.7
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccC--CCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLK--HENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~~~l 478 (673)
.+|.+.+.||+|+||+||+|...+++.||||++...... ...+.+.+|+++|++++ ||||+++++++... +..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~--~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD--QYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--SEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC--CEEEE
Confidence 468999999999999999999888999999999765322 23467899999999996 59999999998654 67999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||| +.+++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++ ++.+||+|||+++...
T Consensus 134 v~E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~--~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH--GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTT--TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 5688999999742 3688999999999999999999987 899999999999996 5789999999998765
Q ss_pred Ccchh-hhhccCCCCCccCCccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcC
Q 005859 559 DDIVF-SMLKASAAMGYLAPEYTTT-----------GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626 (673)
Q Consensus 559 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~ 626 (673)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+..+++
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~ 282 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIID 282 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHC
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhC
Confidence 43221 2234579999999999865 368999999999999999999999996542211 12223333
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.....++...+.++.+++.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 33333333334578899999999999999999999985
No 139
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.4e-42 Score=391.16 Aligned_cols=250 Identities=21% Similarity=0.333 Sum_probs=202.1
Q ss_pred cccccCCcceEEEEEEc---CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEEeec
Q 005859 408 NLLGKSSFSATYKGILR---DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483 (673)
Q Consensus 408 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~E~~ 483 (673)
+.||+|+||+||+|.+. .++.||||+++.... ....++|.+|+++|++++|||||++++++.. +..++|||||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCEEEEEEcc
Confidence 47999999999999764 367899999976532 2235789999999999999999999999853 4578999999
Q ss_pred CCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCcch-
Q 005859 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIV- 562 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~- 562 (673)
++|+|.+++.. ...+++..++.|+.||+.||+|||++ ||+||||||+|||+++++.+||+|||+++.+..+..
T Consensus 452 ~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~--~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHC--CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999999963 34689999999999999999999998 899999999999999999999999999987754322
Q ss_pred -hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHH
Q 005859 563 -FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN 640 (673)
Q Consensus 563 -~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.......+++.|+|||++....++.++|||||||++|||+| |+.||.......... .+........+..++.+
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~-----~i~~~~~~~~p~~~~~~ 600 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-----MLEKGERMGCPAGCPRE 600 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-----HHHTTCCCCCCTTCCHH
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHH
Confidence 12233456788999999999899999999999999999999 999997654332211 11111122334456688
Q ss_pred HHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 641 LGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 641 l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+.+++.+||+.||++||++.+|++.|++++.
T Consensus 601 l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 601 MYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998864
No 140
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=8.5e-42 Score=357.15 Aligned_cols=252 Identities=21% Similarity=0.341 Sum_probs=205.1
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC-----cHHHHHHHHHHHhccCCCCceeEeeEEecCCCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-----DEGEFLKGLKILTSLKHENLASLRGICCSKGRG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++....... ..+.+.+|++++++++||||+++++++.. .+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN--RT 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SS
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec--CC
Confidence 356889999999999999999976 48999999997654322 35689999999999999999999999954 47
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC----Ceeecc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY----NPLLSD 550 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~----~~kl~D 550 (673)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++ .+||+|
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~--~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 89999999999999999973 34689999999999999999999998 899999999999999888 799999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCC
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLE 630 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
||+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||............... .....
T Consensus 163 fg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~ 238 (321)
T 2a2a_A 163 FGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--SYDFD 238 (321)
T ss_dssp CTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT--CCCCC
T ss_pred CccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--ccccC
Confidence 99998765432 223456899999999999889999999999999999999999999654332221111110 00111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 631 GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 631 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0111223467899999999999999999999986
No 141
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.7e-42 Score=367.33 Aligned_cols=258 Identities=17% Similarity=0.295 Sum_probs=201.1
Q ss_pred hcCCccccccccC--CcceEEEEEEc-CCcEEEEEEecccCCCC-cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKS--SFSATYKGILR-DGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|++.+.||+| +||.||+|+.. +|+.||||++....... ..+.+.+|++++++++|||||++++++... +..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC--CEE
Confidence 3578999999999 99999999987 59999999997654322 235688899999999999999999999654 789
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++|||||++|+|.+++.... ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM--GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999997432 24589999999999999999999998 899999999999999999999999999865
Q ss_pred ccCcch------hhhhccCCCCCccCCccccC--CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhc---
Q 005859 557 LADDIV------FSMLKASAAMGYLAPEYTTT--GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI--- 625 (673)
Q Consensus 557 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~--- 625 (673)
...... .......||..|+|||++.+ ..++.++|||||||++|||+||+.||.................
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 432211 11123468889999999987 5799999999999999999999999965322111111000000
Q ss_pred -CCc------------------------------------CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 626 -DPN------------------------------------LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 626 -~~~------------------------------------~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.. .....+...+.++.+|+.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000 000122334567999999999999999999999985
No 142
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8e-42 Score=349.03 Aligned_cols=246 Identities=18% Similarity=0.296 Sum_probs=181.2
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|.+.+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 90 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS--KDEIIM 90 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSCEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec--CCeEEE
Confidence 47889999999999999999965 589999999976532 2235678999999999999999999999965 467899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+ +++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||++++++.+||+|||+++...
T Consensus 91 v~e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~--~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred Eehhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 99999 7788888863 34589999999999999999999988 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... .....||..|+|||.+.+..+ +.++||||||+++|||+||+.||............... . ...+...
T Consensus 164 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----~--~~~~~~~ 235 (275)
T 2eue_A 164 DGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG----V--YTLPKFL 235 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----C--CCCCTTS
T ss_pred Cccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----C--CCCCccC
Confidence 4332 233468999999999987765 78999999999999999999999764332221111111 0 1223334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 236 SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 577899999999999999999999975
No 143
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.9e-42 Score=360.74 Aligned_cols=247 Identities=22% Similarity=0.360 Sum_probs=200.3
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC--cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS--DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.+.|...+.||+|+||+||+|+.. +|+.||||++....... ..+++.+|++++++++||||+++++++... +..+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~ 130 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--HTAW 130 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--CeEE
Confidence 355888999999999999999964 68999999997653221 235789999999999999999999999654 7899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||++ |+|.+++... ...+++..+..++.|+++||+|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 131 lv~e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 131 LVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH--NMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EEEECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EEEecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC--CeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 9999997 6888887532 24689999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCcccc---CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTT---TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
... ....||+.|+|||++. .+.++.++|||||||++|||+||+.||............. ....+.. ..
T Consensus 205 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~-~~~~~~~---~~ 275 (348)
T 1u5q_A 205 APA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPAL---QS 275 (348)
T ss_dssp SSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HSCCCCC---CC
T ss_pred CCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-hcCCCCC---CC
Confidence 532 2356899999999984 5679999999999999999999999986643322211111 1111111 12
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+..+.+++.+||+.||++|||++++++
T Consensus 276 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 234567899999999999999999999875
No 144
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2e-41 Score=357.40 Aligned_cols=263 Identities=19% Similarity=0.316 Sum_probs=207.9
Q ss_pred HHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhc--cCCCCceeEeeEEecCCC--
Q 005859 398 ERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGICCSKGR-- 473 (673)
Q Consensus 398 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~~-- 473 (673)
....++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|++++.. ++||||+++++++.....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 34456899999999999999999998 4899999998643 35678889999887 799999999999876532
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHh--------cCCCCcccCCcCCCCeEecCCCC
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH--------GKRPGLVHPNLSAEKVLIHRRYN 545 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~ivHrDlk~~NILl~~~~~ 545 (673)
...++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. ||+||||||+||+++.++.
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~--~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP--AIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC--EEECSCCSGGGEEECTTSC
T ss_pred ceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC--CeeeCCCCHHHEEECCCCC
Confidence 278999999999999999963 35899999999999999999999 55 8999999999999999999
Q ss_pred eeeccccccccccCcchh---hhhccCCCCCccCCccccCC------CCCcchhHHHHHHHHHHHHhC----------CC
Q 005859 546 PLLSDSGLHKLLADDIVF---SMLKASAAMGYLAPEYTTTG------RFTEKSDIYAFGMIVFQILSG----------KC 606 (673)
Q Consensus 546 ~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSfGvvl~el~tG----------~~ 606 (673)
+||+|||+++........ ......||..|+|||++.+. .++.++|||||||++|||+|| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 999999999876543211 12345689999999999865 234789999999999999999 67
Q ss_pred CCChhhHhhhhcc-----chhhhcCCcCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcC
Q 005859 607 SITPFTRQAAESS-----KVEDFIDPNLEGK-FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672 (673)
Q Consensus 607 p~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~~ 672 (673)
||........... .......+.+... .....+..+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 7754321110001 1111112222211 1235678899999999999999999999999999998753
No 145
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.7e-41 Score=348.12 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=204.6
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|...+.||+|+||.||+|.... ++.||+|++...... ...+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc--CCEEEE
Confidence 4679999999999999999999764 899999999765422 234678899999999999999999999954 477899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC---eeeccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN---PLLSDSGLHK 555 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~---~kl~DfGla~ 555 (673)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||++.
T Consensus 83 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 9999999999998863 24589999999999999999999998 8999999999999987655 9999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
....... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||.................. .......
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~ 232 (284)
T 3kk8_A 157 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWD 232 (284)
T ss_dssp ECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTT
T ss_pred EcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhc
Confidence 7654322 23456899999999999999999999999999999999999998664333222211111111 1111122
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 233 TVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 34578999999999999999999999986
No 146
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9e-42 Score=367.54 Aligned_cols=251 Identities=14% Similarity=0.227 Sum_probs=191.2
Q ss_pred CCccc-cccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhc-cCCCCceeEeeEEec--CCCCeEE
Q 005859 403 CFSEA-NLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTS-LKHENLASLRGICCS--KGRGECF 477 (673)
Q Consensus 403 ~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~--~~~~~~~ 477 (673)
+|... +.||+|+||+||+|+.. +|+.||||++.. ...+.+|++++.+ .+||||+++++++.. .+.+..+
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 45554 68999999999999976 489999999853 2467789988755 489999999998854 2245789
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC---CCCeeecccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR---RYNPLLSDSGLH 554 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~---~~~~kl~DfGla 554 (673)
+||||+++|+|.+++... ....+++..+..|+.||+.||+|||+. ||+||||||+|||++. ++.+||+|||++
T Consensus 136 lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 999999999999999743 224689999999999999999999997 8999999999999998 789999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCC--cCCCC
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP--NLEGK 632 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~ 632 (673)
+...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...............+... .....
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT
T ss_pred cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc
Confidence 8765432 2334578999999999999999999999999999999999999996543221111111111111 11111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005859 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665 (673)
Q Consensus 633 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~ 665 (673)
.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 123455789999999999999999999999863
No 147
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=357.79 Aligned_cols=244 Identities=18% Similarity=0.318 Sum_probs=202.6
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC-------cHHHHHHHHHHHhccCCCCceeEeeEEecC
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-------DEGEFLKGLKILTSLKHENLASLRGICCSK 471 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 471 (673)
..++|...+.||+|+||.||+|+.. +++.||||++....... ..+.+.+|++++++++||||+++++++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~- 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN- 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 4568999999999999999999965 58999999998654211 23467889999999999999999999954
Q ss_pred CCCeEEEEEeecCCC-ChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecc
Q 005859 472 GRGECFLIYDFVPNG-NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSD 550 (673)
Q Consensus 472 ~~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~D 550 (673)
.+..++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|
T Consensus 101 -~~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 101 -QGFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK--DIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp -SSEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTSCEEECC
T ss_pred -CCEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC--CeEEeccCHHHEEEcCCCcEEEee
Confidence 47899999999777 99999873 34599999999999999999999998 899999999999999999999999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcC
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNL 629 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
||+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .....
T Consensus 174 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~---- 241 (335)
T 3dls_A 174 FGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEAAI---- 241 (335)
T ss_dssp CTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTTCC----
T ss_pred cccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hhhcc----
Confidence 999987655432 234568999999999988776 88999999999999999999999753221 11111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005859 630 EGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665 (673)
Q Consensus 630 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~ 665 (673)
..+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 242 --~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 242 --HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112245678999999999999999999999863
No 148
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=9.2e-42 Score=349.39 Aligned_cols=248 Identities=21% Similarity=0.354 Sum_probs=201.4
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|...+.||+|+||.||+|+... ++.||||++..... ......+.+|++++++++||||+++++++.. .+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 85 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD--ATRVY 85 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec--CCEEE
Confidence 4678999999999999999999765 77999999865421 2234678999999999999999999999955 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~--~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT--TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC--CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999998632 4589999999999999999999987 8999999999999999999999999998655
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... .....++..|+|||.+.+..++.++||||||+++|||++|+.||........... +.. .....+...
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~-----~~~~~~~~~ 230 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-ISR-----VEFTFPDFV 230 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-HHH-----TCCCCCTTS
T ss_pred Cccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH-HHh-----CCCCCCCcC
Confidence 4332 2345689999999999998999999999999999999999999875433222111 111 111223334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQE 665 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~ 665 (673)
+..+.+++.+||+.||++|||++|+++.
T Consensus 231 ~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 231 TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 5788999999999999999999999863
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-41 Score=373.05 Aligned_cols=247 Identities=19% Similarity=0.336 Sum_probs=204.3
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|+++++.++||||+++++++.. .+..++
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~--~~~~~l 93 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST--PSDIFM 93 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEE
Confidence 46888999999999999999976 599999999975421 1234678999999999999999999999955 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 94 v~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 94 VMEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT--TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999999963 34699999999999999999999987 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... ....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... .+.+... ..+...
T Consensus 168 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~----~i~~~~~--~~p~~~ 239 (476)
T 2y94_A 168 DGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK----KICDGIF--YTPQYL 239 (476)
T ss_dssp TTCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH----HHHTTCC--CCCTTC
T ss_pred cccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH----HHhcCCc--CCCccC
Confidence 4322 234579999999999988775 789999999999999999999997543222111 1111111 122334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||++|||+.|+++
T Consensus 240 s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 240 NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 567899999999999999999999986
No 150
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.2e-42 Score=358.20 Aligned_cols=262 Identities=20% Similarity=0.318 Sum_probs=205.8
Q ss_pred hcCCccccccccCCcceEEEEEEc------CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (673)
.++|...+.||+|+||.||+|++. +++.||||++..........++.+|+.++++++||||+++++++.. .+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--SL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC--CC
Confidence 467899999999999999999842 3778999999755434445689999999999999999999999954 46
Q ss_pred eEEEEEeecCCCChhhhhccccC---CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC---CCCeee
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAG---SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR---RYNPLL 548 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~---~~~~kl 548 (673)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. ||+||||||+||+++. +..+||
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC--CeecCcCCHhHEEEecCCCcceEEE
Confidence 78999999999999999975432 124589999999999999999999988 8999999999999994 446999
Q ss_pred ccccccccccCcch-hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcC
Q 005859 549 SDSGLHKLLADDIV-FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFID 626 (673)
Q Consensus 549 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~ 626 (673)
+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||........... +..
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~~--- 260 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF-VTS--- 260 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHT---
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHH-Hhc---
Confidence 99999986543321 12223457889999999998899999999999999999998 9888865433221111 111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
......+...+..+.+++.+||+.||++||++.++++.|+.+..
T Consensus 261 -~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 261 -GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 11112233455789999999999999999999999999998754
No 151
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.8e-41 Score=346.33 Aligned_cols=253 Identities=20% Similarity=0.303 Sum_probs=204.7
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++... +..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG--NIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC--CEEEEE
Confidence 357889999999999999999976 58999999997654444557899999999999999999999998654 778999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.++....
T Consensus 84 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 84 LEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC--CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 999999999999862 34689999999999999999999987 899999999999999999999999999986543
Q ss_pred cc-hhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 560 DI-VFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 560 ~~-~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.. ........|+..|+|||.+.+..+ +.++||||||+++|||+||+.||.......... ................
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 234 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKI 234 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH---HHHHTTCTTSTTGGGS
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH---HHhhhcccccCchhhc
Confidence 21 112234568899999999987765 789999999999999999999996543211111 1111111111112344
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 235 DSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 578899999999999999999999975
No 152
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.1e-42 Score=367.97 Aligned_cols=258 Identities=23% Similarity=0.329 Sum_probs=193.1
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccC-CCCceeEeeEEecCCCCeE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLK-HENLASLRGICCSKGRGEC 476 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~ 476 (673)
..++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++++. ||||+++++++...+....
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4568999999999999999999975 589999999865432 233467889999999997 9999999999976655679
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
|+|||||+ |+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~--~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC--CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 99999997 699998863 3589999999999999999999988 899999999999999999999999999986
Q ss_pred ccCc--------------------chhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhh
Q 005859 557 LADD--------------------IVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA 615 (673)
Q Consensus 557 ~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~ 615 (673)
.... ........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5321 0112234578999999999986 579999999999999999999999996543222
Q ss_pred hhccchhhhcCC-----------------------------cCCCCC------------CHHHHHHHHHHHHHccccCCC
Q 005859 616 AESSKVEDFIDP-----------------------------NLEGKF------------SVSEASNLGQIALHCTHESPS 654 (673)
Q Consensus 616 ~~~~~~~~~~~~-----------------------------~~~~~~------------~~~~~~~l~~l~~~Cl~~~p~ 654 (673)
.....+...-.| .....+ ....+.++.+|+.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 111111000000 000000 012346789999999999999
Q ss_pred CCCCHHHHHHH
Q 005859 655 HRPSIENVMQE 665 (673)
Q Consensus 655 ~RPs~~evl~~ 665 (673)
+|||++|+++.
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999753
No 153
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.3e-42 Score=364.07 Aligned_cols=254 Identities=19% Similarity=0.286 Sum_probs=202.8
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||.||+|+.. +++.||+|++.........+.+.+|++++++++||||+++++++... +..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET--TEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC--CEEEEE
Confidence 357899999999999999999976 58999999997654333456899999999999999999999999654 789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.. ||+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHH-CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhC-CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999732 45899999999999999999999832 799999999999999999999999999976543
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhcc--------------------
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS-------------------- 619 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~-------------------- 619 (673)
. ......||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 185 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp H---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred c---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 2 12345689999999999999999999999999999999999999865322111000
Q ss_pred ------------------chhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 620 ------------------KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 620 ------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..................+.++.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000011111111224567999999999999999999999985
No 154
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-41 Score=348.25 Aligned_cols=252 Identities=17% Similarity=0.274 Sum_probs=205.7
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||.||+|+... +..||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFED--NTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCeEEEE
Confidence 4578999999999999999999765 7799999997654 3456789999999999999999999999954 4789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe---cCCCCeeecccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLHKL 556 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl---~~~~~~kl~DfGla~~ 556 (673)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 85 MELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL--NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 999999999998863 34589999999999999999999988 89999999999999 7889999999999987
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH-
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV- 635 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 635 (673)
..... ......+|+.|+|||.+.+ .++.++||||||+++|||+||+.||............... .. ..+.
T Consensus 159 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~--~~~~~ 229 (277)
T 3f3z_A 159 FKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG----TF--TFPEK 229 (277)
T ss_dssp CCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CC--CCCHH
T ss_pred ccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CC--CCCch
Confidence 65432 2234568999999998865 4999999999999999999999999764333222111111 11 1111
Q ss_pred ---HHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHHhh
Q 005859 636 ---SEASNLGQIALHCTHESPSHRPSIENVMQ--ELSSII 670 (673)
Q Consensus 636 ---~~~~~l~~l~~~Cl~~~p~~RPs~~evl~--~L~~i~ 670 (673)
..+..+.+++.+||+.||++|||+.|+++ .+++..
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 269 (277)
T 3f3z_A 230 DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL 269 (277)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence 23578999999999999999999999985 344443
No 155
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.3e-42 Score=378.91 Aligned_cols=252 Identities=16% Similarity=0.254 Sum_probs=204.7
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|...+.||+|+||+||+|+.. +|+.||||++.+... ......+.+|++++++++||||+++++++.. .+..|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~--~~~l~ 261 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET--KTDLC 261 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee--CCEEE
Confidence 367888999999999999999986 499999999976432 2345678999999999999999999999854 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++.........+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++..
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~--gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc--CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 99999999999999875433345699999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..... .....+||+.|+|||++.+..|+.++|||||||++|||+||+.||...............+.... ..++...
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~--~~~p~~~ 416 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA--VTYPDKF 416 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC--CCCCTTS
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc--cCCCccc
Confidence 54322 12335799999999999999999999999999999999999999975421111111111111111 1234445
Q ss_pred HHHHHHHHHHccccCCCCCCCH
Q 005859 638 ASNLGQIALHCTHESPSHRPSI 659 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~ 659 (673)
+..+.+++.+||+.||++||++
T Consensus 417 s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 417 SPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCC
T ss_pred CHHHHHHHHHhccCCHhHCCCC
Confidence 6789999999999999999975
No 156
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-42 Score=364.86 Aligned_cols=255 Identities=16% Similarity=0.292 Sum_probs=203.1
Q ss_pred hcCCccccccccCCcceEEEEEE----cCCcEEEEEEecccCC---CCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAKTSC---KSDEGEFLKGLKILTSL-KHENLASLRGICCSKG 472 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 472 (673)
.++|...+.||+|+||.||+|+. .+++.||||++..... ....+.+.+|+++++++ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 36799999999999999999997 3689999999875431 23345678899999999 699999999998654
Q ss_pred CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccc
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSG 552 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfG 552 (673)
+..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||
T Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 132 -TKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKL--GIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp -TEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred -ceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEECCCCcEEEeeCC
Confidence 6789999999999999999732 4589999999999999999999987 89999999999999999999999999
Q ss_pred ccccccCcchhhhhccCCCCCccCCccccCC--CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCC
Q 005859 553 LHKLLADDIVFSMLKASAAMGYLAPEYTTTG--RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLE 630 (673)
Q Consensus 553 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
+++..............||+.|+|||++.+. .++.++|||||||++|||+||+.||................... .
T Consensus 205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~--~ 282 (355)
T 1vzo_A 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--E 282 (355)
T ss_dssp EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC--C
T ss_pred CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc--C
Confidence 9987654433334445799999999999863 47899999999999999999999986432111111111111111 1
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005859 631 GKFSVSEASNLGQIALHCTHESPSHRP-----SIENVMQE 665 (673)
Q Consensus 631 ~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~ 665 (673)
..++...+..+.+++.+||+.||++|| +++|+++.
T Consensus 283 ~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 123344557889999999999999999 99998753
No 157
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=361.48 Aligned_cols=254 Identities=15% Similarity=0.205 Sum_probs=205.1
Q ss_pred HhcCCccccccccCCcceEEEEE------EcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccC---CCCceeEeeEEec
Q 005859 400 ATQCFSEANLLGKSSFSATYKGI------LRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK---HENLASLRGICCS 470 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 470 (673)
..++|.+.+.||+|+||+||+|+ ..+++.||||++... ...++.+|++++++++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 45779999999999999999994 445889999998643 4567888888888886 9999999999965
Q ss_pred CCCCeEEEEEeecCCCChhhhhccccC-CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC-------
Q 005859 471 KGRGECFLIYDFVPNGNLLQHLDLEAG-SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR------- 542 (673)
Q Consensus 471 ~~~~~~~lv~E~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~------- 542 (673)
. +..++||||+++|+|.+++..... ....+++..++.|+.||+.||+|||++ |||||||||+|||++.
T Consensus 139 ~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 139 Q--NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC--EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp S--SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCSGGGEEECGGGTCC--
T ss_pred C--CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC--CeecCCCCHHHEEecccccCccc
Confidence 4 678999999999999999974322 235699999999999999999999997 8999999999999998
Q ss_pred ----CCCeeeccccccccccCc-chhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh
Q 005859 543 ----RYNPLLSDSGLHKLLADD-IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617 (673)
Q Consensus 543 ----~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~ 617 (673)
++.+||+|||+++.+... .........||..|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-- 292 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-- 292 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--
Confidence 899999999999765321 1122345679999999999999999999999999999999999999986532211
Q ss_pred ccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHHhhc
Q 005859 618 SSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHR-PSIENVMQELSSIIG 671 (673)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~R-Ps~~evl~~L~~i~~ 671 (673)
... ...... . .....+.+++..|++.+|.+| |+++++.+.|++++.
T Consensus 293 -~~~----~~~~~~-~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 293 -CKP----EGLFRR-L--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp -EEE----CSCCTT-C--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred -eee----chhccc-c--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 111 111111 1 124567889999999999999 689999999888764
No 158
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.8e-42 Score=353.74 Aligned_cols=260 Identities=13% Similarity=0.185 Sum_probs=206.3
Q ss_pred hcCCccccccccCCcceEEEEEE-cCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|++++++++|++++..++++... .+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAE-GDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEE-TTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCC-CCceEEE
Confidence 46799999999999999999997 469999999987543 334689999999999999888777766443 4678999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe---cCCCCeeecccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLHKL 556 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl---~~~~~~kl~DfGla~~ 556 (673)
|||+ +++|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||++ ++++.+||+|||+++.
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC--CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 9999 99999999632 24589999999999999999999998 89999999999999 4888999999999987
Q ss_pred ccCcchh------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh---ccchhhhcCC
Q 005859 557 LADDIVF------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE---SSKVEDFIDP 627 (673)
Q Consensus 557 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~---~~~~~~~~~~ 627 (673)
....... ......|+..|+|||.+.+..++.++|||||||++|||+||+.||......... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC
Confidence 6553221 123456899999999999999999999999999999999999999753211100 0000000000
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 628 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
. ........+.++.+++.+||+.||++|||+.+|++.|++++.
T Consensus 238 ~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 238 P-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp C-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred c-hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 0 000112234779999999999999999999999999999865
No 159
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.6e-41 Score=372.25 Aligned_cols=253 Identities=17% Similarity=0.255 Sum_probs=194.8
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCC----CC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKG----RG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~ 474 (673)
.++|...+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+++|+.++|||||++++++.... ..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999976 489999999976431 223467889999999999999999999986532 24
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
..|+||||+++ +|.+.+. ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~--~iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCChHhEEEeCCCCEEEEEEEee
Confidence 68999999975 5776664 2388999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh------------
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE------------ 622 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~------------ 622 (673)
+...... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+..........+.
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 212 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp -----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 8765432 23446789999999999999999999999999999999999999975432211111100
Q ss_pred ------hhcCCc--CC-------------C---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 ------DFIDPN--LE-------------G---KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 ------~~~~~~--~~-------------~---~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+... .. . ......+.++.+|+.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 00 0 001112577999999999999999999999985
No 160
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.1e-42 Score=354.06 Aligned_cols=261 Identities=13% Similarity=0.195 Sum_probs=203.5
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
..++|...+.||+|+||+||+|+.. +++.||||++.... ...++.+|++++++++|++++..++++... .+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAE-GDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEE-TTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---cchHHHHHHHHHHHhcCCCCCCeeeeecCC-CCceEE
Confidence 3468999999999999999999974 58999999876543 224588999999999999888887776543 467899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe---cCCCCeeeccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLHK 555 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl---~~~~~~kl~DfGla~ 555 (673)
||||+ +|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+|||+ ++++.+||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~--~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEcc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 99999 99999998732 24589999999999999999999998 89999999999999 788999999999998
Q ss_pred cccCcch------hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcC
Q 005859 556 LLADDIV------FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNL 629 (673)
Q Consensus 556 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
....... .......||..|+|||.+.+..++.++|||||||++|||+||+.||......... ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~ 235 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKM 235 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccc
Confidence 7654322 1123456899999999999999999999999999999999999999753221110 00111000000
Q ss_pred C---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 630 E---GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 630 ~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
. .......+.++.+++.+||+.||++|||++++++.|+++++
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 0 00111234789999999999999999999999999999875
No 161
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-41 Score=348.48 Aligned_cols=251 Identities=20% Similarity=0.347 Sum_probs=206.7
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEec--------
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS-------- 470 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------- 470 (673)
..++|+..+.||+|+||.||+|+.. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 3457899999999999999999986 69999999986542 357789999999999999999998753
Q ss_pred ------CCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC
Q 005859 471 ------KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544 (673)
Q Consensus 471 ------~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~ 544 (673)
......++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. ||+||||||+||++++++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK--KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEEETT
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC--CeeeccCCHHHEEEcCCC
Confidence 11345799999999999999997432 24689999999999999999999988 899999999999999999
Q ss_pred CeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh
Q 005859 545 NPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF 624 (673)
Q Consensus 545 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~ 624 (673)
.+||+|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||+||..|+...... ....
T Consensus 160 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~------~~~~ 231 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF------FTDL 231 (284)
T ss_dssp EEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH------HHHH
T ss_pred CEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH------HHHh
Confidence 99999999998765432 223456899999999999888999999999999999999999876432211 1111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
....+ +...+..+.+++.+||+.||++|||+.|+++.|..+..
T Consensus 232 ~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 232 RDGII----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HTTCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred hcccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 11112 22234678899999999999999999999999998754
No 162
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.5e-41 Score=349.60 Aligned_cols=250 Identities=24% Similarity=0.415 Sum_probs=202.4
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYES--TTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhccc--CCEEEEE
Confidence 457889999999999999999976 58999999997643 2334578999999999999999999999854 4789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe---cCCCCeeecccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLHKL 556 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl---~~~~~~kl~DfGla~~ 556 (673)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||++ ++++.+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 85 MQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN--GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp ECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 999999999999863 24589999999999999999999998 89999999999999 7888999999999976
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
..... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||................. .........
T Consensus 159 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~ 233 (304)
T 2jam_A 159 EQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDD 233 (304)
T ss_dssp CCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTT
T ss_pred cCCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCcccccc
Confidence 54432 2234589999999999999999999999999999999999999876433222111111111 111122334
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 637 EASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 234 ISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp SCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 5678999999999999999999999985
No 163
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.3e-42 Score=358.64 Aligned_cols=245 Identities=20% Similarity=0.349 Sum_probs=178.5
Q ss_pred ccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CCCceeEeeEEecCCCCeEEEEEeecC
Q 005859 407 ANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HENLASLRGICCSKGRGECFLIYDFVP 484 (673)
Q Consensus 407 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~lv~E~~~ 484 (673)
.+.||+|+||+||+|+.. +++.||||++... ....+.+|+++++++. ||||+++++++.+ .+..++||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHD--QLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc--CCEEEEEEEccC
Confidence 478999999999999986 4899999998643 3567889999999997 9999999999954 478999999999
Q ss_pred CCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC---CeeeccccccccccCcc
Q 005859 485 NGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY---NPLLSDSGLHKLLADDI 561 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~---~~kl~DfGla~~~~~~~ 561 (673)
+|+|.+++.. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++ .+||+|||+++......
T Consensus 90 ~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 90 GGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV--GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp SCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 9999999973 34699999999999999999999987 899999999999998765 79999999998665432
Q ss_pred hhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh---ccchhhhcCCcC--CCCCCHH
Q 005859 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE---SSKVEDFIDPNL--EGKFSVS 636 (673)
Q Consensus 562 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~ 636 (673)
. ......+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+..... .......
T Consensus 164 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (325)
T 3kn6_A 164 Q-PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHT
T ss_pred C-cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccC
Confidence 2 233456899999999999999999999999999999999999999754321110 111111211111 1111123
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 637 EASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.++.+++.+||+.||++|||++|+++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 4678999999999999999999999873
No 164
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.1e-41 Score=369.23 Aligned_cols=254 Identities=19% Similarity=0.280 Sum_probs=192.6
Q ss_pred HHhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCC-------CcHHHHHHHHHHHhccCCCCceeEeeEEec
Q 005859 399 RATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCK-------SDEGEFLKGLKILTSLKHENLASLRGICCS 470 (673)
Q Consensus 399 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (673)
...++|...+.||+|+||+||+|.... ++.||||++...... .....+.+|+++|++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 346789999999999999999999764 899999999764311 112358899999999999999999999843
Q ss_pred CCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC---CCee
Q 005859 471 KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPL 547 (673)
Q Consensus 471 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~---~~~k 547 (673)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.+ ..+|
T Consensus 212 ---~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~--~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 212 ---EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN--GIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp ---SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESSSSSSCCEE
T ss_pred ---CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChHhEEEecCCCcceEE
Confidence 457999999999999998863 35689999999999999999999987 89999999999999754 4599
Q ss_pred eccccccccccCcchhhhhccCCCCCccCCccccC---CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh
Q 005859 548 LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTT---GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF 624 (673)
Q Consensus 548 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~ 624 (673)
|+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||............+...
T Consensus 283 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~ 360 (419)
T 3i6u_A 283 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTT
T ss_pred EeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcC
Confidence 99999998775432 2234578999999999863 568899999999999999999999986532211111111110
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.. ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 361 ~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 361 KY-NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CC-CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00 0000011123578999999999999999999999985
No 165
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-42 Score=363.96 Aligned_cols=259 Identities=14% Similarity=0.190 Sum_probs=204.6
Q ss_pred hcCCccccccccCCcceEEEEEEcC---------CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCcee--------
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD---------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLAS-------- 463 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~-------- 463 (673)
.++|...+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 3578999999999999999999764 789999998653 36889999999999999988
Q ss_pred -------EeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCC
Q 005859 464 -------LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAE 536 (673)
Q Consensus 464 -------l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~ 536 (673)
+++++... .+..++||||+ +|+|.+++... ....+++..++.++.||+.||+|||++ ||+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQ-DKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN--EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEET-TTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT--TCBCSCCCGG
T ss_pred CccCccchhhccccC-CcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCCHH
Confidence 56666542 46889999999 99999999743 235699999999999999999999998 8999999999
Q ss_pred CeEecCCC--CeeeccccccccccCcchh------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 005859 537 KVLIHRRY--NPLLSDSGLHKLLADDIVF------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSI 608 (673)
Q Consensus 537 NILl~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~ 608 (673)
|||++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 8999999999876543211 112346899999999999989999999999999999999999999
Q ss_pred ChhhHh-hhhccchhhhcC--CcCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 609 TPFTRQ-AAESSKVEDFID--PNLEGK--FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 609 ~~~~~~-~~~~~~~~~~~~--~~~~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
...... ............ +.+... .....+.++.+++.+||+.||++|||+++|++.|++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp GGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 764311 111111111111 011000 011235789999999999999999999999999999875
No 166
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.8e-41 Score=350.06 Aligned_cols=250 Identities=20% Similarity=0.369 Sum_probs=207.5
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.+.|...+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++... +..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEEE
Confidence 346888999999999999999975 58999999998765455567899999999999999999999999654 678999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++++|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 99 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE--KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999862 4589999999999999999999998 899999999999999999999999999987654
Q ss_pred cchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHH
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ......++..|+|||.+.+..++.++||||||+++|||++|+.||.......... .+.....+ ..+...+.
T Consensus 172 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~----~~~~~~~~ 245 (303)
T 3a7i_A 172 TQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-LIPKNNPP----TLEGNYSK 245 (303)
T ss_dssp TBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCC----CCCSSCCH
T ss_pred ccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-HhhcCCCC----CCccccCH
Confidence 321 2234568899999999999999999999999999999999999986543322111 11111111 22233456
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHH
Q 005859 640 NLGQIALHCTHESPSHRPSIENVMQE 665 (673)
Q Consensus 640 ~l~~l~~~Cl~~~p~~RPs~~evl~~ 665 (673)
.+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 246 PLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 79999999999999999999999863
No 167
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4e-41 Score=346.63 Aligned_cols=251 Identities=22% Similarity=0.360 Sum_probs=200.2
Q ss_pred CCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecC--CCCeEEE
Q 005859 403 CFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSK--GRGECFL 478 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~~~l 478 (673)
.|...+.||+|+||.||+|.... +..||+|.+..... ....+.+.+|++++++++||||+++++++... .....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 46777889999999999999764 88999999876542 23346789999999999999999999988642 2356899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec-CCCCeeeccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH-RRYNPLLSDSGLHKLL 557 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~-~~~~~kl~DfGla~~~ 557 (673)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+..++|+||||||+||+++ +++.+||+|||+++..
T Consensus 107 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 9999999999999973 2458999999999999999999999733499999999999998 7889999999999765
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... .....|++.|+|||.+. +.++.++||||||+++|||+||+.||................. .....+...
T Consensus 183 ~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~ 255 (290)
T 1t4h_A 183 RASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---KPASFDKVA 255 (290)
T ss_dssp CTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC---CCGGGGGCC
T ss_pred cccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC---CccccCCCC
Confidence 4432 23456899999999886 4699999999999999999999999865432222111111111 111222233
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 256 IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 467999999999999999999999986
No 168
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.9e-41 Score=355.71 Aligned_cols=255 Identities=18% Similarity=0.270 Sum_probs=192.2
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
..++|...+.||+|+||+||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++... +..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN--HRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET--TEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC--CEEE
Confidence 4568999999999999999999965 5899999999765422 2245678999999999999999999999654 7899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec-----CCCCeeecccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH-----RRYNPLLSDSG 552 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~-----~~~~~kl~DfG 552 (673)
+||||++ |+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++ +++.+||+|||
T Consensus 110 lv~e~~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR--RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC--CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 9999997 599999873 24589999999999999999999998 899999999999994 45569999999
Q ss_pred ccccccCcchhhhhccCCCCCccCCccccCCC-CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCC----
Q 005859 553 LHKLLADDIVFSMLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP---- 627 (673)
Q Consensus 553 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~---- 627 (673)
+++....... ......+|..|+|||++.+.. ++.++|||||||++|||++|+.||..................+
T Consensus 183 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 183 LARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred CccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhh
Confidence 9987653321 233456799999999998754 8999999999999999999999986543322111111110000
Q ss_pred ---------------cCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 628 ---------------NLEGK-----FSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 628 ---------------~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..... .....+.++.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 01113477899999999999999999999986
No 169
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.4e-42 Score=363.99 Aligned_cols=260 Identities=16% Similarity=0.206 Sum_probs=204.6
Q ss_pred ccCHHHHHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccC-----CCCceeE
Q 005859 391 MFNLEEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-----HENLASL 464 (673)
Q Consensus 391 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l 464 (673)
.+++++.....++|.+.+.||+|+||+||+|+.. +++.||||++... ....+.+..|+++++++. ||||+++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 4445555556788999999999999999999975 5899999999643 234467788999999986 9999999
Q ss_pred eeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC--
Q 005859 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR-- 542 (673)
Q Consensus 465 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~-- 542 (673)
++++... +..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ ||+||||||+|||++.
T Consensus 102 ~~~~~~~--~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 102 HGKFMYY--DHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM--SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp EEEEEET--TEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCTT
T ss_pred cceeeEC--CeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCCcccEEEcccc
Confidence 9999664 7899999999 999999997432 23589999999999999999999987 8999999999999975
Q ss_pred -----------------------CCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHH
Q 005859 543 -----------------------RYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVF 599 (673)
Q Consensus 543 -----------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~ 599 (673)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 789999999999865442 23456899999999999999999999999999999
Q ss_pred HHHhCCCCCChhhHhhhhccchhhh--------------------cCC-c----CCCCC----------------CHHHH
Q 005859 600 QILSGKCSITPFTRQAAESSKVEDF--------------------IDP-N----LEGKF----------------SVSEA 638 (673)
Q Consensus 600 el~tG~~p~~~~~~~~~~~~~~~~~--------------------~~~-~----~~~~~----------------~~~~~ 638 (673)
||+||+.||.......... .+... ... . ..... .....
T Consensus 251 ell~g~~pf~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 251 ELYTGSLLFRTHEHMEHLA-MMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp HHHHSSCSCCCSSHHHHHH-HHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred HHHHCCCCCCCCcHHHHHH-HHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 9999999996532211100 00000 000 0 00000 00112
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.+++.+||+.||++|||++|+++
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 56789999999999999999999975
No 170
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.5e-41 Score=346.74 Aligned_cols=251 Identities=20% Similarity=0.331 Sum_probs=201.3
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-----CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCe
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-----SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (673)
++|...+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~ 82 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN--KTD 82 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC--CCe
Confidence 46889999999999999999987 5899999999765322 135789999999999999999999999965 478
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC----Ceeeccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY----NPLLSDS 551 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~----~~kl~Df 551 (673)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++ .+||+||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK--RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 9999999999999999963 34689999999999999999999988 899999999999999877 7999999
Q ss_pred cccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCC
Q 005859 552 GLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631 (673)
Q Consensus 552 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|+++...... ......+++.|+|||.+.+..++.++||||||+++|||+||+.||............... ......
T Consensus 157 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~ 232 (283)
T 3bhy_A 157 GIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV--NYDFDE 232 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCH
T ss_pred ccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhc--ccCCcc
Confidence 9998765432 123446889999999999889999999999999999999999998764332211111100 001110
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 632 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 111223467899999999999999999999986
No 171
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.4e-42 Score=379.25 Aligned_cols=254 Identities=19% Similarity=0.299 Sum_probs=206.8
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++.+... ......+.+|+++|++++|||||++++++.+ .+..+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~--~~~l~ 260 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET--KDALC 260 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee--CCEEE
Confidence 467999999999999999999986 599999999976421 2345678999999999999999999999854 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++... ....+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++..
T Consensus 261 lVmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~--gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE--RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EEECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC--CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999998743 223589999999999999999999998 8999999999999999999999999999877
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..... ....+||+.|+|||++.+..|+.++|||||||++|||++|+.||...............+.. ....++...
T Consensus 337 ~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~--~~~~~p~~~ 412 (576)
T 2acx_A 337 PEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--VPEEYSERF 412 (576)
T ss_dssp CTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH--CCCCCCTTS
T ss_pred ccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc--ccccCCccC
Confidence 54321 23457999999999999989999999999999999999999999754211111111111111 112234445
Q ss_pred HHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRP-----SIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RP-----s~~evl~ 664 (673)
+.++.+++.+||+.||++|| +++||++
T Consensus 413 s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 413 SPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 67899999999999999999 7788864
No 172
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.5e-42 Score=358.50 Aligned_cols=254 Identities=18% Similarity=0.296 Sum_probs=192.7
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+.. +++.||||++...........+.+|++++++++||||+++++++.. .+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT--EKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC--SSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee--CCEEEEEe
Confidence 47889999999999999999976 5899999999765433233356689999999999999999999965 46789999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCc
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 560 (673)
||++ |+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ--KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9997 5999988643 34589999999999999999999988 8999999999999999999999999999865433
Q ss_pred chhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcC-------------
Q 005859 561 IVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID------------- 626 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~------------- 626 (673)
.. ......+|..|+|||++.+ ..++.++|||||||++|||+||+.||..................
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 154 TK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cc-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence 21 2234467999999999876 56899999999999999999999999764332211111110000
Q ss_pred -------CcCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 627 -------PNLEGK----FSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 627 -------~~~~~~----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+..... .....+.++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 01123467899999999999999999999985
No 173
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-41 Score=369.53 Aligned_cols=196 Identities=19% Similarity=0.333 Sum_probs=154.8
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCC---CCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKG---RGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~~~ 476 (673)
++|...+.||+|+||+||+|+.. +++.||||++...... ...+.+.+|+++|++++|||||++++++.... ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57999999999999999999976 5899999999764322 23467899999999999999999999985432 2578
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
|+||||+ +|+|.+++.. ...+++..+..++.||+.||+|||+. |||||||||+|||++.++.+||+|||+++.
T Consensus 133 ~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~--~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA--GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC--CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 9999998 5799999862 35699999999999999999999998 899999999999999999999999999987
Q ss_pred ccCcch--------------------------hhhhccCCCCCccCCcccc-CCCCCcchhHHHHHHHHHHHHhC
Q 005859 557 LADDIV--------------------------FSMLKASAAMGYLAPEYTT-TGRFTEKSDIYAFGMIVFQILSG 604 (673)
Q Consensus 557 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSfGvvl~el~tG 604 (673)
...... ......+||+.|+|||++. ...|+.++|||||||++|||+||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 643211 1233457899999999864 56699999999999999999994
No 174
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=346.29 Aligned_cols=250 Identities=22% Similarity=0.338 Sum_probs=183.4
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|.+.+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 87 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED--SNYVY 87 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC--SSEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc--CCeEE
Confidence 357889999999999999999974 689999999975421 2234678999999999999999999999955 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 88 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH--GILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEEECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT--TEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 999999999999999732 24689999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..... ......+++.|+|||.+.+..++.++||||||+++|||+||+.||........ ........ ...+...
T Consensus 163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~--~~~~~~~ 235 (278)
T 3cok_A 163 KMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----LNKVVLAD--YEMPSFL 235 (278)
T ss_dssp C-----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSSC--CCCCTTS
T ss_pred cCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----HHHHhhcc--cCCcccc
Confidence 53221 12235688999999999988899999999999999999999999865321111 11111111 1123334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+.++.+++.+||+.||++|||++++++
T Consensus 236 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 236 SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 578899999999999999999999975
No 175
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-41 Score=347.81 Aligned_cols=248 Identities=18% Similarity=0.264 Sum_probs=200.2
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 476 (673)
..++|...+.||+|+||+||+|+.. +++.||||++..... .....++.+|+..+.++ +||||+++++++... +..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~--~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED--DHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET--TEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC--CeE
Confidence 3467999999999999999999986 599999999986532 23456789999999999 999999999999654 789
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC-------------
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR------------- 543 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~------------- 543 (673)
++||||+++|+|.+++.........+++..++.++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM--SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEC---------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC--CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 999999999999999975432235689999999999999999999998 89999999999999844
Q ss_pred ------CCeeeccccccccccCcchhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh
Q 005859 544 ------YNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA 616 (673)
Q Consensus 544 ------~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~ 616 (673)
..+||+|||.++...... ...|+..|+|||.+.+. .++.++|||||||++|||++|..++.......
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~- 238 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH- 238 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-
T ss_pred cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-
Confidence 478999999998765432 24589999999999876 56789999999999999999987654332111
Q ss_pred hccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 617 ESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.....+ ..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 239 ---~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 239 ---EIRQGRLP----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---HHHTTCCC----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHcCCCC----CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11111111 223344578999999999999999999999985
No 176
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.4e-41 Score=361.53 Aligned_cols=266 Identities=18% Similarity=0.253 Sum_probs=203.1
Q ss_pred ccCHHHHHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCc----------HHHHHHHHHHHhccCCCC
Q 005859 391 MFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSD----------EGEFLKGLKILTSLKHEN 460 (673)
Q Consensus 391 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~H~n 460 (673)
....+++....++|...+.||+|+||.||+|...+|+.||||++........ .+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 3456888899999999999999999999999988899999999976432211 267899999999999999
Q ss_pred ceeEeeEEecC---CCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCC
Q 005859 461 LASLRGICCSK---GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEK 537 (673)
Q Consensus 461 iv~l~~~~~~~---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~N 537 (673)
|+++++++... .....++||||++ |+|.+++.. ....+++..+..++.||+.||+|||+. ||+||||||+|
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~N 164 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA--GVVHRDLHPGN 164 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGG
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC--cCEecCCChHH
Confidence 99999998653 2346899999997 688888863 234689999999999999999999998 89999999999
Q ss_pred eEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh
Q 005859 538 VLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA 616 (673)
Q Consensus 538 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~ 616 (673)
|+++.++.+||+|||+++...... ......++..|+|||++.+ ..++.++|||||||++|||+||+.||........
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 242 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999999999999998654432 2234568889999999887 6789999999999999999999999975432111
Q ss_pred hccch-------------------hhhcCCcCC---C----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 617 ESSKV-------------------EDFIDPNLE---G----KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 617 ~~~~~-------------------~~~~~~~~~---~----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..... .+....... . ......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 11100 001101100 0 011223567899999999999999999999985
No 177
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=348.70 Aligned_cols=254 Identities=19% Similarity=0.250 Sum_probs=196.0
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCC-cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
++|...+.||+|+||+||+|+... |+.||||++....... ..+.+.+|++++++++||||+++++++... +..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK--RRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC--CeEEEE
Confidence 578899999999999999999865 8999999987653221 245688999999999999999999999654 788999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH--NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC--CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 999999999988763 34589999999999999999999988 899999999999999999999999999987654
Q ss_pred cchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccch-----------------
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV----------------- 621 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~----------------- 621 (673)
... ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||.............
T Consensus 155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 155 PSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred ccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence 322 2234568899999999876 568999999999999999999999986543221111000
Q ss_pred ---hhhcCCcCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 622 ---EDFIDPNLEGKF-----SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 622 ---~~~~~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.....+...... ....+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000000000 0124567899999999999999999999985
No 178
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-41 Score=363.54 Aligned_cols=257 Identities=19% Similarity=0.228 Sum_probs=197.8
Q ss_pred HHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCC----
Q 005859 398 ERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG---- 472 (673)
Q Consensus 398 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 472 (673)
+...++|...+.||+|+||+||+|+.. +|+.||||++..... ...+|+++|++++|||||++++++....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 455678999999999999999999975 589999999865432 2347999999999999999999986532
Q ss_pred --------------------------------CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHH
Q 005859 473 --------------------------------RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520 (673)
Q Consensus 473 --------------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~y 520 (673)
....++||||++ |+|.+.+.........+++..+..++.||++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 234789999997 58888776433334579999999999999999999
Q ss_pred HhcCCCCcccCCcCCCCeEec-CCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCC-CCcchhHHHHHHHH
Q 005859 521 LHGKRPGLVHPNLSAEKVLIH-RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIV 598 (673)
Q Consensus 521 LH~~~~~ivHrDlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGvvl 598 (673)
||+. ||+||||||+|||++ .++.+||+|||+++...... ......+|..|+|||.+.+.. ++.++||||+||++
T Consensus 157 LH~~--gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 157 IHSL--GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHTT--TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHC--cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9987 899999999999998 68899999999998765432 223456789999999988754 89999999999999
Q ss_pred HHHHhCCCCCChhhHhhhhccchh------------------hhcCCcCCC-----CCCHHHHHHHHHHHHHccccCCCC
Q 005859 599 FQILSGKCSITPFTRQAAESSKVE------------------DFIDPNLEG-----KFSVSEASNLGQIALHCTHESPSH 655 (673)
Q Consensus 599 ~el~tG~~p~~~~~~~~~~~~~~~------------------~~~~~~~~~-----~~~~~~~~~l~~l~~~Cl~~~p~~ 655 (673)
|||++|+.||............+. +..-+.... ..+...+.++.+++.+||+.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 999999999975433221111110 000011110 122334577999999999999999
Q ss_pred CCCHHHHHH
Q 005859 656 RPSIENVMQ 664 (673)
Q Consensus 656 RPs~~evl~ 664 (673)
|||+.|+++
T Consensus 313 R~t~~e~l~ 321 (383)
T 3eb0_A 313 RINPYEAMA 321 (383)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHhc
Confidence 999999984
No 179
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.1e-41 Score=357.08 Aligned_cols=256 Identities=16% Similarity=0.276 Sum_probs=201.5
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHH-HhccCCCCceeEeeEEecCCCCeEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKI-LTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
..++|+..+.||+|+||.||+|+.. +|+.||||++..........++..|+.+ ++.++||||+++++++... +..+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~--~~~~ 126 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE--GDVW 126 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS--SCEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC--CcEE
Confidence 3567888999999999999999975 5899999999765433344566667666 7788999999999999654 6789
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++ +|.+++.........+++..+..++.||+.||+|||+.. ||+||||||+|||++.++.+||+|||+++..
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL-SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99999975 999888643223457999999999999999999999732 7999999999999999999999999999877
Q ss_pred cCcchhhhhccCCCCCccCCcccc----CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTT----TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
.... ......||..|+|||++. ...++.++|||||||++|||+||+.||......... +............
T Consensus 205 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~ 279 (340)
T 3an0_A 205 VDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ---LKQVVEEPSPQLP 279 (340)
T ss_dssp SCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH---HHHHHHSCCCCCC
T ss_pred cccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHH---HHHHhcCCCCCCC
Confidence 5432 223357899999999974 346899999999999999999999999753221111 1111111111111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....+.++.+++.+||+.||++|||+.|+++
T Consensus 280 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 280 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 2334678999999999999999999999986
No 180
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.6e-41 Score=387.01 Aligned_cols=261 Identities=22% Similarity=0.371 Sum_probs=209.1
Q ss_pred HHHhcCCccccccccCCcceEEEEEEcC----CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC
Q 005859 398 ERATQCFSEANLLGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR 473 (673)
Q Consensus 398 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (673)
+...++|...+.||+|+||+||+|++.. +..||||.+.........+.|.+|+.++++++||||+++++++.+
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--- 462 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--- 462 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence 3345778999999999999999999753 567999998765433344789999999999999999999999843
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK--RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC--CccccccchHhEEEeCCCCEEEEecCC
Confidence 4579999999999999999742 23589999999999999999999998 899999999999999999999999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCCC
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGK 632 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
++..............+++.|+|||.+.+..++.++|||||||++|||++ |..||........... +..... ..
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~-i~~~~~----~~ 612 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGER----LP 612 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-HHHTCC----CC
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHcCCC----CC
Confidence 98776544333344557789999999998899999999999999999997 9999876433222111 111111 12
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 633 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.+...+..+.+++.+||+.||++|||+.|+++.|+++++
T Consensus 613 ~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 613 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 334456789999999999999999999999999999864
No 181
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=9.3e-42 Score=359.56 Aligned_cols=249 Identities=20% Similarity=0.327 Sum_probs=198.5
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|...+.||+|+||+||+|+.+ +|+.||||++.+... .+.+|++++.++ +||||+++++++.+ .+..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDD--GKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEEC--SSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEc--CCEEEE
Confidence 467999999999999999999976 489999999976531 245788889888 79999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC-C---Ceeecccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR-Y---NPLLSDSGLH 554 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~-~---~~kl~DfGla 554 (673)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||+.++ + .+||+|||++
T Consensus 94 v~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~--givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 94 VTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ--GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp EECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 9999999999999863 34689999999999999999999998 89999999999998543 2 4999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcC--CcCCCC
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID--PNLEGK 632 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~ 632 (673)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+.. ......
T Consensus 168 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~i~~~~~~~~~~ 245 (342)
T 2qr7_A 168 KQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-PEEILARIGSGKFSLSGG 245 (342)
T ss_dssp EECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-HHHHHHHHHHCCCCCCST
T ss_pred ccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-HHHHHHHHccCCcccCcc
Confidence 87654322 2234578999999999988789999999999999999999999996431110 0011111111 112222
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 633 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 246 YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 33445678999999999999999999999875
No 182
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.5e-41 Score=352.64 Aligned_cols=252 Identities=18% Similarity=0.305 Sum_probs=194.3
Q ss_pred cCCccc-cccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEA-NLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~l 478 (673)
+.|.+. +.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++.++ +||||+++++++... +..++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~--~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE--DRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC--CEEEE
Confidence 456663 78999999999999965 58999999997653 34567899999999995 799999999999654 78999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC---eeeccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN---PLLSDSGLHK 555 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~---~kl~DfGla~ 555 (673)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++. +||+|||+++
T Consensus 89 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC--CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 99999999999999732 4589999999999999999999998 8999999999999998776 9999999987
Q ss_pred cccCcch------hhhhccCCCCCccCCccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh--------
Q 005859 556 LLADDIV------FSMLKASAAMGYLAPEYTTT-----GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA-------- 616 (673)
Q Consensus 556 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~-------- 616 (673)
....... .......||..|+|||++.. ..++.++|||||||++|||+||+.||........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6542211 11223458999999999875 4589999999999999999999999865321100
Q ss_pred ---hccchhhhcCCcCCCCCCH----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 617 ---ESSKVEDFIDPNLEGKFSV----SEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 617 ---~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.......+..... .++. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0000111111111 1121 23568999999999999999999999986
No 183
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1e-40 Score=353.41 Aligned_cols=257 Identities=22% Similarity=0.296 Sum_probs=198.7
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCC------C
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKG------R 473 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 473 (673)
++|...+.||+|+||+||+|+.. +|+.||||++...... .....+.+|++++++++||||+++++++.... .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57899999999999999999985 5899999998765432 23467889999999999999999999987643 3
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC--CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 568999999974 787777532 24589999999999999999999998 899999999999999999999999999
Q ss_pred cccccCcc---hhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh--hhcCC
Q 005859 554 HKLLADDI---VFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE--DFIDP 627 (673)
Q Consensus 554 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~--~~~~~ 627 (673)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.............. ....+
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 98764321 112234568999999999876 4589999999999999999999999875432211110000 00000
Q ss_pred cCC-----------------CCCCH-H------HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 628 NLE-----------------GKFSV-S------EASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 628 ~~~-----------------~~~~~-~------~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
... ..... . .+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000 00000 0 1356889999999999999999999985
No 184
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5e-41 Score=344.86 Aligned_cols=246 Identities=18% Similarity=0.335 Sum_probs=203.8
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|...+.||+|+||.||+|+... ++.||||++..... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 91 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYL 91 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc--CCEEEE
Confidence 578899999999999999999764 78999999865421 2234678999999999999999999999965 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHER--KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999999732 4589999999999999999999987 89999999999999999999999999987654
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... .....|+..|+|||.+.+..++.++||||||+++|||++|+.||........... +.... ..++...+
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~~~--~~~~~~~~ 236 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR----IVNVD--LKFPPFLS 236 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHTTC--CCCCTTSC
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH----Hhccc--cCCCCcCC
Confidence 321 2335688999999999998999999999999999999999999875433222111 11111 12233445
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 237 DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 78899999999999999999999985
No 185
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=354.02 Aligned_cols=260 Identities=17% Similarity=0.270 Sum_probs=190.2
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CCCceeEeeEEec------CC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HENLASLRGICCS------KG 472 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~------~~ 472 (673)
..+|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++++. ||||+++++++.. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 457899999999999999999975 58999999986543 334567899999999996 9999999999853 22
Q ss_pred CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccc
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSG 552 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfG 552 (673)
....++||||+. |+|.+++.... ....+++..++.++.||+.||+|||+..++|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred CceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 346899999995 79999886432 2346999999999999999999999983349999999999999999999999999
Q ss_pred ccccccCcchh-----------hhhccCCCCCccCCccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhc
Q 005859 553 LHKLLADDIVF-----------SMLKASAAMGYLAPEYT---TTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618 (673)
Q Consensus 553 la~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~ 618 (673)
+++........ ......+++.|+|||++ .+..++.++|||||||++|||+||+.||........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-- 261 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI-- 261 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh--
Confidence 99876543211 11134588999999998 466789999999999999999999999865432211
Q ss_pred cchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 619 SKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
...... .......+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 262 --~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 262 --VNGKYS----IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ------CC----CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --hcCccc----CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111111 11112223558899999999999999999999999998864
No 186
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-41 Score=355.27 Aligned_cols=258 Identities=19% Similarity=0.236 Sum_probs=195.0
Q ss_pred HHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC----cHHHHHHHHHHHhccCCCCceeEeeEEecCC
Q 005859 398 ERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS----DEGEFLKGLKILTSLKHENLASLRGICCSKG 472 (673)
Q Consensus 398 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 472 (673)
....++|...+.||+|+||.||+|+.. +|+.||||++....... ..+.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 83 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-- 83 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC--
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee--
Confidence 344578999999999999999999976 48999999997543211 12478899999999999999999999954
Q ss_pred CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccc
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSG 552 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfG 552 (673)
.+..++||||+++ +|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||
T Consensus 84 ~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (346)
T 1ua2_A 84 KSNISLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH--WILHRDLKPNNLLLDENGVLKLADFG 157 (346)
T ss_dssp TTCCEEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTCCEEECCCG
T ss_pred CCceEEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC--CEECCCCCHHHEEEcCCCCEEEEecc
Confidence 4678999999975 898888632 34588899999999999999999998 89999999999999999999999999
Q ss_pred ccccccCcchhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcC--
Q 005859 553 LHKLLADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNL-- 629 (673)
Q Consensus 553 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~-- 629 (673)
+++....... ......+|+.|+|||.+.+. .++.++|||||||++|||++|..||............+.....+..
T Consensus 158 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 158 LAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 236 (346)
T ss_dssp GGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhh
Confidence 9987654321 23345689999999999764 4899999999999999999999888654332221111111100000
Q ss_pred ---------------CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 630 ---------------EGKFS-----VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 630 ---------------~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....+ ...+.++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00001 233578999999999999999999999986
No 187
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=352.73 Aligned_cols=260 Identities=20% Similarity=0.334 Sum_probs=201.9
Q ss_pred HHHHHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecC
Q 005859 394 LEEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSK 471 (673)
Q Consensus 394 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 471 (673)
+.++....++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+|+++++++ +||||+++++++...
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3344456778999999999999999999975 58999999987543 3456899999999999 899999999999764
Q ss_pred C----CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCee
Q 005859 472 G----RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPL 547 (673)
Q Consensus 472 ~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~k 547 (673)
. .+..++||||+++|+|.+++... ....+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+|
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH--KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEECTTCCEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCcHHHEEEcCCCCEE
Confidence 3 46789999999999999999743 234689999999999999999999998 899999999999999999999
Q ss_pred eccccccccccCcchhhhhccCCCCCccCCcccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh
Q 005859 548 LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTT-----TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622 (673)
Q Consensus 548 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~ 622 (673)
|+|||+++....... ......|+..|+|||++. +..++.++|||||||++|||+||+.||........... +.
T Consensus 170 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~ 247 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-IP 247 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HH
T ss_pred EeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-hh
Confidence 999999987653221 123346899999999987 55689999999999999999999999865433221111 11
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 DFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....+. ......+..+.+++.+||+.||++||++.++++
T Consensus 248 ~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RNPAPR---LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSCCCC---CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCcccc---CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111 112234578999999999999999999999986
No 188
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.4e-41 Score=346.36 Aligned_cols=249 Identities=18% Similarity=0.277 Sum_probs=204.6
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCC--CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCK--SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|...+.||+|+||.||+|+..+ ++.||+|++...... ...+.+.+|++++++++||||+++++++.. .+..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 91 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVF 91 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc--CCEEE
Confidence 3578889999999999999999875 889999998765322 234678899999999999999999999955 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 92 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 92 VVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 99999999999998863 24689999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..... ......++..|+|||.+.+..++.++||||||+++|||+||+.||.......... .+.... ...+...
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~--~~~~~~~ 238 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----RIKKNE--YSIPKHI 238 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHTTC--CCCCTTS
T ss_pred ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHhhcc--CCCcccc
Confidence 53221 2233568999999999998889999999999999999999999987643322111 111111 1122334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 239 NPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 567899999999999999999999986
No 189
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.7e-41 Score=369.29 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=202.7
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|.+.+.||+|+||+||+|+.. +++.||||++..... ......+.+|++++++++||||+++++++.. .+..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED--SSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc--CCEEEE
Confidence 356899999999999999999976 589999999965432 3456789999999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec---CCCCeeeccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLHK 555 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~---~~~~~kl~DfGla~ 555 (673)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++ .++.+||+|||+++
T Consensus 99 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 9999999999998863 24689999999999999999999998 899999999999995 45679999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||................. ........
T Consensus 173 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~ 247 (486)
T 3mwu_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY--AFDLPQWR 247 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCSGGGG
T ss_pred ECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCcccC
Confidence 765442 2334578999999999875 599999999999999999999999976433222111111111 11111123
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 248 TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp GSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 44678999999999999999999999986
No 190
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.9e-41 Score=347.45 Aligned_cols=255 Identities=16% Similarity=0.245 Sum_probs=187.6
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHH-HHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGE-FLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|+..+.||+|+||+||+|+.. +|+.||||++..........+ +.++...++.++||||+++++++... +..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~--~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE--GDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--SSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc--CCEEE
Confidence 467899999999999999999975 589999999976543222333 44455568888999999999999654 67899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||++ |+|.+++.........+++..+..++.|++.||+|||++. ||+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL-SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS-CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999997 5888887643333457999999999999999999999842 79999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 559 DDIVFSMLKASAAMGYLAPEYT----TTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.... .....|++.|+|||++ .+..++.++||||||+++|||+||+.||.......... .............
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~ 236 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---KQVVEEPSPQLPA 236 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH---HHHHHSCCCCCCT
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH---HHHhccCCCCccc
Confidence 4322 2234689999999996 45668999999999999999999999997532221111 1111111111122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 334578999999999999999999999986
No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.8e-41 Score=371.08 Aligned_cols=251 Identities=22% Similarity=0.336 Sum_probs=205.3
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~ 102 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFY 102 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCEEE
Confidence 357889999999999999999976 589999999976532 3456789999999999999999999999955 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe---cCCCCeeecccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLH 554 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl---~~~~~~kl~DfGla 554 (673)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||+ +.++.+||+|||++
T Consensus 103 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 99999999999998863 34689999999999999999999998 89999999999999 56789999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
+...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.................. ......
T Consensus 177 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~ 251 (484)
T 3nyv_A 177 THFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQW 251 (484)
T ss_dssp HHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGG
T ss_pred EEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCccc
Confidence 8765543 2334568999999999875 6999999999999999999999999765433222111111111 111122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 345678999999999999999999999985
No 192
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.8e-42 Score=369.08 Aligned_cols=246 Identities=15% Similarity=0.197 Sum_probs=190.6
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHH---HHHhccCCCCceeEe-------eE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGL---KILTSLKHENLASLR-------GI 467 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~ 467 (673)
.++|...+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467888999999999999999964 599999999975432 23347789999 566666899999998 55
Q ss_pred EecCCC----------C-----eEEEEEeecCCCChhhhhccccC---CccccCHHHHHHHHHHHHHHHHHHhcCCCCcc
Q 005859 468 CCSKGR----------G-----ECFLIYDFVPNGNLLQHLDLEAG---SEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529 (673)
Q Consensus 468 ~~~~~~----------~-----~~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~iv 529 (673)
+...+. + ..++||||+ +|+|.+++..... ....+++..++.|+.||+.||+|||++ ||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~iv 228 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY--GLV 228 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT--TEE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC--Cee
Confidence 533211 1 278999999 6899999974311 123456788999999999999999998 899
Q ss_pred cCCcCCCCeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCC-----------CCCcchhHHHHHHHH
Q 005859 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG-----------RFTEKSDIYAFGMIV 598 (673)
Q Consensus 530 HrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~ksDVwSfGvvl 598 (673)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++.+. .++.++|||||||++
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTCE----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCCc----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999864432 233456 899999999877 799999999999999
Q ss_pred HHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 599 FQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 599 ~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
|||+||+.||........ ...+.. . ....+.++.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~----~~~~~~-~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGG----SEWIFR-S-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CC----SGGGGS-S-----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccc----hhhhhh-h-----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999865432211 111111 1 1123467899999999999999999999985
No 193
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.8e-41 Score=346.76 Aligned_cols=259 Identities=21% Similarity=0.333 Sum_probs=198.7
Q ss_pred hcCCccccccccCCcceEEEEEEcC--Cc--EEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD--GS--VVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (673)
.++|+..+.||+|+||.||+|++.. ++ .||||++..... ....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 3578899999999999999998642 33 699999876532 22346789999999999999999999998643
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 94 PMKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp SCEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred CceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC--CcccCCCchheEEEcCCCCEEEcccccc
Confidence 378999999999999999743 24589999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCcch--hhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCcCCC
Q 005859 555 KLLADDIV--FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEG 631 (673)
Q Consensus 555 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
+....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.......... .+.......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----~~~~~~~~~ 244 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH----KIDKEGERL 244 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHTSCCCC
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH----HHHccCCCC
Confidence 87654321 11223456778999999988889999999999999999999 999987653322211 111111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 632 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+...+.++.+++.+||+.||++|||+.++++.|+++..
T Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 2233456789999999999999999999999999998754
No 194
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.1e-41 Score=352.19 Aligned_cols=257 Identities=19% Similarity=0.290 Sum_probs=203.3
Q ss_pred HHHhcCCccc-cccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCC
Q 005859 398 ERATQCFSEA-NLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSL-KHENLASLRGICCSKGR 473 (673)
Q Consensus 398 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 473 (673)
+...++|.+. +.||+|+||.||+|+.. +++.||||++..... ......+.+|+++++++ +||||+++++++.. .
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~--~ 101 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN--T 101 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--S
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe--C
Confidence 3445567666 78999999999999976 489999999976532 23357899999999999 56999999999954 4
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC---CCCeeecc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR---RYNPLLSD 550 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~---~~~~kl~D 550 (673)
+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. ||+||||||+||+++. ++.+||+|
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~--givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN--NIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC--CeecCcCChHHEEEecCCCCCcEEEee
Confidence 7899999999999999998632 235689999999999999999999998 8999999999999998 78999999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCC
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLE 630 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
||+++...... ......|++.|+|||++.+..++.++|||||||++|||+||+.||............... .....
T Consensus 178 fg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~~~~~ 253 (327)
T 3lm5_A 178 FGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV--NVDYS 253 (327)
T ss_dssp GGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCC
T ss_pred CccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhc--ccccC
Confidence 99998765432 223456899999999999999999999999999999999999999764433222111111 11112
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 631 GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 631 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 2223345678999999999999999999999975
No 195
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.4e-41 Score=353.25 Aligned_cols=249 Identities=18% Similarity=0.282 Sum_probs=204.8
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCC--CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCK--SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
.++|...+.||+|+||.||+++..+ ++.||+|++...... ...+.+.+|++++++++||||+++++++.+ .+..+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 117 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVF 117 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec--CCeEE
Confidence 4678899999999999999999765 889999998765322 234678999999999999999999999965 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 118 lv~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 118 VVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 99999999999998863 24689999999999999999999998 8999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..... ......|+..|+|||++.+..++.++||||||+++|||+||+.||............... .. ..+...
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~----~~~~~~ 264 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY----SIPKHI 264 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CC----CCCTTS
T ss_pred ccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CC----CCCccC
Confidence 53221 223456899999999999888999999999999999999999998754322211111111 11 122334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+..+.+++.+||+.||++|||+.|+++
T Consensus 265 ~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 265 NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 567899999999999999999999986
No 196
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-40 Score=369.44 Aligned_cols=251 Identities=20% Similarity=0.315 Sum_probs=198.6
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|...+.||+|+||+||+|+.. ++..||||++..... ......+.+|++++++++|||||++++++.. .+..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED--KRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEEE
Confidence 346899999999999999999976 588999999976542 2345689999999999999999999999954 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC---CCeeeccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPLLSDSGLHK 555 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~---~~~kl~DfGla~ 555 (673)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.. +.+||+|||+++
T Consensus 114 v~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH--NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 9999999999998863 24589999999999999999999988 89999999999999764 459999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
...... ......||+.|+|||++. +.++.++||||+||++|||++|+.||................. ........
T Consensus 188 ~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~ 262 (494)
T 3lij_A 188 VFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY--TFDSPEWK 262 (494)
T ss_dssp ECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCSGGGT
T ss_pred ECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCchhcc
Confidence 765432 233457999999999886 5699999999999999999999999976543322211111111 11111112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 636 SEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+..+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 263 NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 34578999999999999999999999984
No 197
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.2e-40 Score=349.62 Aligned_cols=248 Identities=16% Similarity=0.201 Sum_probs=199.3
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CCCceeEeeEEecCCCCeEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~lv 479 (673)
++|...+.||+|+||+||+|+.. +++.||||++.. ...+.+.+|++++++++ ||||+++++++........++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 57899999999999999999864 589999999864 34578999999999997 9999999999977556788999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC-Ceeecccccccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY-NPLLSDSGLHKLLA 558 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~-~~kl~DfGla~~~~ 558 (673)
|||+++++|.+++. .+++..+..++.|++.||+|||+. ||+||||||+|||++.++ .+||+|||+++...
T Consensus 112 ~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM--GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC--CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999999884 388999999999999999999988 899999999999999776 89999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhcc---------ch-------
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS---------KV------- 621 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~---------~~------- 621 (673)
.... .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||........... ..
T Consensus 183 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 183 PGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 4322 234568889999999987 6689999999999999999999999843211100000 00
Q ss_pred --------hhhcCC--------cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 622 --------EDFIDP--------NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 622 --------~~~~~~--------~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.... ..........+.++.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 0011112224678999999999999999999999986
No 198
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-41 Score=356.53 Aligned_cols=252 Identities=17% Similarity=0.298 Sum_probs=194.8
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCC----C
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGR----G 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~ 474 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++..... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 457899999999999999999975 5999999999654322 224678899999999999999999999865421 3
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
..|+||||+ +++|.+++.. ..+++..+..++.||++||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC--CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 569999999 8899999863 3589999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh-----------
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE----------- 622 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~----------- 622 (673)
+..... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 176 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 176 RQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp EECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 876542 234578999999999887 6799999999999999999999999975432211110000
Q ss_pred --------hhcC--CcCC----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 --------DFID--PNLE----GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 --------~~~~--~~~~----~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.++. +... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000 0000 0112234578999999999999999999999986
No 199
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.2e-40 Score=354.61 Aligned_cols=258 Identities=21% Similarity=0.313 Sum_probs=205.0
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCc-------HHHHHHHHHHHhcc-CCCCceeEe
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSD-------EGEFLKGLKILTSL-KHENLASLR 465 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l-~H~niv~l~ 465 (673)
+......++|...+.||+|+||.||+|+.. +|+.||||++........ .+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334555678999999999999999999986 599999999876542111 34678999999999 899999999
Q ss_pred eEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC
Q 005859 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545 (673)
Q Consensus 466 ~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~ 545 (673)
+++.. .+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.
T Consensus 167 ~~~~~--~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~--gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 167 DSYES--SSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN--NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEB--SSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCC
T ss_pred EEEee--CCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEECCCCC
Confidence 99855 4789999999999999999973 24689999999999999999999987 8999999999999999999
Q ss_pred eeeccccccccccCcchhhhhccCCCCCccCCccccC------CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhcc
Q 005859 546 PLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTT------GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619 (673)
Q Consensus 546 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~ 619 (673)
+||+|||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........
T Consensus 239 ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 316 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316 (365)
T ss_dssp EEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9999999998765432 2234578999999999863 3589999999999999999999999865432221111
Q ss_pred chhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....... .........+..+.+++.+||+.||++|||+.|+++
T Consensus 317 i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 317 IMEGQYQ--FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHTCCC--CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhCCCC--CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111000 000000123467899999999999999999999986
No 200
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=342.66 Aligned_cols=252 Identities=22% Similarity=0.303 Sum_probs=198.2
Q ss_pred CCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEEEe
Q 005859 403 CFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv~E 481 (673)
.|.....||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++... +..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN--GFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC--CcEEEEEE
Confidence 3555668999999999999975 48899999997653 34457899999999999999999999999654 68899999
Q ss_pred ecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC-CCCeeeccccccccccCc
Q 005859 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR-RYNPLLSDSGLHKLLADD 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~-~~~~kl~DfGla~~~~~~ 560 (673)
|+++++|.+++.... ....+++..+..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN--QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC--CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999997432 223567899999999999999999987 8999999999999987 899999999999876542
Q ss_pred chhhhhccCCCCCccCCccccCCC--CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 561 IVFSMLKASAAMGYLAPEYTTTGR--FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 561 ~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. ......|+..|+|||.+.+.. ++.++||||||+++|||+||+.||............... .......+...+
T Consensus 177 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 252 (295)
T 2clq_A 177 NP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM---FKVHPEIPESMS 252 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH---HCCCCCCCTTSC
T ss_pred CC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc---ccccccccccCC
Confidence 21 123456889999999987643 899999999999999999999998654222111100000 011122334456
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.++.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 253 AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 78999999999999999999999985
No 201
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.1e-40 Score=340.50 Aligned_cols=248 Identities=19% Similarity=0.319 Sum_probs=195.7
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|.+.+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 88 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST--PTDFFM 88 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec--CCeEEE
Confidence 57888999999999999999986 589999999875421 2335678999999999999999999999855 478999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++...
T Consensus 89 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRH--MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH--CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999999999999632 4589999999999999999999987 79999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... .....+++.|+|||.+.+..+ +.++||||||+++|||++|+.||............ ... . ...+...
T Consensus 163 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~---~--~~~~~~~ 234 (276)
T 2h6d_A 163 DGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGG---V--FYIPEYL 234 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HHC---C--CCCCTTS
T ss_pred CCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh-hcC---c--ccCchhc
Confidence 4322 223468899999999987765 68999999999999999999998654322211111 110 0 1122334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005859 638 ASNLGQIALHCTHESPSHRPSIENVMQE 665 (673)
Q Consensus 638 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~ 665 (673)
+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 235 NRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 5778999999999999999999999863
No 202
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.8e-41 Score=353.77 Aligned_cols=254 Identities=21% Similarity=0.336 Sum_probs=196.8
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCC-cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
++|...+.||+|+||.||+|+... |+.||||++....... ..+.+.+|++++++++||||+++++++... +..++|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 102 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK--KRWYLV 102 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC--CEEEEE
Confidence 578889999999999999999865 8999999987654222 235678999999999999999999999654 788999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSH--NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC--CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 999999999887652 24589999999999999999999998 899999999999999999999999999987654
Q ss_pred cchhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccc------------------
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSK------------------ 620 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~------------------ 620 (673)
... ......++..|+|||++.+. .++.++|||||||++|||+||+.||............
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 321 22345689999999999875 6899999999999999999999998654322111100
Q ss_pred --hhhhcCCcCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 621 --VEDFIDPNLEGKFS-----VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 621 --~~~~~~~~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
......+......+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00111111111111 124578999999999999999999999875
No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.9e-41 Score=382.47 Aligned_cols=249 Identities=19% Similarity=0.275 Sum_probs=205.6
Q ss_pred HhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccC--CCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCe
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTS--CKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGE 475 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 475 (673)
..++|...+.||+|+||+||+|+... ++.||||++.+.. .....+.+..|.+++..+ +||||+++++++. +.+.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~--~~~~ 416 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--TMDR 416 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB--CSSE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE--eCCE
Confidence 45689999999999999999999764 8899999997642 123456788999999998 7999999999884 4578
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.|+||||+++|+|.+++... ..+++..++.|+.||+.||+|||+. |||||||||+||||+.++.+||+|||+++
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~--gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK--GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT--SEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC--CeEeccCChhhEEEcCCCcEEEeecceee
Confidence 99999999999999999732 4589999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCH
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
....... .....+||+.|+|||++.+..|+.++|||||||++|||+||+.||........... +.... ..++.
T Consensus 491 ~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~----i~~~~--~~~p~ 563 (674)
T 3pfq_A 491 ENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEHN--VAYPK 563 (674)
T ss_dssp ECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHSSC--CCCCT
T ss_pred ccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH----HHhCC--CCCCc
Confidence 6433221 23446799999999999999999999999999999999999999976543322222 22211 12344
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH-----HHHH
Q 005859 636 SEASNLGQIALHCTHESPSHRPSI-----ENVM 663 (673)
Q Consensus 636 ~~~~~l~~l~~~Cl~~~p~~RPs~-----~evl 663 (673)
..+.++.+|+.+||+.||++||++ +||+
T Consensus 564 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 564 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 556789999999999999999997 6665
No 204
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2e-41 Score=350.76 Aligned_cols=261 Identities=18% Similarity=0.341 Sum_probs=186.0
Q ss_pred HHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 399 RATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 399 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
...++|...+.||+|+||.||+|+.. +++.||||++.........+++.+|++++++++||||+++++++... +..+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 89 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--DELW 89 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESS--SCEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec--CCcE
Confidence 34568999999999999999999965 58999999987654344456789999999999999999999999654 6789
Q ss_pred EEEeecCCCChhhhhcccc----CCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEA----GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+||||+++|+|.+++.... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN--GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC--CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999986321 1234589999999999999999999987 899999999999999999999999999
Q ss_pred cccccCcch----hhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCc
Q 005859 554 HKLLADDIV----FSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628 (673)
Q Consensus 554 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~ 628 (673)
++....... .......|++.|+|||.+.+ ..++.++||||||+++|||+||+.||................ .+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~ 246 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND-PPS 246 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSS-CCC
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccC-CCc
Confidence 986643221 11223468899999999875 568999999999999999999999987643321111111100 000
Q ss_pred C-----CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 629 L-----EGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 629 ~-----~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ........+.++.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 01112234567899999999999999999999985
No 205
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-41 Score=362.55 Aligned_cols=254 Identities=13% Similarity=0.061 Sum_probs=182.8
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC--CcHHHHHHHHHHHhcc--CCCCceeEe-------eEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK--SDEGEFLKGLKILTSL--KHENLASLR-------GIC 468 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~ 468 (673)
..+|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999976 5899999999875421 2235677785444444 699988755 444
Q ss_pred ecCCC---------------CeEEEEEeecCCCChhhhhccccCCccccCHHHH------HHHHHHHHHHHHHHhcCCCC
Q 005859 469 CSKGR---------------GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATR------ISVIKGIAKGISYLHGKRPG 527 (673)
Q Consensus 469 ~~~~~---------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~ 527 (673)
..... ...++||||++ |+|.+++... ...+++..+ ..++.||+.||+|||++ |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK--G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC--C
Confidence 32221 34799999998 8999999743 223455556 78889999999999988 8
Q ss_pred cccCCcCCCCeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccC--CCCCcchhHHHHHHHHHHHHhCC
Q 005859 528 LVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTT--GRFTEKSDIYAFGMIVFQILSGK 605 (673)
Q Consensus 528 ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGvvl~el~tG~ 605 (673)
|+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998765432 13446699999999987 67999999999999999999999
Q ss_pred CCCChhhHhhhhccc---hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 606 CSITPFTRQAAESSK---VEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 606 ~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.||............ .................+..+.+++.+||+.||++|||+.|+++
T Consensus 291 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999764322111000 00001111111112245678999999999999999999999974
No 206
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.6e-40 Score=343.73 Aligned_cols=253 Identities=20% Similarity=0.348 Sum_probs=196.9
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecC--------
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSK-------- 471 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 471 (673)
.++|+..+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 457899999999999999999975 5899999999653 23446789999999999999999999988653
Q ss_pred ---CCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeee
Q 005859 472 ---GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548 (673)
Q Consensus 472 ---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl 548 (673)
..+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ--GIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTSCEEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC--CeecccCCHHhEEEcCCCCEEE
Confidence 235789999999999999999742 24578899999999999999999998 8999999999999999999999
Q ss_pred ccccccccccCcc-------------hhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHh
Q 005859 549 SDSGLHKLLADDI-------------VFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQ 614 (673)
Q Consensus 549 ~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~ 614 (673)
+|||+++...... ........|+..|+|||.+.+. .++.++|||||||++|||++ ||......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~ 234 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH
Confidence 9999998664321 1112344688999999999864 68999999999999999998 55433222
Q ss_pred hhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 615 AAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
......+.. ........++...+..+.+++.+||+.||++|||+.++++
T Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 VNILKKLRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111111 1122333445556678899999999999999999999986
No 207
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.7e-40 Score=354.43 Aligned_cols=253 Identities=16% Similarity=0.255 Sum_probs=191.6
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCC----CC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKG----RG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~ 474 (673)
.++|...+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|+++++.++||||+++++++.... ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357899999999999999999976 4899999999764322 23457889999999999999999999986542 13
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
..++||||++ |+|.+++. ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred ceEEEEEcCC-CCHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC--CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 7899999996 57888875 2488999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh----------
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF---------- 624 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~---------- 624 (673)
+...... ......||..|+|||++.+..++.++|||||||++|||+||+.||............+...
T Consensus 175 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 175 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 8765432 2234568999999999999899999999999999999999999997543321111110000
Q ss_pred --------c--CCcCC-------------C---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 625 --------I--DPNLE-------------G---KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 625 --------~--~~~~~-------------~---~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. .+... + ......+.++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 00000 0 001223678999999999999999999999986
No 208
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=9.2e-41 Score=345.88 Aligned_cols=252 Identities=17% Similarity=0.282 Sum_probs=198.9
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|+... ++.||+|++.... ....+.+.+|++++++++||||+++++++... +..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHD--GKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC--CeEEEE
Confidence 4678999999999999999999874 8999999987653 34567899999999999999999999999654 678999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK--RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC--CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999988642 24589999999999999999999998 899999999999999999999999999764332
Q ss_pred cchhhhhccCCCCCccCCccc-----cCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 560 DIVFSMLKASAAMGYLAPEYT-----TTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.. .......|+..|+|||++ ....++.++||||||+++|||+||+.||.............. ...+ ....+
T Consensus 170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~--~~~~~ 245 (302)
T 2j7t_A 170 TL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK-SDPP--TLLTP 245 (302)
T ss_dssp HH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCC--CCSSG
T ss_pred cc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhc-cCCc--ccCCc
Confidence 11 112234688999999998 356789999999999999999999999876433222111111 1111 11123
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+..+.+++.+||+.||++|||+.++++
T Consensus 246 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 246 SKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 344578999999999999999999999975
No 209
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-40 Score=370.39 Aligned_cols=251 Identities=19% Similarity=0.307 Sum_probs=199.8
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCC------------CcHHHHHHHHHHHhccCCCCceeEeeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCK------------SDEGEFLKGLKILTSLKHENLASLRGI 467 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~H~niv~l~~~ 467 (673)
.++|.+.+.||+|+||+||+|+... ++.||||++...... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5679999999999999999999764 889999999765322 234678999999999999999999999
Q ss_pred EecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC---
Q 005859 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY--- 544 (673)
Q Consensus 468 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~--- 544 (673)
+.. .+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++
T Consensus 115 ~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 115 FED--KKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH--NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEC--SSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESSTTCCS
T ss_pred EEc--CCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeEeCCCcHHHEEEecCCCCc
Confidence 954 4789999999999999999863 24589999999999999999999998 899999999999998776
Q ss_pred CeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh
Q 005859 545 NPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF 624 (673)
Q Consensus 545 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~ 624 (673)
.+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|||++|+.||................
T Consensus 187 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~ 263 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGK 263 (504)
T ss_dssp SEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred cEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence 69999999998765432 233457899999999986 469999999999999999999999997654332211111110
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.. .........+.++.+++.+||+.||.+|||+.|+++
T Consensus 264 ~~--~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 264 YY--FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CC--CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC--CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 000001123578999999999999999999999985
No 210
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.4e-41 Score=364.41 Aligned_cols=201 Identities=18% Similarity=0.304 Sum_probs=166.3
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC---Ce
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGR---GE 475 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---~~ 475 (673)
.++|...+.||+|+||.||+|+... ++.||||++..... ....+.+.+|+++|++++||||+++++++..... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 3579999999999999999999764 88999999976432 2234678999999999999999999999865432 56
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.|+||||++ |+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~--givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES--GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 899999996 699999963 34699999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcchh---------------------hhhccCCCCCccCCcccc-CCCCCcchhHHHHHHHHHHHHhCCCCC
Q 005859 556 LLADDIVF---------------------SMLKASAAMGYLAPEYTT-TGRFTEKSDIYAFGMIVFQILSGKCSI 608 (673)
Q Consensus 556 ~~~~~~~~---------------------~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSfGvvl~el~tG~~p~ 608 (673)
........ .....+||..|+|||++. ...++.++||||+||++|||++|..||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 76543211 134567899999999864 556999999999999999999865544
No 211
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=344.44 Aligned_cols=251 Identities=20% Similarity=0.346 Sum_probs=200.5
Q ss_pred HhcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
..++|+..+.||+|+||.||+|+... |+.||||.+... ...+.+.+|++++++++||||+++++++... +..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHVVKYYGSYFKN--TDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT---SCCHHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch---HHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--CEEEE
Confidence 45679999999999999999999764 899999999764 2456799999999999999999999999654 67899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++...
T Consensus 102 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM--RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC--CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999998632 24689999999999999999999987 89999999999999999999999999998765
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA 638 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.... ......++..|+|||.+.+..++.++||||||+++|||++|+.||.......... .......+. ...+...+
T Consensus 177 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~ 252 (314)
T 3com_A 177 DTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPTNPPPT--FRKPELWS 252 (314)
T ss_dssp TTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCC--CSSGGGSC
T ss_pred hhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcCCCcc--cCCcccCC
Confidence 4321 2234568899999999999899999999999999999999999987543221111 111111111 11233345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 639 SNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 639 ~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..+.+++.+||+.||++|||+.++++
T Consensus 253 ~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 253 DNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 78999999999999999999999975
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.2e-40 Score=340.45 Aligned_cols=255 Identities=17% Similarity=0.310 Sum_probs=199.0
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~lv 479 (673)
++|+..+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++||||+++++++... +..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE--NKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC--CceEEE
Confidence 57888999999999999999976 589999999876432 22346789999999999999999999999654 789999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccC
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD 559 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 559 (673)
|||++ |+|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99997 69999987432 24588999999999999999999998 899999999999999999999999999987653
Q ss_pred cchhhhhccCCCCCccCCccccCCC-CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhc-------------
Q 005859 560 DIVFSMLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI------------- 625 (673)
Q Consensus 560 ~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~------------- 625 (673)
... ......++..|+|||.+.+.. ++.++|||||||++|||+||+.||.................
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred Ccc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcC
Confidence 321 223446789999999998765 79999999999999999999999976433221111111000
Q ss_pred ---CCcCCC----C---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 626 ---DPNLEG----K---FSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 626 ---~~~~~~----~---~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.... . .....+.++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0 01123578899999999999999999999986
No 213
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.3e-40 Score=351.90 Aligned_cols=265 Identities=17% Similarity=0.199 Sum_probs=192.9
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR 473 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (673)
++.....++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 556677889999999999999999999986 58999999986543 234467788999999999999999999865322
Q ss_pred -----CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC-CCCee
Q 005859 474 -----GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR-RYNPL 547 (673)
Q Consensus 474 -----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~-~~~~k 547 (673)
...++||||+++ +|.+.+.........+++..+..++.|++.||+|||.+..||+||||||+|||++. ++.+|
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 237899999975 56555443223445689999999999999999999932338999999999999997 89999
Q ss_pred eccccccccccCcchhhhhccCCCCCccCCccccCCC-CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh--
Q 005859 548 LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF-- 624 (673)
Q Consensus 548 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~-- 624 (673)
|+|||+++....... .....||..|+|||++.+.. ++.++|||||||++|||+||+.||................
T Consensus 173 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 250 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250 (360)
T ss_dssp ECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence 999999987654322 23456899999999987654 8999999999999999999999997643321111111000
Q ss_pred --------cCCc----------------CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 625 --------IDPN----------------LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 625 --------~~~~----------------~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.++. .........+.++.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000 001112235678999999999999999999999985
No 214
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=8e-41 Score=362.65 Aligned_cols=253 Identities=19% Similarity=0.282 Sum_probs=194.2
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCC----CCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG----RGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~~ 476 (673)
.+|...+.||+|+||+||+|+.. +|+.||||++.... ..+.+|+++|++++|||||++++++.... ....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 46888999999999999999986 48999999986542 22347999999999999999999886421 2246
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC-CCeeeccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR-YNPLLSDSGLHK 555 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~-~~~kl~DfGla~ 555 (673)
++||||+++ +|.+.+.........+++..+..++.||++||+|||+. ||+||||||+|||++.+ +.+||+|||+++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 799999975 67666653222345699999999999999999999987 89999999999999965 568999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh------------
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE------------ 622 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~------------ 622 (673)
...... ......+|..|+|||++.+. .++.++|||||||++|||++|+.||............+.
T Consensus 206 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 206 QLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp ECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred hcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 765432 12345689999999998765 699999999999999999999999975432211111110
Q ss_pred ------hhcCCcCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 ------DFIDPNLEGK-----FSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 ------~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
++..+.+... +....+.++.+|+.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0000111100 12234578999999999999999999999985
No 215
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=8.4e-41 Score=355.94 Aligned_cols=256 Identities=18% Similarity=0.262 Sum_probs=200.1
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCC---CCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG---RGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~~~ 476 (673)
.++|...+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++.... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 357999999999999999999976 588999999976443333467899999999999999999999986532 2468
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 99999996 599998862 3589999999999999999999998 899999999999999999999999999987
Q ss_pred ccCcchh--hhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhh----------
Q 005859 557 LADDIVF--SMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED---------- 623 (673)
Q Consensus 557 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~---------- 623 (673)
....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...............
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 6543221 1234578999999998765 45899999999999999999999998654222111110000
Q ss_pred ---------hc-CCcCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 624 ---------FI-DPNLEGKF-----SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 624 ---------~~-~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.. ........ ....+.++.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 00000011 1223467899999999999999999999985
No 216
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.5e-40 Score=351.67 Aligned_cols=251 Identities=18% Similarity=0.305 Sum_probs=202.1
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCc----------------HHHHHHHHHHHhccCCCCceeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSD----------------EGEFLKGLKILTSLKHENLASL 464 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~E~~~l~~l~H~niv~l 464 (673)
.++|...+.||+|+||.||+|+. +|+.||||++........ .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35799999999999999999999 899999999976432111 1789999999999999999999
Q ss_pred eeEEecCCCCeEEEEEeecCCCChhhh------hccccCCccccCHHHHHHHHHHHHHHHHHHhc-CCCCcccCCcCCCC
Q 005859 465 RGICCSKGRGECFLIYDFVPNGNLLQH------LDLEAGSEKVLEWATRISVIKGIAKGISYLHG-KRPGLVHPNLSAEK 537 (673)
Q Consensus 465 ~~~~~~~~~~~~~lv~E~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~ivHrDlk~~N 537 (673)
++++... +..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ . ||+||||||+|
T Consensus 109 ~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dl~p~N 182 (348)
T 2pml_X 109 EGIITNY--DEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSN 182 (348)
T ss_dssp SEEEESS--SEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS--CEECCCCCGGG
T ss_pred EEEEeeC--CeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC--CEeecCCChHh
Confidence 9999654 789999999999999998 5421 24579999999999999999999998 6 89999999999
Q ss_pred eEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCC-CCCc-chhHHHHHHHHHHHHhCCCCCChhhHhh
Q 005859 538 VLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG-RFTE-KSDIYAFGMIVFQILSGKCSITPFTRQA 615 (673)
Q Consensus 538 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-ksDVwSfGvvl~el~tG~~p~~~~~~~~ 615 (673)
|+++.++.+||+|||+++..... ......++..|+|||.+.+. .++. ++||||||+++|||+||+.||.......
T Consensus 183 il~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 259 (348)
T 2pml_X 183 ILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259 (348)
T ss_dssp EEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred EEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 99999999999999999876543 23345689999999999877 6766 9999999999999999999987543211
Q ss_pred hhccchhhhcCCcC--C---------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 616 AESSKVEDFIDPNL--E---------------GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 616 ~~~~~~~~~~~~~~--~---------------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.. ...+..... . .......+.++.+++.+||+.||++|||+.|+++
T Consensus 260 ~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 260 EL---FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HH---HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HH---HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11 011111000 0 0001334678999999999999999999999985
No 217
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=342.36 Aligned_cols=254 Identities=18% Similarity=0.243 Sum_probs=200.9
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC---CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC---KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 476 (673)
.++|...+.||+|+||.||+|... +++.||+|++..... ....+.+.+|++++++++||||+++++++...+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 367999999999999999999975 488999999976421 2345689999999999999999999999876656788
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||++++ |.+++... ....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~--~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ--GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999876 77777643 234689999999999999999999998 899999999999999999999999999987
Q ss_pred ccCcc-hhhhhccCCCCCccCCccccCCC--CCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 557 LADDI-VFSMLKASAAMGYLAPEYTTTGR--FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 557 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... ........|+..|+|||++.+.. ++.++||||||+++|||++|+.||........... +.. .. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-i~~---~~--~~~ 232 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN-IGK---GS--YAI 232 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHH---CC--CCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH-Hhc---CC--CCC
Confidence 64321 11223456899999999987644 47899999999999999999999975432221111 111 11 112
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQE 665 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~ 665 (673)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 23345788999999999999999999999863
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.9e-41 Score=349.19 Aligned_cols=252 Identities=20% Similarity=0.297 Sum_probs=195.7
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCC-------CcHHHHHHHHHHHhccCCCCceeEeeEEecCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCK-------SDEGEFLKGLKILTSLKHENLASLRGICCSKG 472 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 472 (673)
.++|...+.||+|+||.||+|+... ++.||||++...... .....+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 4579999999999999999999764 889999998754311 1224588999999999999999999998543
Q ss_pred CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC---eeec
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN---PLLS 549 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~---~kl~ 549 (673)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++. +||+
T Consensus 88 --~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 --DYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp --SEEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred --ceEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 37999999999999998863 34689999999999999999999988 8999999999999987664 9999
Q ss_pred cccccccccCcchhhhhccCCCCCccCCcccc---CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcC
Q 005859 550 DSGLHKLLADDIVFSMLKASAAMGYLAPEYTT---TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626 (673)
Q Consensus 550 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~ 626 (673)
|||+++....... .....|+..|+|||++. ...++.++|||||||++|||+||+.||............+.....
T Consensus 160 Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (322)
T 2ycf_A 160 DFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 237 (322)
T ss_dssp CCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC
T ss_pred cCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc
Confidence 9999987754422 22346899999999974 466899999999999999999999998653221111111111000
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
..........+..+.+++.+||+.||++|||+.|+++
T Consensus 238 -~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 -NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0000011123578899999999999999999999984
No 219
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=360.18 Aligned_cols=257 Identities=22% Similarity=0.322 Sum_probs=183.4
Q ss_pred cCCcc-ccccccCCcceEEEEEEc---CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 402 QCFSE-ANLLGKSSFSATYKGILR---DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 402 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
+.|.. .++||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|++++|||||++++++........+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34554 457999999999999976 47899999997542 345788999999999999999999999776678899
Q ss_pred EEEeecCCCChhhhhccccC-----CccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe----cCCCCeee
Q 005859 478 LIYDFVPNGNLLQHLDLEAG-----SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI----HRRYNPLL 548 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl----~~~~~~kl 548 (673)
+||||++ |+|.+++..... ....+++..++.|+.||+.||+|||+. ||+||||||+|||+ +.++.+||
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999996 588888753221 123489999999999999999999998 89999999999999 77889999
Q ss_pred ccccccccccCcch--hhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhh--------
Q 005859 549 SDSGLHKLLADDIV--FSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE-------- 617 (673)
Q Consensus 549 ~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~-------- 617 (673)
+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||.........
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987654221 123345789999999999874 5899999999999999999999998532211000
Q ss_pred ccchhhhcC-C-----------------------cCCCCCC---------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 618 SSKVEDFID-P-----------------------NLEGKFS---------VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 618 ~~~~~~~~~-~-----------------------~~~~~~~---------~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+.+.+. + ....... ...+..+.+|+.+||+.||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 0 0000000 011457889999999999999999999985
No 220
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.1e-40 Score=349.48 Aligned_cols=258 Identities=16% Similarity=0.326 Sum_probs=180.8
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHH-HHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLK-ILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|...+.||+|+||.||+|... +|+.||||++..........++.+|+. +++.++||||+++++++... +..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~--~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE--GDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS--SEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC--CceEE
Confidence 357888899999999999999986 589999999976543333456666666 77788999999999999654 78899
Q ss_pred EEeecCCCChhhhhcccc-CCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEA-GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
||||+++ +|.+++.... .....+++..+..++.|++.||+|||+.. ||+||||||+||+++.++.+||+|||+++..
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL-KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH-SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC-CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9999975 8887775311 12356899999999999999999999841 6999999999999999999999999999876
Q ss_pred cCcchhhhhccCCCCCccCCccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYT----TTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... .....|+..|+|||++ .+..++.++|||||||++|||+||+.||..................+.+....
T Consensus 177 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3aln_A 177 VDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE 254 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS
T ss_pred ccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc
Confidence 54321 2234689999999998 45668999999999999999999999997643221111111111112222222
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....+..+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 255 EREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 2345678999999999999999999999975
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=348.03 Aligned_cols=263 Identities=21% Similarity=0.334 Sum_probs=202.2
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGR 473 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (673)
+++....++|...+.||+|+||.||+|+..+ .||+|++..... ....+.+.+|++++++++||||+++++++...
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-- 101 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-- 101 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS--
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC--
Confidence 3344456788999999999999999999854 599999876532 22335688999999999999999999999654
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+..++||||+++++|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+||+++ ++.+||+|||+
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~--~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK--GILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred CceEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC--CccccCCChhhEEEe-CCCEEEeecCC
Confidence 6789999999999999999732 24689999999999999999999998 899999999999998 67999999999
Q ss_pred cccccCcc----hhhhhccCCCCCccCCccccC---------CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccc
Q 005859 554 HKLLADDI----VFSMLKASAAMGYLAPEYTTT---------GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSK 620 (673)
Q Consensus 554 a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~ 620 (673)
++...... ........|+..|+|||.+.. ..++.++||||||+++|||+||+.||...........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~- 254 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ- 254 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH-
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-
Confidence 87653211 111223458889999999874 3579999999999999999999999976433222111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 621 VEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
+.....+... ....+.++.+++.+||+.||++|||+.++++.|+++..
T Consensus 255 ~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 255 MGTGMKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp HHTTCCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred hccCCCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1111112111 11234678999999999999999999999999998864
No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.6e-40 Score=361.21 Aligned_cols=251 Identities=15% Similarity=0.217 Sum_probs=197.6
Q ss_pred hcCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhcc------CCCCceeEeeEEecCCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSL------KHENLASLRGICCSKGR 473 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~ 473 (673)
..+|++.+.||+|+||+||+|+... ++.||||++... ....+++.+|+++++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~-- 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR-- 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC--
Confidence 3568999999999999999998765 899999999753 22345778888888887 577999999999654
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC--eeeccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN--PLLSDS 551 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~--~kl~Df 551 (673)
+..++||||++ ++|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKN--RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHH--TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeEEccCCCcceEEeec
Confidence 78999999995 69999987432 23589999999999999999999987 7999999999999999887 999999
Q ss_pred cccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhcc------------
Q 005859 552 GLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS------------ 619 (673)
Q Consensus 552 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~------------ 619 (673)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 247 G~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~ 322 (429)
T 3kvw_A 247 GSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322 (429)
T ss_dssp TTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 999765433 2235689999999999999999999999999999999999999865332111100
Q ss_pred -----chhhhcCCc--------------------------------CCCC----CCHHHHHHHHHHHHHccccCCCCCCC
Q 005859 620 -----KVEDFIDPN--------------------------------LEGK----FSVSEASNLGQIALHCTHESPSHRPS 658 (673)
Q Consensus 620 -----~~~~~~~~~--------------------------------~~~~----~~~~~~~~l~~l~~~Cl~~~p~~RPs 658 (673)
....+++.. .... .....+..+.+|+.+||+.||++|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 000000000 0000 01112467899999999999999999
Q ss_pred HHHHHH
Q 005859 659 IENVMQ 664 (673)
Q Consensus 659 ~~evl~ 664 (673)
++|+++
T Consensus 403 a~e~L~ 408 (429)
T 3kvw_A 403 PGQALR 408 (429)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 999986
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.1e-40 Score=339.03 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=203.0
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC--------CcHHHHHHHHHHHhccC-CCCceeEeeEEec
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK--------SDEGEFLKGLKILTSLK-HENLASLRGICCS 470 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 470 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467899999999999999999986 4899999999754311 11356889999999995 9999999999954
Q ss_pred CCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecc
Q 005859 471 KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSD 550 (673)
Q Consensus 471 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~D 550 (673)
.+..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 96 --~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 96 --NTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp --SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECTTCCEEECC
T ss_pred --CCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCcceEEEcCCCcEEEec
Confidence 4789999999999999999973 24689999999999999999999988 899999999999999999999999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCcccc------CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhh
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTT------TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF 624 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~ 624 (673)
||+++...... ......++..|+|||.+. ...++.++||||||+++|||++|+.||................
T Consensus 168 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 245 (298)
T 1phk_A 168 FGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245 (298)
T ss_dssp CTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred ccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCC
Confidence 99998765432 223456889999999885 4568999999999999999999999986543322211111111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 246 Y--QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp C--CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred c--ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1 1111112345678999999999999999999999975
No 224
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.4e-40 Score=365.10 Aligned_cols=259 Identities=14% Similarity=0.206 Sum_probs=202.1
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCce-eEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLA-SLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~~~l 478 (673)
.++|.+.+.||+|+||.||+|+.. +++.||||++.... ...++.+|+++++.++|++.+ .+..++.. .+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~il~~L~~~~~i~~i~~~~~~--~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLLYESKIYRILQGGTGIPNVRWFGVE--GDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC---SSCCHHHHHHHHHHTTTSTTCCCEEEEEEE--TTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc---ccHHHHHHHHHHHHhcCCCCCCeEEEEEee--CCEEEE
Confidence 367999999999999999999974 58999999886543 234588999999999875544 44444433 467899
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe---cCCCCeeeccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLHK 555 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl---~~~~~~kl~DfGla~ 555 (673)
||||+ +++|.+++... ...+++..++.|+.||+.||+|||++ |||||||||+|||| +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~--gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC--CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 99999999742 24699999999999999999999998 89999999999999 688999999999998
Q ss_pred cccCcchh------hhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhh---hhccchhhhcC
Q 005859 556 LLADDIVF------SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA---AESSKVEDFID 626 (673)
Q Consensus 556 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~---~~~~~~~~~~~ 626 (673)
........ ......||..|+|||++.+..++.++|||||||++|||++|+.||....... ...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA 234 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc
Confidence 76543221 1224578999999999999999999999999999999999999997532210 00000011000
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 627 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
..+ .......+.++.+++..||+.||++||++.+|++.|++++.
T Consensus 235 ~~~-~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 235 TSI-EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp SCH-HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ccH-HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 00111234689999999999999999999999999998864
No 225
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.3e-40 Score=357.95 Aligned_cols=253 Identities=17% Similarity=0.280 Sum_probs=193.6
Q ss_pred cCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCC----CeEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR----GECF 477 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~~~ 477 (673)
.+|...+.||+|+||+||+|+..++..||+|++..... ...+|+++++.++||||+++++++..... ...+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 46889999999999999999998777799998865431 22369999999999999999999865422 2378
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec-CCCCeeecccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH-RRYNPLLSDSGLHKL 556 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~-~~~~~kl~DfGla~~ 556 (673)
+||||++++ +.+.+.........+++..+..++.||++||+|||+. ||+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999764 4443332212235689999999999999999999998 899999999999999 789999999999987
Q ss_pred ccCcchhhhhccCCCCCccCCccccCC-CCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh-------------
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE------------- 622 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~------------- 622 (673)
..... ......+|..|+|||++.+. .++.++|||||||++|||++|+.||............+.
T Consensus 192 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 192 LIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp CCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred ccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 65432 22345689999999998765 589999999999999999999999975432211111100
Q ss_pred --hhcC---CcCCC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 --DFID---PNLEG-----KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 --~~~~---~~~~~-----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.... +.... .++...+.++.+++.+||+.||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000 11110 112224578999999999999999999999985
No 226
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.6e-40 Score=349.37 Aligned_cols=256 Identities=19% Similarity=0.283 Sum_probs=198.4
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCC---CCeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG---RGEC 476 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~~~ 476 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++...........+.+|++++++++||||+++++++.... ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 357889999999999999999976 589999999975433333467889999999999999999999875431 3578
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~--~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 99999996 699998863 3589999999999999999999988 899999999999999999999999999987
Q ss_pred ccCcchh---------hhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccch-----
Q 005859 557 LADDIVF---------SMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV----- 621 (673)
Q Consensus 557 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~----- 621 (673)
....... ......||..|+|||++.. ..++.++|||||||++|||++|+.||.............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT 241 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 6532211 1123467899999998765 678999999999999999999999997543221110000
Q ss_pred ---------------hhhcC--CcCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 622 ---------------EDFID--PNLEG----KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 622 ---------------~~~~~--~~~~~----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+... +.... ......+.++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 00000 001234577899999999999999999999986
No 227
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.9e-40 Score=343.70 Aligned_cols=258 Identities=18% Similarity=0.278 Sum_probs=202.1
Q ss_pred HhcCCccccccccCCcceEEEEEEc--CCcEEEEEEecccCCC-CcHHHHHHHHHHHhcc---CCCCceeEeeEEec---
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR--DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSL---KHENLASLRGICCS--- 470 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~--- 470 (673)
..++|...+.||+|+||.||+|+.. +|+.||||++...... .....+.+|+++++.+ +||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999973 5889999999764322 2234677888877776 89999999999862
Q ss_pred CCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecc
Q 005859 471 KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSD 550 (673)
Q Consensus 471 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~D 550 (673)
......++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~--gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTCCEEECS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCCHHHeEEcCCCCEEEec
Confidence 13467899999997 69999987432 23589999999999999999999998 899999999999999999999999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhc-----
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI----- 625 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~----- 625 (673)
||+++...... ......++..|+|||++.+..++.++|||||||++|||+||+.||.................
T Consensus 164 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 164 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred CcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 99998765432 23345689999999999998999999999999999999999999975433221111110000
Q ss_pred -------------C---CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 626 -------------D---PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 626 -------------~---~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00001122334578899999999999999999999984
No 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-40 Score=353.92 Aligned_cols=252 Identities=17% Similarity=0.280 Sum_probs=182.5
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCC----CC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKG----RG 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~ 474 (673)
.++|...+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 367999999999999999999965 589999999976432 223467889999999999999999999985431 24
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~--givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA--DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 679999999 7899988862 3589999999999999999999987 8999999999999999999999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh-----------
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE----------- 622 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~----------- 622 (673)
+..... .....+|..|+|||++.+ ..++.++|||||||++|||+||+.||..............
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 180 RHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred cccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 875532 234578999999999887 6789999999999999999999999965432211111000
Q ss_pred --------hhcC--CcCCC-CC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 --------DFID--PNLEG-KF---SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 --------~~~~--~~~~~-~~---~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.+.. +.... .+ ....+..+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000 00000 00 0123467899999999999999999999985
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.2e-40 Score=341.66 Aligned_cols=255 Identities=20% Similarity=0.319 Sum_probs=199.0
Q ss_pred HHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-CcHHHHHHHHHHHhccC--CCCceeEeeEEecCCC
Q 005859 397 VERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLK--HENLASLRGICCSKGR 473 (673)
Q Consensus 397 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~ 473 (673)
+....++|...+.||+|+||.||++...+++.||||++...... ...+.+.+|++++++++ ||||+++++++...
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-- 100 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-- 100 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS--
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC--
Confidence 33445679999999999999999999988999999999765322 23467899999999997 59999999998654
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccc
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGl 553 (673)
+..++||| +.+++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||++++ +.+||+|||+
T Consensus 101 ~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 101 QYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH--GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp SEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred CEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCcccEEEEC-CeEEEeeccc
Confidence 67999999 558899999973 24689999999999999999999998 8999999999999975 8999999999
Q ss_pred cccccCcchh-hhhccCCCCCccCCccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccch
Q 005859 554 HKLLADDIVF-SMLKASAAMGYLAPEYTTT-----------GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621 (673)
Q Consensus 554 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~ 621 (673)
++........ ......|+..|+|||.+.+ ..++.++||||||+++|||+||+.||........ ..
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~ 249 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KL 249 (313)
T ss_dssp SCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HH
T ss_pred cccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HH
Confidence 9876543221 1234468999999999875 4688999999999999999999999865422211 12
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 622 EDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....++.....++...+.++.+++.+||+.||++||++.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 250 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 2233333333333344578999999999999999999999985
No 230
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.6e-39 Score=348.28 Aligned_cols=201 Identities=17% Similarity=0.253 Sum_probs=169.7
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CC-----CceeEeeEEecCC
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HE-----NLASLRGICCSKG 472 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~ 472 (673)
..++|...+.||+|+||+||+|+.. +++.||||++... .....++.+|+++++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~- 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR- 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET-
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC-
Confidence 3568999999999999999999976 4889999999743 223456788999988884 55 499999998654
Q ss_pred CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec--CCCCeeecc
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH--RRYNPLLSD 550 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~--~~~~~kl~D 550 (673)
+..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||++..||+||||||+|||++ .++.+||+|
T Consensus 129 -~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 -NHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp -TEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred -CceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 78999999995 59999997432 2458999999999999999999997444899999999999994 577899999
Q ss_pred ccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChh
Q 005859 551 SGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611 (673)
Q Consensus 551 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~ 611 (673)
||+++..... .....+|+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999876543 23456899999999999999999999999999999999999999753
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=343.03 Aligned_cols=254 Identities=17% Similarity=0.265 Sum_probs=191.6
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecC---------
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSK--------- 471 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------- 471 (673)
++|...+.||+|+||.||+|+... ++.||||++.... ....+++.+|++++++++||||+++++++...
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 578889999999999999999875 8999999987543 23456789999999999999999999987432
Q ss_pred ---CCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec-CCCCee
Q 005859 472 ---GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH-RRYNPL 547 (673)
Q Consensus 472 ---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~-~~~~~k 547 (673)
..+..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++ +++.+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA--NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSGGGEEEETTTTEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEEcCCCCeEE
Confidence 2367899999997 699999852 3588999999999999999999988 899999999999997 567999
Q ss_pred eccccccccccCcch--hhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhh-
Q 005859 548 LSDSGLHKLLADDIV--FSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED- 623 (673)
Q Consensus 548 l~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~- 623 (673)
|+|||+++....... .......++..|+|||.+.. ..++.++|||||||++|||+||+.||...............
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 241 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 999999987643211 11223456889999998875 67899999999999999999999999754322111110000
Q ss_pred ----------h-------cCCcCC-C-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 624 ----------F-------IDPNLE-G-----KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 624 ----------~-------~~~~~~-~-----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ...... . ......+.++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 000000 0 011224578999999999999999999999985
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.1e-39 Score=335.34 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=201.7
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCC-CCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
..++|.+.+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED--SSSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC--CCeEE
Confidence 3467999999999999999999976 589999999976532 3456789999999999999999999999855 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC---CCeeecccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPLLSDSGLH 554 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~---~~~kl~DfGla 554 (673)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 99999999999998863 24589999999999999999999998 89999999999999764 46999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCC
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
+....... .....++..|+|||.+.+ .++.++||||||+++|||++|+.||..................... ...
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 246 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL--PQW 246 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--GGG
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--hhh
Confidence 87654321 122347888999998875 5899999999999999999999998764332221111111110000 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 635 VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 635 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 234578999999999999999999999987
No 233
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.4e-40 Score=352.98 Aligned_cols=254 Identities=16% Similarity=0.272 Sum_probs=199.5
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccC--------CCCceeEeeEEecC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK--------HENLASLRGICCSK 471 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~~~ 471 (673)
.++|.+.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 367999999999999999999965 4889999999643 233467889999999985 78899999988632
Q ss_pred --CCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCC-----
Q 005859 472 --GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY----- 544 (673)
Q Consensus 472 --~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~----- 544 (673)
.....++||||+ +++|.+++... ....+++..++.|+.||+.||+|||++. ||+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC-RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHeeEeccchhhhh
Confidence 345789999999 66777776532 2245899999999999999999999852 699999999999999775
Q ss_pred --------------------------------------------CeeeccccccccccCcchhhhhccCCCCCccCCccc
Q 005859 545 --------------------------------------------NPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYT 580 (673)
Q Consensus 545 --------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 580 (673)
.+||+|||+++..... .....||..|+|||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhh
Confidence 7999999999876543 2345689999999999
Q ss_pred cCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhh-----hhccchh------------------hhcCCc-----C---
Q 005859 581 TTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA-----AESSKVE------------------DFIDPN-----L--- 629 (673)
Q Consensus 581 ~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~-----~~~~~~~------------------~~~~~~-----~--- 629 (673)
.+..++.++|||||||++|||+||+.||.+..... .....+. .+.... +
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 99899999999999999999999999996432100 0000000 000000 0
Q ss_pred -----------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 630 -----------EGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 630 -----------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....+...+..+.+|+.+||+.||++|||+.|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01235667788999999999999999999999985
No 234
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.1e-39 Score=348.26 Aligned_cols=251 Identities=16% Similarity=0.257 Sum_probs=194.2
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCCC----
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRG---- 474 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~---- 474 (673)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357889999999999999999976 4899999999765322 2246788999999999999999999999654221
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccc
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla 554 (673)
..++||||++ |+|.+++. ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC--CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 2489999996 68988874 2489999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh-----------
Q 005859 555 KLLADDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE----------- 622 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~----------- 622 (673)
+..... .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..............
T Consensus 192 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 192 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred cccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 866442 234568999999999987 6789999999999999999999999975432211111000
Q ss_pred -----------hhcCCcCCCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 -----------DFIDPNLEGK---FSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 -----------~~~~~~~~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
.......... .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000000000 01223578999999999999999999999985
No 235
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-39 Score=342.03 Aligned_cols=249 Identities=15% Similarity=0.212 Sum_probs=198.8
Q ss_pred cCCccccccccCCcceEEEEEE-c-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCC------ceeEeeEEecCCC
Q 005859 402 QCFSEANLLGKSSFSATYKGIL-R-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN------LASLRGICCSKGR 473 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~ 473 (673)
++|.+.+.||+|+||+||+|.. . +++.||||++... ....+.+.+|++++++++|++ |+++++++...
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~-- 89 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH-- 89 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET--
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC--
Confidence 5789999999999999999987 3 5889999998653 233467889999999987665 99999998654
Q ss_pred CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC-----------
Q 005859 474 GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR----------- 542 (673)
Q Consensus 474 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~----------- 542 (673)
+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||++ ||+||||||+|||++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN--KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred CcEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC--CCcCCCCCHHHEEEeccccccccCCcc
Confidence 7899999999 89999999743 224689999999999999999999998 8999999999999987
Q ss_pred --------CCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHh
Q 005859 543 --------RYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQ 614 (673)
Q Consensus 543 --------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~ 614 (673)
++.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred ccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999865432 23456899999999999989999999999999999999999998654322
Q ss_pred hhhccchhhhcC--------------------------------------Cc-CCCCCCHHHHHHHHHHHHHccccCCCC
Q 005859 615 AAESSKVEDFID--------------------------------------PN-LEGKFSVSEASNLGQIALHCTHESPSH 655 (673)
Q Consensus 615 ~~~~~~~~~~~~--------------------------------------~~-~~~~~~~~~~~~l~~l~~~Cl~~~p~~ 655 (673)
.... .+..... +. .........+.++.+++.+||+.||++
T Consensus 241 ~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 241 EHLA-MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHH-HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHH-HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 1100 0000000 00 001123345688999999999999999
Q ss_pred CCCHHHHHH
Q 005859 656 RPSIENVMQ 664 (673)
Q Consensus 656 RPs~~evl~ 664 (673)
|||+.|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999985
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=342.69 Aligned_cols=250 Identities=16% Similarity=0.260 Sum_probs=194.7
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEecCCC----Ce
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGR----GE 475 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~ 475 (673)
++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++..... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888999999999999999976 4899999999764322 224678899999999999999999999865422 23
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
.++||||++ |+|.+++. ..+++..+..++.||+.||+|||++ ||+||||||+||++++++.+||+|||+++
T Consensus 104 ~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~--~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred EEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEeECCCCcEEEeeccccc
Confidence 599999997 68888774 2489999999999999999999998 89999999999999999999999999998
Q ss_pred cccCcchhhhhccCCCCCccCCccccC-CCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh------------
Q 005859 556 LLADDIVFSMLKASAAMGYLAPEYTTT-GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE------------ 622 (673)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~------------ 622 (673)
..... .....+|..|+|||.+.+ ..++.++|||||||++|||+||+.||..............
T Consensus 175 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 175 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp C------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred CCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 65432 234568999999999887 6789999999999999999999999975432111100000
Q ss_pred ----------hhcCCcCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 ----------DFIDPNLE---GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 ----------~~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
........ .......+.++.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 1122345678999999999999999999999985
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-39 Score=342.14 Aligned_cols=252 Identities=15% Similarity=0.230 Sum_probs=173.4
Q ss_pred hcCCccc-cccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCC--CCeE
Q 005859 401 TQCFSEA-NLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG--RGEC 476 (673)
Q Consensus 401 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~~ 476 (673)
.++|.+. ++||+|+||+||+|+.. +|+.||||++... .....+....++.++||||+++++++.... ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4567774 46999999999999987 5899999998643 222222333456679999999999986522 3458
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC---CCCeeeccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR---RYNPLLSDSGL 553 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~---~~~~kl~DfGl 553 (673)
++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||+
T Consensus 102 ~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~--~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH--NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 9999999999999999743 224699999999999999999999998 8999999999999986 45599999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhc--CCcCCC
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI--DPNLEG 631 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~--~~~~~~ 631 (673)
++...... .....+|+.|+|||++.+..++.++|||||||++|||+||+.||...............+. ......
T Consensus 178 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (336)
T 3fhr_A 178 AKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254 (336)
T ss_dssp CEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCT
T ss_pred ceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCc
Confidence 98665432 2345679999999999888899999999999999999999999965433221111111111 111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 632 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 122345678999999999999999999999986
No 238
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2e-39 Score=353.23 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=186.7
Q ss_pred CCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEEEEEe
Q 005859 403 CFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYD 481 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~lv~E 481 (673)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.. .+..++|||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~--~~~~~lv~E 89 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETT--DRFLYIALE 89 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC--SSEEEEEEC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEec--CCeEEEEEe
Confidence 34556889999999998777677999999998653 245678999999987 89999999998854 478999999
Q ss_pred ecCCCChhhhhccccCCccc---cCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCC-------------CC
Q 005859 482 FVPNGNLLQHLDLEAGSEKV---LEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR-------------YN 545 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~-------------~~ 545 (673)
|++ |+|.+++......... .++..++.++.||+.||+|||++ ||+||||||+|||++.+ +.
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC--CccccCCChHhEEEecCcccccccccCCCceE
Confidence 995 6999999743221111 23345678999999999999988 89999999999999754 48
Q ss_pred eeeccccccccccCcchh---hhhccCCCCCccCCccccC-------CCCCcchhHHHHHHHHHHHHh-CCCCCChhhHh
Q 005859 546 PLLSDSGLHKLLADDIVF---SMLKASAAMGYLAPEYTTT-------GRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQ 614 (673)
Q Consensus 546 ~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~ 614 (673)
+||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||......
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999877653221 1234578999999999875 568999999999999999999 99998653222
Q ss_pred hhhccchhhhcC-CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 615 AAESSKVEDFID-PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 615 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ......... +..........+.++.+++.+||+.||++|||+.||++
T Consensus 247 ~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 E--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 111111111 11122234566789999999999999999999999985
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=8.7e-40 Score=341.70 Aligned_cols=247 Identities=19% Similarity=0.304 Sum_probs=200.0
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCC-----cHHHHHHHHHHHhccC--CCCceeEee
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-----DEGEFLKGLKILTSLK--HENLASLRG 466 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--H~niv~l~~ 466 (673)
++.....++|...+.||+|+||.||+|+.. +++.||||++....... ..+.+.+|++++++++ ||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 334445678999999999999999999965 58999999997654221 2246778999999996 599999999
Q ss_pred EEecCCCCeEEEEEeecCC-CChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec-CCC
Q 005859 467 ICCSKGRGECFLIYDFVPN-GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH-RRY 544 (673)
Q Consensus 467 ~~~~~~~~~~~lv~E~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~-~~~ 544 (673)
++.. .+..++||||+.+ ++|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++ +++
T Consensus 116 ~~~~--~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~ 187 (320)
T 3a99_A 116 WFER--PDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC--GVLHRDIKDENILIDLNRG 187 (320)
T ss_dssp EEEC--SSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEETTTT
T ss_pred EEec--CCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC--CcEeCCCCHHHEEEeCCCC
Confidence 9955 4788999999976 899999873 34689999999999999999999987 899999999999999 788
Q ss_pred CeeeccccccccccCcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhh
Q 005859 545 NPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED 623 (673)
Q Consensus 545 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~ 623 (673)
.+||+|||+++...... .....||..|+|||++.+..+ +.++||||||+++|||+||+.||..........
T Consensus 188 ~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~----- 259 (320)
T 3a99_A 188 ELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ----- 259 (320)
T ss_dssp EEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCC-----
T ss_pred CEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhccc-----
Confidence 99999999998776432 233568999999999987665 788999999999999999999987543211100
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 624 FIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ..+...+.++.+++.+||+.||++|||++|+++
T Consensus 260 ---~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 ---V----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---C----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---c----cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 111223467899999999999999999999986
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=336.93 Aligned_cols=246 Identities=20% Similarity=0.332 Sum_probs=193.2
Q ss_pred HHHHHhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC-----CcHHHHHHHHHHHhcc----CCCCceeEe
Q 005859 396 EVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK-----SDEGEFLKGLKILTSL----KHENLASLR 465 (673)
Q Consensus 396 ~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l----~H~niv~l~ 465 (673)
+.+...++|...+.||+|+||.||+|+.. +++.||||++...... .....+.+|++++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34445678999999999999999999865 5889999999765321 1223466799999998 899999999
Q ss_pred eEEecCCCCeEEEEEee-cCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec-CC
Q 005859 466 GICCSKGRGECFLIYDF-VPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH-RR 543 (673)
Q Consensus 466 ~~~~~~~~~~~~lv~E~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~-~~ 543 (673)
+++... +..++|||| +++++|.+++.. ...+++..++.++.||+.||+|||+. ||+||||||+||+++ ++
T Consensus 105 ~~~~~~--~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 105 DWFETQ--EGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR--GVVHRDIKDENILIDLRR 176 (312)
T ss_dssp EEC-------CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH--TEECCCCSGGGEEEETTT
T ss_pred EEEecC--CeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCChhhEEEeCCC
Confidence 998543 678999999 789999999973 24589999999999999999999987 799999999999999 88
Q ss_pred CCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCC-CcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchh
Q 005859 544 YNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF-TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622 (673)
Q Consensus 544 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~ 622 (673)
+.+||+|||+++...... .....++..|+|||++.+..+ +.++||||||+++|||++|+.||.........
T Consensus 177 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----- 248 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEA----- 248 (312)
T ss_dssp TEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHT-----
T ss_pred CeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhh-----
Confidence 999999999998776542 234568999999999887666 45999999999999999999998754321110
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 623 DFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
. ...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 249 -----~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 249 -----E--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -----C--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----c--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 1122334577899999999999999999999986
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.7e-39 Score=343.42 Aligned_cols=253 Identities=17% Similarity=0.284 Sum_probs=197.8
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccC-----------CCCceeEeeEEe
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-----------HENLASLRGICC 469 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~ 469 (673)
++|...+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC--ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 57899999999999999999975 5899999998743 234467889999999886 899999999987
Q ss_pred cCCC--CeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEec------
Q 005859 470 SKGR--GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH------ 541 (673)
Q Consensus 470 ~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~------ 541 (673)
.... ...++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.. ||+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC-GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT-CEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC-CEEecCCChHHeEEeccCCCc
Confidence 5422 2789999999 899999997432 245899999999999999999999842 699999999999994
Q ss_pred CCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhh-----
Q 005859 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA----- 616 (673)
Q Consensus 542 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~----- 616 (673)
..+.+||+|||+++..... .....+|+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4457999999999876543 2345689999999999999999999999999999999999999975321100
Q ss_pred hccchhh------------------hcCC-------------------cCCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 005859 617 ESSKVED------------------FIDP-------------------NLEGKFSVSEASNLGQIALHCTHESPSHRPSI 659 (673)
Q Consensus 617 ~~~~~~~------------------~~~~-------------------~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~ 659 (673)
....+.+ .... .....++...+.++.+|+.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 0000000 0000 00112456678899999999999999999999
Q ss_pred HHHHH
Q 005859 660 ENVMQ 664 (673)
Q Consensus 660 ~evl~ 664 (673)
+|+++
T Consensus 329 ~ell~ 333 (373)
T 1q8y_A 329 GGLVN 333 (373)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99986
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=8.7e-39 Score=338.61 Aligned_cols=250 Identities=15% Similarity=0.225 Sum_probs=196.9
Q ss_pred hcCCccccccccCCcceEEEEEEcC-C-cEEEEEEecccCCCCcHHHHHHHHHHHhccCCCC------ceeEeeEEecCC
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRD-G-SVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN------LASLRGICCSKG 472 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 472 (673)
.++|.+.+.||+|+||+||+|+... + +.||||++... ....+.+.+|++++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~- 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH- 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC-
Confidence 3578999999999999999999753 4 78999999653 234567889999999998766 89999988554
Q ss_pred CCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEe------------
Q 005859 473 RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI------------ 540 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl------------ 540 (673)
+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ ||+||||||+|||+
T Consensus 95 -~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~--~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 95 -GHMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN--QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp -TEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred -CeEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEEeccccccccccc
Confidence 7899999999 67887777643 224689999999999999999999987 89999999999999
Q ss_pred -------cCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhH
Q 005859 541 -------HRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR 613 (673)
Q Consensus 541 -------~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~ 613 (673)
+.++.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 56789999999999865432 2345689999999999999999999999999999999999999975432
Q ss_pred hhhhccchhhhcCC-------------------------------------c--CCCCCCHHHHHHHHHHHHHccccCCC
Q 005859 614 QAAESSKVEDFIDP-------------------------------------N--LEGKFSVSEASNLGQIALHCTHESPS 654 (673)
Q Consensus 614 ~~~~~~~~~~~~~~-------------------------------------~--~~~~~~~~~~~~l~~l~~~Cl~~~p~ 654 (673)
...... +.....+ . .........+.++.+++.+||+.||+
T Consensus 245 ~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 245 REHLVM-MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHHHHH-HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHHHHH-HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 211000 0000000 0 00011233466899999999999999
Q ss_pred CCCCHHHHHH
Q 005859 655 HRPSIENVMQ 664 (673)
Q Consensus 655 ~RPs~~evl~ 664 (673)
+|||+.|+++
T Consensus 324 ~Rpt~~e~l~ 333 (355)
T 2eu9_A 324 QRITLAEALL 333 (355)
T ss_dssp TSCCHHHHTT
T ss_pred hCcCHHHHhc
Confidence 9999999974
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9.2e-39 Score=333.28 Aligned_cols=253 Identities=17% Similarity=0.276 Sum_probs=178.9
Q ss_pred hcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHH-HHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEG-EFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~-~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
.++|+..+.||+|+||.||+|+.. +|+.||||++.......... .+.++..+++.++||||+++++++... +..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~--~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN--TDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--SEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC--CcEEE
Confidence 457888999999999999999986 58999999997654322223 344455678888999999999999654 78999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+ ++.+..+.... ...+++..+..++.|++.||+|||+.. ||+||||||+||+++.++.+||+|||+++...
T Consensus 102 v~e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp EECCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC-CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 99999 45555544321 245899999999999999999999832 79999999999999999999999999997665
Q ss_pred CcchhhhhccCCCCCccCCcccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTT-----TGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
... ......++..|+|||++. ...++.++|||||||++|||+||+.||..................+... .
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~ 252 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLP--G 252 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCC--S
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCC--c
Confidence 432 123346899999999985 4568999999999999999999999987532211111111111111111 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 634 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
....+.++.+++.+||+.||.+||++.|+++
T Consensus 253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1234578999999999999999999999975
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.3e-39 Score=361.79 Aligned_cols=265 Identities=20% Similarity=0.265 Sum_probs=205.2
Q ss_pred cCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEec----CCCCeE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS----KGRGEC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~~ 476 (673)
++|...+.||+|+||.||+|... +|+.||||++.........+.+.+|++++++++||||+++++++.. ...+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 57999999999999999999975 4899999998765433445679999999999999999999998744 124677
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCC---eeeccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN---PLLSDSGL 553 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~---~kl~DfGl 553 (673)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~--gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN--RIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT--TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997432 223588999999999999999999997 8999999999999997765 89999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccc----------hhh
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSK----------VED 623 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~----------~~~ 623 (673)
++....... .....|+..|+|||.+.+..++.++|||||||++|||+||+.||.+......+... ..+
T Consensus 171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 987655432 23457899999999999999999999999999999999999999653222111100 000
Q ss_pred hcC--------CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHHhhc
Q 005859 624 FID--------PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIEN-----VMQELSSIIG 671 (673)
Q Consensus 624 ~~~--------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e-----vl~~L~~i~~ 671 (673)
... ...........+..+.+++.+||+.||++|||+.| ..+.++.++.
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 000 01112344567889999999999999999999988 4566666654
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=346.27 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=185.4
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEEEE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~lv 479 (673)
..+|...+.||+|+||+||.....+|+.||||++.... ...+.+|+++|+++ +|||||++++++.+ .+..++|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~l~~~~~~--~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC----FSFADREVQLLRESDEHPNVIRYFCTEKD--RQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT----EEECHHHHHHHHHSCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEec--CCEEEEE
Confidence 45688889999999999765556679999999996543 22356899999999 89999999999855 4788999
Q ss_pred EeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC-----CCCeeecccccc
Q 005859 480 YDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR-----RYNPLLSDSGLH 554 (673)
Q Consensus 480 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~-----~~~~kl~DfGla 554 (673)
|||++ |+|.+++.... ..+.+..+..++.||+.||+|||+. ||+||||||+|||++. ...+||+|||++
T Consensus 97 ~E~~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL--NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT--TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC--cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99996 69999997432 2344455678999999999999998 8999999999999953 335789999999
Q ss_pred ccccCcch--hhhhccCCCCCccCCcccc---CCCCCcchhHHHHHHHHHHHHh-CCCCCChhhHhhhhccchhhhcCCc
Q 005859 555 KLLADDIV--FSMLKASAAMGYLAPEYTT---TGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPN 628 (673)
Q Consensus 555 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGvvl~el~t-G~~p~~~~~~~~~~~~~~~~~~~~~ 628 (673)
+....... .......||+.|+|||++. ...++.++|||||||++|||+| |+.||.......... ........
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--~~~~~~~~ 248 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--LLGACSLD 248 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--HTTCCCCT
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--HhccCCcc
Confidence 87654321 1233467999999999997 4567889999999999999999 888885432211110 11000000
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 629 LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 629 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
........+..+.+++.+||+.||++|||+.||++
T Consensus 249 -~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 -CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 01122345567889999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.9e-38 Score=323.54 Aligned_cols=230 Identities=10% Similarity=0.110 Sum_probs=183.1
Q ss_pred cCCccccccccCCcceEEEEEEcC-CcEEEEEEecccCCCC--cHHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEEE
Q 005859 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKS--DEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~l 478 (673)
++|.+.+.||+|+||.||+|+... ++.||||++....... ..+.+.+|++++++++||||+++++++... +..|+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~--~~~~l 108 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR--AGGLV 108 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC--CcEEE
Confidence 468889999999999999999865 8999999998654322 236799999999999999999999999654 78999
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
||||+++++|.+++.. . ....++.+|+.|++.||+|||++ ||+||||||+|||+++++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~--givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRA--GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EEECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHC--CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999999952 1 34556888999999999999998 89999999999999999999998543
Q ss_pred CcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCC--CCCCHH
Q 005859 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLE--GKFSVS 636 (673)
Q Consensus 559 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 636 (673)
|++| ++.++|||||||++|||+||+.||............. ........ ......
T Consensus 175 ---------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 231 (286)
T 3uqc_A 175 ---------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE-RDTAGQPIEPADIDRD 231 (286)
T ss_dssp ---------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC-BCTTSCBCCHHHHCTT
T ss_pred ---------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH-HHhccCCCChhhcccC
Confidence 3433 6899999999999999999999997543211110000 00011000 011223
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005859 637 EASNLGQIALHCTHESPSHRPSIENVMQELSSIIG 671 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~i~~ 671 (673)
.+.++.+++.+||+.||++| |+.|+++.|+++..
T Consensus 232 ~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 232 IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 45789999999999999999 99999999998764
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-38 Score=363.28 Aligned_cols=242 Identities=18% Similarity=0.258 Sum_probs=193.7
Q ss_pred cCCccccccccCCcceEEEEEEc--CCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCceeEeeEEecCCCC---eE
Q 005859 402 QCFSEANLLGKSSFSATYKGILR--DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRG---EC 476 (673)
Q Consensus 402 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~---~~ 476 (673)
++|.+.+.||+|+||+||+|+.. +|+.||||++...........+.+|++++++++||||+++++++...+.. ..
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999976 58999999987543233346789999999999999999999999764321 26
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
|+||||+++++|.+++. ..+++..++.|+.||+.||+|||++ ||+||||||+|||++.+ .+||+|||+++.
T Consensus 160 ~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~--giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI--GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC--CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 99999999999998775 2589999999999999999999998 89999999999999986 899999999987
Q ss_pred ccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHH
Q 005859 557 LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.... ....||+.|+|||++.++ ++.++|||||||++|||++|..|+..... ... ........
T Consensus 231 ~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~----~~~~~~~~ 292 (681)
T 2pzi_A 231 INSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV--------DGL----PEDDPVLK 292 (681)
T ss_dssp TTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSC----CTTCHHHH
T ss_pred cccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc--------ccc----cccccccc
Confidence 6543 345689999999998765 48999999999999999999877653210 000 01111122
Q ss_pred HHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhh
Q 005859 637 EASNLGQIALHCTHESPSHRP-SIENVMQELSSII 670 (673)
Q Consensus 637 ~~~~l~~l~~~Cl~~~p~~RP-s~~evl~~L~~i~ 670 (673)
.+..+.+++.+||+.||++|| +++++.+.|..++
T Consensus 293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 346789999999999999999 5667777776654
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-38 Score=340.49 Aligned_cols=246 Identities=15% Similarity=0.140 Sum_probs=183.2
Q ss_pred HhcCCccccccccCCcceEEEEEEc-CCcEEEEEEecccCCC--CcHHHHHHHHHHHhccCC-CCcee------------
Q 005859 400 ATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCK--SDEGEFLKGLKILTSLKH-ENLAS------------ 463 (673)
Q Consensus 400 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H-~niv~------------ 463 (673)
.+..|...+.||+|+||+||+|+.. +|+.||||++...... ...+.|.+|+.+++.++| +|...
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3456778889999999999999965 5999999998744322 235689999999999987 32111
Q ss_pred ---------EeeEEecCC---CCeEEEEEeecCCCChhhhhccc---cCCccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Q 005859 464 ---------LRGICCSKG---RGECFLIYDFVPNGNLLQHLDLE---AGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528 (673)
Q Consensus 464 ---------l~~~~~~~~---~~~~~lv~E~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~i 528 (673)
+..++.... ....+++|+++ +++|.++++.. ......+++..++.++.||++||+|||++ ||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~i 232 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY--GL 232 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT--TE
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC--Cc
Confidence 111111111 12356777766 68999988421 12345688999999999999999999987 89
Q ss_pred ccCCcCCCCeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccc----------cCCCCCcchhHHHHHHHH
Q 005859 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYT----------TTGRFTEKSDIYAFGMIV 598 (673)
Q Consensus 529 vHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~ksDVwSfGvvl 598 (673)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999876543 234467 899999999 555689999999999999
Q ss_pred HHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 005859 599 FQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 663 (673)
Q Consensus 599 ~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl 663 (673)
|||+||+.||........ ....+... . ..+.++.+++.+||+.||++||++.+++
T Consensus 308 ~elltg~~Pf~~~~~~~~----~~~~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG----SEWIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC----SGGGGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhh----HHHHHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999976433221 11111110 1 2347799999999999999999987775
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.1e-37 Score=319.15 Aligned_cols=228 Identities=14% Similarity=0.250 Sum_probs=178.2
Q ss_pred cCCccc-cccccCCcceEEEEEEc-CCcEEEEEEecccCCCCcHHHHHHHHHHH-hccCCCCceeEeeEEec--CCCCeE
Q 005859 402 QCFSEA-NLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKIL-TSLKHENLASLRGICCS--KGRGEC 476 (673)
Q Consensus 402 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~--~~~~~~ 476 (673)
++|... +.||+|+||.||+|... +++.||||++.. ...+.+|++++ +..+||||+++++++.. .+....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 346655 78999999999999975 589999999853 24678899988 55699999999999854 224678
Q ss_pred EEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecC---CCCeeeccccc
Q 005859 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR---RYNPLLSDSGL 553 (673)
Q Consensus 477 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~---~~~~kl~DfGl 553 (673)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 9999999999999999743 224689999999999999999999998 8999999999999998 78899999999
Q ss_pred cccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhhHhhhhccchhhhcCCcCCCCC
Q 005859 554 HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633 (673)
Q Consensus 554 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
++... +..++.++|||||||++|||+||+.||.................... ...
T Consensus 167 a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~ 221 (299)
T 3m2w_A 167 AKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEF 221 (299)
T ss_dssp CEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSS
T ss_pred ccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccC
Confidence 86432 23578899999999999999999999965433221111111111111 111
Q ss_pred C----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005859 634 S----VSEASNLGQIALHCTHESPSHRPSIENVMQ 664 (673)
Q Consensus 634 ~----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~ 664 (673)
+ ...+.++.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 222 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2 224578999999999999999999999986
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=8.4e-37 Score=321.34 Aligned_cols=243 Identities=16% Similarity=0.178 Sum_probs=186.8
Q ss_pred hcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCC-------CCcHHHHHHHHHHHhccC---------CCCceeE
Q 005859 401 TQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSC-------KSDEGEFLKGLKILTSLK---------HENLASL 464 (673)
Q Consensus 401 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------H~niv~l 464 (673)
.++|...+.||+|+||+||+|+. +|+.||||++..... ....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688889999999999999998 689999999986532 223378899999999886 7777777
Q ss_pred eeEEecC----------------------------CCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHH
Q 005859 465 RGICCSK----------------------------GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK 516 (673)
Q Consensus 465 ~~~~~~~----------------------------~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 516 (673)
.+++... +.+..++||||+++|++.+.+.. ..+++..++.|+.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 7765311 24689999999999987776642 45899999999999999
Q ss_pred HHHHHh-cCCCCcccCCcCCCCeEecCCC--------------------CeeeccccccccccCcchhhhhccCCCCCcc
Q 005859 517 GISYLH-GKRPGLVHPNLSAEKVLIHRRY--------------------NPLLSDSGLHKLLADDIVFSMLKASAAMGYL 575 (673)
Q Consensus 517 gL~yLH-~~~~~ivHrDlk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~ 575 (673)
||+||| ++ ||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+
T Consensus 173 aL~~lH~~~--~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~ 244 (336)
T 2vuw_A 173 SLAVAEASL--RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSM 244 (336)
T ss_dssp HHHHHHHHH--CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTT
T ss_pred HHHHHHHhC--CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeeccc
Confidence 999999 77 799999999999999887 8999999999876543 246899999
Q ss_pred CCccccCCCCCcchhHHHHHHH-HHHHHhCCCCCChhhHhhhhccchh-hhc-CCcCCCCCCHHHHHHHHHHHHHccccC
Q 005859 576 APEYTTTGRFTEKSDIYAFGMI-VFQILSGKCSITPFTRQAAESSKVE-DFI-DPNLEGKFSVSEASNLGQIALHCTHES 652 (673)
Q Consensus 576 aPE~~~~~~~s~ksDVwSfGvv-l~el~tG~~p~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~l~~~Cl~~~ 652 (673)
|||++.+.. +.++||||+|++ .+++++|..||............+. ... ............+.++.+|+.+||+.|
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence 999998766 899999998777 7788899988754211010111111 111 111111223457789999999999976
Q ss_pred CCCCCCHHHHH
Q 005859 653 PSHRPSIENVM 663 (673)
Q Consensus 653 p~~RPs~~evl 663 (673)
|++|++
T Consensus 324 -----sa~e~l 329 (336)
T 2vuw_A 324 -----SATDLL 329 (336)
T ss_dssp -----SHHHHH
T ss_pred -----CHHHHH
Confidence 899887
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=3.4e-31 Score=275.55 Aligned_cols=213 Identities=33% Similarity=0.597 Sum_probs=197.2
Q ss_pred CCChhHHHHHHHHHHhcCCCCCCcCCCCCCCCCCCCCCCceEEeCCC---CCEEEEEecCCCccc--ccCccccCCCCCC
Q 005859 18 LSSTSEVDILMHIKDSLDPENRLLTSWAPNADPCSSDSFDGVACDEN---GRVANISLQGKGLSG--EIPAAVGGLKSLT 92 (673)
Q Consensus 18 ~~~~~~~~~ll~~~~~~~~~~~~l~~w~~~~~~C~~~~w~gv~c~~~---~~v~~l~l~~~~l~g--~~p~~~~~l~~L~ 92 (673)
.|.++|++||++||+++.... .+.+|..+.++|. +.|.||.|+.. ++|+.|+|++++++| .+|..|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~-~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCN-RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTT-TCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCc-CCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 467889999999999995333 5899987778885 35999999864 799999999999999 9999999999999
Q ss_pred eEeCcC-CcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeeccccc
Q 005859 93 GLYLHF-NALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYN 171 (673)
Q Consensus 93 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N 171 (673)
+|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..|..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCccccCCC-cccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhhhcc
Q 005859 172 QLTGAIPASLGDLG-MLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 172 ~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~~ 233 (673)
++++.+|..+..++ +|+.|+|++|++++.+|..+..+. |+.|++++|.+++.+|..+..+.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~ 221 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDK 221 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTS
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCC
Confidence 99999999999998 999999999999999999999887 99999999999999888776554
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=7.1e-31 Score=293.86 Aligned_cols=185 Identities=12% Similarity=0.043 Sum_probs=127.9
Q ss_pred ccccCCcceEEEEE-EcCCcEEEEEEecccCCC---------CcHHHHHHHHHHHhcc-CCCCceeEeeEEecCCCCeEE
Q 005859 409 LLGKSSFSATYKGI-LRDGSVVAVKCIAKTSCK---------SDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 409 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---------~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~ 477 (673)
..+.|++|.++.++ .-.|+.+|+|++.+.... ...++|.+|+++|+++ .|+||+++++++.+ .+..|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed--~~~~y 318 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN--AQSGW 318 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC--SSEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE--CCEEE
Confidence 35566666666554 234899999999764311 1235799999999999 79999999999954 47899
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
|||||++||+|.++|.. ...++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+..
T Consensus 319 LVMEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~--GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 319 LVMEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ--GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT--TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC--CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999999973 2346654 5899999999999998 8999999999999999999999999999877
Q ss_pred cCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 005859 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKC 606 (673)
Q Consensus 558 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~ 606 (673)
..+.. .....+||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus 390 ~~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 390 PQDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp C---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CCCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 65432 2334579999999999875 56788999999999888876643
No 253
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=3.5e-28 Score=277.30 Aligned_cols=207 Identities=25% Similarity=0.409 Sum_probs=187.0
Q ss_pred ChhHHHHHHHHHHhcCCC-CC-------CcCCCCCCCCCCCCCCC---ceEEeCCCCCEEEEEecCCCcccccCccccCC
Q 005859 20 STSEVDILMHIKDSLDPE-NR-------LLTSWAPNADPCSSDSF---DGVACDENGRVANISLQGKGLSGEIPAAVGGL 88 (673)
Q Consensus 20 ~~~~~~~ll~~~~~~~~~-~~-------~l~~w~~~~~~C~~~~w---~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l 88 (673)
...|++||.+|+++++.. .. ...+|+.+.++|. | .||+|+..++|+.|+|++++++|.+|++|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~---w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDM---WGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGG---TTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccc---ccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcC
Confidence 356899999999998532 11 1237988888887 8 99999988999999999999999999999999
Q ss_pred CCCCeEeCcCCc--------------------------------------------------------------------
Q 005859 89 KSLTGLYLHFNA-------------------------------------------------------------------- 100 (673)
Q Consensus 89 ~~L~~L~L~~N~-------------------------------------------------------------------- 100 (673)
++|++|+|++|.
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 999999999984
Q ss_pred ----------CCccCCcccCCCCCCCEEEccCCCCCCC-----------------Cccccc--CCCCCcEeeccCccccc
Q 005859 101 ----------LNGVIPKEIASLSELSDLYLNVNNLSGK-----------------IPSQIG--NMTNLQVLQLCYNKLTG 151 (673)
Q Consensus 101 ----------l~~~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~ 151 (673)
|+| +|..|+++++|++|+|++|++++. +|..++ ++++|++|+|++|++.+
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 445 889999999999999999999986 999999 99999999999999999
Q ss_pred cCchhhcCccccCeecccccc-cCc-cCCccccCC------CcccccccccccCCCCCcc--cccCCCCCCEEEccCCCC
Q 005859 152 NIPTQLGSLRKLSVLALQYNQ-LTG-AIPASLGDL------GMLMRLDLSFNNLFGPVPV--KLANVPKLEVLDIRNNSF 221 (673)
Q Consensus 152 ~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l 221 (673)
.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|+.|+|++|+++ .+|. .+.++++|+.|++++|++
T Consensus 264 ~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l 342 (636)
T 4eco_A 264 KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQL 342 (636)
T ss_dssp SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCC
T ss_pred cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcC
Confidence 999999999999999999998 998 899988877 99999999999999 7888 899999999999999999
Q ss_pred CcCCchhhhhc
Q 005859 222 SGNVPPALKRL 232 (673)
Q Consensus 222 ~g~~p~~l~~~ 232 (673)
+|.+| .+..+
T Consensus 343 ~g~ip-~~~~l 352 (636)
T 4eco_A 343 EGKLP-AFGSE 352 (636)
T ss_dssp EEECC-CCEEE
T ss_pred ccchh-hhCCC
Confidence 99999 66554
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=2e-27 Score=277.07 Aligned_cols=212 Identities=30% Similarity=0.423 Sum_probs=168.6
Q ss_pred HhhcCCChhHHHHHHHHHHhcCCCCCCcCCCCCCCCCCCCCCCceEEeCCCCCEEEEEecCCCcccc---cC--------
Q 005859 14 VTYTLSSTSEVDILMHIKDSLDPENRLLTSWAPNADPCSSDSFDGVACDENGRVANISLQGKGLSGE---IP-------- 82 (673)
Q Consensus 14 ~~~~~~~~~~~~~ll~~~~~~~~~~~~l~~w~~~~~~C~~~~w~gv~c~~~~~v~~l~l~~~~l~g~---~p-------- 82 (673)
++++++.++|++||++||+++.+.. .+++|..++++|. |.||+|+ .++|+.|+|++++++|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C~---w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPCT---FDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGGG---STTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred CccccCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCcC---CcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 3445556889999999999995333 6899987788887 9999998 79999999999999987 44
Q ss_pred ---------------ccccCCCCCCeEeCcCCcCCccCCc--ccCCCCCCCEEEccCCCCCCCCcccc-cCCCCCcEeec
Q 005859 83 ---------------AAVGGLKSLTGLYLHFNALNGVIPK--EIASLSELSDLYLNVNNLSGKIPSQI-GNMTNLQVLQL 144 (673)
Q Consensus 83 ---------------~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~L 144 (673)
..|+.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 4677788888888888888888887 88888888888888888887777765 77888888888
Q ss_pred cCccccccCchh---hcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCC
Q 005859 145 CYNKLTGNIPTQ---LGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSF 221 (673)
Q Consensus 145 ~~N~l~~~~p~~---l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 221 (673)
++|++++..|.. +.++++|++|++++|.+++.+|. ..+++|++|+|++|++++.+|. +.++++|++|++++|.+
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l 235 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 235 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCC
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcC
Confidence 888888777766 67777788888877777765553 6777888888888888877776 77888888888888888
Q ss_pred CcCCchhhhhcc
Q 005859 222 SGNVPPALKRLN 233 (673)
Q Consensus 222 ~g~~p~~l~~~~ 233 (673)
++.+|..+..+.
T Consensus 236 ~~~~~~~l~~l~ 247 (768)
T 3rgz_A 236 SGDFSRAISTCT 247 (768)
T ss_dssp CSCHHHHTTTCS
T ss_pred CCcccHHHhcCC
Confidence 887777776554
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=1.2e-27 Score=278.26 Aligned_cols=203 Identities=25% Similarity=0.377 Sum_probs=180.4
Q ss_pred CChhHHHHHHHHHHhcCCCCCCcCCCCCCC-----CC--CCCCCC------------ceEEeCCCCCEEEEEecCCCccc
Q 005859 19 SSTSEVDILMHIKDSLDPENRLLTSWAPNA-----DP--CSSDSF------------DGVACDENGRVANISLQGKGLSG 79 (673)
Q Consensus 19 ~~~~~~~~ll~~~~~~~~~~~~l~~w~~~~-----~~--C~~~~w------------~gv~c~~~~~v~~l~l~~~~l~g 79 (673)
....|++||++||++++.. +|+.++ +| |. | .||.|+..++|+.|+|++++|+|
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~---W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLN---WNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCS---CCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccc---cccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 3467999999999999532 786544 56 54 9 99999988999999999999999
Q ss_pred ccCccccCCCCCCeEeC-cCCcCCcc------------------------------------------------------
Q 005859 80 EIPAAVGGLKSLTGLYL-HFNALNGV------------------------------------------------------ 104 (673)
Q Consensus 80 ~~p~~~~~l~~L~~L~L-~~N~l~~~------------------------------------------------------ 104 (673)
.+|++|++|++|++|+| ++|.++|.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 77866554
Q ss_pred ----------------------CCcccCCCCCCCEEEccCCCCCC-----------------CCccccc--CCCCCcEee
Q 005859 105 ----------------------IPKEIASLSELSDLYLNVNNLSG-----------------KIPSQIG--NMTNLQVLQ 143 (673)
Q Consensus 105 ----------------------~p~~~~~l~~L~~L~l~~N~l~~-----------------~~p~~~~--~l~~L~~L~ 143 (673)
+|..|++|++|++|+|++|+|++ .+|..++ ++++|++|+
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred ccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 78899999999999999999998 3899988 999999999
Q ss_pred ccCccccccCchhhcCccccCeecccccc-cCc-cCCccccCCC-------cccccccccccCCCCCcc--cccCCCCCC
Q 005859 144 LCYNKLTGNIPTQLGSLRKLSVLALQYNQ-LTG-AIPASLGDLG-------MLMRLDLSFNNLFGPVPV--KLANVPKLE 212 (673)
Q Consensus 144 L~~N~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~ 212 (673)
|++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..++.++ +|+.|+|++|+++ .+|. .+.++++|+
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~ 576 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG 576 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC
Confidence 99999999999999999999999999998 998 8898777665 9999999999999 7888 899999999
Q ss_pred EEEccCCCCCcCCchhhhhc
Q 005859 213 VLDIRNNSFSGNVPPALKRL 232 (673)
Q Consensus 213 ~L~l~~N~l~g~~p~~l~~~ 232 (673)
.|+|++|+++ .+| .+..+
T Consensus 577 ~L~Ls~N~l~-~lp-~~~~L 594 (876)
T 4ecn_A 577 LLDCVHNKVR-HLE-AFGTN 594 (876)
T ss_dssp EEECTTSCCC-BCC-CCCTT
T ss_pred EEECCCCCcc-cch-hhcCC
Confidence 9999999999 788 55544
No 256
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=1.9e-27 Score=264.67 Aligned_cols=185 Identities=11% Similarity=0.103 Sum_probs=143.4
Q ss_pred ccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCc-------HHHHHHHHHHHhccCCCCceeEeeEEecCCCCeEE
Q 005859 405 SEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSD-------EGEFLKGLKILTSLKHENLASLRGICCSKGRGECF 477 (673)
Q Consensus 405 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 477 (673)
...+.||+|+||+||+|.. .++.+|+|+......... .+.+.+|++++++++||||+++..++... +..+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL--DNKR 415 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET--TTTE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC--CccE
Confidence 3356899999999999954 478899998755432111 24589999999999999999555555433 4569
Q ss_pred EEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 478 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
+||||+++|+|.+++.. +..++.|+++||+|||++ ||+||||||+|||+++ .+||+|||+++..
T Consensus 416 lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~--gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN--DVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT--TEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC--cCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 99999999999999962 457999999999999987 8999999999999998 9999999999987
Q ss_pred cCcchhh------hhccCCCCCccCCccccC--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 005859 558 ADDIVFS------MLKASAAMGYLAPEYTTT--GRFTEKSDIYAFGMIVFQILSGKCSI 608 (673)
Q Consensus 558 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGvvl~el~tG~~p~ 608 (673)
....... .....||+.|||||++.. ..|+.++|+||..+-..+.+.++.+|
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 6543211 234578999999999986 56888999999999999988877665
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=3.4e-26 Score=239.25 Aligned_cols=207 Identities=23% Similarity=0.345 Sum_probs=183.3
Q ss_pred CChhHHHHHHHHHHhcC-CCCCCcCCCC----CCCCCCCCCCCceEEeCC---------CCCEEEEEecCCCcccccCcc
Q 005859 19 SSTSEVDILMHIKDSLD-PENRLLTSWA----PNADPCSSDSFDGVACDE---------NGRVANISLQGKGLSGEIPAA 84 (673)
Q Consensus 19 ~~~~~~~~ll~~~~~~~-~~~~~l~~w~----~~~~~C~~~~w~gv~c~~---------~~~v~~l~l~~~~l~g~~p~~ 84 (673)
...+|.++|++||.++. +....+.+|. .+.++|+ |.|+.|+. ..+|+.|+|++|+++ .+|..
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~---~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET---RTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC---SHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc---cCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 34578999999999872 3344567893 4567776 99999952 378999999999998 88999
Q ss_pred ccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcC-----
Q 005859 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGS----- 159 (673)
Q Consensus 85 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~----- 159 (673)
++.+++|++|+|++|.|+ .+|..++.+++|++|+|++|+++ .+|..|+++++|++|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 89999999999999999999999 78999999999999999999999999987765
Q ss_pred ----ccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhhhcc
Q 005859 160 ----LRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 160 ----l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~~ 233 (673)
+++|++|+|++|+++ .+|..++.+++|+.|+|++|++++ +|..+..+++|+.|+|++|++.+.+|..+..+.
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCC
Confidence 999999999999998 889999999999999999999996 566789999999999999999999998876654
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=1.3e-24 Score=253.27 Aligned_cols=112 Identities=36% Similarity=0.628 Sum_probs=66.9
Q ss_pred CCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEc
Q 005859 137 TNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDI 216 (673)
Q Consensus 137 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 216 (673)
++|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..+.++++|++||+
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 44555555555555566666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cCCCCCcCCchh--hhhccCCccccCcccccCCCc
Q 005859 217 RNNSFSGNVPPA--LKRLNGGFQYDNNAALCGTGF 249 (673)
Q Consensus 217 ~~N~l~g~~p~~--l~~~~~~~~~~~n~~~~~~~~ 249 (673)
++|+|+|.+|.. +..+. ...|.+|+.+||.++
T Consensus 712 s~N~l~g~iP~~~~~~~~~-~~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 712 SNNNLSGPIPEMGQFETFP-PAKFLNNPGLCGYPL 745 (768)
T ss_dssp CSSEEEEECCSSSSGGGSC-GGGGCSCTEEESTTS
T ss_pred cCCcccccCCCchhhccCC-HHHhcCCchhcCCCC
Confidence 666666666643 22221 234667888888654
No 259
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=2.2e-24 Score=220.16 Aligned_cols=155 Identities=14% Similarity=0.109 Sum_probs=122.4
Q ss_pred CHHHHHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-----------------CcHHHHHHHHHHHhc
Q 005859 393 NLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-----------------SDEGEFLKGLKILTS 455 (673)
Q Consensus 393 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~ 455 (673)
.+..+......|...+.||+|+||.||+|+..+|+.||||++...... .....+.+|+++|++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 345556666778888999999999999999977999999999653211 123568999999999
Q ss_pred cCCCCceeEeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCC
Q 005859 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535 (673)
Q Consensus 456 l~H~niv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~ 535 (673)
++| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+. ||+||||||
T Consensus 161 l~~---~~v~~~~~~---~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~--giiHrDlkp 221 (282)
T 1zar_A 161 LQG---LAVPKVYAW---EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR--GIVHGDLSQ 221 (282)
T ss_dssp TTT---SSSCCEEEE---ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT--TEECSCCST
T ss_pred ccC---CCcCeEEec---cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC--CCEeCCCCH
Confidence 994 555555432 34689999999999998 531 12346999999999999987 899999999
Q ss_pred CCeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCcccc
Q 005859 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTT 581 (673)
Q Consensus 536 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 581 (673)
+|||++ ++.+||+|||+++.. ..|+|||++.
T Consensus 222 ~NILl~-~~~vkl~DFG~a~~~--------------~~~~a~e~l~ 252 (282)
T 1zar_A 222 YNVLVS-EEGIWIIDFPQSVEV--------------GEEGWREILE 252 (282)
T ss_dssp TSEEEE-TTEEEECCCTTCEET--------------TSTTHHHHHH
T ss_pred HHEEEE-CCcEEEEECCCCeEC--------------CCCCHHHHHH
Confidence 999999 999999999998632 3468888875
No 260
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.89 E-value=8.5e-24 Score=219.64 Aligned_cols=167 Identities=29% Similarity=0.485 Sum_probs=144.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCC-CCcEee
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMT-NLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~ 143 (673)
.+++.|+|++|.++|.+|..|.++++|++|+|++|.+++.+|..|..+++|++|+|++|++++.+|..+.+++ +|+.|+
T Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~ 180 (313)
T 1ogq_A 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180 (313)
T ss_dssp TTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEE
T ss_pred CCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred ccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 144 LCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 144 L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
|++|++++.+|..+..++ |++|++++|.+++.+|..|..+++|+.|+|++|.+++.+|. +..+++|+.|++++|+|+|
T Consensus 181 L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~ 258 (313)
T 1ogq_A 181 ISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYG 258 (313)
T ss_dssp CCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEE
T ss_pred CcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccC
Confidence 999999988888888887 88888888888888888888888888888888887766555 6667777777777777777
Q ss_pred CCchhhhhcc
Q 005859 224 NVPPALKRLN 233 (673)
Q Consensus 224 ~~p~~l~~~~ 233 (673)
.+|..+..+.
T Consensus 259 ~~p~~l~~l~ 268 (313)
T 1ogq_A 259 TLPQGLTQLK 268 (313)
T ss_dssp CCCGGGGGCT
T ss_pred cCChHHhcCc
Confidence 7777766543
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.9e-22 Score=202.51 Aligned_cols=160 Identities=28% Similarity=0.302 Sum_probs=137.2
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 35788888888888888888888899999999999988888888888899999999999988777778888889999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.+.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99988877677788888899999999988876666788888899999999998887777888888899999999988876
No 262
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=2.5e-22 Score=203.94 Aligned_cols=193 Identities=26% Similarity=0.295 Sum_probs=158.7
Q ss_pred CCceEEeCC----------CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDE----------NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~----------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|..|.|.. ...++.|+|++|++++..+..|.++++|++|+|++|.++...+..|..+++|++|+|++|+
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~ 96 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSC
T ss_pred CCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCc
Confidence 466777753 1357889999999987777789999999999999999987777778889999999999999
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCccc
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVK 204 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 204 (673)
+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..
T Consensus 97 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 176 (270)
T 2o6q_A 97 LQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGA 176 (270)
T ss_dssp CCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhH
Confidence 99777778889999999999999999888888899999999999999998766667889999999999999999877778
Q ss_pred ccCCCCCCEEEccCCCCCcCCchhhhhccC--CccccCcccccCC
Q 005859 205 LANVPKLEVLDIRNNSFSGNVPPALKRLNG--GFQYDNNAALCGT 247 (673)
Q Consensus 205 ~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~--~~~~~~n~~~~~~ 247 (673)
|..+++|+.|+|++|++++..+..+..+.. .+.+.+|+..|..
T Consensus 177 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 177 FDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred hccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 888999999999999998766655655432 2445566666653
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.7e-22 Score=201.38 Aligned_cols=187 Identities=24% Similarity=0.295 Sum_probs=162.7
Q ss_pred CCceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCccccc
Q 005859 55 SFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIG 134 (673)
Q Consensus 55 ~w~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 134 (673)
.|.|+.|... ...+++++++++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.
T Consensus 6 ~~~gC~C~~~--~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (251)
T 3m19_A 6 TVTGCTCNEG--KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFD 80 (251)
T ss_dssp HHHSSEEEGG--GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT
T ss_pred CCCceEcCCC--CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhc
Confidence 3899999532 346889999988 5776665 6899999999999999999999999999999999999998888899
Q ss_pred CCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEE
Q 005859 135 NMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVL 214 (673)
Q Consensus 135 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 214 (673)
++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|
T Consensus 81 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 160 (251)
T 3m19_A 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTL 160 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEE
Confidence 99999999999999998888889999999999999999997777778999999999999999998888789999999999
Q ss_pred EccCCCCCcCCchhhhhccC--CccccCcccccC
Q 005859 215 DIRNNSFSGNVPPALKRLNG--GFQYDNNAALCG 246 (673)
Q Consensus 215 ~l~~N~l~g~~p~~l~~~~~--~~~~~~n~~~~~ 246 (673)
+|++|+|++..|..+..+.. .+.+.+|...|.
T Consensus 161 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 161 SLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999887777765543 233455555443
No 264
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2.2e-22 Score=195.98 Aligned_cols=171 Identities=25% Similarity=0.223 Sum_probs=116.2
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|.+|.|+.. .+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 8 ~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 8 SGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 4999999743 246677777777776555556677777777777777776555566677777777777777
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCccc
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVK 204 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 204 (673)
+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~----- 162 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC----- 162 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-----
Confidence 775555556777777777777777776555566677777777777777775555556667777777777776553
Q ss_pred ccCCCCCCEEEccCCCCCcCCchhhhhc
Q 005859 205 LANVPKLEVLDIRNNSFSGNVPPALKRL 232 (673)
Q Consensus 205 ~~~l~~L~~L~l~~N~l~g~~p~~l~~~ 232 (673)
.+++|+.|+++.|+++|.+|..+..+
T Consensus 163 --~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 163 --TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp --CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred --CCCCHHHHHHHHHhCCceeeccCccc
Confidence 34566777777777777777665443
No 265
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.3e-21 Score=198.72 Aligned_cols=180 Identities=27% Similarity=0.323 Sum_probs=160.4
Q ss_pred CCCCCCCCCceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCC
Q 005859 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSG 127 (673)
Q Consensus 48 ~~~C~~~~w~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 127 (673)
.+.|. |.|+.|+..+.++.+++++++++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+++.
T Consensus 2 ~~~C~---~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 75 (270)
T 2o6q_A 2 EALCK---KDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT 75 (270)
T ss_dssp CCCBG---GGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC
T ss_pred CccCC---CCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe
Confidence 46776 99999976666789999999998 4777664 789999999999998888899999999999999999997
Q ss_pred CCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccC
Q 005859 128 KIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLAN 207 (673)
Q Consensus 128 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 207 (673)
..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..
T Consensus 76 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 76 LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccC
Confidence 76777899999999999999999877788899999999999999999888888999999999999999999877777999
Q ss_pred CCCCCEEEccCCCCCcCCchhhhhcc
Q 005859 208 VPKLEVLDIRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 208 l~~L~~L~l~~N~l~g~~p~~l~~~~ 233 (673)
+++|+.|++++|.+++..+..+..+.
T Consensus 156 l~~L~~L~L~~n~l~~~~~~~~~~l~ 181 (270)
T 2o6q_A 156 LTSLKELRLYNNQLKRVPEGAFDKLT 181 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred CcccceeEecCCcCcEeChhHhccCC
Confidence 99999999999999987766665443
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.86 E-value=7.7e-22 Score=206.18 Aligned_cols=166 Identities=23% Similarity=0.390 Sum_probs=137.9
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccC---------
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGN--------- 135 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--------- 135 (673)
.+++.|+|++|.++ .+|..++++++|++|+|++|.|+ .+|..+..+++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 46788888888888 88888888889999999998888 67888888888888888888888888877654
Q ss_pred CCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEE
Q 005859 136 MTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLD 215 (673)
Q Consensus 136 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 215 (673)
+++|++|+|++|+++ .+|..++.+++|++|+|++|.+++ +|..++.+++|+.|+|++|++.+.+|..+.++++|+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 888888888888888 778888888888888888888884 666788888888888888888888888888888888888
Q ss_pred ccCCCCCcCCchhhhhccC
Q 005859 216 IRNNSFSGNVPPALKRLNG 234 (673)
Q Consensus 216 l~~N~l~g~~p~~l~~~~~ 234 (673)
|++|++.+.+|..+..+..
T Consensus 260 L~~n~~~~~~p~~~~~l~~ 278 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQ 278 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTT
T ss_pred CCCCCchhhcchhhhcCCC
Confidence 8888888888877766543
No 267
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.86 E-value=2.1e-21 Score=198.72 Aligned_cols=169 Identities=26% Similarity=0.263 Sum_probs=153.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC-CCCCCcccccCCCCCcEee
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN-LSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~ 143 (673)
..++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|. +....|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 468999999999998888889999999999999999998889999999999999999997 8776688899999999999
Q ss_pred ccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 144 LCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 144 L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
|++|.+++..|..|..+++|++|++++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 99999998888899999999999999999997777779999999999999999997777779999999999999999998
Q ss_pred CCchhhhhcc
Q 005859 224 NVPPALKRLN 233 (673)
Q Consensus 224 ~~p~~l~~~~ 233 (673)
..|..+..+.
T Consensus 192 ~~~~~~~~l~ 201 (285)
T 1ozn_A 192 VHPHAFRDLG 201 (285)
T ss_dssp ECTTTTTTCT
T ss_pred cCHhHccCcc
Confidence 8888776553
No 268
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.86 E-value=2e-21 Score=198.80 Aligned_cols=184 Identities=26% Similarity=0.242 Sum_probs=166.0
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCc-CCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNA-LNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
.+++.|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 578999999999999889999999999999999997 8877789999999999999999999988899999999999999
Q ss_pred ccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 144 LCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 144 L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc
Confidence 99999998777789999999999999999997777779999999999999999999889999999999999999999998
Q ss_pred CCchhhhhccC--CccccCcccccCCC
Q 005859 224 NVPPALKRLNG--GFQYDNNAALCGTG 248 (673)
Q Consensus 224 ~~p~~l~~~~~--~~~~~~n~~~~~~~ 248 (673)
..+..+..+.. .+.+.+|+..|...
T Consensus 216 ~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 216 LPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCHHHcccCcccCEEeccCCCccCCCC
Confidence 77777766543 34556777777654
No 269
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.86 E-value=2.7e-21 Score=191.17 Aligned_cols=166 Identities=27% Similarity=0.333 Sum_probs=147.6
Q ss_pred CCCCCCCCCCCCCCceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccC
Q 005859 43 SWAPNADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNV 122 (673)
Q Consensus 43 ~w~~~~~~C~~~~w~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 122 (673)
-|..+.+.|+ |.+|.|+. +++. .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++
T Consensus 11 ~~~~~~~~Cs---~~~v~c~~-----------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 73 (229)
T 3e6j_A 11 AACPSQCSCS---GTTVDCRS-----------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGS 73 (229)
T ss_dssp CCCCTTCEEE---TTEEECTT-----------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ccCCCCCEEe---CCEeEccC-----------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCC
Confidence 4555678887 99999963 3333 5666553 8999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCc
Q 005859 123 NNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVP 202 (673)
Q Consensus 123 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 202 (673)
|+|+...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+
T Consensus 74 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 74 NQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred CCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH
Confidence 9998776777899999999999999999877788999999999999999999 789999999999999999999998777
Q ss_pred ccccCCCCCCEEEccCCCCCcCCc
Q 005859 203 VKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 203 ~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
..+..+++|+.|+|++|++.+..+
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHhCCCCCCEEEeeCCCccCCcc
Confidence 889999999999999999998765
No 270
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.86 E-value=3e-21 Score=197.96 Aligned_cols=181 Identities=25% Similarity=0.221 Sum_probs=159.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..++.|+|++|.+++..|..|.++++|++|+|++|.|++..+. ..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 5789999999999999999999999999999999999975443 78999999999999998 78889999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|+ .
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ 186 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-T 186 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-C
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-c
Confidence 999999888889999999999999999999877778899999999999999999877777889999999999999999 5
Q ss_pred CchhhhhccC--CccccCcccccCCCc
Q 005859 225 VPPALKRLNG--GFQYDNNAALCGTGF 249 (673)
Q Consensus 225 ~p~~l~~~~~--~~~~~~n~~~~~~~~ 249 (673)
+|..+..... .+.+.+|+..|...+
T Consensus 187 ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 187 IPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred cChhhcccccCCeEEeCCCCccCcCcc
Confidence 6766554332 234567888886543
No 271
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=7.4e-21 Score=186.79 Aligned_cols=155 Identities=19% Similarity=0.219 Sum_probs=141.5
Q ss_pred EEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCC-cccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCc
Q 005859 69 NISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIP-KEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYN 147 (673)
Q Consensus 69 ~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 147 (673)
.+++++|+++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 67777888874 777663 457899999999998865 46899999999999999999888889999999999999999
Q ss_pred cccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCc
Q 005859 148 KLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++.+..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9998888889999999999999999999889999999999999999999999889999999999999999999998765
No 272
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.84 E-value=1.3e-20 Score=191.57 Aligned_cols=160 Identities=26% Similarity=0.287 Sum_probs=138.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..++.|+|++|.+++. +.+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 4688899999988873 47888999999999999998888888888999999999999998777777888999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|++++..|..+..+++|+.|++++|++.+.
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 99999877777788899999999999999877777788889999999999999888777788889999999999998887
Q ss_pred Cc
Q 005859 225 VP 226 (673)
Q Consensus 225 ~p 226 (673)
.|
T Consensus 221 ~~ 222 (272)
T 3rfs_A 221 CP 222 (272)
T ss_dssp TT
T ss_pred Cc
Confidence 76
No 273
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=1.6e-20 Score=184.39 Aligned_cols=152 Identities=24% Similarity=0.323 Sum_probs=137.5
Q ss_pred EEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccc
Q 005859 70 ISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKL 149 (673)
Q Consensus 70 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 149 (673)
+++++++++ .+|..+. ++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 444566665 4666554 7899999999999988888999999999999999999988899999999999999999999
Q ss_pred cccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 150 TGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 150 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
+...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 976667789999999999999999998899999999999999999999998888899999999999999999753
No 274
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.83 E-value=1.6e-20 Score=205.37 Aligned_cols=173 Identities=21% Similarity=0.183 Sum_probs=120.3
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|..|.|... ..++.|+|++|++++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4778888642 368999999999999889999999999999999999998888999999999999999999
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchh-------------------------hcCccccCeecccccccCccCCc
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQ-------------------------LGSLRKLSVLALQYNQLTGAIPA 179 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-------------------------l~~l~~L~~L~l~~N~l~~~~p~ 179 (673)
+++..+..|..+++|++|+|++|+++...+.. |..+++|++|+|++|++++ +|
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-
Confidence 99777777888999999999988887544433 3344444444444444442 22
Q ss_pred cccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhh
Q 005859 180 SLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPAL 229 (673)
Q Consensus 180 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l 229 (673)
.+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 262 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 262 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHh
Confidence 23344444445555555544444445555555555555555544444433
No 275
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.83 E-value=5.7e-20 Score=186.74 Aligned_cols=178 Identities=23% Similarity=0.260 Sum_probs=155.2
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+++++++.. + +.+..+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 568899999999874 3 3588999999999999999973 47999999999999999999888888999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 99999988888899999999999999999987777889999999999999999988888889999999999999999998
Q ss_pred CchhhhhccC--CccccCcccccC
Q 005859 225 VPPALKRLNG--GFQYDNNAALCG 246 (673)
Q Consensus 225 ~p~~l~~~~~--~~~~~~n~~~~~ 246 (673)
.|..+..+.. .+.+.+|...|.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CHHHHhCCcCCCEEEccCCCcccc
Confidence 8776665543 233445554443
No 276
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.83 E-value=1.4e-20 Score=191.72 Aligned_cols=165 Identities=22% Similarity=0.189 Sum_probs=138.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 45889999999998877778899999999999999998887888899999999999999998877788899999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCcc-CCccccCCCcccccccccccCCCCCcccccCCCCCC----EEEccCC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGA-IPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLE----VLDIRNN 219 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~----~L~l~~N 219 (673)
++|.+++..+..+..+++|++|++++|.+++. +|..|..+++|+.|+|++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999877776788899999999999998863 688888899999999999998877776666666665 7788888
Q ss_pred CCCcCCchhh
Q 005859 220 SFSGNVPPAL 229 (673)
Q Consensus 220 ~l~g~~p~~l 229 (673)
++++..+..+
T Consensus 188 ~l~~~~~~~~ 197 (276)
T 2z62_A 188 PMNFIQPGAF 197 (276)
T ss_dssp CCCEECTTSS
T ss_pred cccccCcccc
Confidence 8776555443
No 277
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.82 E-value=4.3e-20 Score=201.14 Aligned_cols=195 Identities=18% Similarity=0.165 Sum_probs=125.0
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|..|.|... ..++.|+|++|++++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 4778888642 357889999999988888888889999999999998888878888888888888888888
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchh-------------------------hcCccccCeeccccccc------
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQ-------------------------LGSLRKLSVLALQYNQL------ 173 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-------------------------l~~l~~L~~L~l~~N~l------ 173 (673)
++...+..|..+++|+.|+|++|+++...+.. |.++++|++|+|++|++
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccccc
Confidence 88666667888888888888888776544333 33344444444444433
Q ss_pred ----------------CccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhhhccC--C
Q 005859 174 ----------------TGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLNG--G 235 (673)
Q Consensus 174 ----------------~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~--~ 235 (673)
++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..+..+.. .
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 283 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 283 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCE
Confidence 3333444444444444444444444444444555555555555555555444443333321 2
Q ss_pred ccccCcccccCCCc
Q 005859 236 FQYDNNAALCGTGF 249 (673)
Q Consensus 236 ~~~~~n~~~~~~~~ 249 (673)
+.+.+|+..|.+..
T Consensus 284 L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 284 IHLHHNPWNCNCDI 297 (440)
T ss_dssp EECCSSCEECSSTT
T ss_pred EEcCCCCccCCCCc
Confidence 33456666666543
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.82 E-value=1.9e-20 Score=193.72 Aligned_cols=180 Identities=22% Similarity=0.291 Sum_probs=121.6
Q ss_pred CEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCC-cccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 66 RVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIP-KEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+..|+|++|.+. .+|..+.++++|++|+|++|.+++..+ ..+..+++|++|++++|.+.+..|..|..+++|++|+|
T Consensus 79 ~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 4556666666665 355556677777777777777765544 46677777777777777777666667777777777777
Q ss_pred cCccccc-cCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 145 CYNKLTG-NIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 145 ~~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
++|.+++ .+|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++++
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 7777765 466677777777777777777776666777777777777777777776666667777777777777777777
Q ss_pred CCchhhhhccC---CccccCcccccC
Q 005859 224 NVPPALKRLNG---GFQYDNNAALCG 246 (673)
Q Consensus 224 ~~p~~l~~~~~---~~~~~~n~~~~~ 246 (673)
..|..+..+.. .+.+.+|...|.
T Consensus 238 ~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 238 SKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCHHHHHhhhccCCEEEccCCCeecc
Confidence 76666554421 223445554444
No 279
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.82 E-value=2.8e-20 Score=192.37 Aligned_cols=178 Identities=20% Similarity=0.223 Sum_probs=150.1
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCc--cCCcccCCCCCCCEEEccC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNG--VIPKEIASLSELSDLYLNV 122 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~ 122 (673)
.|.+|.|+.. ..++.|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++
T Consensus 8 ~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred CCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 4999999753 378999999999995444568999999999999999983 3467777889999999999
Q ss_pred CCCCCCCcccccCCCCCcEeeccCccccccCc-hhhcCccccCeecccccccCccCCccccCCCcccccccccccCCC-C
Q 005859 123 NNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIP-TQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFG-P 200 (673)
Q Consensus 123 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~ 200 (673)
|.+. .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 9988 577778899999999999999986655 578889999999999999988888888889999999999999886 5
Q ss_pred CcccccCCCCCCEEEccCCCCCcCCchhhhhcc
Q 005859 201 VPVKLANVPKLEVLDIRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 201 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~~ 233 (673)
+|..+..+++|+.|++++|.+++..|..+..+.
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 199 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 199 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC
Confidence 778888899999999999999887777776544
No 280
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.81 E-value=2.1e-20 Score=197.51 Aligned_cols=181 Identities=20% Similarity=0.226 Sum_probs=154.1
Q ss_pred CCCCCCCCCCCCCCceEEeCC------------CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccC
Q 005859 43 SWAPNADPCSSDSFDGVACDE------------NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110 (673)
Q Consensus 43 ~w~~~~~~C~~~~w~gv~c~~------------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 110 (673)
.|......|. |.|+ |+. ..+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.
T Consensus 22 ~~~~~~~~C~---~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 22 SSNQASLSCD---RNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp -----CCEEC---TTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred CCCccCCCCC---CCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcC
Confidence 3444455665 8777 542 13789999999999987777899999999999999999998899999
Q ss_pred CCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCc-hhhcCccccCeeccccc-ccCccCCccccCCCccc
Q 005859 111 SLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIP-TQLGSLRKLSVLALQYN-QLTGAIPASLGDLGMLM 188 (673)
Q Consensus 111 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~ 188 (673)
++++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..|..+++|++|++++| .+.+..|..|.++++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 99999999999999997666669999999999999999995444 47899999999999999 47766678899999999
Q ss_pred ccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchh
Q 005859 189 RLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPA 228 (673)
Q Consensus 189 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 228 (673)
.|++++|.+++..|..+..+++|+.|++++|.+.. +|..
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~ 216 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLEI 216 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT-HHHH
T ss_pred EEECCCCCcCccCHHHHhccccCCeecCCCCcccc-chhh
Confidence 99999999999889999999999999999999864 4543
No 281
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.81 E-value=4.9e-20 Score=202.90 Aligned_cols=178 Identities=22% Similarity=0.195 Sum_probs=162.9
Q ss_pred CCceEEeCC----------CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDE----------NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~----------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|..|.|.. ...++.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 477888864 2368899999999999989999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCccc
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVK 204 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 204 (673)
++...+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 99776777999999999999999999999999999999999999999999888889999999999999999999877778
Q ss_pred ccCCCCCCEEEccCCCCCcCCchhhhhc
Q 005859 205 LANVPKLEVLDIRNNSFSGNVPPALKRL 232 (673)
Q Consensus 205 ~~~l~~L~~L~l~~N~l~g~~p~~l~~~ 232 (673)
+.++++|+.|++++|.+.+..+..+..+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l 199 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRL 199 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccC
Confidence 9999999999999999998776665544
No 282
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=1.5e-19 Score=191.45 Aligned_cols=177 Identities=24% Similarity=0.265 Sum_probs=144.8
Q ss_pred EEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccC-CCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCc
Q 005859 69 NISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA-SLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYN 147 (673)
Q Consensus 69 ~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 147 (673)
.+++++++|+. +|..+. +.|+.|+|++|+|++..+..|. .+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 46677777774 666553 4588999999999988888887 8999999999999999877788999999999999999
Q ss_pred cccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccc---cCCCCCCEEEccCCCCCcC
Q 005859 148 KLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKL---ANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~g~ 224 (673)
+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+ ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9998777789999999999999999998888889999999999999999987555555 5688999999999999976
Q ss_pred Cchhhhhcc----CCccccCcccccCCC
Q 005859 225 VPPALKRLN----GGFQYDNNAALCGTG 248 (673)
Q Consensus 225 ~p~~l~~~~----~~~~~~~n~~~~~~~ 248 (673)
.+..+..+. ..+.+.+|+..|...
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCcC
Confidence 666666654 345677888777654
No 283
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.81 E-value=2.9e-20 Score=203.32 Aligned_cols=152 Identities=24% Similarity=0.276 Sum_probs=136.2
Q ss_pred ceEEeCCC---------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccC-CcccCCCCCCCEEEccCCCCC
Q 005859 57 DGVACDEN---------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVI-PKEIASLSELSDLYLNVNNLS 126 (673)
Q Consensus 57 ~gv~c~~~---------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~ 126 (673)
..|.|+.. .+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+++
T Consensus 13 ~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~ 92 (455)
T 3v47_A 13 YNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL 92 (455)
T ss_dssp TEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTC
T ss_pred cccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccC
Confidence 34788642 46899999999999999999999999999999999998655 567999999999999999999
Q ss_pred CCCcccccCCCCCcEeeccCccccccCchh--hcCccccCeecccccccCccCCcc-ccCCCcccccccccccCCCCCcc
Q 005859 127 GKIPSQIGNMTNLQVLQLCYNKLTGNIPTQ--LGSLRKLSVLALQYNQLTGAIPAS-LGDLGMLMRLDLSFNNLFGPVPV 203 (673)
Q Consensus 127 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~ 203 (673)
+..|..|+++++|++|+|++|++++.+|.. |..+++|++|+|++|++++..|.. +.++++|+.|++++|++.+..|.
T Consensus 93 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 172 (455)
T 3v47_A 93 QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEE 172 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTT
T ss_pred ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChh
Confidence 888999999999999999999999866655 999999999999999999887876 89999999999999999998887
Q ss_pred cccCC
Q 005859 204 KLANV 208 (673)
Q Consensus 204 ~~~~l 208 (673)
.+..+
T Consensus 173 ~l~~l 177 (455)
T 3v47_A 173 DLLNF 177 (455)
T ss_dssp TSGGG
T ss_pred hhhcc
Confidence 77654
No 284
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=3.7e-19 Score=173.05 Aligned_cols=162 Identities=23% Similarity=0.297 Sum_probs=143.3
Q ss_pred eEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCC
Q 005859 58 GVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMT 137 (673)
Q Consensus 58 gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 137 (673)
+..|.. +.+++++++++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..++
T Consensus 4 ~C~C~~----~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 76 (208)
T 2o6s_A 4 RCSCSG----TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76 (208)
T ss_dssp TCEEET----TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEECC----CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCC
Confidence 456743 37888888887 455544 46899999999999988888899999999999999999977777789999
Q ss_pred CCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEcc
Q 005859 138 NLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIR 217 (673)
Q Consensus 138 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 217 (673)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+++
T Consensus 77 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 156 (208)
T 2o6s_A 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 156 (208)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEec
Confidence 99999999999998777778999999999999999998777779999999999999999998777778999999999999
Q ss_pred CCCCCcCCc
Q 005859 218 NNSFSGNVP 226 (673)
Q Consensus 218 ~N~l~g~~p 226 (673)
+|++.+..|
T Consensus 157 ~N~~~~~~~ 165 (208)
T 2o6s_A 157 DNPWDCTCP 165 (208)
T ss_dssp SCCBCCCTT
T ss_pred CCCeecCCC
Confidence 999998776
No 285
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.80 E-value=1.8e-19 Score=212.17 Aligned_cols=163 Identities=21% Similarity=0.203 Sum_probs=104.5
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|
T Consensus 290 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 369 (844)
T 3j0a_A 290 KDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDL 369 (844)
T ss_dssp CCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEE
T ss_pred CCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEEC
Confidence 35667777777777777777777777777777777777766777777777777777777777666666777777777777
Q ss_pred cCccccccC------------------c----------------------hhhcCccccCeecccccccCc---------
Q 005859 145 CYNKLTGNI------------------P----------------------TQLGSLRKLSVLALQYNQLTG--------- 175 (673)
Q Consensus 145 ~~N~l~~~~------------------p----------------------~~l~~l~~L~~L~l~~N~l~~--------- 175 (673)
++|.+++.. | ..+..+++|++|+|++|++++
T Consensus 370 s~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 449 (844)
T 3j0a_A 370 RDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE 449 (844)
T ss_dssp ETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS
T ss_pred CCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc
Confidence 666655310 0 012234444444444444432
Q ss_pred ---------------------cCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCch
Q 005859 176 ---------------------AIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPP 227 (673)
Q Consensus 176 ---------------------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 227 (673)
..|..|.++++|+.|+|++|++++.+|..|.++++|+.|+|++|+|++..|.
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 522 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHN 522 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChh
Confidence 1223355667777777777777777777777777777777777777654443
No 286
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=2e-19 Score=203.62 Aligned_cols=161 Identities=19% Similarity=0.171 Sum_probs=118.8
Q ss_pred CcCCCCCCCCCCCC-CCCceEEeCCC-----------------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcC
Q 005859 40 LLTSWAPNADPCSS-DSFDGVACDEN-----------------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNAL 101 (673)
Q Consensus 40 ~l~~w~~~~~~C~~-~~w~gv~c~~~-----------------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l 101 (673)
.+.+|.++.++|.. ..|.++.|+.. ..+..++++++.+....+..|.++++|++|+|++|.|
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCC
Confidence 36788766555532 24777666520 2356677777777665555677788888888888888
Q ss_pred CccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccc
Q 005859 102 NGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASL 181 (673)
Q Consensus 102 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~ 181 (673)
++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 87777788888888888888888887777778888888888888888886555567888888888888888887777778
Q ss_pred cCCCcccccccccccCCCC
Q 005859 182 GDLGMLMRLDLSFNNLFGP 200 (673)
Q Consensus 182 ~~l~~L~~L~l~~N~l~~~ 200 (673)
+.+++|+.|+|++|.+++.
T Consensus 168 ~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp TTCTTCCEEECTTSCCSBC
T ss_pred hcCCcCcEEECcCCCCCCc
Confidence 8888888888888887764
No 287
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=1e-19 Score=183.15 Aligned_cols=147 Identities=14% Similarity=0.091 Sum_probs=109.6
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEE-cCCcE--EEEEEecccCCCC-----------------------cHHHHHH
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGIL-RDGSV--VAVKCIAKTSCKS-----------------------DEGEFLK 448 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~-----------------------~~~~~~~ 448 (673)
..+......|+..+.||+|+||.||+|.. .+|+. ||||+++...... ....+.+
T Consensus 40 ~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (258)
T 1zth_A 40 YKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK 119 (258)
T ss_dssp HHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred HHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence 34433344467788999999999999998 67888 9999875432110 0136789
Q ss_pred HHHHHhccCCCCc--eeEeeEEecCCCCeEEEEEeecCC-C----ChhhhhccccCCccccCHHHHHHHHHHHHHHHHHH
Q 005859 449 GLKILTSLKHENL--ASLRGICCSKGRGECFLIYDFVPN-G----NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYL 521 (673)
Q Consensus 449 E~~~l~~l~H~ni--v~l~~~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yL 521 (673)
|+++|.++.|+++ ...+++ +..++||||+.+ | +|.++... .++..+..++.|++.||+||
T Consensus 120 E~~~l~~l~~~~i~~p~~~~~------~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 120 EFRNLERAKEAGVSVPQPYTY------MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHTTCCCCCEEEE------ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEc------CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHH
Confidence 9999999988864 334332 235899999942 4 56555421 23445678999999999999
Q ss_pred h-cCCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 522 H-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 522 H-~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
| ++ ||+||||||+|||+++ .++|+|||+|....
T Consensus 187 H~~~--givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 187 YQEA--ELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHTS--CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHC--CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9 77 8999999999999998 99999999997653
No 288
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.80 E-value=8.8e-20 Score=207.07 Aligned_cols=183 Identities=21% Similarity=0.222 Sum_probs=130.0
Q ss_pred CEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCC-cccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 66 RVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIP-KEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
++..|+|++|.+++ +|..+..+++|+.|+|++|.+++..| ..+..+++|++|++++|.+++..|..|.++++|++|+|
T Consensus 377 ~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 377 SLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp CCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred cccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 34555555555554 44666677777777777777776666 56777777777777777777777777777777777777
Q ss_pred cCccccc-cCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 145 CYNKLTG-NIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 145 ~~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
++|++++ .+|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++.+|..+.++++|+.|++++|+|+
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~- 534 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE- 534 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-
T ss_pred CCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-
Confidence 7777776 36777777778888888888877777777777788888888888887777777777788888888888877
Q ss_pred CCchhhhhccC---CccccCcccccCCCcc
Q 005859 224 NVPPALKRLNG---GFQYDNNAALCGTGFT 250 (673)
Q Consensus 224 ~~p~~l~~~~~---~~~~~~n~~~~~~~~~ 250 (673)
.+|..+..+.. .+.+.+|+..|.....
T Consensus 535 ~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 535 TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 46665655432 2345667777765543
No 289
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.80 E-value=2.1e-19 Score=204.75 Aligned_cols=157 Identities=22% Similarity=0.232 Sum_probs=97.1
Q ss_pred cCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCcccccc
Q 005859 73 QGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGN 152 (673)
Q Consensus 73 ~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 152 (673)
++.+|+ .+|..+. +++++|||++|+|++..|..|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++.
T Consensus 39 ~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l 115 (635)
T 4g8a_A 39 MELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 115 (635)
T ss_dssp TTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCC
Confidence 344444 3454332 3566666666666666566666666666666666666655555666666666666666666655
Q ss_pred CchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCC-CcccccCCCCCCEEEccCCCCCcCCchhhhh
Q 005859 153 IPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGP-VPVKLANVPKLEVLDIRNNSFSGNVPPALKR 231 (673)
Q Consensus 153 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~ 231 (673)
.+..|.++++|++|+|++|++++..+..|+++++|+.|+|++|.+++. +|..+..+++|+.|++++|+|++..|..+..
T Consensus 116 ~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 195 (635)
T 4g8a_A 116 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 195 (635)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred CHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccc
Confidence 555666666666666666666655555566666666666666666542 4555666666666666666666666655544
Q ss_pred c
Q 005859 232 L 232 (673)
Q Consensus 232 ~ 232 (673)
+
T Consensus 196 L 196 (635)
T 4g8a_A 196 L 196 (635)
T ss_dssp H
T ss_pred h
Confidence 3
No 290
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.79 E-value=1.2e-19 Score=198.46 Aligned_cols=162 Identities=20% Similarity=0.232 Sum_probs=145.0
Q ss_pred CCEEEEEecCCCcccccCccccC---------------------------------------CCCCCeEeCcCCcCCccC
Q 005859 65 GRVANISLQGKGLSGEIPAAVGG---------------------------------------LKSLTGLYLHFNALNGVI 105 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~---------------------------------------l~~L~~L~L~~N~l~~~~ 105 (673)
..++.|+|++|.+++.+|..+.. .++|++|+|++|.+++.+
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 291 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL 291 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccc
Confidence 36888999999888766654432 268999999999999999
Q ss_pred CcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCC
Q 005859 106 PKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLG 185 (673)
Q Consensus 106 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 185 (673)
|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..++
T Consensus 292 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 371 (455)
T 3v47_A 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLP 371 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccc
Confidence 99999999999999999999988888999999999999999999988889999999999999999999988899999999
Q ss_pred cccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCc
Q 005859 186 MLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 186 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
+|+.|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 372 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 372 NLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999999998777778899999999999999999888
No 291
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.79 E-value=1e-19 Score=181.08 Aligned_cols=172 Identities=17% Similarity=0.221 Sum_probs=146.9
Q ss_pred eEEeCC-------CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCc-CCccCCcccCCCCCCCEEEccC-CCCCCC
Q 005859 58 GVACDE-------NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNA-LNGVIPKEIASLSELSDLYLNV-NNLSGK 128 (673)
Q Consensus 58 gv~c~~-------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~ 128 (673)
.|.|.. ...++.|+|++|++++..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |++++.
T Consensus 17 ~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i 96 (239)
T 2xwt_C 17 RVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI 96 (239)
T ss_dssp EEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE
T ss_pred eeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc
Confidence 455853 3478999999999998888899999999999999997 8887777899999999999998 999977
Q ss_pred CcccccCCCCCcEeeccCccccccCchhhcCccccC---eeccccc-ccCccCCccccCCCccc-ccccccccCCCCCcc
Q 005859 129 IPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLS---VLALQYN-QLTGAIPASLGDLGMLM-RLDLSFNNLFGPVPV 203 (673)
Q Consensus 129 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~---~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~ 203 (673)
.+..|.++++|++|+|++|++++ +|. |..+++|+ +|++++| .+++..+..|..+++|+ .|++++|+++...+.
T Consensus 97 ~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~ 174 (239)
T 2xwt_C 97 DPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGY 174 (239)
T ss_dssp CTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTT
T ss_pred CHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHh
Confidence 77889999999999999999996 676 88888898 9999999 99877777899999999 999999999843333
Q ss_pred cccCCCCCCEEEccCCC-CCcCCchhhhhc
Q 005859 204 KLANVPKLEVLDIRNNS-FSGNVPPALKRL 232 (673)
Q Consensus 204 ~~~~l~~L~~L~l~~N~-l~g~~p~~l~~~ 232 (673)
.+.. ++|+.|++++|+ +++..+..+..+
T Consensus 175 ~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l 203 (239)
T 2xwt_C 175 AFNG-TKLDAVYLNKNKYLTVIDKDAFGGV 203 (239)
T ss_dssp TTTT-CEEEEEECTTCTTCCEECTTTTTTC
T ss_pred hcCC-CCCCEEEcCCCCCcccCCHHHhhcc
Confidence 4444 899999999995 886656666554
No 292
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=8.1e-20 Score=193.53 Aligned_cols=170 Identities=24% Similarity=0.238 Sum_probs=150.3
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCcccc-CCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVG-GLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVN 123 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 123 (673)
.+..|.|... ..++.|+|++|.|++..+..+. ++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 19 ~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 19 ASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp ETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 3778888642 3578999999999998888887 9999999999999999988899999999999999999
Q ss_pred CCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccc---cCCCcccccccccccCCCC
Q 005859 124 NLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASL---GDLGMLMRLDLSFNNLFGP 200 (673)
Q Consensus 124 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~ 200 (673)
+|++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9998878889999999999999999999889999999999999999999996444445 6799999999999999987
Q ss_pred CcccccCCCC--CCEEEccCCCCCcC
Q 005859 201 VPVKLANVPK--LEVLDIRNNSFSGN 224 (673)
Q Consensus 201 ~p~~~~~l~~--L~~L~l~~N~l~g~ 224 (673)
.+..+..++. |+.|+|++|++...
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CHHHhhhccHhhcceEEecCCCccCC
Confidence 7777888887 48899999999853
No 293
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=3.4e-19 Score=174.87 Aligned_cols=145 Identities=23% Similarity=0.279 Sum_probs=134.5
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|..|.|... ..++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 12 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp ETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred CCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4889999642 368999999999998888899999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCC
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFG 199 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 199 (673)
|+...+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 997766778999999999999999999989999999999999999999998888889999999999999999864
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.79 E-value=6.6e-19 Score=184.32 Aligned_cols=169 Identities=24% Similarity=0.350 Sum_probs=129.0
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|..+.|... ..++.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 4999999642 368999999999998888899999999999999999999989999999999999999999
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccC--ccCCccccCCCcccccccccccCCCCCc
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLT--GAIPASLGDLGMLMRLDLSFNNLFGPVP 202 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~p 202 (673)
++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..+..+ +|+.|++++|++++ +|
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 98 5666554 78888888888888766667888888888888888885 3566666665 56666666555553 33
Q ss_pred ccccCCCCCCEEEccCCCCCcCCchhhh
Q 005859 203 VKLANVPKLEVLDIRNNSFSGNVPPALK 230 (673)
Q Consensus 203 ~~~~~l~~L~~L~l~~N~l~g~~p~~l~ 230 (673)
..+. ++|+.|++++|.+++..|..+.
T Consensus 189 ~~~~--~~L~~L~l~~n~i~~~~~~~l~ 214 (332)
T 2ft3_A 189 KDLP--ETLNELHLDHNKIQAIELEDLL 214 (332)
T ss_dssp SSSC--SSCSCCBCCSSCCCCCCTTSST
T ss_pred cccc--CCCCEEECCCCcCCccCHHHhc
Confidence 3222 4455555555555554444443
No 295
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.79 E-value=1.3e-19 Score=213.31 Aligned_cols=180 Identities=19% Similarity=0.168 Sum_probs=157.3
Q ss_pred CCCCCCCceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccC-CcccCCCCCCCEEEccCCCCCCC
Q 005859 50 PCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVI-PKEIASLSELSDLYLNVNNLSGK 128 (673)
Q Consensus 50 ~C~~~~w~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~ 128 (673)
.|+..+|..|++ ...+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++.
T Consensus 10 dcs~~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~ 88 (844)
T 3j0a_A 10 FYRFCNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL 88 (844)
T ss_dssp EESCCCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE
T ss_pred EccCCCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc
Confidence 466667999998 7789999999999999999999999999999999999766666 78899999999999999999988
Q ss_pred CcccccCCCCCcEeeccCccccccCchh--hcCccccCeecccccccCccCC-ccccCCCcccccccccccCCCCCcccc
Q 005859 129 IPSQIGNMTNLQVLQLCYNKLTGNIPTQ--LGSLRKLSVLALQYNQLTGAIP-ASLGDLGMLMRLDLSFNNLFGPVPVKL 205 (673)
Q Consensus 129 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~ 205 (673)
.|..|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|+.|+|++|.+++..|..+
T Consensus 89 ~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 89 HPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp CTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred CHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 8999999999999999999999877765 8999999999999999987655 579999999999999999998888887
Q ss_pred cCC--CCCCEEEccCCCCCcCCchhhh
Q 005859 206 ANV--PKLEVLDIRNNSFSGNVPPALK 230 (673)
Q Consensus 206 ~~l--~~L~~L~l~~N~l~g~~p~~l~ 230 (673)
..+ ++|+.|++++|.+.+..|..+.
T Consensus 169 ~~l~~~~L~~L~L~~n~l~~~~~~~~~ 195 (844)
T 3j0a_A 169 EPLQGKTLSFFSLAANSLYSRVSVDWG 195 (844)
T ss_dssp HHHHHCSSCCCEECCSBSCCCCCCCCC
T ss_pred ccccCCccceEECCCCccccccccchh
Confidence 766 7788888888888777665543
No 296
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=174.84 Aligned_cols=148 Identities=19% Similarity=0.206 Sum_probs=135.8
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccC-ccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIP-AAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVN 123 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 123 (673)
.|..+.|+.. ..++.|+|++|.+++..| ..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 12 EGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4888888642 257899999999998866 45899999999999999999988889999999999999999
Q ss_pred CCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCc
Q 005859 124 NLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVP 202 (673)
Q Consensus 124 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 202 (673)
++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+....+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9998888889999999999999999999999999999999999999999999889999999999999999999986543
No 297
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.79 E-value=1.8e-19 Score=205.27 Aligned_cols=166 Identities=23% Similarity=0.194 Sum_probs=149.3
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..++.|+|++|.|++..|.+|.++++|++|+|++|+|++..|+.|.+|++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999888889999999999999999999988899999999999999999999877788999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCc-cCCccccCCCcccccccccccCCCCCcccccCCCCC----CEEEccCC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTG-AIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKL----EVLDIRNN 219 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L----~~L~l~~N 219 (673)
++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|+.|+|++|++++..|..+..+.++ ..++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999998777789999999999999999976 468889999999999999999999888877655543 47899999
Q ss_pred CCCcCCchhhh
Q 005859 220 SFSGNVPPALK 230 (673)
Q Consensus 220 ~l~g~~p~~l~ 230 (673)
.+....|..+.
T Consensus 212 ~l~~i~~~~~~ 222 (635)
T 4g8a_A 212 PMNFIQPGAFK 222 (635)
T ss_dssp CCCEECTTTTT
T ss_pred cccccCccccc
Confidence 99876665543
No 298
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.79 E-value=1.9e-19 Score=204.26 Aligned_cols=166 Identities=23% Similarity=0.219 Sum_probs=148.8
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999999988889999999999999999999988999999999999999999999888999999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCc-cCCccccCCCcccccccccccCCCCCcccccCCCCCC----EEEccCC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTG-AIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLE----VLDIRNN 219 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~----~L~l~~N 219 (673)
++|++++..|..++.+++|++|++++|.+++ .+|..|+++++|+.|++++|++++..|..+..+.+|+ .|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999998777889999999999999999986 5799999999999999999999988887777666554 7999999
Q ss_pred CCCcCCchhhh
Q 005859 220 SFSGNVPPALK 230 (673)
Q Consensus 220 ~l~g~~p~~l~ 230 (673)
++++..+..+.
T Consensus 192 ~l~~~~~~~~~ 202 (606)
T 3vq2_A 192 PIDFIQDQAFQ 202 (606)
T ss_dssp CCCEECTTTTT
T ss_pred CcceeCccccc
Confidence 98876555443
No 299
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.79 E-value=7.1e-20 Score=189.92 Aligned_cols=163 Identities=21% Similarity=0.200 Sum_probs=120.1
Q ss_pred CCEEEEEecCCCcccccCccc--cCCCCCCeEeCcCCcCCccCCcccCCC-----CCCCEEEccCCCCCCCCcccccCCC
Q 005859 65 GRVANISLQGKGLSGEIPAAV--GGLKSLTGLYLHFNALNGVIPKEIASL-----SELSDLYLNVNNLSGKIPSQIGNMT 137 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~ 137 (673)
.+++.|+|++|.++|.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 357778888888888887765 7788888888888888876 6666666 7888888888888877777888888
Q ss_pred CCcEeeccCcccccc--Cchhh--cCccccCeecccccccCc--cCC-ccccCCCcccccccccccCCCCCc-ccccCCC
Q 005859 138 NLQVLQLCYNKLTGN--IPTQL--GSLRKLSVLALQYNQLTG--AIP-ASLGDLGMLMRLDLSFNNLFGPVP-VKLANVP 209 (673)
Q Consensus 138 ~L~~L~L~~N~l~~~--~p~~l--~~l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~ 209 (673)
+|++|+|++|++.+. +|..+ ..+++|++|+|++|++++ .++ ..+..+++|+.|+|++|++++.+| ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 888888888887664 23344 777888888888888873 222 234567788888888888877664 3455677
Q ss_pred CCCEEEccCCCCCcCCchhh
Q 005859 210 KLEVLDIRNNSFSGNVPPAL 229 (673)
Q Consensus 210 ~L~~L~l~~N~l~g~~p~~l 229 (673)
+|+.|+|++|+|+ .+|..+
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSC
T ss_pred CCCEEECCCCccC-hhhhhc
Confidence 8888888888887 566544
No 300
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.78 E-value=4.9e-19 Score=200.92 Aligned_cols=181 Identities=22% Similarity=0.222 Sum_probs=113.1
Q ss_pred CEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcc-cCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 66 RVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKE-IASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
+++.|++++|.+.+..|..|..+++|++|+|++|.+++..|.. +..+++|+.|++++|.+++..|..|..+++|+.|+|
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 456 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNL 456 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEEC
Confidence 4556666666666666666666666666666666666554433 566666666666666666666666666666666666
Q ss_pred cCcccccc---CchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCC
Q 005859 145 CYNKLTGN---IPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSF 221 (673)
Q Consensus 145 ~~N~l~~~---~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 221 (673)
++|++++. .+..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..|..+.++++| .|++++|++
T Consensus 457 ~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 457 QGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp TTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCC
T ss_pred CCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcc
Confidence 66666552 22456666666666666666666666666666666666666666666666666666666 666666666
Q ss_pred CcCCchhhhhccC--CccccCcccccCC
Q 005859 222 SGNVPPALKRLNG--GFQYDNNAALCGT 247 (673)
Q Consensus 222 ~g~~p~~l~~~~~--~~~~~~n~~~~~~ 247 (673)
++.+|..+..+.. .+.+.+|+..|..
T Consensus 536 ~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 536 SIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred cccCHhhcccCCCCCEEeCCCCCccccC
Confidence 6666655554432 2334555555543
No 301
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.78 E-value=1.6e-19 Score=202.46 Aligned_cols=163 Identities=18% Similarity=0.169 Sum_probs=145.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..|+.|..+++|++|+|++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 36899999999999988999999999999999999999988899999999999999999999888888999999999999
Q ss_pred cCccccc-cCchhhcCccccCeecccccccCccCC-ccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCC
Q 005859 145 CYNKLTG-NIPTQLGSLRKLSVLALQYNQLTGAIP-ASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 145 ~~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 222 (673)
++|++++ ..|..++++++|++|++++|.+.+.+| ..|.++++|+.|++++|.+++.+|..+..+++|+.|++++|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 9999986 467789999999999999998555555 57999999999999999999989999999999999999998875
Q ss_pred cCCchh
Q 005859 223 GNVPPA 228 (673)
Q Consensus 223 g~~p~~ 228 (673)
.+|..
T Consensus 186 -~~~~~ 190 (549)
T 2z81_A 186 -FLLEI 190 (549)
T ss_dssp -THHHH
T ss_pred -ccchh
Confidence 34443
No 302
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.78 E-value=3.1e-19 Score=202.50 Aligned_cols=175 Identities=17% Similarity=0.111 Sum_probs=159.4
Q ss_pred CceEEeCC----------CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCC
Q 005859 56 FDGVACDE----------NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNL 125 (673)
Q Consensus 56 w~gv~c~~----------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 125 (673)
+..|.|.. +..++.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 55677853 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccc
Q 005859 126 SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKL 205 (673)
Q Consensus 126 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 205 (673)
++..|..|+++++|++|+|++|++++..|..|+.+++|++|++++|.+++..+..+..+++|+.|++++|.+++..|..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 99889999999999999999999998778889999999999999999997544455569999999999999998888899
Q ss_pred cCCCCCC--EEEccCCCCCcCCchhhh
Q 005859 206 ANVPKLE--VLDIRNNSFSGNVPPALK 230 (673)
Q Consensus 206 ~~l~~L~--~L~l~~N~l~g~~p~~l~ 230 (673)
..+++|+ .|++++|.+++..|..+.
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~ 200 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFD 200 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTT
T ss_pred hhhcccceeEEecCCCccCccChhHhh
Confidence 9999999 999999999998887664
No 303
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.78 E-value=6.3e-19 Score=188.75 Aligned_cols=160 Identities=19% Similarity=0.170 Sum_probs=118.4
Q ss_pred cCCCCCCCCCCCC-CCCceEEeCC-----------------CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCC
Q 005859 41 LTSWAPNADPCSS-DSFDGVACDE-----------------NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALN 102 (673)
Q Consensus 41 l~~w~~~~~~C~~-~~w~gv~c~~-----------------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~ 102 (673)
+++|..+.++|.. ..|.++.|+. -..++.++++++.+....+..|..+++|++|+|++|.++
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc
Confidence 5678766565542 2355555541 135677888888877544445788888888888888888
Q ss_pred ccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCcccc
Q 005859 103 GVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLG 182 (673)
Q Consensus 103 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~ 182 (673)
+..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|+++...+..|..+++|++|++++|.+++..|..|.
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 87777888888888888888888887778888888888888888888854445568888888888888888877777788
Q ss_pred CCCcccccccccccCCCC
Q 005859 183 DLGMLMRLDLSFNNLFGP 200 (673)
Q Consensus 183 ~l~~L~~L~l~~N~l~~~ 200 (673)
.+++|+.|++++|++++.
T Consensus 163 ~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp SCTTCCEEECCSSCCSBC
T ss_pred CCCCCCEEECCCCcCCcc
Confidence 888888888888888754
No 304
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.78 E-value=9e-19 Score=179.47 Aligned_cols=164 Identities=27% Similarity=0.323 Sum_probs=145.3
Q ss_pred CCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEe
Q 005859 63 ENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVL 142 (673)
Q Consensus 63 ~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 142 (673)
....++.+++++++++ .+|..+. ++|+.|+|++|.|++..|..|..+++|++|+|++|.+++. |.. +.+++|++|
T Consensus 8 ~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L 82 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTL 82 (290)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEE
T ss_pred ccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEE
Confidence 3456888999999998 5676664 7899999999999999999999999999999999999954 443 889999999
Q ss_pred eccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCC
Q 005859 143 QLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 143 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 222 (673)
+|++|+++ .+|..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+|+
T Consensus 83 ~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred ECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 99999999 68889999999999999999999877788999999999999999999888888899999999999999999
Q ss_pred cCCchhhhhc
Q 005859 223 GNVPPALKRL 232 (673)
Q Consensus 223 g~~p~~l~~~ 232 (673)
+..+..+..+
T Consensus 162 ~l~~~~~~~l 171 (290)
T 1p9a_G 162 ELPAGLLNGL 171 (290)
T ss_dssp CCCTTTTTTC
T ss_pred ccCHHHhcCc
Confidence 7655555444
No 305
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.78 E-value=4.5e-19 Score=204.10 Aligned_cols=169 Identities=22% Similarity=0.207 Sum_probs=155.3
Q ss_pred CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 64 NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 64 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
..+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35799999999999998888899999999999999999999999999999999999999999976666899999999999
Q ss_pred ccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCccccc--CCCCCCEEEccCCCC
Q 005859 144 LCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLA--NVPKLEVLDIRNNSF 221 (673)
Q Consensus 144 L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~l~~N~l 221 (673)
|++|++++..|..|+.+++|++|+|++|.+++..|..++++++|+.|++++|.+++..+..+. .+++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988888999999999999999999999899999999999999999999988777654 568999999999999
Q ss_pred CcCCchhhhhc
Q 005859 222 SGNVPPALKRL 232 (673)
Q Consensus 222 ~g~~p~~l~~~ 232 (673)
++..|..+..+
T Consensus 184 ~~~~~~~~~~l 194 (680)
T 1ziw_A 184 KEFSPGCFHAI 194 (680)
T ss_dssp CCBCTTGGGGS
T ss_pred cccChhhhhhh
Confidence 99888877654
No 306
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.78 E-value=8.2e-20 Score=208.14 Aligned_cols=163 Identities=22% Similarity=0.418 Sum_probs=153.8
Q ss_pred CCEEEEEecCCCcccc-----------------cCcccc--CCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC-
Q 005859 65 GRVANISLQGKGLSGE-----------------IPAAVG--GLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN- 124 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~- 124 (673)
.+++.|+|++|.++|. +|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 5789999999999997 999999 99999999999999999999999999999999999998
Q ss_pred CCC-CCcccccCC------CCCcEeeccCccccccCch--hhcCccccCeecccccccCccCCccccCCCcccccccccc
Q 005859 125 LSG-KIPSQIGNM------TNLQVLQLCYNKLTGNIPT--QLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFN 195 (673)
Q Consensus 125 l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 195 (673)
++| .+|..++++ ++|++|+|++|+++ .+|. .++.+++|++|++++|+++|.+| .|+.+++|+.|+|++|
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYN 363 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSS
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCC
Confidence 998 899999887 99999999999999 8998 99999999999999999999999 8999999999999999
Q ss_pred cCCCCCcccccCCCC-CCEEEccCCCCCcCCchhhhh
Q 005859 196 NLFGPVPVKLANVPK-LEVLDIRNNSFSGNVPPALKR 231 (673)
Q Consensus 196 ~l~~~~p~~~~~l~~-L~~L~l~~N~l~g~~p~~l~~ 231 (673)
+++ .+|..+..+++ |+.|++++|.++ .+|..+..
T Consensus 364 ~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~ 398 (636)
T 4eco_A 364 QIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA 398 (636)
T ss_dssp EEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT
T ss_pred ccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhh
Confidence 999 78888999999 999999999999 78876543
No 307
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.77 E-value=1.4e-18 Score=176.83 Aligned_cols=182 Identities=21% Similarity=0.230 Sum_probs=152.6
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|++++|++++..+..++++++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 57889999999999888888999999999999999999888899999999999999999999877778999999999999
Q ss_pred cCcccccc-CchhhcCccccCeecccccccCccCCccccCCCccc----ccccccccCCCCCcccccCCCCCCEEEccCC
Q 005859 145 CYNKLTGN-IPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLM----RLDLSFNNLFGPVPVKLANVPKLEVLDIRNN 219 (673)
Q Consensus 145 ~~N~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 219 (673)
++|++++. +|..|..+++|++|+|++|++++..+..+..+.+|+ .|++++|.+++..+..+. ..+|+.|++++|
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n 210 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTN 210 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSS
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCC
Confidence 99999874 689999999999999999999987777787777777 788999999866555554 458999999999
Q ss_pred CCCcCCchhhhhccC--CccccCcccccCC
Q 005859 220 SFSGNVPPALKRLNG--GFQYDNNAALCGT 247 (673)
Q Consensus 220 ~l~g~~p~~l~~~~~--~~~~~~n~~~~~~ 247 (673)
++++..+..+..+.. .+.+.+|+..|..
T Consensus 211 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 211 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred ceeecCHhHhcccccccEEEccCCcccccC
Confidence 998766655555543 3445677766654
No 308
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.77 E-value=2e-18 Score=180.41 Aligned_cols=172 Identities=24% Similarity=0.346 Sum_probs=138.3
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|+.+.|... ..++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+
T Consensus 32 ~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp ETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred CCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 4899999642 368899999999998888899999999999999999999889999999999999999999
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCc--cCCccccCCCcccccccccccCCCCCc
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTG--AIPASLGDLGMLMRLDLSFNNLFGPVP 202 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p 202 (673)
++ .+|..+. ++|+.|++++|++++..+..|..+++|++|++++|.+.. ..+..+..+++|+.|++++|.++. +|
T Consensus 112 l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~ 187 (330)
T 1xku_A 112 LK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IP 187 (330)
T ss_dssp CS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CC
T ss_pred CC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CC
Confidence 98 5666554 688888888888887777778888888888888888853 566777778888888887777764 44
Q ss_pred ccccCCCCCCEEEccCCCCCcCCchhhhhc
Q 005859 203 VKLANVPKLEVLDIRNNSFSGNVPPALKRL 232 (673)
Q Consensus 203 ~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~ 232 (673)
..+. ++|+.|++++|.+++..|..+..+
T Consensus 188 ~~~~--~~L~~L~l~~n~l~~~~~~~~~~l 215 (330)
T 1xku_A 188 QGLP--PSLTELHLDGNKITKVDAASLKGL 215 (330)
T ss_dssp SSCC--TTCSEEECTTSCCCEECTGGGTTC
T ss_pred cccc--ccCCEEECCCCcCCccCHHHhcCC
Confidence 4332 667777777777777666666544
No 309
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=9.3e-19 Score=168.68 Aligned_cols=152 Identities=19% Similarity=0.302 Sum_probs=133.4
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|++++|+++ .+| .+..+++|++|+|++|.++ .++.+..+++|++|++++|++++..|..|+.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 46889999999998 666 6999999999999999776 3457999999999999999999888999999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
++|++++..|..+..+++|++|++++|.+.+.+| .+..+++|+.|++++|.+++. + .+..+++|+.|++++|++.+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC----
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccCC
Confidence 9999998889999999999999999998333566 689999999999999999874 3 68899999999999999864
No 310
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.77 E-value=7.2e-19 Score=197.92 Aligned_cols=168 Identities=23% Similarity=0.190 Sum_probs=153.9
Q ss_pred CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 64 NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 64 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
..+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 45789999999999998888999999999999999999998889999999999999999999988889999999999999
Q ss_pred ccCccccccCchhhcCccccCeecccccccCc-cCCccccCCCcccccccccccCCCCCcccccCCCCC----CEEEccC
Q 005859 144 LCYNKLTGNIPTQLGSLRKLSVLALQYNQLTG-AIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKL----EVLDIRN 218 (673)
Q Consensus 144 L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L----~~L~l~~ 218 (673)
+++|++++..+..++.+++|++|++++|.+++ .+|..|+++++|+.|++++|++++..|..+..+++| ..|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 99999997666679999999999999999987 479999999999999999999998888888888888 8999999
Q ss_pred CCCCcCCchhhhh
Q 005859 219 NSFSGNVPPALKR 231 (673)
Q Consensus 219 N~l~g~~p~~l~~ 231 (673)
|.+.+..|..+..
T Consensus 187 n~l~~~~~~~~~~ 199 (570)
T 2z63_A 187 NPMNFIQPGAFKE 199 (570)
T ss_dssp CCCCEECTTTTTT
T ss_pred CCceecCHHHhcc
Confidence 9999888776654
No 311
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.76 E-value=3.3e-19 Score=196.36 Aligned_cols=159 Identities=25% Similarity=0.255 Sum_probs=112.2
Q ss_pred CEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCC-------------------C
Q 005859 66 RVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNL-------------------S 126 (673)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l-------------------~ 126 (673)
+++.|+|++|++++..|..|.++++|++|+|++|.+++.+| |..+++|++|+|++|.+ +
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 45666666666666555566666666666666666665444 55555555555555544 3
Q ss_pred CCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCcccc-CCCcccccccccccCCCCCcccc
Q 005859 127 GKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLG-DLGMLMRLDLSFNNLFGPVPVKL 205 (673)
Q Consensus 127 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~ 205 (673)
+..+ ..+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++.+|..+. .+++|+.|+|++|.+++..+ +
T Consensus 113 ~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~ 187 (487)
T 3oja_A 113 RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--Q 187 (487)
T ss_dssp CEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--C
T ss_pred CCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--c
Confidence 3222 2357788888888888888888888888999999999999888887775 78889999999998886532 3
Q ss_pred cCCCCCCEEEccCCCCCcCCchhhhhc
Q 005859 206 ANVPKLEVLDIRNNSFSGNVPPALKRL 232 (673)
Q Consensus 206 ~~l~~L~~L~l~~N~l~g~~p~~l~~~ 232 (673)
..+++|+.|+|++|.|++..|. +..+
T Consensus 188 ~~l~~L~~L~Ls~N~l~~~~~~-~~~l 213 (487)
T 3oja_A 188 VVFAKLKTLDLSSNKLAFMGPE-FQSA 213 (487)
T ss_dssp CCCTTCCEEECCSSCCCEECGG-GGGG
T ss_pred ccCCCCCEEECCCCCCCCCCHh-HcCC
Confidence 4588889999999988875443 5544
No 312
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=3.6e-19 Score=207.07 Aligned_cols=162 Identities=20% Similarity=0.329 Sum_probs=151.3
Q ss_pred CCEEEEEecCCCccc-----------------ccCcccc--CCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC-
Q 005859 65 GRVANISLQGKGLSG-----------------EIPAAVG--GLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN- 124 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~- 124 (673)
.+++.|+|++|.|+| .+|..++ +|++|++|+|++|.+.+.+|..|+++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 578999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred CCC-CCcccccCCC-------CCcEeeccCccccccCch--hhcCccccCeecccccccCccCCccccCCCccccccccc
Q 005859 125 LSG-KIPSQIGNMT-------NLQVLQLCYNKLTGNIPT--QLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSF 194 (673)
Q Consensus 125 l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 194 (673)
++| .+|..|++++ +|+.|+|++|+++ .+|. .|+.+++|+.|+|++|.++ .+| .|+.+++|+.|+|++
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDY 604 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCS
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcC
Confidence 998 8998877766 9999999999999 8898 9999999999999999999 888 899999999999999
Q ss_pred ccCCCCCcccccCCCC-CCEEEccCCCCCcCCchhhhh
Q 005859 195 NNLFGPVPVKLANVPK-LEVLDIRNNSFSGNVPPALKR 231 (673)
Q Consensus 195 N~l~~~~p~~~~~l~~-L~~L~l~~N~l~g~~p~~l~~ 231 (673)
|+++ .+|..+.++++ |+.|+|++|+|+ .+|..+..
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~ 640 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNA 640 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCT
T ss_pred Cccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhc
Confidence 9999 78988999999 999999999999 78876544
No 313
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.76 E-value=1.3e-18 Score=191.61 Aligned_cols=165 Identities=22% Similarity=0.232 Sum_probs=152.0
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++.+..|..|.++++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 57899999999999999999999999999999999999877778999999999999999999888999999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|.+++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|.+.+..+..+..+++|+.|++++|++.+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 99999998899999999999999999999977667799999999999999999988888899999999999999888877
Q ss_pred Cchhh
Q 005859 225 VPPAL 229 (673)
Q Consensus 225 ~p~~l 229 (673)
+|...
T Consensus 216 ~~~~~ 220 (477)
T 2id5_A 216 MTPNC 220 (477)
T ss_dssp ECTTT
T ss_pred cCccc
Confidence 77654
No 314
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.76 E-value=7.4e-19 Score=182.09 Aligned_cols=162 Identities=19% Similarity=0.152 Sum_probs=138.6
Q ss_pred CEEEEEecCCCcccccCccc--cCCCCCCeEeCcCCcCCccCC----cccCCCCCCCEEEccCCCCCCCCcccccCCCCC
Q 005859 66 RVANISLQGKGLSGEIPAAV--GGLKSLTGLYLHFNALNGVIP----KEIASLSELSDLYLNVNNLSGKIPSQIGNMTNL 139 (673)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 139 (673)
+++.|+|++|.+++.+|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 48899999999999999988 999999999999999998666 455689999999999999998888999999999
Q ss_pred cEeeccCcccccc--C--chhhcCccccCeecccccccCccCCc----cccCCCcccccccccccCCCCCcccccCC---
Q 005859 140 QVLQLCYNKLTGN--I--PTQLGSLRKLSVLALQYNQLTGAIPA----SLGDLGMLMRLDLSFNNLFGPVPVKLANV--- 208 (673)
Q Consensus 140 ~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~~~~l--- 208 (673)
++|+|++|++.+. + +..+..+++|++|+|++|+++. +|. .+..+++|++|+|++|++.+..|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999998753 2 2334789999999999999973 333 25788999999999999998888777776
Q ss_pred CCCCEEEccCCCCCcCCchhh
Q 005859 209 PKLEVLDIRNNSFSGNVPPAL 229 (673)
Q Consensus 209 ~~L~~L~l~~N~l~g~~p~~l 229 (673)
++|+.|+|++|+|+ .+|..+
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~ 270 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGL 270 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCC
T ss_pred CcCCEEECCCCCCC-chhhhh
Confidence 69999999999999 667654
No 315
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.76 E-value=4.4e-18 Score=195.75 Aligned_cols=184 Identities=22% Similarity=0.268 Sum_probs=136.9
Q ss_pred CCEEEEEecCCCcccccC-ccccCCCCCCeEeCcCCcCCc--------------------------cCCcccCCCCCCCE
Q 005859 65 GRVANISLQGKGLSGEIP-AAVGGLKSLTGLYLHFNALNG--------------------------VIPKEIASLSELSD 117 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p-~~~~~l~~L~~L~L~~N~l~~--------------------------~~p~~~~~l~~L~~ 117 (673)
.++..|+|++|.+++.+| ..|.++++|++|+|++|++++ .+|..|..+++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 357778888888777666 466777777777777776543 45666777778888
Q ss_pred EEccCCCCCCCCcccccCCCCCcEeeccCccccccCc--------hhhcCccccCeecccccccCccCCccccCCCcccc
Q 005859 118 LYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIP--------TQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMR 189 (673)
Q Consensus 118 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--------~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 189 (673)
|+|++|++++..|..|.++++|++|+|++|++++..+ ..|.++++|++|+|++|+++...+..|.++++|+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 8888888887667777888888888888888775321 23677888888888888888444446888889999
Q ss_pred cccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhh-hccC--CccccCcccccCCC
Q 005859 190 LDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALK-RLNG--GFQYDNNAALCGTG 248 (673)
Q Consensus 190 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~-~~~~--~~~~~~n~~~~~~~ 248 (673)
|+|++|++++..+..|.++++|+.|+|++|+|++..|..+. .+.. .+.+.+|+..|.+.
T Consensus 565 L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred eECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999877777788888999999999999887777665 3332 34567888888765
No 316
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.76 E-value=2.4e-18 Score=194.73 Aligned_cols=167 Identities=23% Similarity=0.235 Sum_probs=140.0
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..++.|+|++|.+++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 46889999999999988889999999999999999999988889999999999999999999766666899999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCC-------------------------------------Ccc
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDL-------------------------------------GML 187 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l-------------------------------------~~L 187 (673)
++|.+++..|..|..+++|++|+|++|.+++..+..+..+ ++|
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L 234 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 234 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCC
Confidence 9999999888899999999999999999986533333222 235
Q ss_pred cccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhhhcc
Q 005859 188 MRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 188 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~~ 233 (673)
+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..+..+.
T Consensus 235 ~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 278 (597)
T 3oja_B 235 TILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 278 (597)
T ss_dssp CEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred CEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCcc
Confidence 566666666665 35677888888999999988888888776654
No 317
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.8e-18 Score=164.55 Aligned_cols=113 Identities=25% Similarity=0.308 Sum_probs=59.6
Q ss_pred CCCEEEccCCCCCCCCcc-cccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCccccccc
Q 005859 114 ELSDLYLNVNNLSGKIPS-QIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDL 192 (673)
Q Consensus 114 ~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 192 (673)
+|++|+|++|++++..+. .|..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 344444444444433322 2444444444444444444444444555555555555555555444444555555555555
Q ss_pred ccccCCCCCcccccCCCCCCEEEccCCCCCcCCc
Q 005859 193 SFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 193 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
++|++++.+|..+..+++|+.|+|++|+|.+..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 5555555555566666667777777777766554
No 318
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.75 E-value=1.3e-18 Score=173.05 Aligned_cols=163 Identities=17% Similarity=0.120 Sum_probs=142.8
Q ss_pred CCEEEEEecCCC-cccccCccccCCCCCCeEeCcC-CcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCc--
Q 005859 65 GRVANISLQGKG-LSGEIPAAVGGLKSLTGLYLHF-NALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ-- 140 (673)
Q Consensus 65 ~~v~~l~l~~~~-l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~-- 140 (673)
.+++.|+|++|. +++..+..|.++++|++|+|++ |.+++..+..|.++++|++|++++|++++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 578999999997 8877777899999999999999 99998888899999999999999999996 676 88999998
Q ss_pred -EeeccCc-cccccCchhhcCccccC-eecccccccCccCCccccCCCccccccccccc-CCCCCcccccCC-CCCCEEE
Q 005859 141 -VLQLCYN-KLTGNIPTQLGSLRKLS-VLALQYNQLTGAIPASLGDLGMLMRLDLSFNN-LFGPVPVKLANV-PKLEVLD 215 (673)
Q Consensus 141 -~L~L~~N-~l~~~~p~~l~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l-~~L~~L~ 215 (673)
+|++++| ++++..+..|..+++|+ .|++++|+++ .+|......++|+.|+|++|+ +++..+..|.++ ++|+.|+
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 9999999 99987778899999999 9999999999 555543344899999999995 987777889999 9999999
Q ss_pred ccCCCCCcCCchhhh
Q 005859 216 IRNNSFSGNVPPALK 230 (673)
Q Consensus 216 l~~N~l~g~~p~~l~ 230 (673)
+++|++++..+..+.
T Consensus 212 l~~N~l~~l~~~~~~ 226 (239)
T 2xwt_C 212 VSQTSVTALPSKGLE 226 (239)
T ss_dssp CTTCCCCCCCCTTCT
T ss_pred CCCCccccCChhHhc
Confidence 999999865444333
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.75 E-value=5.3e-19 Score=183.32 Aligned_cols=163 Identities=26% Similarity=0.248 Sum_probs=139.8
Q ss_pred CCCEEEEEecCCCcccccCccccCC-----CCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCC--Ccccc--c
Q 005859 64 NGRVANISLQGKGLSGEIPAAVGGL-----KSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGK--IPSQI--G 134 (673)
Q Consensus 64 ~~~v~~l~l~~~~l~g~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~--~ 134 (673)
...++.|+|++|.+++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 35789999999999988 8888887 9999999999999999889999999999999999998875 34455 8
Q ss_pred CCCCCcEeeccCccccc--cCc-hhhcCccccCeecccccccCccCC-ccccCCCcccccccccccCCCCCcccccCCCC
Q 005859 135 NMTNLQVLQLCYNKLTG--NIP-TQLGSLRKLSVLALQYNQLTGAIP-ASLGDLGMLMRLDLSFNNLFGPVPVKLANVPK 210 (673)
Q Consensus 135 ~l~~L~~L~L~~N~l~~--~~p-~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 210 (673)
.+++|++|+|++|++++ .++ ..+..+++|++|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 99999999999999983 223 345688999999999999998775 45777899999999999998 6777766 89
Q ss_pred CCEEEccCCCCCcCCchhhhhc
Q 005859 211 LEVLDIRNNSFSGNVPPALKRL 232 (673)
Q Consensus 211 L~~L~l~~N~l~g~~p~~l~~~ 232 (673)
|+.|+|++|+|++. |. +..+
T Consensus 276 L~~L~Ls~N~l~~~-p~-~~~l 295 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN-PS-PDEL 295 (312)
T ss_dssp EEEEECCSSCCCSC-CC-TTTS
T ss_pred ceEEECCCCCCCCC-hh-HhhC
Confidence 99999999999986 54 5443
No 320
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.75 E-value=8.5e-18 Score=175.85 Aligned_cols=161 Identities=25% Similarity=0.300 Sum_probs=125.3
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++
T Consensus 78 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 154 (332)
T 2ft3_A 78 QHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEM 154 (332)
T ss_dssp TTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEEC
T ss_pred CCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEEC
Confidence 47899999999999999999999999999999999998 5666555 89999999999999777778999999999999
Q ss_pred cCcccc--ccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCC
Q 005859 145 CYNKLT--GNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 145 ~~N~l~--~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 222 (673)
++|.++ +..|..+..+ +|++|++++|.+++ +|..+. ++|+.|++++|.+++..|..+..+++|+.|++++|+++
T Consensus 155 ~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~ 230 (332)
T 2ft3_A 155 GGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR 230 (332)
T ss_dssp CSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC
T ss_pred CCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 999996 4677777777 77777777777764 454433 56666666666666666666666666666666666666
Q ss_pred cCCchhhhhc
Q 005859 223 GNVPPALKRL 232 (673)
Q Consensus 223 g~~p~~l~~~ 232 (673)
+..|..+..+
T Consensus 231 ~~~~~~~~~l 240 (332)
T 2ft3_A 231 MIENGSLSFL 240 (332)
T ss_dssp CCCTTGGGGC
T ss_pred cCChhHhhCC
Confidence 6555555443
No 321
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=5.7e-18 Score=167.22 Aligned_cols=152 Identities=26% Similarity=0.291 Sum_probs=135.7
Q ss_pred CCCCCCCCceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCC
Q 005859 49 DPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGK 128 (673)
Q Consensus 49 ~~C~~~~w~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 128 (673)
-.|+......+.-.....++.|+|++|.+++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|+|++.
T Consensus 24 v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 103 (229)
T 3e6j_A 24 VDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVL 103 (229)
T ss_dssp EECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred eEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCcc
Confidence 34654445555555557899999999999999999999999999999999999887778889999999999999999987
Q ss_pred CcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCC
Q 005859 129 IPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPV 201 (673)
Q Consensus 129 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 201 (673)
.+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+....
T Consensus 104 ~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 104 PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred ChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 7788999999999999999999 78999999999999999999999777778999999999999999988644
No 322
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.74 E-value=6e-18 Score=184.82 Aligned_cols=184 Identities=21% Similarity=0.216 Sum_probs=155.4
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcc-------------
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPS------------- 131 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~------------- 131 (673)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+++...+.
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 4688899999999988888899999999999999999887777788888899998888888743332
Q ss_pred ------------cccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCC
Q 005859 132 ------------QIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFG 199 (673)
Q Consensus 132 ------------~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 199 (673)
.|.++++|+.|+|++|++++ +| .+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 36677788888888888885 44 58899999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCEEEccCCCCCcCCchhhhhccC--CccccCcccccCCCcc
Q 005859 200 PVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLNG--GFQYDNNAALCGTGFT 250 (673)
Q Consensus 200 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~~~--~~~~~~n~~~~~~~~~ 250 (673)
..|..|.++++|+.|+|++|+|++..+..+..+.. .+.+.+|+..|.+...
T Consensus 257 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 257 IERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred ECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 88999999999999999999999877766665543 3456788888877643
No 323
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.74 E-value=6.3e-18 Score=190.00 Aligned_cols=158 Identities=24% Similarity=0.322 Sum_probs=113.1
Q ss_pred cCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCC--CcccccCCCCCcEeeccCccccccCch-hhcCccc
Q 005859 86 GGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGK--IPSQIGNMTNLQVLQLCYNKLTGNIPT-QLGSLRK 162 (673)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~ 162 (673)
..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++. +|..|.++++|+.|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 5677788888888888877778888888888888888888753 345677888888888888888874554 4677788
Q ss_pred cCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchh-hhhccC--Ccccc
Q 005859 163 LSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPA-LKRLNG--GFQYD 239 (673)
Q Consensus 163 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-l~~~~~--~~~~~ 239 (673)
|++|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++ +|.. +..+.. .+.+.
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEec
Confidence 88888888888776666554 57888888888877 466666678888888888888874 5554 544432 23455
Q ss_pred CcccccCC
Q 005859 240 NNAALCGT 247 (673)
Q Consensus 240 ~n~~~~~~ 247 (673)
+|+..|..
T Consensus 506 ~N~~~c~c 513 (562)
T 3a79_B 506 DNPWDCTC 513 (562)
T ss_dssp SCCBCCCH
T ss_pred CCCcCCCc
Confidence 66666554
No 324
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.74 E-value=3.5e-18 Score=192.28 Aligned_cols=182 Identities=23% Similarity=0.247 Sum_probs=137.1
Q ss_pred CCEEEEEecCCCccccc--CccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCc-ccccCCCCCcE
Q 005859 65 GRVANISLQGKGLSGEI--PAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIP-SQIGNMTNLQV 141 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~ 141 (673)
..+..|++++|.+++.. |..+.++++|++|+|++|.+++..+. +..+++|+.|++++|.+.+..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 46778888888887654 66777888888888888888765444 7788888888888888876655 46778888888
Q ss_pred eeccCccccccCchhhcCccccCeecccccccC-ccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCC
Q 005859 142 LQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLT-GAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNS 220 (673)
Q Consensus 142 L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 220 (673)
|++++|.+++..|..|..+++|++|++++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 888888888777778888888888888888876 5677778888888888888888887777778888888888888888
Q ss_pred CCcCCchhhhhccC--CccccCcccccCC
Q 005859 221 FSGNVPPALKRLNG--GFQYDNNAALCGT 247 (673)
Q Consensus 221 l~g~~p~~l~~~~~--~~~~~~n~~~~~~ 247 (673)
+++..|..+..+.. .+.+.+|+..|..
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 88777666655442 2344556555543
No 325
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.74 E-value=4e-18 Score=189.68 Aligned_cols=138 Identities=25% Similarity=0.326 Sum_probs=84.8
Q ss_pred cCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCC--CCcccccCCCCCcEeeccCccccccCch-hhcCccc
Q 005859 86 GGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSG--KIPSQIGNMTNLQVLQLCYNKLTGNIPT-QLGSLRK 162 (673)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~ 162 (673)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 455666666666666666666666666666666666666664 3445566666666666666666654444 3555666
Q ss_pred cCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCch
Q 005859 163 LSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPP 227 (673)
Q Consensus 163 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 227 (673)
|++|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|+|+. +|.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~ 461 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPD 461 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCT
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCH
Confidence 66666666666655555443 56666666666666 455555566666666666666663 444
No 326
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.74 E-value=7.3e-18 Score=183.52 Aligned_cols=158 Identities=22% Similarity=0.245 Sum_probs=120.2
Q ss_pred CEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcc--------------
Q 005859 66 RVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPS-------------- 131 (673)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-------------- 131 (673)
+++.|+|++|.+++..+..|.++++|++|+|++|+|+...+..|..+++|++|+|++|+++...+.
T Consensus 89 ~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 168 (440)
T 3zyj_A 89 HLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG 168 (440)
T ss_dssp SCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCC
Confidence 566666766666665556666666666666666666655555555566666666555555422221
Q ss_pred -----------c----------------------ccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCC
Q 005859 132 -----------Q----------------------IGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIP 178 (673)
Q Consensus 132 -----------~----------------------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 178 (673)
. +..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|
T Consensus 169 ~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 248 (440)
T 3zyj_A 169 ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER 248 (440)
T ss_dssp CCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred CCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh
Confidence 1 3344566677777777887778899999999999999999999999
Q ss_pred ccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 179 ASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 179 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++.-
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 999999999999999999998888889999999999999999874
No 327
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.6e-18 Score=183.06 Aligned_cols=165 Identities=21% Similarity=0.205 Sum_probs=145.7
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCc-ccccCCCCCcEee
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIP-SQIGNMTNLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~ 143 (673)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR 155 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE
Confidence 578999999999999888999999999999999999997666669999999999999999995444 4799999999999
Q ss_pred ccCc-cccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCC
Q 005859 144 LCYN-KLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 144 L~~N-~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 222 (673)
+++| .+.+..|..|..+++|++|++++|.+++..|..+..+++|+.|++++|.+....+..+..+++|+.|++++|.++
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 9999 577777889999999999999999999988999999999999999999997544444556899999999999999
Q ss_pred cCCchhh
Q 005859 223 GNVPPAL 229 (673)
Q Consensus 223 g~~p~~l 229 (673)
+..+..+
T Consensus 236 ~~~~~~l 242 (353)
T 2z80_A 236 TFHFSEL 242 (353)
T ss_dssp TCCCC--
T ss_pred ccccccc
Confidence 8665544
No 328
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=1.3e-18 Score=200.49 Aligned_cols=202 Identities=22% Similarity=0.201 Sum_probs=118.3
Q ss_pred hhHHHHHHHHHHhcC-CCCCCcCCCCCCCCCCCCCCCceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCe-----E
Q 005859 21 TSEVDILMHIKDSLD-PENRLLTSWAPNADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTG-----L 94 (673)
Q Consensus 21 ~~~~~~ll~~~~~~~-~~~~~l~~w~~~~~~C~~~~w~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~-----L 94 (673)
..++++|+.+..++. .....-..|.....++. .|.++.++. ++++.|+|.++++.. ++..+.....|.. +
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~-~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG--TATNSAVST-PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccc--cCCCceecC-CccceEEeeCCCCCc-chhhHhhcCccCcccccCc
Confidence 456788999888763 11122345644333333 498888864 689999999998876 3433322222222 2
Q ss_pred eCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccC
Q 005859 95 YLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLT 174 (673)
Q Consensus 95 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 174 (673)
+++.|.+. ..|+.+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 23334443 45778899999999999999998 77887889999999999999999 88999999999999999999998
Q ss_pred ccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhhh
Q 005859 175 GAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKR 231 (673)
Q Consensus 175 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~ 231 (673)
.+|..|++|++|+.|+|++|.|+ .+|..|.++++|+.|+|++|+|+|.+|..+..
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 78999999999999999999987 67888999999999999999999999888754
No 329
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.73 E-value=1.3e-17 Score=178.51 Aligned_cols=167 Identities=23% Similarity=0.235 Sum_probs=134.7
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 46888999999998888888999999999999999999888888999999999999999998555555789999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCC-------------------------------------Ccc
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDL-------------------------------------GML 187 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l-------------------------------------~~L 187 (673)
++|++++..|..|..+++|++|++++|++++.....+..+ ++|
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L 228 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 228 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSC
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccc
Confidence 9999998888889999999999999998875432222222 246
Q ss_pred cccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhhhcc
Q 005859 188 MRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 188 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~~ 233 (673)
+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+.
T Consensus 229 ~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (390)
T 3o6n_A 229 TILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 272 (390)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred cEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccc
Confidence 6666666666653 4577888999999999999888888776654
No 330
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.73 E-value=7.1e-18 Score=187.68 Aligned_cols=160 Identities=21% Similarity=0.267 Sum_probs=144.8
Q ss_pred CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCc--cCCcccCCCCCCCEEEccCCCCCCCCccc-ccCCCCCc
Q 005859 64 NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNG--VIPKEIASLSELSDLYLNVNNLSGKIPSQ-IGNMTNLQ 140 (673)
Q Consensus 64 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~ 140 (673)
...++.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4578999999999999999999999999999999999997 56788999999999999999999867764 88999999
Q ss_pred EeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCC
Q 005859 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNS 220 (673)
Q Consensus 141 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 220 (673)
.|+|++|++++.+|..+. ++|++|++++|+++ .+|..+..+++|+.|+|++|+++...+..+..+++|+.|++++|+
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCC
Confidence 999999999988887664 79999999999999 789888899999999999999995444448999999999999999
Q ss_pred CCcCCc
Q 005859 221 FSGNVP 226 (673)
Q Consensus 221 l~g~~p 226 (673)
+++..+
T Consensus 480 ~~c~c~ 485 (520)
T 2z7x_B 480 WDCSCP 485 (520)
T ss_dssp BCCCHH
T ss_pred CcccCC
Confidence 998765
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.73 E-value=2.2e-18 Score=178.56 Aligned_cols=155 Identities=20% Similarity=0.161 Sum_probs=133.2
Q ss_pred CCEEEEEecCCCcccccC----ccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCC--C--cccccCC
Q 005859 65 GRVANISLQGKGLSGEIP----AAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGK--I--PSQIGNM 136 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~--p~~~~~l 136 (673)
..+..|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++.+. + +..++.+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 468899999999998766 4566899999999999999999999999999999999999998752 2 2334789
Q ss_pred CCCcEeeccCccccccCch----hhcCccccCeecccccccCccCCccccCC---CcccccccccccCCCCCcccccCCC
Q 005859 137 TNLQVLQLCYNKLTGNIPT----QLGSLRKLSVLALQYNQLTGAIPASLGDL---GMLMRLDLSFNNLFGPVPVKLANVP 209 (673)
Q Consensus 137 ~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~l~ 209 (673)
++|++|+|++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. +
T Consensus 197 ~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--A 272 (310)
T ss_dssp CCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--S
T ss_pred CCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--C
Confidence 999999999999973 333 35788999999999999998888888777 69999999999999 5677664 7
Q ss_pred CCCEEEccCCCCCc
Q 005859 210 KLEVLDIRNNSFSG 223 (673)
Q Consensus 210 ~L~~L~l~~N~l~g 223 (673)
+|+.|+|++|+|++
T Consensus 273 ~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 273 KLRVLDLSSNRLNR 286 (310)
T ss_dssp CCSCEECCSCCCCS
T ss_pred CCCEEECCCCcCCC
Confidence 99999999999997
No 332
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.73 E-value=1.1e-17 Score=174.82 Aligned_cols=161 Identities=29% Similarity=0.367 Sum_probs=121.9
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCC--CCcccccCCCCCcEe
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSG--KIPSQIGNMTNLQVL 142 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L 142 (673)
.++..|+|++|.++ .+|..+. ++|++|+|++|.+++..+..|..+++|+.|++++|.+.. ..+..|.++++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 100 VKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp TTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 36788888888887 5665554 788888888888887777778888888888888888853 567778888888888
Q ss_pred eccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCC
Q 005859 143 QLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 143 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 222 (673)
++++|.++. +|..+. ++|++|++++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++
T Consensus 177 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 177 RIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 888888874 555443 67888888888887777777888888888888888887766667777788888888888877
Q ss_pred cCCchhhhhc
Q 005859 223 GNVPPALKRL 232 (673)
Q Consensus 223 g~~p~~l~~~ 232 (673)
.+|..+..+
T Consensus 254 -~lp~~l~~l 262 (330)
T 1xku_A 254 -KVPGGLADH 262 (330)
T ss_dssp -SCCTTTTTC
T ss_pred -cCChhhccC
Confidence 566666544
No 333
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.1e-17 Score=160.34 Aligned_cols=131 Identities=29% Similarity=0.358 Sum_probs=118.8
Q ss_pred EEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCc-ccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCc
Q 005859 69 NISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK-EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYN 147 (673)
Q Consensus 69 ~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 147 (673)
.++++++++ +.+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 566677888 467876654 999999999999987775 4899999999999999999999999999999999999999
Q ss_pred cccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCc
Q 005859 148 KLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVP 202 (673)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 202 (673)
++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+.+..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999989899999999999999999999999999999999999999999987654
No 334
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.72 E-value=7.4e-18 Score=188.80 Aligned_cols=165 Identities=21% Similarity=0.329 Sum_probs=147.6
Q ss_pred CceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccC
Q 005859 56 FDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGN 135 (673)
Q Consensus 56 w~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 135 (673)
|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.+
T Consensus 6 ~~~~-c~---------~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 72 (549)
T 2z81_A 6 ASGV-CD---------GRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS 72 (549)
T ss_dssp TTSE-EE---------CTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCce-EE---------CCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc
Confidence 8888 74 3466776 5777664 89999999999999999999999999999999999999988899999
Q ss_pred CCCCcEeeccCccccccCchhhcCccccCeecccccccCc-cCCccccCCCcccccccccccCCCCCc-ccccCCCCCCE
Q 005859 136 MTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTG-AIPASLGDLGMLMRLDLSFNNLFGPVP-VKLANVPKLEV 213 (673)
Q Consensus 136 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~ 213 (673)
+++|++|+|++|++++..|..|+.+++|++|++++|.+++ ..|..++++++|+.|++++|.+.+.+| ..+.++++|+.
T Consensus 73 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~ 152 (549)
T 2z81_A 73 LGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNE 152 (549)
T ss_dssp CTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred cccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCe
Confidence 9999999999999998888889999999999999999986 467789999999999999999655555 68999999999
Q ss_pred EEccCCCCCcCCchhhhhcc
Q 005859 214 LDIRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 214 L~l~~N~l~g~~p~~l~~~~ 233 (673)
|++++|.+++.+|..+..+.
T Consensus 153 L~L~~n~l~~~~~~~l~~l~ 172 (549)
T 2z81_A 153 LEIKALSLRNYQSQSLKSIR 172 (549)
T ss_dssp EEEEETTCCEECTTTTTTCS
T ss_pred eeccCCcccccChhhhhccc
Confidence 99999999999998887654
No 335
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.72 E-value=3.8e-18 Score=189.80 Aligned_cols=162 Identities=27% Similarity=0.339 Sum_probs=135.1
Q ss_pred cCCCCCCCCCCCCC--CCceE-EeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCE
Q 005859 41 LTSWAPNADPCSSD--SFDGV-ACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSD 117 (673)
Q Consensus 41 l~~w~~~~~~C~~~--~w~gv-~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 117 (673)
+.+|..+.++|... .|.|+ .|. .++++.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|++
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHHhccCCccccccchhhhccccc-cCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 45676667788421 49999 685 3589999999999998 88766 389999999999999 566 55799999
Q ss_pred EEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccC
Q 005859 118 LYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNL 197 (673)
Q Consensus 118 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 197 (673)
|+|++|+|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 9999999997 777 665 99999999999997 666 68899999999999986 666 578999999999999
Q ss_pred CCCCcccccCCCCCCEEEccCCCCCcCCch
Q 005859 198 FGPVPVKLANVPKLEVLDIRNNSFSGNVPP 227 (673)
Q Consensus 198 ~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 227 (673)
++ +|. +. ++|+.|+|++|+|+ .+|.
T Consensus 173 ~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 173 TF-LPE-LP--ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SC-CCC-CC--TTCCEEECCSSCCS-SCCC
T ss_pred CC-cch-hh--CCCCEEECcCCCCC-chhh
Confidence 87 666 65 89999999999998 5665
No 336
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.72 E-value=1.4e-17 Score=187.16 Aligned_cols=162 Identities=22% Similarity=0.291 Sum_probs=144.1
Q ss_pred CCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCcc--CCcccCCCCCCCEEEccCCCCCCCCcc-cccCCCCC
Q 005859 63 ENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGV--IPKEIASLSELSDLYLNVNNLSGKIPS-QIGNMTNL 139 (673)
Q Consensus 63 ~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L 139 (673)
....++.|+|++|.+++.+|..+.++++|++|+|++|++++. +|..+..+++|++|+|++|++++.+|. .+..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 345789999999999999999999999999999999999973 457799999999999999999985665 58899999
Q ss_pred cEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCC
Q 005859 140 QVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNN 219 (673)
Q Consensus 140 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 219 (673)
+.|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCC
Confidence 9999999999987776554 79999999999998 78888889999999999999999544444899999999999999
Q ss_pred CCCcCCch
Q 005859 220 SFSGNVPP 227 (673)
Q Consensus 220 ~l~g~~p~ 227 (673)
++.+..|.
T Consensus 508 ~~~c~c~~ 515 (562)
T 3a79_B 508 PWDCTCPG 515 (562)
T ss_dssp CBCCCHHH
T ss_pred CcCCCcch
Confidence 99987764
No 337
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.71 E-value=2.1e-18 Score=179.30 Aligned_cols=148 Identities=21% Similarity=0.211 Sum_probs=91.9
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..| +..+++|++|+|++|.+++.. ..++|++|++++|++++..+. .+++|+.|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEEC
Confidence 356667777776666544 666677777777777666432 124555555555555433222 2456777777
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccc-cCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASL-GDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
++|++++..|..+..+++|++|+|++|.+++..|..+ ..+++|+.|+|++|.+++. |. ...+++|+.|+|++|++++
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~ 205 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF 205 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc
Confidence 7777776666667777777777777777776655555 3567777777777777654 22 2346677777777777765
Q ss_pred C
Q 005859 224 N 224 (673)
Q Consensus 224 ~ 224 (673)
.
T Consensus 206 l 206 (317)
T 3o53_A 206 M 206 (317)
T ss_dssp E
T ss_pred c
Confidence 3
No 338
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=1.9e-17 Score=155.01 Aligned_cols=133 Identities=24% Similarity=0.198 Sum_probs=88.7
Q ss_pred CCCCCeEeCcCCcCC-ccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCee
Q 005859 88 LKSLTGLYLHFNALN-GVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVL 166 (673)
Q Consensus 88 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 166 (673)
.++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..|..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356667777777766 56666666667777777777776654 556667777777777777766666666667777777
Q ss_pred cccccccCccC-CccccCCCcccccccccccCCCCCc---ccccCCCCCCEEEccCCCCC
Q 005859 167 ALQYNQLTGAI-PASLGDLGMLMRLDLSFNNLFGPVP---VKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 167 ~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~ 222 (673)
+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776432 1566677777777777777765544 35667777777777777665
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.70 E-value=5.9e-17 Score=167.50 Aligned_cols=148 Identities=28% Similarity=0.420 Sum_probs=86.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++. +.+..+++|++|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 345666666666654333 66666666666666666542 245666666666666666654 232 566666666666
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++..+ +..+++|+.|++++|.+++. +. +..+++|+.|++++|++++..+ +..+++|+.|++++|++++.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcc
Confidence 6666664322 55666666666666666542 22 5566666666666666654333 55566666666666666543
No 340
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=7.8e-18 Score=185.37 Aligned_cols=172 Identities=23% Similarity=0.217 Sum_probs=133.0
Q ss_pred CCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 64 NGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 64 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
...+..|+|++|.+++..+ .++|++|+|++|.|++..+. .+++|+.|+|++|.+++..|..|+++++|+.|+
T Consensus 79 l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 150 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (487)
T ss_dssp CTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEE
T ss_pred CCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEE
Confidence 3578889999998886433 38889999999998876654 357888999999999888888888889999999
Q ss_pred ccCccccccCchhhc-CccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCC
Q 005859 144 LCYNKLTGNIPTQLG-SLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 144 L~~N~l~~~~p~~l~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 222 (673)
|++|.+++..|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|.+++.+| .+..+++|+.|+|++|.|+
T Consensus 151 Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCc
Confidence 999999888887776 788899999999998865 32 3458889999999999887544 4788888999999999988
Q ss_pred cCCchhhhhccC--CccccCcccccCC
Q 005859 223 GNVPPALKRLNG--GFQYDNNAALCGT 247 (673)
Q Consensus 223 g~~p~~l~~~~~--~~~~~~n~~~~~~ 247 (673)
+ +|..+..+.. .+.+.+|...|+.
T Consensus 228 ~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 228 L-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp E-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred c-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 6 6666554432 2345566666553
No 341
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.70 E-value=8.9e-17 Score=164.72 Aligned_cols=147 Identities=27% Similarity=0.372 Sum_probs=119.0
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+++++++... + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4578888888888754 3 47888888899998888887554 8888888999998888875 33 4888888899999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|++++|.+++
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 88888863 4688888888899988888864 568888888888888888887655 7888888889998888876
No 342
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=1.7e-17 Score=152.01 Aligned_cols=129 Identities=21% Similarity=0.199 Sum_probs=93.6
Q ss_pred CCCCCeEeCcCCcCC-ccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCee
Q 005859 88 LKSLTGLYLHFNALN-GVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVL 166 (673)
Q Consensus 88 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 166 (673)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 366777777777777 66777777777777777777777754 667777777777777777776677777777777777
Q ss_pred cccccccCcc-CCccccCCCcccccccccccCCCCCc---ccccCCCCCCEEEccC
Q 005859 167 ALQYNQLTGA-IPASLGDLGMLMRLDLSFNNLFGPVP---VKLANVPKLEVLDIRN 218 (673)
Q Consensus 167 ~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 218 (673)
++++|.+++. .|..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 7777777753 33667777777777777777776555 4567777788777753
No 343
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=152.97 Aligned_cols=110 Identities=23% Similarity=0.376 Sum_probs=67.3
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccc
Q 005859 114 ELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLS 193 (673)
Q Consensus 114 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 193 (673)
+|++|+|++|+|+ .+|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555555555554 444555555555555555555555555555556666666666666665555556666666666666
Q ss_pred cccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 194 FNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 194 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
+|+|+...+..|..+++|+.|+|++|++...
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 6666655555667777788888888887653
No 344
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4.8e-17 Score=152.32 Aligned_cols=136 Identities=24% Similarity=0.178 Sum_probs=122.8
Q ss_pred CCEEEEEecCCCcc-cccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 65 GRVANISLQGKGLS-GEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
.+++.|+|++|+++ |.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999998 89999999999999999999999976 7899999999999999999988899898999999999
Q ss_pred ccCccccccC-chhhcCccccCeecccccccCccCC---ccccCCCcccccccccccCCCCCcc
Q 005859 144 LCYNKLTGNI-PTQLGSLRKLSVLALQYNQLTGAIP---ASLGDLGMLMRLDLSFNNLFGPVPV 203 (673)
Q Consensus 144 L~~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p~ 203 (673)
|++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.+.. +|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE-APD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB-CCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh-ccc
Confidence 9999999642 2789999999999999999996655 479999999999999999874 443
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.68 E-value=8.7e-17 Score=164.80 Aligned_cols=148 Identities=30% Similarity=0.415 Sum_probs=132.5
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|.+++..+ +.++++|++|+|++|.+++ +| .+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 578999999999998655 9999999999999999986 33 499999999999999999964 56899999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|+|++|.+++. | .+..+++|+.|++++|+++..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 99999965 679999999999999999997554 99999999999999999864 4 488999999999999999863
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.68 E-value=1.6e-16 Score=164.14 Aligned_cols=150 Identities=30% Similarity=0.465 Sum_probs=132.5
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+++++++.. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 478999999999885 45 68999999999999999997555 9999999999999999986 34 6999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++ ++. +..+++|++|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++.
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC
Confidence 9999996 443 9999999999999999986543 8899999999999999997544 88999999999999999875
Q ss_pred Cc
Q 005859 225 VP 226 (673)
Q Consensus 225 ~p 226 (673)
.+
T Consensus 189 ~~ 190 (308)
T 1h6u_A 189 SP 190 (308)
T ss_dssp GG
T ss_pred hh
Confidence 44
No 347
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.68 E-value=2.1e-17 Score=171.70 Aligned_cols=139 Identities=21% Similarity=0.231 Sum_probs=78.5
Q ss_pred CCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccc-cCCCCCcEeeccCccccccCchhhcCccccCee
Q 005859 88 LKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQI-GNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVL 166 (673)
Q Consensus 88 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 166 (673)
+++|++|+|++|++++..|..+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++. |. ...+++|++|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 4555566666666655555555556666666666666665444444 2456666666666666543 21 2235566666
Q ss_pred cccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCC-cCCchhhh
Q 005859 167 ALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFS-GNVPPALK 230 (673)
Q Consensus 167 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~l~ 230 (673)
+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++. +.+|..+.
T Consensus 197 ~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred ECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 666666653 3334556666666666666665 34555556666666666666665 44444443
No 348
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.9e-16 Score=149.59 Aligned_cols=114 Identities=24% Similarity=0.266 Sum_probs=67.2
Q ss_pred CCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecc
Q 005859 89 KSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLAL 168 (673)
Q Consensus 89 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 168 (673)
++|+.|+|++|++++..+..|..+++|++|+|++|++++..+. .|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------------------------~~~~l~~L~~L~l 83 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG------------------------VFDKLTKLTILYL 83 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT------------------------TTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh------------------------HccCCCccCEEEC
Confidence 4556666666666554444455555555555555555543333 3444555555555
Q ss_pred cccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCc
Q 005859 169 QYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 169 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.+..|
T Consensus 84 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 84 HENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 5555554444445556666666666666665555556677888888888888887665
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.68 E-value=1.1e-16 Score=178.21 Aligned_cols=147 Identities=22% Similarity=0.292 Sum_probs=82.6
Q ss_pred CEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeecc
Q 005859 66 RVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLC 145 (673)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 145 (673)
.+..|+|++|.|++ +|. +.+ +|++|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|+
T Consensus 101 ~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 168 (571)
T 3cvr_A 101 SLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVR 168 (571)
T ss_dssp TCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECC
Confidence 34445555555544 444 333 55555555555554 333 34555555555555554 343 34566666666
Q ss_pred CccccccCchhhcCccccCeecccccccCccCCccccCCCcc-------cccccccccCCCCCcccccCCCCCCEEEccC
Q 005859 146 YNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGML-------MRLDLSFNNLFGPVPVKLANVPKLEVLDIRN 218 (673)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 218 (673)
+|+|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 169 ~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~ 239 (571)
T 3cvr_A 169 NNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILED 239 (571)
T ss_dssp SSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCS
T ss_pred CCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeC
Confidence 666664 444 44 56666666666666 4554 443 55 66777777766 3555555677777777777
Q ss_pred CCCCcCCchhhhhcc
Q 005859 219 NSFSGNVPPALKRLN 233 (673)
Q Consensus 219 N~l~g~~p~~l~~~~ 233 (673)
|+|++.+|..+..+.
T Consensus 240 N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 240 NPLSSRIRESLSQQT 254 (571)
T ss_dssp SSCCHHHHHHHHHHH
T ss_pred CcCCCcCHHHHHHhh
Confidence 777777776666543
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=4.4e-18 Score=196.04 Aligned_cols=164 Identities=25% Similarity=0.270 Sum_probs=126.4
Q ss_pred CEEEEEecCCCccc---------ccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCC
Q 005859 66 RVANISLQGKGLSG---------EIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNM 136 (673)
Q Consensus 66 ~v~~l~l~~~~l~g---------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (673)
.+..++|+.+.|.+ ..|..+..++.|+.|+|++|.|. .+|..+..+++|++|+|++|.|+ .+|..|++|
T Consensus 192 ~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 269 (727)
T 4b8c_D 192 LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNL 269 (727)
T ss_dssp ------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGG
T ss_pred HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCC
Confidence 34455555555444 34778999999999999999998 67888889999999999999999 889999999
Q ss_pred CCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCC-CCEEE
Q 005859 137 TNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPK-LEVLD 215 (673)
Q Consensus 137 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~ 215 (673)
++|++|+|++|+|+ .+|..|+.|++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~ 347 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFY 347 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHh
Confidence 99999999999999 78999999999999999999997 78888999999999999999999998887765422 23478
Q ss_pred ccCCCCCcCCchhhhhcc
Q 005859 216 IRNNSFSGNVPPALKRLN 233 (673)
Q Consensus 216 l~~N~l~g~~p~~l~~~~ 233 (673)
|++|.++|.+|..+..+.
T Consensus 348 l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 348 LRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp HHHCCCCCCCCCC-----
T ss_pred hccCcccCcCccccceeE
Confidence 999999999999876553
No 351
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=2.2e-16 Score=149.16 Aligned_cols=124 Identities=23% Similarity=0.267 Sum_probs=109.5
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (673)
.|.+|.|+.. ..++.|++++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 4999999742 368999999999998777788999999999999999998888889999999999999999
Q ss_pred CCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCC
Q 005859 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIP 178 (673)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 178 (673)
+++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|.+.+..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 998777788999999999999999997666667889999999999998886544
No 352
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=1.6e-17 Score=173.80 Aligned_cols=147 Identities=14% Similarity=0.160 Sum_probs=104.0
Q ss_pred HHHHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCC-------------CcHHHH--------HHHHHHH
Q 005859 395 EEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-------------SDEGEF--------LKGLKIL 453 (673)
Q Consensus 395 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~~~--------~~E~~~l 453 (673)
..+.....-|++...||+|+||.||+|...+|+.||||+++..... ...... .+|...|
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 4444444558999999999999999999989999999987643110 011122 3456666
Q ss_pred hccCCCCceeEeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCc
Q 005859 454 TSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNL 533 (673)
Q Consensus 454 ~~l~H~niv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDl 533 (673)
.++.+.++.-..-+.. ...+|||||++|+.|.++... .....++.|++.+|.|||.+ |||||||
T Consensus 168 ~rL~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~--gIVHrDL 231 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH--GLIHGDF 231 (397)
T ss_dssp HHHHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT--TEECSCC
T ss_pred HHHHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC--CCcCCCC
Confidence 6665444321111111 123699999999888765531 12346789999999999987 8999999
Q ss_pred CCCCeEecCCCC----------eeeccccccccc
Q 005859 534 SAEKVLIHRRYN----------PLLSDSGLHKLL 557 (673)
Q Consensus 534 k~~NILl~~~~~----------~kl~DfGla~~~ 557 (673)
||.|||+++++. +.|+||+-+-..
T Consensus 232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp STTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999999988763 789999977544
No 353
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=5.5e-17 Score=148.63 Aligned_cols=128 Identities=23% Similarity=0.201 Sum_probs=117.3
Q ss_pred CCEEEEEecCCCcc-cccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 65 GRVANISLQGKGLS-GEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
.+++.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999999 89999999999999999999999976 7899999999999999999988999999999999999
Q ss_pred ccCcccccc-CchhhcCccccCeecccccccCccCC---ccccCCCccccccccc
Q 005859 144 LCYNKLTGN-IPTQLGSLRKLSVLALQYNQLTGAIP---ASLGDLGMLMRLDLSF 194 (673)
Q Consensus 144 L~~N~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 194 (673)
+++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999974 45889999999999999999997665 5789999999999874
No 354
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=1.8e-16 Score=159.89 Aligned_cols=147 Identities=24% Similarity=0.323 Sum_probs=128.2
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|++++|+++. +| .+..+++|++|+|++|+|++..+ +..+++|++|+|++|++++ +|.. .. ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEc
Confidence 468899999999884 55 68999999999999999997655 9999999999999999996 4443 33 99999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++. + .+..+++|++|+|++|++++. | .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 114 ~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 114 DNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred cCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 99999963 4 699999999999999999864 4 688999999999999999876 6788999999999999999875
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.66 E-value=2.1e-16 Score=177.70 Aligned_cols=148 Identities=31% Similarity=0.428 Sum_probs=119.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..+..|+|++|.|++..| +..|++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 467888888888887555 8888888888888888875 33 68888888888888888885 3 45788888888888
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++. ..|..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 88888864 568888888888888888886655 88888888888888888764 3 577888888888888888764
No 356
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.65 E-value=2.3e-16 Score=166.12 Aligned_cols=171 Identities=21% Similarity=0.134 Sum_probs=122.7
Q ss_pred CCceEEeCCC----------CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCC-cccCCCCCCCE-EEccC
Q 005859 55 SFDGVACDEN----------GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIP-KEIASLSELSD-LYLNV 122 (673)
Q Consensus 55 ~w~gv~c~~~----------~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~l~~ 122 (673)
.|..|.|+.. ..++.|+|++|.|+...+..|.+|++|++|+|++|++.+.+| ..|.++++|.. +.++.
T Consensus 10 ~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 10 SNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp ETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred eCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4888999632 368999999999996656689999999999999999977665 46889988875 66778
Q ss_pred CCCCCCCcccccCCCCCcEeeccCccccccCchhhcCcc--------------------------ccCeecccccccCcc
Q 005859 123 NNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLR--------------------------KLSVLALQYNQLTGA 176 (673)
Q Consensus 123 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~--------------------------~L~~L~l~~N~l~~~ 176 (673)
|+++...|..|..+++|++|++++|++++..+..+.... .|+.|+|++|+|+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~- 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE- 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-
Confidence 999988888999999999999999998855443333322 35556666666663
Q ss_pred CCccccCCCccccccccc-ccCCCCCcccccCCCCCCEEEccCCCCCcCCc
Q 005859 177 IPASLGDLGMLMRLDLSF-NNLFGPVPVKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 177 ~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
+|.......+|+.|++++ |.++...+..|.++++|+.|||++|+|+...+
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 344333445666666654 44443333456667777777777777764333
No 357
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=5e-16 Score=148.87 Aligned_cols=127 Identities=29% Similarity=0.456 Sum_probs=114.4
Q ss_pred EEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCcc
Q 005859 69 NISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNK 148 (673)
Q Consensus 69 ~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 148 (673)
.+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4667778877 5776553 68999999999998 678999999999999999999998888899999999999999999
Q ss_pred ccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCC
Q 005859 149 LTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFG 199 (673)
Q Consensus 149 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 199 (673)
+++..|..|..+++|++|+|++|.|++..+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999888899999999999999999997666679999999999999999864
No 358
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.65 E-value=3.1e-16 Score=150.95 Aligned_cols=136 Identities=21% Similarity=0.285 Sum_probs=121.9
Q ss_pred cccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCcccc
Q 005859 84 AVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163 (673)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 163 (673)
....+++|+.|+|++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..|+.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3467899999999999998 556 6999999999999999775 34579999999999999999998889999999999
Q ss_pred CeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 164 SVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 164 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++|++++..|..+..+++|+.|++++|.+.+.+| .+..+++|+.|++++|++++.
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~ 174 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY 174 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh
Confidence 999999999998889999999999999999998334556 688999999999999999873
No 359
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.65 E-value=2.9e-16 Score=172.21 Aligned_cols=154 Identities=29% Similarity=0.452 Sum_probs=133.3
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..+..|++++|.+++. +.+..+++|+.|+|++|.+++..| +..+++|+.|++++|.+++..| +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 4688999999998864 468899999999999999997655 8899999999999999996544 889999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++..| +..+++|+.|++++|++++..| +..+++|+.|++++|.+++. ..+.++++|+.|++++|++++.
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 368 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDL 368 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBC
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCcc
Confidence 9999997544 8899999999999999997665 78899999999999999875 4688999999999999999988
Q ss_pred Cchhhhhc
Q 005859 225 VPPALKRL 232 (673)
Q Consensus 225 ~p~~l~~~ 232 (673)
.| +..+
T Consensus 369 ~~--~~~l 374 (466)
T 1o6v_A 369 TP--LANL 374 (466)
T ss_dssp GG--GTTC
T ss_pred ch--hhcC
Confidence 77 4444
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.65 E-value=4.7e-16 Score=174.82 Aligned_cols=154 Identities=28% Similarity=0.390 Sum_probs=135.6
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|+++.+.. +| .|..|++|+.|+|++|.|++..| +..+++|+.|+|++|++++ +| .|..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 467889999999875 34 58999999999999999998665 9999999999999999985 34 7999999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++ + ..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++.
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 9999996 3 4699999999999999999965 679999999999999999998777 89999999999999999974
Q ss_pred Cchhhhhc
Q 005859 225 VPPALKRL 232 (673)
Q Consensus 225 ~p~~l~~~ 232 (673)
| .+..+
T Consensus 191 -~-~l~~l 196 (605)
T 1m9s_A 191 -R-ALAGL 196 (605)
T ss_dssp -G-GGTTC
T ss_pred -h-HHccC
Confidence 3 45444
No 361
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.64 E-value=4.3e-16 Score=163.78 Aligned_cols=152 Identities=22% Similarity=0.312 Sum_probs=135.3
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..+..|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++. |. +..+++|++|++
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEEC
Confidence 468899999999986544 8899999999999999987655 88999999999999999964 44 899999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|.+++. ..+..+++|++|++++|.+++. +.+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++.
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 99999963 5689999999999999999864 4588999999999999999988888999999999999999999987
Q ss_pred Cc
Q 005859 225 VP 226 (673)
Q Consensus 225 ~p 226 (673)
.|
T Consensus 327 ~~ 328 (347)
T 4fmz_A 327 RP 328 (347)
T ss_dssp GG
T ss_pred cC
Confidence 66
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.64 E-value=5.4e-18 Score=189.46 Aligned_cols=154 Identities=21% Similarity=0.227 Sum_probs=128.8
Q ss_pred EEEEEecCCCcccccCccccCCCCCCeEeCcCCc-------------CCccCCcccCCC---------------------
Q 005859 67 VANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNA-------------LNGVIPKEIASL--------------------- 112 (673)
Q Consensus 67 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l--------------------- 112 (673)
+..|+|++|.|+ .+|..+++|++|+.|++++|. +.+.+|..++.+
T Consensus 351 L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~ 429 (567)
T 1dce_A 351 LFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKF 429 (567)
T ss_dssp SSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred ceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhh
Confidence 335667777775 788899999999999987775 445555433221
Q ss_pred -----------CCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccc
Q 005859 113 -----------SELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASL 181 (673)
Q Consensus 113 -----------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~ 181 (673)
..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .+
T Consensus 430 l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l 504 (567)
T 1dce_A 430 LLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GV 504 (567)
T ss_dssp HHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GG
T ss_pred hhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-cc
Confidence 257789999999996 676 999999999999999999 789999999999999999999996 67 89
Q ss_pred cCCCcccccccccccCCCCC-cccccCCCCCCEEEccCCCCCcCCc
Q 005859 182 GDLGMLMRLDLSFNNLFGPV-PVKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 182 ~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
+.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|
T Consensus 505 ~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 505 ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp TTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999999999999999887 8899999999999999999998765
No 363
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.63 E-value=1.3e-15 Score=166.99 Aligned_cols=154 Identities=32% Similarity=0.437 Sum_probs=135.5
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..+..|++++|.+++..| ++.+++|+.|+|++|.+++. +.+..+++|+.|++++|.+++..| +..+++|+.|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 578999999999998766 78899999999999999864 468899999999999999997655 899999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|.+++..+ +..+++|+.|++++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 273 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 9999997544 8999999999999999997544 8899999999999999998776 77899999999999999985
Q ss_pred Cchhhhhc
Q 005859 225 VPPALKRL 232 (673)
Q Consensus 225 ~p~~l~~~ 232 (673)
+.+..+
T Consensus 347 --~~l~~l 352 (466)
T 1o6v_A 347 --SSLANL 352 (466)
T ss_dssp --GGGTTC
T ss_pred --hhhccC
Confidence 344443
No 364
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.63 E-value=9.5e-16 Score=161.13 Aligned_cols=158 Identities=26% Similarity=0.395 Sum_probs=138.9
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..+..|+++++.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 228 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc
Confidence 478899999999886554 8899999999999999986544 8899999999999999996544 899999999999
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++.
T Consensus 229 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~ 302 (347)
T 4fmz_A 229 GNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNE 302 (347)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGG
T ss_pred cCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCc
Confidence 9999996443 89999999999999999863 4689999999999999999875 3588899999999999999999
Q ss_pred CchhhhhccC
Q 005859 225 VPPALKRLNG 234 (673)
Q Consensus 225 ~p~~l~~~~~ 234 (673)
.|..+..+..
T Consensus 303 ~~~~l~~l~~ 312 (347)
T 4fmz_A 303 DMEVIGGLTN 312 (347)
T ss_dssp GHHHHHTCTT
T ss_pred ChhHhhcccc
Confidence 8888876653
No 365
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.62 E-value=4.7e-17 Score=170.32 Aligned_cols=167 Identities=18% Similarity=0.198 Sum_probs=124.5
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCcc-CCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGV-IPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
..++.+++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777776555 55688888888888887765 777778888888888888888777777788888888888
Q ss_pred ccCc-cccc-cCchhhcCccccCeeccccc-ccCcc-CCccccCCC-cccccccccc--cCC-CCCcccccCCCCCCEEE
Q 005859 144 LCYN-KLTG-NIPTQLGSLRKLSVLALQYN-QLTGA-IPASLGDLG-MLMRLDLSFN--NLF-GPVPVKLANVPKLEVLD 215 (673)
Q Consensus 144 L~~N-~l~~-~~p~~l~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~~~~l~~L~~L~ 215 (673)
|++| .+++ .++..+..+++|++|++++| .+++. ++..+..++ +|+.|+|++| .++ +.+|..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 8888 5665 25666777888888888888 77754 566677788 8888888888 444 34566667788888888
Q ss_pred ccCCC-CCcCCchhhhhc
Q 005859 216 IRNNS-FSGNVPPALKRL 232 (673)
Q Consensus 216 l~~N~-l~g~~p~~l~~~ 232 (673)
+++|. +++..+..+..+
T Consensus 229 l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp CTTCTTCCGGGGGGGGGC
T ss_pred CCCCCcCCHHHHHHHhCC
Confidence 88887 666666666544
No 366
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.62 E-value=4e-15 Score=162.26 Aligned_cols=150 Identities=21% Similarity=0.251 Sum_probs=113.3
Q ss_pred ceEEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCC
Q 005859 57 DGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNM 136 (673)
Q Consensus 57 ~gv~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (673)
.++......+++.|+|++|.+++. | ++++++|++|+|++|++++. | ++.+++|++|++++|++++. | ++++
T Consensus 77 ~~~~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l 147 (457)
T 3bz5_A 77 TTLDLSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHN 147 (457)
T ss_dssp SCCCCTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTC
T ss_pred CeEccccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccC
Confidence 333333345788999999999884 3 88999999999999999874 4 88899999999999999874 3 7778
Q ss_pred CCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEc
Q 005859 137 TNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDI 216 (673)
Q Consensus 137 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 216 (673)
++|++|++++|+..+.+ .+..+++|++|++++|++++ +| ++.+++|+.|++++|++++. .+..+++|+.|++
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEEC
Confidence 88888888888655555 36677777888888877775 44 66777777777777777764 3666777777777
Q ss_pred cCCCCCc
Q 005859 217 RNNSFSG 223 (673)
Q Consensus 217 ~~N~l~g 223 (673)
++|++++
T Consensus 220 s~N~l~~ 226 (457)
T 3bz5_A 220 SSNKLTE 226 (457)
T ss_dssp CSSCCSC
T ss_pred cCCcccc
Confidence 7777776
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=2.5e-18 Score=165.81 Aligned_cols=131 Identities=26% Similarity=0.310 Sum_probs=68.2
Q ss_pred EEEEEecCCCcccccCc------cccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCc
Q 005859 67 VANISLQGKGLSGEIPA------AVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140 (673)
Q Consensus 67 v~~l~l~~~~l~g~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 140 (673)
++.++++.+.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|++|++++|+++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 33344444444444444 55555555555555555554 34 5555555555555555555 4455555555555
Q ss_pred EeeccCccccccCchhhcCccccCeecccccccCccCC-ccccCCCcccccccccccCCCCCc
Q 005859 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIP-ASLGDLGMLMRLDLSFNNLFGPVP 202 (673)
Q Consensus 141 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p 202 (673)
+|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.+.+|
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 55555555553 23 45555555555555555553211 245555555555555555544433
No 368
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.60 E-value=4.4e-15 Score=161.97 Aligned_cols=143 Identities=20% Similarity=0.244 Sum_probs=110.7
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
.+++.|+|++|++++. | .++.+++|++|+|++|+|++. | ++.+++|++|++++|++++. | ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4677888888888864 4 688888888888888888874 3 78888888888888888864 3 778888888888
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
++|++++ +| ++.+++|++|++++|++++. + ++.+++|+.|++++|+..+.+ .+..+++|+.|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 8888886 44 77888888888888888763 3 777788888888888655555 36677788888888888776
No 369
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.60 E-value=8.6e-17 Score=168.28 Aligned_cols=156 Identities=19% Similarity=0.188 Sum_probs=140.2
Q ss_pred CCEEEEEecCCCcccc-cCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCC-CCCCC-CcccccCCCCCcE
Q 005859 65 GRVANISLQGKGLSGE-IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVN-NLSGK-IPSQIGNMTNLQV 141 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~~ 141 (673)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++. +|..+.++++|+.
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5789999999999877 8888999999999999999999888999999999999999999 78753 6777899999999
Q ss_pred eeccCc-ccccc-CchhhcCcc-ccCeeccccc--ccC-ccCCccccCCCccccccccccc-CCCCCcccccCCCCCCEE
Q 005859 142 LQLCYN-KLTGN-IPTQLGSLR-KLSVLALQYN--QLT-GAIPASLGDLGMLMRLDLSFNN-LFGPVPVKLANVPKLEVL 214 (673)
Q Consensus 142 L~L~~N-~l~~~-~p~~l~~l~-~L~~L~l~~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L 214 (673)
|+|++| .+++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L 252 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 252 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEe
Confidence 999999 99864 677889999 9999999999 555 5677788899999999999999 777778889999999999
Q ss_pred EccCCC
Q 005859 215 DIRNNS 220 (673)
Q Consensus 215 ~l~~N~ 220 (673)
++++|.
T Consensus 253 ~l~~~~ 258 (336)
T 2ast_B 253 SLSRCY 258 (336)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 999996
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.59 E-value=1.9e-15 Score=152.30 Aligned_cols=145 Identities=24% Similarity=0.291 Sum_probs=123.9
Q ss_pred EEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccC
Q 005859 67 VANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCY 146 (673)
Q Consensus 67 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 146 (673)
++.+++.++.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|++++..| +.++++|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 445567777777544 57889999999999999985 45 68999999999999999996544 99999999999999
Q ss_pred ccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 147 NKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
|++++ +|.. .. ++|++|+|++|++++ ++ .+..+++|+.|+|++|++++. + .+..+++|+.|++++|++++.
T Consensus 95 N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 95 NRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp SCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 99996 4443 33 899999999999996 44 699999999999999999875 4 688999999999999999976
No 371
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=6.8e-16 Score=145.65 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=104.4
Q ss_pred cccCCCCCCeEeCcCCcCCccCCcccCCCC-CCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccc
Q 005859 84 AVGGLKSLTGLYLHFNALNGVIPKEIASLS-ELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRK 162 (673)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 162 (673)
.+.++++|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|++++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45677888888888888884 454 44444 888888888888864 57888888888888888888665566688888
Q ss_pred cCeecccccccCccCCc--cccCCCcccccccccccCCCCCcc----cccCCCCCCEEEccCCCCC
Q 005859 163 LSVLALQYNQLTGAIPA--SLGDLGMLMRLDLSFNNLFGPVPV----KLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 163 L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~ 222 (673)
|++|+|++|.++ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888886 4565 78888888999999998874 454 3778899999999988765
No 372
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.58 E-value=7.2e-16 Score=168.03 Aligned_cols=146 Identities=24% Similarity=0.319 Sum_probs=70.3
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCC-------------------------------
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLS------------------------------- 113 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~------------------------------- 113 (673)
.++..|++++|++ |.+|.+|++|++|++|+|++|.++|.+|..++++.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 3455666666666 66666666666666666666666666666655544
Q ss_pred --CCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccc
Q 005859 114 --ELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLD 191 (673)
Q Consensus 114 --~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 191 (673)
+|++|++++|.+++ +|.. +++|+.|++++|++++ +|.. .++|++|++++|++++ +| .|+++++|++|+
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 34444444444443 3322 2344445555554443 1211 1467777777777764 55 477777777777
Q ss_pred cccccCCCCCcccccCCCCCCEEEccCCCCCcCCc
Q 005859 192 LSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVP 226 (673)
Q Consensus 192 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 226 (673)
+++|++++ +|..+ ++|+.|++++|++++ +|
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~ 189 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP 189 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc
Confidence 77777765 44322 466777777777765 44
No 373
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.57 E-value=6.6e-17 Score=172.76 Aligned_cols=159 Identities=22% Similarity=0.281 Sum_probs=81.6
Q ss_pred CEEEEEecCC---CcccccCccc-------cCCCCCCeEeCcCCcCCc----cCCcccCCCCCCCEEEccCCCCCCCCcc
Q 005859 66 RVANISLQGK---GLSGEIPAAV-------GGLKSLTGLYLHFNALNG----VIPKEIASLSELSDLYLNVNNLSGKIPS 131 (673)
Q Consensus 66 ~v~~l~l~~~---~l~g~~p~~~-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 131 (673)
+++.|+|++| .++|.+|..+ ..+++|++|+|++|.|++ .+|..+..+++|++|+|++|.++...+.
T Consensus 61 ~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~ 140 (386)
T 2ca6_A 61 DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGA 140 (386)
T ss_dssp TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHH
T ss_pred CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHH
Confidence 4555555553 3444444433 455566666666666554 3455555555666666666655432222
Q ss_pred ccc----CC---------CCCcEeeccCcccc-ccCc---hhhcCccccCeecccccccC--c---cCCccccCCCcccc
Q 005859 132 QIG----NM---------TNLQVLQLCYNKLT-GNIP---TQLGSLRKLSVLALQYNQLT--G---AIPASLGDLGMLMR 189 (673)
Q Consensus 132 ~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~l~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~ 189 (673)
.+. .+ ++|++|+|++|+++ +.+| ..+..+++|++|+|++|+++ | .+|..+..+++|+.
T Consensus 141 ~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~ 220 (386)
T 2ca6_A 141 KIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKV 220 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCE
T ss_pred HHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccE
Confidence 222 22 55555555555554 2333 24445555555555555554 1 22324555555555
Q ss_pred cccccccCC----CCCcccccCCCCCCEEEccCCCCCcC
Q 005859 190 LDLSFNNLF----GPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 190 L~l~~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
|+|++|.++ +.+|..+..+++|+.|+|++|.|++.
T Consensus 221 L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 221 LDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp EECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred EECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 555555553 33455555555555555555555543
No 374
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.57 E-value=2e-16 Score=169.03 Aligned_cols=169 Identities=22% Similarity=0.282 Sum_probs=139.3
Q ss_pred CCEEEEEecCCCccccc----CccccCCCCCCeEeCcCC---cCCccCCccc-------CCCCCCCEEEccCCCCCC---
Q 005859 65 GRVANISLQGKGLSGEI----PAAVGGLKSLTGLYLHFN---ALNGVIPKEI-------ASLSELSDLYLNVNNLSG--- 127 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~----p~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~l~~N~l~~--- 127 (673)
.+++.|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 46899999999998764 445779999999999995 5556677665 789999999999999997
Q ss_pred -CCcccccCCCCCcEeeccCccccccCchhh----cCc---------cccCeecccccccC-ccCC---ccccCCCcccc
Q 005859 128 -KIPSQIGNMTNLQVLQLCYNKLTGNIPTQL----GSL---------RKLSVLALQYNQLT-GAIP---ASLGDLGMLMR 189 (673)
Q Consensus 128 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l----~~l---------~~L~~L~l~~N~l~-~~~p---~~~~~l~~L~~ 189 (673)
.+|..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ +.+| ..+..+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 478889999999999999999975544444 444 89999999999997 4555 46778899999
Q ss_pred cccccccCC--C---CCcccccCCCCCCEEEccCCCCC----cCCchhhhhcc
Q 005859 190 LDLSFNNLF--G---PVPVKLANVPKLEVLDIRNNSFS----GNVPPALKRLN 233 (673)
Q Consensus 190 L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~l~~~~ 233 (673)
|+|++|+++ | ..|..+..+++|+.|+|++|.++ +.+|..+..+.
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 999999997 3 34547889999999999999997 66777665543
No 375
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.56 E-value=7.6e-15 Score=165.25 Aligned_cols=67 Identities=24% Similarity=0.338 Sum_probs=35.5
Q ss_pred cccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcCCchhhhhc
Q 005859 161 RKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRL 232 (673)
Q Consensus 161 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~~ 232 (673)
++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++.+|..+..+
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 44445555555544 2333 3445555555555555 445555555566666666666655555555444
No 376
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.55 E-value=6e-16 Score=163.81 Aligned_cols=157 Identities=21% Similarity=0.246 Sum_probs=67.0
Q ss_pred EecCCCcccccCccccCCCCCCeEeCcCCcCCccCC----cccCCCC-CCCEEEccCCCCCCCCcccccCC-----CCCc
Q 005859 71 SLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIP----KEIASLS-ELSDLYLNVNNLSGKIPSQIGNM-----TNLQ 140 (673)
Q Consensus 71 ~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~L~ 140 (673)
+|+.|+++|.+|..+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|++++..+..|..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444444444444444444444444333 3344444 44444444444444444444332 4444
Q ss_pred EeeccCccccccCchhhcC----c-cccCeecccccccCccCCccc----cC-CCcccccccccccCCCCCc----cccc
Q 005859 141 VLQLCYNKLTGNIPTQLGS----L-RKLSVLALQYNQLTGAIPASL----GD-LGMLMRLDLSFNNLFGPVP----VKLA 206 (673)
Q Consensus 141 ~L~L~~N~l~~~~p~~l~~----l-~~L~~L~l~~N~l~~~~p~~~----~~-l~~L~~L~l~~N~l~~~~p----~~~~ 206 (673)
+|+|++|++++..+..+.. + ++|++|+|++|.+++..+..+ .. .++|++|+|++|.+++..+ ..+.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 4444444444443332222 2 444444444444443333222 11 1344444444444443221 1222
Q ss_pred CCC-CCCEEEccCCCCCcCCch
Q 005859 207 NVP-KLEVLDIRNNSFSGNVPP 227 (673)
Q Consensus 207 ~l~-~L~~L~l~~N~l~g~~p~ 227 (673)
.++ +|+.|+|++|++++..+.
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~ 185 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCA 185 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHH
T ss_pred cCCccccEeeecCCCCchhhHH
Confidence 232 444444444444444433
No 377
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.55 E-value=2.1e-14 Score=156.47 Aligned_cols=141 Identities=23% Similarity=0.275 Sum_probs=104.1
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..++.|++++|.+++ +|.. .++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 356666666666654 2211 1678888888888886 66 58888888888888888885 56543 58888888
Q ss_pred cCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCc
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
++|++++ +| .++.+++|++|++++|++++ +|... ++|+.|++++|.++ .+| .+..+++|+.|++++|++++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc
Confidence 8888886 56 58888888888888888875 45432 47888888888887 566 37788888888888888876
No 378
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=5.5e-17 Score=156.33 Aligned_cols=138 Identities=27% Similarity=0.304 Sum_probs=124.2
Q ss_pred ccCCCCCCeEeCcCCcCCccCCc------ccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhc
Q 005859 85 VGGLKSLTGLYLHFNALNGVIPK------EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLG 158 (673)
Q Consensus 85 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 158 (673)
+.....++.++|+.|.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 56678899999999999999887 89999999999999999996 67 8999999999999999999 6888888
Q ss_pred CccccCeecccccccCccCCccccCCCcccccccccccCCCCCc-ccccCCCCCCEEEccCCCCCcCCch
Q 005859 159 SLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVP-VKLANVPKLEVLDIRNNSFSGNVPP 227 (673)
Q Consensus 159 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~ 227 (673)
.+++|++|++++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|+.|++++|++++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 89999999999999996 55 68899999999999999986433 4788999999999999999987765
No 379
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.55 E-value=4.2e-16 Score=165.00 Aligned_cols=160 Identities=23% Similarity=0.230 Sum_probs=125.1
Q ss_pred CCEEEEEecCCCcccccC----ccccCCC-CCCeEeCcCCcCCccCCcccCCC-----CCCCEEEccCCCCCCCCccccc
Q 005859 65 GRVANISLQGKGLSGEIP----AAVGGLK-SLTGLYLHFNALNGVIPKEIASL-----SELSDLYLNVNNLSGKIPSQIG 134 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~ 134 (673)
..++.|+|++|.+++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 458899999999887766 6778888 89999999999988777777765 8999999999999877776544
Q ss_pred C----C-CCCcEeeccCccccccCchhhc----C-ccccCeecccccccCccC----CccccCCC-cccccccccccCCC
Q 005859 135 N----M-TNLQVLQLCYNKLTGNIPTQLG----S-LRKLSVLALQYNQLTGAI----PASLGDLG-MLMRLDLSFNNLFG 199 (673)
Q Consensus 135 ~----l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~l~~N~l~~~~----p~~~~~l~-~L~~L~l~~N~l~~ 199 (673)
. + ++|+.|+|++|++++..+..+. . .++|++|+|++|.++... +..+..++ +|+.|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 4 4 8899999999999877665544 3 258999999999988533 34445565 89999999999987
Q ss_pred CCcccc----cCC-CCCCEEEccCCCCCcC
Q 005859 200 PVPVKL----ANV-PKLEVLDIRNNSFSGN 224 (673)
Q Consensus 200 ~~p~~~----~~l-~~L~~L~l~~N~l~g~ 224 (673)
..+..+ ..+ ++|+.|+|++|.|+..
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 766544 344 5899999999998864
No 380
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=8.4e-15 Score=163.61 Aligned_cols=122 Identities=23% Similarity=0.266 Sum_probs=109.9
Q ss_pred CCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeeccc
Q 005859 90 SLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQ 169 (673)
Q Consensus 90 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 169 (673)
.|+.|+|++|.|++ +|. |+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+.+++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47789999999997 566 999999999999999999 889999999999999999999997 67 89999999999999
Q ss_pred ccccCccC-CccccCCCcccccccccccCCCCCccc---ccCCCCCCEEEc
Q 005859 170 YNQLTGAI-PASLGDLGMLMRLDLSFNNLFGPVPVK---LANVPKLEVLDI 216 (673)
Q Consensus 170 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~---~~~l~~L~~L~l 216 (673)
+|+|++.. |..|+.+++|+.|+|++|.+++.+|.. +..+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999876 999999999999999999999876532 334899999975
No 381
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=8.7e-15 Score=138.01 Aligned_cols=129 Identities=20% Similarity=0.214 Sum_probs=112.3
Q ss_pred CCEEEEEecCCCcccccCccccCCC-CCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEee
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLK-SLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (673)
..++.|+|++|+++. +|. +..+. +|++|+|++|.|++. +.|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 468999999999995 454 55555 999999999999976 6899999999999999999976556669999999999
Q ss_pred ccCccccccCch--hhcCccccCeecccccccCccCCcc----ccCCCcccccccccccCCC
Q 005859 144 LCYNKLTGNIPT--QLGSLRKLSVLALQYNQLTGAIPAS----LGDLGMLMRLDLSFNNLFG 199 (673)
Q Consensus 144 L~~N~l~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~~ 199 (673)
|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|+++.|.+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999997 5666 8999999999999999998 56664 8899999999999998753
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.52 E-value=6.3e-15 Score=165.91 Aligned_cols=160 Identities=27% Similarity=0.328 Sum_probs=97.1
Q ss_pred CcCCCCCCCCCCCCCCCceEE--------eCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCC
Q 005859 40 LLTSWAPNADPCSSDSFDGVA--------CDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIAS 111 (673)
Q Consensus 40 ~l~~w~~~~~~C~~~~w~gv~--------c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 111 (673)
.+..|....++|. |.|.. |. ...++.|++++|+|+ .+|..+. ++|++|+|++|.|+. +|. .
T Consensus 11 ~w~~W~~~~~~~~---~~~r~~~~~~~~~c~-~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~ 79 (622)
T 3g06_A 11 VWSAWRRAAPAEE---SRGRAAVVQKMRACL-NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---L 79 (622)
T ss_dssp HHHHHHHTCCGGG---HHHHHHHHHHHHHHH-HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---C
T ss_pred HHHHHHhcCCcch---hccccccCccccccc-CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---c
Confidence 3556765556664 75432 22 134677888888877 6676654 677888888887774 444 4
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccc
Q 005859 112 LSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLD 191 (673)
Q Consensus 112 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 191 (673)
+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|++++ +|.. +++|+.|+
T Consensus 80 l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~ 147 (622)
T 3g06_A 80 PPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS 147 (622)
T ss_dssp CTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE
Confidence 677777777777777 3554 56777777777777774 343 44566666666666653 4432 25566666
Q ss_pred cccccCCCCCcccc-----------------cCCCCCCEEEccCCCCCc
Q 005859 192 LSFNNLFGPVPVKL-----------------ANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 192 l~~N~l~~~~p~~~-----------------~~l~~L~~L~l~~N~l~g 223 (673)
|++|++++. |..+ ..+++|+.|++++|.|++
T Consensus 148 Ls~N~l~~l-~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 148 VSDNQLASL-PALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp CCSSCCSCC-CCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC
T ss_pred CcCCcCCCc-CCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC
Confidence 666655542 2211 122566666666666664
No 383
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=4.8e-14 Score=132.57 Aligned_cols=105 Identities=24% Similarity=0.320 Sum_probs=82.5
Q ss_pred EEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCc
Q 005859 68 ANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYN 147 (673)
Q Consensus 68 ~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 147 (673)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46788888884 6777664 78888888888888888888888888888888888888765666788888888888888
Q ss_pred cccccCchhhcCccccCeecccccccCc
Q 005859 148 KLTGNIPTQLGSLRKLSVLALQYNQLTG 175 (673)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 175 (673)
+|++..+..|..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 8886555567778888888888887763
No 384
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4.6e-14 Score=132.23 Aligned_cols=90 Identities=29% Similarity=0.265 Sum_probs=50.4
Q ss_pred CCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEc
Q 005859 137 TNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDI 216 (673)
Q Consensus 137 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 216 (673)
++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 34444444444444444444555555555555555555444444555556666666666666555555666777777777
Q ss_pred cCCCCCcCCc
Q 005859 217 RNNSFSGNVP 226 (673)
Q Consensus 217 ~~N~l~g~~p 226 (673)
++|++....+
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 7777766543
No 385
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=5.1e-14 Score=131.86 Aligned_cols=104 Identities=24% Similarity=0.311 Sum_probs=71.3
Q ss_pred EEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCcc
Q 005859 69 NISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNK 148 (673)
Q Consensus 69 ~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 148 (673)
.+++++|+|+. +|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45666666664 56554 2677777777777777777777777777777777777776655566777777777777777
Q ss_pred ccccCchhhcCccccCeecccccccCc
Q 005859 149 LTGNIPTQLGSLRKLSVLALQYNQLTG 175 (673)
Q Consensus 149 l~~~~p~~l~~l~~L~~L~l~~N~l~~ 175 (673)
|++..+..|..+++|++|+|++|.+..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 776555566667777777777776653
No 386
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=8.3e-14 Score=130.93 Aligned_cols=106 Identities=26% Similarity=0.292 Sum_probs=57.1
Q ss_pred CeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeeccccc
Q 005859 92 TGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYN 171 (673)
Q Consensus 92 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N 171 (673)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i------------------- 72 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAI------------------- 72 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-------------------
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCcc-------------------
Confidence 45666666664 3444332 4555555555555554455555555555555555555543
Q ss_pred ccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 172 QLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 172 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|...
T Consensus 73 -----~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 73 -----PTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp -----CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred -----ChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 333344555555555555555544444456666666666666666643
No 387
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.47 E-value=7.8e-14 Score=146.75 Aligned_cols=164 Identities=15% Similarity=0.145 Sum_probs=131.5
Q ss_pred EEeCCCCCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCc-ccccCCC
Q 005859 59 VACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIP-SQIGNMT 137 (673)
Q Consensus 59 v~c~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~ 137 (673)
..|+. + .++.++++|+ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.+++
T Consensus 7 C~C~~--~--~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~ 79 (350)
T 4ay9_X 7 CHCSN--R--VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 79 (350)
T ss_dssp SEEET--T--EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT
T ss_pred cEeeC--C--EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch
Confidence 46743 3 4677889988 678766 4789999999999997777789999999999999999977665 4689999
Q ss_pred CCcE-eeccCccccccCchhhcCccccCeecccccccCccCCccccCCCccccccccc-ccCCCCCcccccCCC-CCCEE
Q 005859 138 NLQV-LQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSF-NNLFGPVPVKLANVP-KLEVL 214 (673)
Q Consensus 138 ~L~~-L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~-~L~~L 214 (673)
+|+. +.+++|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|
T Consensus 80 ~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L 159 (350)
T 4ay9_X 80 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVIL 159 (350)
T ss_dssp TCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEE
T ss_pred hhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhh
Confidence 8775 67788999988899999999999999999999977666777777788888865 566655555666664 58889
Q ss_pred EccCCCCCcCCchhh
Q 005859 215 DIRNNSFSGNVPPAL 229 (673)
Q Consensus 215 ~l~~N~l~g~~p~~l 229 (673)
+|++|+|+...+..+
T Consensus 160 ~L~~N~i~~i~~~~f 174 (350)
T 4ay9_X 160 WLNKNGIQEIHNSAF 174 (350)
T ss_dssp ECCSSCCCEECTTSS
T ss_pred ccccccccCCChhhc
Confidence 999999985444333
No 388
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=4.9e-13 Score=140.43 Aligned_cols=107 Identities=24% Similarity=0.326 Sum_probs=94.0
Q ss_pred CCceEEeCCCCCEEEEEecCC-CcccccCccccCCCCCCeEeCcC-CcCCccCCcccCCCCCCCEEEccCCCCCCCCccc
Q 005859 55 SFDGVACDENGRVANISLQGK-GLSGEIPAAVGGLKSLTGLYLHF-NALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQ 132 (673)
Q Consensus 55 ~w~gv~c~~~~~v~~l~l~~~-~l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 132 (673)
.|..|.|+ ++ +|++ +|. |..+++|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++..|..
T Consensus 9 ~~~~v~~~-----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 9 GSSGLRCT-----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSCEECC-----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred cCCEEEcC-----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 37667664 44 6774 788 99999999999996 9999988899999999999999999999999999
Q ss_pred ccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCc
Q 005859 133 IGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTG 175 (673)
Q Consensus 133 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 175 (673)
|.+|++|+.|+|++|+|++..+..|..++ |+.|+|.+|.|..
T Consensus 76 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred hcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999999999999999977666777776 9999999999974
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.40 E-value=7.5e-15 Score=160.49 Aligned_cols=165 Identities=19% Similarity=0.120 Sum_probs=91.3
Q ss_pred CCEEEEEecCCCcccccCcccc-----CCCCCCeEeCcCCcCCcc----CCcccCCCCCCCEEEccCCCCCCCC-----c
Q 005859 65 GRVANISLQGKGLSGEIPAAVG-----GLKSLTGLYLHFNALNGV----IPKEIASLSELSDLYLNVNNLSGKI-----P 130 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~-----p 130 (673)
..++.|+|++|.+++..+..+. .+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++.. +
T Consensus 170 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~ 249 (461)
T 1z7x_W 170 PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCP 249 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHH
Confidence 3566677777666654333332 245666666666666642 4555556666666666666665321 2
Q ss_pred ccccCCCCCcEeeccCcccccc----CchhhcCccccCeecccccccCccCCccccC-----CCcccccccccccCCCC-
Q 005859 131 SQIGNMTNLQVLQLCYNKLTGN----IPTQLGSLRKLSVLALQYNQLTGAIPASLGD-----LGMLMRLDLSFNNLFGP- 200 (673)
Q Consensus 131 ~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~- 200 (673)
..+..+++|+.|+|++|.++.. ++..+..+++|++|++++|.+.+..+..+.. .++|+.|+|++|.+++.
T Consensus 250 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 329 (461)
T 1z7x_W 250 GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC 329 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH
Confidence 2223456666666666666643 4555555666666666666665433322221 24666666666666543
Q ss_pred ---CcccccCCCCCCEEEccCCCCCcCCchhh
Q 005859 201 ---VPVKLANVPKLEVLDIRNNSFSGNVPPAL 229 (673)
Q Consensus 201 ---~p~~~~~l~~L~~L~l~~N~l~g~~p~~l 229 (673)
++..+..+++|+.|++++|.+++..+..+
T Consensus 330 ~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l 361 (461)
T 1z7x_W 330 CSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361 (461)
T ss_dssp HHHHHHHHHHCSSCCEEECCSSBCHHHHHHHH
T ss_pred HHHHHHHHhhCCCccEEEccCCccccccHHHH
Confidence 34444555666666666666655444333
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.38 E-value=9.6e-15 Score=159.62 Aligned_cols=169 Identities=22% Similarity=0.222 Sum_probs=134.7
Q ss_pred CCEEEEEecCCCcccc----cCccccCCCCCCeEeCcCCcCCccC-----CcccCCCCCCCEEEccCCCCCCC----Ccc
Q 005859 65 GRVANISLQGKGLSGE----IPAAVGGLKSLTGLYLHFNALNGVI-----PKEIASLSELSDLYLNVNNLSGK----IPS 131 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~ 131 (673)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.++... +..+..+++|++|++++|.++.. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 3788999999999874 6778888999999999999987532 33344689999999999999854 677
Q ss_pred cccCCCCCcEeeccCccccccCchhhcCc-----cccCeecccccccCcc----CCccccCCCcccccccccccCCCCCc
Q 005859 132 QIGNMTNLQVLQLCYNKLTGNIPTQLGSL-----RKLSVLALQYNQLTGA----IPASLGDLGMLMRLDLSFNNLFGPVP 202 (673)
Q Consensus 132 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p 202 (673)
.+..+++|+.|+|++|.+++..+..+... ++|+.|++++|.+++. ++..+..+++|+.|+|++|.+++..+
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 78889999999999999986555444432 6899999999999865 56667788999999999999876555
Q ss_pred ccccC-----CCCCCEEEccCCCCCc----CCchhhhhcc
Q 005859 203 VKLAN-----VPKLEVLDIRNNSFSG----NVPPALKRLN 233 (673)
Q Consensus 203 ~~~~~-----l~~L~~L~l~~N~l~g----~~p~~l~~~~ 233 (673)
..+.. .++|+.|++++|.+++ .+|..+..+.
T Consensus 359 ~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~ 398 (461)
T 1z7x_W 359 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH 398 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCC
Confidence 44432 6789999999999986 6777776554
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=2.3e-12 Score=135.21 Aligned_cols=90 Identities=23% Similarity=0.193 Sum_probs=44.4
Q ss_pred ccCCCCCcEeeccC-ccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCC
Q 005859 133 IGNMTNLQVLQLCY-NKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKL 211 (673)
Q Consensus 133 ~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 211 (673)
|..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444444444444444444444444444444555555555555555544333444333 6
Q ss_pred CEEEccCCCCCc
Q 005859 212 EVLDIRNNSFSG 223 (673)
Q Consensus 212 ~~L~l~~N~l~g 223 (673)
+.|+|++|+|..
T Consensus 106 ~~l~l~~N~~~c 117 (347)
T 2ifg_A 106 QELVLSGNPLHC 117 (347)
T ss_dssp CEEECCSSCCCC
T ss_pred eEEEeeCCCccC
Confidence 666676666664
No 392
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=5.6e-14 Score=148.70 Aligned_cols=167 Identities=19% Similarity=0.229 Sum_probs=127.6
Q ss_pred CCEEEEEecCCCcccccCccccCC-----CCCCeEeCcCCcCCccCCccc-CCCCCCCEEEccCCCCCCCCcccc-----
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGL-----KSLTGLYLHFNALNGVIPKEI-ASLSELSDLYLNVNNLSGKIPSQI----- 133 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~----- 133 (673)
..+..|+|++|.++......+..+ ++|+.|+|++|.|+......+ ..+++|+.|+|++|+++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 468899999999986544444333 799999999999975433333 346789999999999985444444
Q ss_pred cCCCCCcEeeccCccccc----cCchhhcCccccCeecccccccCcc----CCccccCCCcccccccccccCCCC----C
Q 005859 134 GNMTNLQVLQLCYNKLTG----NIPTQLGSLRKLSVLALQYNQLTGA----IPASLGDLGMLMRLDLSFNNLFGP----V 201 (673)
Q Consensus 134 ~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~ 201 (673)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.|... ++..+...++|+.|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 346899999999999974 3455667889999999999999753 355677788999999999999753 3
Q ss_pred cccccCCCCCCEEEccCCCCCcCCchhhhh
Q 005859 202 PVKLANVPKLEVLDIRNNSFSGNVPPALKR 231 (673)
Q Consensus 202 p~~~~~l~~L~~L~l~~N~l~g~~p~~l~~ 231 (673)
+..+...++|+.|+|++|.|+..-...+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 344556789999999999998655555544
No 393
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.25 E-value=7.5e-12 Score=130.34 Aligned_cols=134 Identities=13% Similarity=0.120 Sum_probs=78.5
Q ss_pred CCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccC--------------------------------
Q 005859 88 LKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGN-------------------------------- 135 (673)
Q Consensus 88 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-------------------------------- 135 (673)
+++|+.|+|++ .++..-+..|.++++|+.|++++|.+....+..|.+
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 77777777777 666666667777777777777777664333333333
Q ss_pred ----------------------------------------------CCCCcEeeccCccccccCchhhcCccccCeeccc
Q 005859 136 ----------------------------------------------MTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQ 169 (673)
Q Consensus 136 ----------------------------------------------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 169 (673)
+++|+.|+|++|+++...+..|.++++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 4455566666655554444455566666666665
Q ss_pred ccccCccCCccccCCCccc-ccccccccCCCCCcccccCCCCCCEEEccCCCCCcC
Q 005859 170 YNQLTGAIPASLGDLGMLM-RLDLSFNNLFGPVPVKLANVPKLEVLDIRNNSFSGN 224 (673)
Q Consensus 170 ~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 224 (673)
+| ++..-+..|.++.+|+ .|++.+ .++...+.+|.++++|+.|++++|++...
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 55 4444444555666665 666655 44444445556666666666655555543
No 394
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25 E-value=2.2e-11 Score=122.41 Aligned_cols=146 Identities=11% Similarity=0.047 Sum_probs=111.5
Q ss_pred HHHHhcCCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CCCceeEeeEEecCCCCe
Q 005859 397 VERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HENLASLRGICCSKGRGE 475 (673)
Q Consensus 397 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 475 (673)
+...-..|.....++.|+.+.||++... ++.+++|+..... ......+.+|+++++.+. |..+.++++++.. .+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~-~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~--~~~ 84 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRY-KGTTYDVEREKDMMLWLEGKLPVPKVLHFERH--DGW 84 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGG-TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE--TTE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCccc-CCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec--CCc
Confidence 3444567888888888999999999754 6889999987532 122346889999999984 6778889988754 367
Q ss_pred EEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCC------------------------------
Q 005859 476 CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR------------------------------ 525 (673)
Q Consensus 476 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------ 525 (673)
.|+||||++|.+|.+.+. +......++.+++++|+.||+..
T Consensus 85 ~~lv~e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC 155 (263)
T ss_dssp EEEEEECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSG
T ss_pred eEEEEEecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccc
Confidence 899999999999887642 11123467889999999999810
Q ss_pred ---------------------------CCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 526 ---------------------------PGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 526 ---------------------------~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
+.++|+|++|.||+++++..+.|.||+.+.
T Consensus 156 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 358999999999999876566799998764
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.13 E-value=1e-10 Score=121.62 Aligned_cols=149 Identities=13% Similarity=0.060 Sum_probs=124.6
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccC----------------------------------
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA---------------------------------- 110 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---------------------------------- 110 (673)
..++.|+|++ +++..-+.+|.++++|+.|+|++|.+....+..|.
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 4678888988 88766667899999999999999986322221111
Q ss_pred --------------------------------------------CCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccC
Q 005859 111 --------------------------------------------SLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCY 146 (673)
Q Consensus 111 --------------------------------------------~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 146 (673)
.+++|+.|+|++|+++...+..|.++++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 267999999999999977777899999999999999
Q ss_pred ccccccCchhhcCccccC-eecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEc
Q 005859 147 NKLTGNIPTQLGSLRKLS-VLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDI 216 (673)
Q Consensus 147 N~l~~~~p~~l~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 216 (673)
| ++..-+..|.++++|+ .|++.+ .++..-+..|.++++|+.|+++.|++....+.+|.++++|+.+..
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 8 8767778999999999 999998 787677789999999999999999999877889999999999864
No 396
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=1.1e-10 Score=116.86 Aligned_cols=136 Identities=17% Similarity=0.137 Sum_probs=98.0
Q ss_pred CCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCC--ceeEeeEEecCCCCeEEEEE
Q 005859 403 CFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN--LASLRGICCSKGRGECFLIY 480 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~~~lv~ 480 (673)
.+....+.+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++... .+..++||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~--~~~~~~v~ 94 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTE--AGRDWLLL 94 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC--SSCEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccC--CCCCEEEE
Confidence 34443333456669999998777888999987543 2245788999999986545 4567777643 35689999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR----------------------------------- 525 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 525 (673)
||++|.+|. ... .+ ...++.++++.|+.||+..
T Consensus 95 e~i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 95 GEVPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp ECCSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EecCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 999998884 220 11 1256778888888888642
Q ss_pred ---------------------CCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 526 ---------------------PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 526 ---------------------~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
++++|+|++|.||+++++..+.|.|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 1399999999999998876677999998753
No 397
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.11 E-value=2.3e-10 Score=120.60 Aligned_cols=145 Identities=15% Similarity=0.231 Sum_probs=106.0
Q ss_pred cccccccCCcceEEEEEEcCCcEEEEEEec--ccCCCCcHHHHHHHHHHHhccC--CCCceeEeeEEecCCC-CeEEEEE
Q 005859 406 EANLLGKSSFSATYKGILRDGSVVAVKCIA--KTSCKSDEGEFLKGLKILTSLK--HENLASLRGICCSKGR-GECFLIY 480 (673)
Q Consensus 406 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~-~~~~lv~ 480 (673)
..+.|+.|.++.||+....+ ..+++|+.. ..........+.+|+++++.+. +..+.++++++.+.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998764 577888775 3322223456888999999996 4567888888754321 4578999
Q ss_pred eecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 005859 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK------------------------------------ 524 (673)
Q Consensus 481 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------ 524 (673)
||++|..+.+... ..++...+..++.++++.|+.||..
T Consensus 121 e~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9999987754221 2367888889999999999999972
Q ss_pred --------------------CCCcccCCcCCCCeEecCCCC--eeeccccccccc
Q 005859 525 --------------------RPGLVHPNLSAEKVLIHRRYN--PLLSDSGLHKLL 557 (673)
Q Consensus 525 --------------------~~~ivHrDlk~~NILl~~~~~--~kl~DfGla~~~ 557 (673)
.+.++|+|+++.||+++.++. +.|.||+.+..-
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246999999999999997753 589999998753
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.02 E-value=6.6e-12 Score=132.77 Aligned_cols=158 Identities=20% Similarity=0.202 Sum_probs=116.8
Q ss_pred CCEEEEEecCCCcccccCccc-cCCCCCCeEeCcCCcCCccCCccc-----CCCCCCCEEEccCCCCCC----CCccccc
Q 005859 65 GRVANISLQGKGLSGEIPAAV-GGLKSLTGLYLHFNALNGVIPKEI-----ASLSELSDLYLNVNNLSG----KIPSQIG 134 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~----~~p~~~~ 134 (673)
..++.|+|++|.++..-...+ ..+++|+.|+|++|.|+......+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 479999999999976543333 357889999999999985444444 356899999999999974 2455667
Q ss_pred CCCCCcEeeccCcccccc----CchhhcCccccCeecccccccCcc----CCccccCCCcccccccccccCCCCCccccc
Q 005859 135 NMTNLQVLQLCYNKLTGN----IPTQLGSLRKLSVLALQYNQLTGA----IPASLGDLGMLMRLDLSFNNLFGPVPVKLA 206 (673)
Q Consensus 135 ~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 206 (673)
.+++|++|+|++|.++.. ++..+...++|++|+|++|.|+.. ++..+...++|+.|+|++|.|+..-...+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 899999999999999853 356677888999999999999753 444566678999999999999865444443
Q ss_pred CCC---C--CCEEE--ccCCCCC
Q 005859 207 NVP---K--LEVLD--IRNNSFS 222 (673)
Q Consensus 207 ~l~---~--L~~L~--l~~N~l~ 222 (673)
.+. . |+.+. +..|.++
T Consensus 261 ~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 261 DLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HCC------CEEECCCC----CH
T ss_pred HHhcCCCccchhhHhhhcCCccC
Confidence 332 1 66666 6666654
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.02 E-value=1.3e-11 Score=139.16 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=79.9
Q ss_pred CEEEEEecCCCcc-cccCccccCCCCCCeEeCc-----------CCcCCcc-CCcccCCCCCCCEEEccCCCCCCCCccc
Q 005859 66 RVANISLQGKGLS-GEIPAAVGGLKSLTGLYLH-----------FNALNGV-IPKEIASLSELSDLYLNVNNLSGKIPSQ 132 (673)
Q Consensus 66 ~v~~l~l~~~~l~-g~~p~~~~~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 132 (673)
++..|+|. +.+. +.++..+..+++|++|+|+ .|.+++. ++..+..+++|++|+++.|++++..+..
T Consensus 319 ~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 319 NLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp TCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred CCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 55666666 3333 2233334556666666666 2455432 1222334566666666666666554545
Q ss_pred ccC-CCCCcEeecc----Ccccccc-----CchhhcCccccCeeccccc--ccCccCCcccc-CCCcccccccccccCCC
Q 005859 133 IGN-MTNLQVLQLC----YNKLTGN-----IPTQLGSLRKLSVLALQYN--QLTGAIPASLG-DLGMLMRLDLSFNNLFG 199 (673)
Q Consensus 133 ~~~-l~~L~~L~L~----~N~l~~~-----~p~~l~~l~~L~~L~l~~N--~l~~~~p~~~~-~l~~L~~L~l~~N~l~~ 199 (673)
+.. +++|+.|+|+ .|.+++. ++..+.++++|+.|++++| .+++..+..+. .+++|+.|+|++|++++
T Consensus 398 l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 444 5666666664 4555542 2233445566666666532 24433333332 25556666666665554
Q ss_pred C-CcccccCCCCCCEEEccCCCCCc
Q 005859 200 P-VPVKLANVPKLEVLDIRNNSFSG 223 (673)
Q Consensus 200 ~-~p~~~~~l~~L~~L~l~~N~l~g 223 (673)
. ++..+.++++|+.|++++|+|++
T Consensus 478 ~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 478 EGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHHHHHHhcCcccCeeeccCCCCcH
Confidence 2 23334455566666666666543
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.90 E-value=1.1e-10 Score=131.42 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=118.6
Q ss_pred CEEEEEecCCC-ccc-ccCccccCCCCCCeEeCcCCcCCcc----CCcccCCCCCCCEEEccCCCCCC----CCcccccC
Q 005859 66 RVANISLQGKG-LSG-EIPAAVGGLKSLTGLYLHFNALNGV----IPKEIASLSELSDLYLNVNNLSG----KIPSQIGN 135 (673)
Q Consensus 66 ~v~~l~l~~~~-l~g-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~ 135 (673)
+++.|+|+++. ++. .++..+.++++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48999998876 221 1333345789999999999998765 44456678999999999999983 34556678
Q ss_pred CCCCcEeeccCccccccCchhhcCccccCeecccccccC---ccCCccccCCCcccccccccccCCCCCcccccCCCCCC
Q 005859 136 MTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLT---GAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLE 212 (673)
Q Consensus 136 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 212 (673)
+++|+.|+|++|.+.+ +|..+..+++|+.|+++.+... +..+..+..+++|+.|+++++. .+.+|..+..+++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCc
Confidence 9999999999999986 7788999999999999864332 2344556777788888887753 335666777778888
Q ss_pred EEEccCCCCCcCC
Q 005859 213 VLDIRNNSFSGNV 225 (673)
Q Consensus 213 ~L~l~~N~l~g~~ 225 (673)
.|+|++|.+++..
T Consensus 297 ~L~Ls~~~l~~~~ 309 (592)
T 3ogk_B 297 KLDLLYALLETED 309 (592)
T ss_dssp EEEETTCCCCHHH
T ss_pred EEecCCCcCCHHH
Confidence 8888888876543
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.89 E-value=6e-12 Score=125.44 Aligned_cols=117 Identities=19% Similarity=0.220 Sum_probs=50.3
Q ss_pred CCceEEeCCCC-CEEEEEecC---CCcccccCc-cccCCCCCCeEeCcCCcCCccCCc-ccCCCCCCCE--EEccCCCCC
Q 005859 55 SFDGVACDENG-RVANISLQG---KGLSGEIPA-AVGGLKSLTGLYLHFNALNGVIPK-EIASLSELSD--LYLNVNNLS 126 (673)
Q Consensus 55 ~w~gv~c~~~~-~v~~l~l~~---~~l~g~~p~-~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~--L~l~~N~l~ 126 (673)
.|.|+.|+..+ +|..+-..+ ..+.|.+++ .+..|+. .|...+|..++.++- .|...+.|.. ++++.|+..
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 39999998654 665555544 233344432 2222222 233333333322221 1222333333 344444322
Q ss_pred CCCcc----cccCCCCCcEeeccCccccc--cCchhhcCccccCeecccccccC
Q 005859 127 GKIPS----QIGNMTNLQVLQLCYNKLTG--NIPTQLGSLRKLSVLALQYNQLT 174 (673)
Q Consensus 127 ~~~p~----~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~l~~N~l~ 174 (673)
.++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 157 -~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 157 -CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp -HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred -HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 1111 11334455555555555554 23344444555555555555554
No 402
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.82 E-value=1.5e-09 Score=111.49 Aligned_cols=187 Identities=16% Similarity=0.151 Sum_probs=117.9
Q ss_pred ccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhcc-CCCC--ceeEeeEEecCC-CCeEEEEEee
Q 005859 407 ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHEN--LASLRGICCSKG-RGECFLIYDF 482 (673)
Q Consensus 407 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~n--iv~l~~~~~~~~-~~~~~lv~E~ 482 (673)
.+.++.|.+..||+.. ..+++|+.... .....+.+|+++|+.+ .+.. +.+++....... ....|+||||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 3458899999999863 46888876432 2346788999999888 3333 334444332111 1235789999
Q ss_pred cCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 005859 483 VPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-------------------------------------- 524 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 524 (673)
++|.++.+... ..++..++..++.++++.++.||..
T Consensus 98 i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 99988764322 2356677777888888888888751
Q ss_pred ------------------CCCcccCCcCCCCeEecC--CCCeeeccccccccccCcchhhhhccC----C---------C
Q 005859 525 ------------------RPGLVHPNLSAEKVLIHR--RYNPLLSDSGLHKLLADDIVFSMLKAS----A---------A 571 (673)
Q Consensus 525 ------------------~~~ivHrDlk~~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~~----g---------t 571 (673)
.+.++|+|++|.||++++ ...+.|.||+.+..-............ + .
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 135799999999999998 456789999998754321111000000 0 0
Q ss_pred CCccC-CccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 005859 572 MGYLA-PEYTTTGRFTEKSDIYAFGMIVFQILSGKCSI 608 (673)
Q Consensus 572 ~~y~a-PE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~ 608 (673)
.++.. |+... +.....+.|++|.++|++.+|+.+|
T Consensus 252 Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00111 12111 1122368999999999999998654
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.72 E-value=1.3e-09 Score=122.75 Aligned_cols=129 Identities=15% Similarity=0.127 Sum_probs=84.2
Q ss_pred CCEEEEEecCCCcccccCcccc-CCCCCCeEeCcCC-cCCcc-CCcccCCCCCCCEEEccCCCCCCCCccccc----CCC
Q 005859 65 GRVANISLQGKGLSGEIPAAVG-GLKSLTGLYLHFN-ALNGV-IPKEIASLSELSDLYLNVNNLSGKIPSQIG----NMT 137 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~l~ 137 (673)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4678888888888777666665 6788888888887 45432 444445778888888888887765544443 566
Q ss_pred CCcEeeccCcc--ccc-cCchhhcCccccCeeccccc-ccCccCCccccCCCccccccccc
Q 005859 138 NLQVLQLCYNK--LTG-NIPTQLGSLRKLSVLALQYN-QLTGAIPASLGDLGMLMRLDLSF 194 (673)
Q Consensus 138 ~L~~L~L~~N~--l~~-~~p~~l~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~ 194 (673)
+|+.|+|++|. ++. .++..+..+++|+.|++++| .+. .+|..+..+++|+.|+++.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGG 244 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSB
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEccccc
Confidence 88888888876 221 11122344578888888877 333 3555566666666666443
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.70 E-value=3.2e-10 Score=127.79 Aligned_cols=156 Identities=17% Similarity=0.183 Sum_probs=75.8
Q ss_pred CCEEEEEecCCCcccc-cCccccCCCCCCeEeC---------cCCcCCccCCcccC-CCCCCCEEEccCCCCCCCCcccc
Q 005859 65 GRVANISLQGKGLSGE-IPAAVGGLKSLTGLYL---------HFNALNGVIPKEIA-SLSELSDLYLNVNNLSGKIPSQI 133 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~-~p~~~~~l~~L~~L~L---------~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~ 133 (673)
.++..|+++++ +... ++.....+++|++|+| ..|.+++.....+. .+++|+.|+++.|.+++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 35667777766 3322 2222234666777766 23444432222222 25666666666666654444444
Q ss_pred c-CCCCCcEeecc--C----cccccc-----CchhhcCccccCeecccccccCccCCccccC-CCcccccccccccCCCC
Q 005859 134 G-NMTNLQVLQLC--Y----NKLTGN-----IPTQLGSLRKLSVLALQYNQLTGAIPASLGD-LGMLMRLDLSFNNLFGP 200 (673)
Q Consensus 134 ~-~l~~L~~L~L~--~----N~l~~~-----~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~ 200 (673)
. .+++|+.|+|+ + |.++.. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 3 35666666666 2 344311 111244455566666644 444333333333 55555666665555443
Q ss_pred Ccccc-cCCCCCCEEEccCCCCC
Q 005859 201 VPVKL-ANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 201 ~p~~~-~~l~~L~~L~l~~N~l~ 222 (673)
.+..+ .++++|+.|+|++|+++
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHHhcCCCcCEEECcCCCCc
Confidence 33222 34555566666665553
No 405
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.68 E-value=5.3e-08 Score=103.77 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=93.4
Q ss_pred CCEEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeec
Q 005859 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144 (673)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 144 (673)
..+..++|++|+++-.-...|. ..+|+.+.|..| ++..-...|.++++|+.+++..| ++..-..+|.+ ++|+.+.|
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 3577888888877754445555 578888888744 66566667778888888888764 44344455555 56666666
Q ss_pred cCccccccCchhhcCccccCeecccccccC-----ccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccCC
Q 005859 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLT-----GAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNN 219 (673)
Q Consensus 145 ~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 219 (673)
.|.++..-+..|.++++|+.+++.+|.+. ...+..|.++++|+.++|. |.+......+|.++++|+.++|.+|
T Consensus 256 -p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred -CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 34455444556666666776666666553 2334456666666666666 3355444556666666666666443
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.65 E-value=5.5e-09 Score=109.49 Aligned_cols=162 Identities=14% Similarity=0.168 Sum_probs=101.4
Q ss_pred CEEEEEecCCCc---------ccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCccccc--
Q 005859 66 RVANISLQGKGL---------SGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIG-- 134 (673)
Q Consensus 66 ~v~~l~l~~~~l---------~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-- 134 (673)
++..|.+.++.. .+.++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++......+.
T Consensus 140 ~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~ 216 (362)
T 2ra8_A 140 HFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGS 216 (362)
T ss_dssp TCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHS
T ss_pred hhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHc
Confidence 567777755432 1234455667788888888887311 2333 33 78888888888877643333343
Q ss_pred CCCCCcEeeccC--cccccc-----Cchhh--cCccccCeecccccccCccCCccc---cCCCcccccccccccCCCC--
Q 005859 135 NMTNLQVLQLCY--NKLTGN-----IPTQL--GSLRKLSVLALQYNQLTGAIPASL---GDLGMLMRLDLSFNNLFGP-- 200 (673)
Q Consensus 135 ~l~~L~~L~L~~--N~l~~~-----~p~~l--~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~-- 200 (673)
.+++|+.|+|+. |...+. +...+ ..+++|++|+|.+|.+....+..+ ..+++|+.|+|+.|.+.+.
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 688888888853 222211 11222 247888899998888865433333 2577888999988888763
Q ss_pred --CcccccCCCCCCEEEccCCCCCcCCchhhh
Q 005859 201 --VPVKLANVPKLEVLDIRNNSFSGNVPPALK 230 (673)
Q Consensus 201 --~p~~~~~l~~L~~L~l~~N~l~g~~p~~l~ 230 (673)
++..+..+++|+.|+|++|.++...-..+.
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~ 328 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNYLSDEMKKELQ 328 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBBCCHHHHHHHH
T ss_pred HHHHhhcccCCcceEEECCCCcCCHHHHHHHH
Confidence 233344568888999988887754333343
No 407
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.64 E-value=1.2e-07 Score=101.07 Aligned_cols=145 Identities=14% Similarity=0.081 Sum_probs=81.8
Q ss_pred EEEEEecCCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccC
Q 005859 67 VANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCY 146 (673)
Q Consensus 67 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 146 (673)
++.+.|.+ .+...-+.+|.++++|+.++|++|.++......|. ..+|+.+.|.+| +...-..+|.++++|+.++|..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44555543 44433344566666666666666666644444444 456666666533 4444455566666666666665
Q ss_pred ccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCC-----CCCcccccCCCCCCEEEcc
Q 005859 147 NKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLF-----GPVPVKLANVPKLEVLDIR 217 (673)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~l~ 217 (673)
| ++..-...|.+ .+|+.+.| .|.++..-+..|.++++|+.+++.+|.+. ...+.+|.++++|+.++|.
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 4 34333445555 55666666 34454444556666777777777666554 2334556666777777666
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.60 E-value=4e-09 Score=105.05 Aligned_cols=105 Identities=25% Similarity=0.301 Sum_probs=73.8
Q ss_pred ccCCCCCCe--EeCcCCcCC---ccCCcccCCCCCCCEEEccCCCCCC--CCcccccCCCCCcEeeccCccccccCchhh
Q 005859 85 VGGLKSLTG--LYLHFNALN---GVIPKEIASLSELSDLYLNVNNLSG--KIPSQIGNMTNLQVLQLCYNKLTGNIPTQL 157 (673)
Q Consensus 85 ~~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 157 (673)
|...+.|.. ++++.|... +.++-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 455556665 778888533 3333333568899999999999997 4567788899999999999999965 334
Q ss_pred cCcc--ccCeecccccccCccCCc-------cccCCCcccccc
Q 005859 158 GSLR--KLSVLALQYNQLTGAIPA-------SLGDLGMLMRLD 191 (673)
Q Consensus 158 ~~l~--~L~~L~l~~N~l~~~~p~-------~~~~l~~L~~L~ 191 (673)
..+. +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 788888888888876652 244555555554
No 409
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.55 E-value=2.5e-07 Score=95.56 Aligned_cols=137 Identities=17% Similarity=0.125 Sum_probs=98.6
Q ss_pred CCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCC----CCceeEeeEEecCCCCeEEE
Q 005859 403 CFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH----ENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~~~l 478 (673)
.....+.++.|....||+. |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~---~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~------~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD---SVRISQKRELELYRFLENCKLSYQIPAVVYQ------SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE------CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH---HHHHHHHHHHHHHHHHHhcCCCCCcceEEec------CCcEE
Confidence 4556778999999999998 667888876432 123568899999988866 223444443 23579
Q ss_pred EEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 005859 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR--------------------------------- 525 (673)
Q Consensus 479 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------- 525 (673)
||||++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 105 vme~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 105 IMKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 999999988863321 12556666777777888877777521
Q ss_pred ----------------------------CCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 526 ----------------------------PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 526 ----------------------------~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
+.++|+|++|.||+++.+..+.|.||+.+..-.
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999986543
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=7.3e-09 Score=97.96 Aligned_cols=122 Identities=11% Similarity=0.051 Sum_probs=61.2
Q ss_pred cCccccCCCCCCeEeCcCC-cCCc----cCCcccCCCCCCCEEEccCCCCCCC----CcccccCCCCCcEeeccCccccc
Q 005859 81 IPAAVGGLKSLTGLYLHFN-ALNG----VIPKEIASLSELSDLYLNVNNLSGK----IPSQIGNMTNLQVLQLCYNKLTG 151 (673)
Q Consensus 81 ~p~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 151 (673)
+...+...+.|++|+|++| .|.. .+...+...++|++|+|++|.+... +...+...++|++|+|++|.+..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344555666777777766 6652 1233444555666666666665421 12233334455555555555542
Q ss_pred cCchhhcCccccCeecccccccCccCCccccCCCccccccc--ccccCCCC----CcccccCCCCCCEEEccCCCCC
Q 005859 152 NIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDL--SFNNLFGP----VPVKLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 152 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 222 (673)
.--. .+...+...++|+.|+| ++|.+... +...+...++|+.|+|++|.+.
T Consensus 108 ~g~~--------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGIL--------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHH--------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHH--------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1000 12223333444555555 44544432 2233444567888888888764
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.47 E-value=5.8e-07 Score=91.14 Aligned_cols=142 Identities=16% Similarity=0.213 Sum_probs=93.2
Q ss_pred ccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCC---CceeEeeEEecCCCCeEEEEEe
Q 005859 405 SEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHE---NLASLRGICCSKGRGECFLIYD 481 (673)
Q Consensus 405 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~~lv~E 481 (673)
...+.|+.|.++.||++...+|+.++||+..... ......|.+|++.|+.+.+. .+.+++++. ..++|||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lvme 90 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAME 90 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEEEE
Confidence 3456799999999999999889999999865432 22346789999999999765 577777653 2489999
Q ss_pred ecCCCChhh--------h---hccccCC-----------------ccccCHHHHH-----------------------HH
Q 005859 482 FVPNGNLLQ--------H---LDLEAGS-----------------EKVLEWATRI-----------------------SV 510 (673)
Q Consensus 482 ~~~~gsL~~--------~---l~~~~~~-----------------~~~l~~~~~~-----------------------~i 510 (673)
|++++.+.. . +|..... ...-+|.... ..
T Consensus 91 ~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~ 170 (288)
T 3d1u_A 91 WVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRL 170 (288)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHH
T ss_pred ecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 999987531 1 2211100 0012344221 11
Q ss_pred HHHHHHHHHH-H-hcCCCCcccCCcCCCCeEecCCCCeeeccccccc
Q 005859 511 IKGIAKGISY-L-HGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555 (673)
Q Consensus 511 ~~~ia~gL~y-L-H~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~ 555 (673)
+.+++..+.- + +...+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 171 ~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 171 VEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 1122222221 1 3345679999999999999884 5889999 654
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.47 E-value=2.9e-08 Score=104.01 Aligned_cols=159 Identities=16% Similarity=0.166 Sum_probs=109.9
Q ss_pred CCCEEEEEecCCCccc-c-------cCccccCCCCCCeEeCcCCcCC---------ccCCcccCCCCCCCEEEccCCCCC
Q 005859 64 NGRVANISLQGKGLSG-E-------IPAAVGGLKSLTGLYLHFNALN---------GVIPKEIASLSELSDLYLNVNNLS 126 (673)
Q Consensus 64 ~~~v~~l~l~~~~l~g-~-------~p~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~l~~N~l~ 126 (673)
..+|+.|.+...+..| . +..++..+++|+.|.+..+.+. +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3568888888776553 2 2334667899999999766432 234455677899999999988411
Q ss_pred CCCcccccCCCCCcEeeccCccccccCchhhc--CccccCeecccc--cccCcc-----CCccc--cCCCcccccccccc
Q 005859 127 GKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLG--SLRKLSVLALQY--NQLTGA-----IPASL--GDLGMLMRLDLSFN 195 (673)
Q Consensus 127 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N 195 (673)
.++. +. +++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+|
T Consensus 186 -~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~ 262 (362)
T 2ra8_A 186 -SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDA 262 (362)
T ss_dssp -BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESC
T ss_pred -eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCC
Confidence 3444 43 89999999999988754444454 789999999863 322111 11222 35789999999999
Q ss_pred cCCCCCccccc---CCCCCCEEEccCCCCCcCC
Q 005859 196 NLFGPVPVKLA---NVPKLEVLDIRNNSFSGNV 225 (673)
Q Consensus 196 ~l~~~~p~~~~---~l~~L~~L~l~~N~l~g~~ 225 (673)
.+....+..+. .+++|+.|+|+.|.+.+.-
T Consensus 263 ~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 263 EEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp TTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred CCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 98754333333 5789999999999998643
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=2.3e-08 Score=94.46 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=53.8
Q ss_pred cccCCCCCCCEEEccCC-CCCCC----CcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccc
Q 005859 107 KEIASLSELSDLYLNVN-NLSGK----IPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASL 181 (673)
Q Consensus 107 ~~~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~ 181 (673)
..+...++|++|+|++| .+... +...+...++|++|+|++|.+...-.. .+...+
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~--------------------~l~~~L 89 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAF--------------------ALAEML 89 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHH--------------------HHHHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHH--------------------HHHHHH
Confidence 34455566666666666 55421 223334445555555555555421110 112223
Q ss_pred cCCCcccccccccccCCCC----CcccccCCCCCCEEEc--cCCCCCcCC
Q 005859 182 GDLGMLMRLDLSFNNLFGP----VPVKLANVPKLEVLDI--RNNSFSGNV 225 (673)
Q Consensus 182 ~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l--~~N~l~g~~ 225 (673)
...++|+.|+|++|.|... +...+...++|+.|+| ++|.|...-
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g 139 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 139 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHH
Confidence 3334555566666655432 3445666788999999 889998643
No 414
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.34 E-value=2.1e-06 Score=87.90 Aligned_cols=137 Identities=18% Similarity=0.126 Sum_probs=89.0
Q ss_pred ccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCC---CceeEeeEEecCCCCeEEEEEeec
Q 005859 407 ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHE---NLASLRGICCSKGRGECFLIYDFV 483 (673)
Q Consensus 407 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~~lv~E~~ 483 (673)
.+.++.|....||+. |..+++|+... ......+.+|.++|+.+.+. .+.+++.+.. ...+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~-~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK-RSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE-CTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc-cCCCceEEEEecc
Confidence 345788888899987 56688887532 12345788999999999652 2456666653 2235678999999
Q ss_pred CCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 005859 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG---------------------------------------- 523 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~---------------------------------------- 523 (673)
+|..+.+..- ..++...+..++.++++.|+.||+
T Consensus 96 ~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 96 QGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9987765211 012333333344444444444332
Q ss_pred ------------------CCCCcccCCcCCCCeEecC---CCC-eeeccccccccc
Q 005859 524 ------------------KRPGLVHPNLSAEKVLIHR---RYN-PLLSDSGLHKLL 557 (673)
Q Consensus 524 ------------------~~~~ivHrDlk~~NILl~~---~~~-~kl~DfGla~~~ 557 (673)
..+.++|+|+++.||+++. ++. ..|.||+.+..-
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235799999999999987 455 479999987653
No 415
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.23 E-value=3.2e-06 Score=88.63 Aligned_cols=147 Identities=14% Similarity=0.111 Sum_probs=90.2
Q ss_pred CccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCC--ceeEeeEEecCCCCeEEEEEe
Q 005859 404 FSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN--LASLRGICCSKGRGECFLIYD 481 (673)
Q Consensus 404 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~~~lv~E 481 (673)
....+.++.|....+|+... +++.+++|..... ..+.+|+.+++.+.... +.++++++.... +..++|||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-g~~~lv~e 114 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-SLTYCISR 114 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-SCEEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-CCeEEEEE
Confidence 34456788899999999876 5788889977432 25889999999886433 456666654432 56799999
Q ss_pred ecCCCChhhh------------------hccccCCc-------------cccCHHHHH---------------------H
Q 005859 482 FVPNGNLLQH------------------LDLEAGSE-------------KVLEWATRI---------------------S 509 (673)
Q Consensus 482 ~~~~gsL~~~------------------l~~~~~~~-------------~~l~~~~~~---------------------~ 509 (673)
|++|..+.+. |+...... ..-+|.... .
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9998655421 11100000 001111110 1
Q ss_pred HHHHHHHHHHHHhc--CCCCcccCCcCCCCeEecCCCCeeecccccccccc
Q 005859 510 VIKGIAKGISYLHG--KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 558 (673)
Q Consensus 510 i~~~ia~gL~yLH~--~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~ 558 (673)
....+..-++++.. ..+.++|+|+.+.||+++++..+.|.||+.+..-.
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 11111112222222 12468999999999999877778899999886543
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.22 E-value=5.3e-06 Score=83.10 Aligned_cols=134 Identities=12% Similarity=0.101 Sum_probs=90.5
Q ss_pred ccccCCcc-eEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CCCceeEeeEEecCCCCeEEEEEeecCC
Q 005859 409 LLGKSSFS-ATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HENLASLRGICCSKGRGECFLIYDFVPN 485 (673)
Q Consensus 409 ~lg~G~~g-~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~lv~E~~~~ 485 (673)
.+..|..+ .||+..... +..+.+|+-... ...++.+|.++|+.+. +--+.++++++.+. +..++|||+++|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--DDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--TEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--CeEEEEEEeeCC
Confidence 34556555 689887654 667888976532 3456888999998884 33466778777544 678999999999
Q ss_pred CChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 005859 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK----------------------------------------- 524 (673)
Q Consensus 486 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------- 524 (673)
.++.+..... ......++.+++..|+-||..
T Consensus 105 ~~~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 105 KTAFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp EEHHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred ccccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 8776654211 112223445555555555532
Q ss_pred ---------------CCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 525 ---------------RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 525 ---------------~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
.+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11378999999999999877677999998753
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.15 E-value=4.3e-06 Score=87.54 Aligned_cols=84 Identities=11% Similarity=0.019 Sum_probs=55.6
Q ss_pred cccc-ccCCcceEEEEEEc-------CCcEEEEEEecccCC--CCcHHHHHHHHHHHhccC-C--CCceeEeeEEecCC-
Q 005859 407 ANLL-GKSSFSATYKGILR-------DGSVVAVKCIAKTSC--KSDEGEFLKGLKILTSLK-H--ENLASLRGICCSKG- 472 (673)
Q Consensus 407 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~~- 472 (673)
.+.| +.|....+|+.... +++.+++|....... ......+.+|+++++.+. + ..+.++++++.+.+
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78888999998764 266788887654320 001245778888888884 3 35667777764321
Q ss_pred CCeEEEEEeecCCCChhh
Q 005859 473 RGECFLIYDFVPNGNLLQ 490 (673)
Q Consensus 473 ~~~~~lv~E~~~~gsL~~ 490 (673)
.+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 134689999999877653
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.90 E-value=3.1e-05 Score=80.21 Aligned_cols=143 Identities=17% Similarity=0.208 Sum_probs=79.5
Q ss_pred cccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCC--CCceeEeeE----EecCCCCeEEEEEe
Q 005859 408 NLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH--ENLASLRGI----CCSKGRGECFLIYD 481 (673)
Q Consensus 408 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~----~~~~~~~~~~lv~E 481 (673)
+.|+.|..+.||+....+| .+++|+.... ...+..|.++++.+.. -.+.+++.. ......+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4566677889999987655 4888988642 2344455666655531 123333321 00011356789999
Q ss_pred ecCCCChh--------------hhhccccC----C------ccccCHHHH------------------------------
Q 005859 482 FVPNGNLL--------------QHLDLEAG----S------EKVLEWATR------------------------------ 507 (673)
Q Consensus 482 ~~~~gsL~--------------~~l~~~~~----~------~~~l~~~~~------------------------------ 507 (673)
|++|..+. ..+|.... . ...-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 11121100 0 011233221
Q ss_pred -HHHHHHHHHHHHHHhc-----------CCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 508 -ISVIKGIAKGISYLHG-----------KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 508 -~~i~~~ia~gL~yLH~-----------~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
..+..++..++++|+. ..+.++|+|+++.||+++.++.+.|.||+.+..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111224456667763 234799999999999998888899999997753
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.84 E-value=5.3e-05 Score=80.43 Aligned_cols=76 Identities=4% Similarity=-0.070 Sum_probs=49.5
Q ss_pred ccccccCCcceEEEEEEc-CCcEEEEEEecccCC------CCcHHHHHHHHHHHhccCC--CC-ceeEeeEEecCCCCeE
Q 005859 407 ANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSC------KSDEGEFLKGLKILTSLKH--EN-LASLRGICCSKGRGEC 476 (673)
Q Consensus 407 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~H--~n-iv~l~~~~~~~~~~~~ 476 (673)
.+.||.|.++.||++... +++.|+||....... ......+..|.++++.+.. |. +.+++.+. . +..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~--~~~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--T--EMA 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--T--TTT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--C--Ccc
Confidence 457999999999999764 468899998654211 1123467789999888742 33 44555432 2 335
Q ss_pred EEEEeecCCC
Q 005859 477 FLIYDFVPNG 486 (673)
Q Consensus 477 ~lv~E~~~~g 486 (673)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 7999999764
No 420
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.65 E-value=9.4e-05 Score=78.42 Aligned_cols=109 Identities=12% Similarity=0.131 Sum_probs=53.2
Q ss_pred cccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCc
Q 005859 107 KEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGM 186 (673)
Q Consensus 107 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 186 (673)
..|.++..|+.+.+..+..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..+ ++..-..+|.++.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 34555555555555444322 333445555555555554 2333333345555555555555433 33233344555555
Q ss_pred ccccccccccCCCCCcccccCCCCCCEEEccCC
Q 005859 187 LMRLDLSFNNLFGPVPVKLANVPKLEVLDIRNN 219 (673)
Q Consensus 187 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 219 (673)
|+.+.|..+ ++..-..+|.++.+|+.+++.+|
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 555555433 33333445555555555555554
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00011 Score=74.20 Aligned_cols=79 Identities=19% Similarity=0.163 Sum_probs=56.7
Q ss_pred CCccccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCC---CCceeEeeEEecCCCCeEEEE
Q 005859 403 CFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH---ENLASLRGICCSKGRGECFLI 479 (673)
Q Consensus 403 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~~~~~~lv 479 (673)
.....+.+|.|..+.||+.+..+|+.|.+|+..... ......|..|++.|+.+.- --+.+++++. ..++|
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~------~~~lv 88 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLA 88 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEecc------CceEE
Confidence 344566789999999999999999999999765443 2334568899999988842 2344555432 23789
Q ss_pred EeecCCCCh
Q 005859 480 YDFVPNGNL 488 (673)
Q Consensus 480 ~E~~~~gsL 488 (673)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987654
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.64 E-value=6.6e-05 Score=80.38 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=49.4
Q ss_pred CCCcccCCcCCCCeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCC---CCCcchhHHHHHHHHHHH
Q 005859 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG---RFTEKSDIYAFGMIVFQI 601 (673)
Q Consensus 525 ~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDVwSfGvvl~el 601 (673)
.+.++|+|+++.||+++.++ ++|.||+.+..-.........-..-...|.+|+..... .-....++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 34799999999999998876 99999998875432211110000011235666554311 122345667888888888
Q ss_pred HhCC
Q 005859 602 LSGK 605 (673)
Q Consensus 602 ~tG~ 605 (673)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 423
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.56 E-value=0.0004 Score=70.82 Aligned_cols=139 Identities=19% Similarity=0.201 Sum_probs=90.6
Q ss_pred cccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccC---CCCceeEeeEEecCCCCeEEEEEee
Q 005859 406 EANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK---HENLASLRGICCSKGRGECFLIYDF 482 (673)
Q Consensus 406 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~~~lv~E~ 482 (673)
..+.|+.|....+|+... +++.+++|+.... ....+..|.+.|+.+. ...+.+++++... .+..++||||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~--~g~~~lvme~ 112 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNS--QGHSFLLLEA 112 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC--SSEEEEEEEC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec--CCceEEEEEe
Confidence 345789999999999886 4667888976542 3567889999998883 3567788877644 3678999999
Q ss_pred cCCCChhh-----------hhccccC-C-----------------ccccCHHHHH---HHHH----------------HH
Q 005859 483 VPNGNLLQ-----------HLDLEAG-S-----------------EKVLEWATRI---SVIK----------------GI 514 (673)
Q Consensus 483 ~~~gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------~i 514 (673)
+++..+.. .||.... . ...-+|.... ++.. .+
T Consensus 113 l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l 192 (312)
T 3jr1_A 113 LNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLI 192 (312)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHH
T ss_pred ccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 99876521 1222111 0 0012565321 1111 11
Q ss_pred HHH-HHHH--hcCCCCcccCCcCCCCeEecCCCCeeecccc
Q 005859 515 AKG-ISYL--HGKRPGLVHPNLSAEKVLIHRRYNPLLSDSG 552 (673)
Q Consensus 515 a~g-L~yL--H~~~~~ivHrDlk~~NILl~~~~~~kl~DfG 552 (673)
... ...| |...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 193 ~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 193 VQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 2234 33456899999999999999887 8899974
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.50 E-value=0.00029 Score=74.14 Aligned_cols=131 Identities=12% Similarity=0.076 Sum_probs=82.5
Q ss_pred cccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCcccc
Q 005859 84 AVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163 (673)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 163 (673)
.+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 4555666666666544 33344456667777777777665 44344556777777777777543 443444567777777
Q ss_pred CeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccC
Q 005859 164 SVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRN 218 (673)
Q Consensus 164 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 218 (673)
+.+.+.++.++..-...|.++.+|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 77777777776555556777777777777644 4433445677777777666543
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.46 E-value=3.1e-05 Score=71.41 Aligned_cols=33 Identities=6% Similarity=0.128 Sum_probs=13.9
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCcEeeccCc
Q 005859 115 LSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYN 147 (673)
Q Consensus 115 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 147 (673)
|++|||+++.++..--..+.++++|+.|+|++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 444444444433222223344444555555444
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.44 E-value=3.8e-05 Score=70.84 Aligned_cols=84 Identities=10% Similarity=0.082 Sum_probs=48.6
Q ss_pred CCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCC-CCCCCcccccCC----CCCcEeeccCcc-ccccCchhhcCccc
Q 005859 89 KSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN-LSGKIPSQIGNM----TNLQVLQLCYNK-LTGNIPTQLGSLRK 162 (673)
Q Consensus 89 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~ 162 (673)
-.|+.|||+++.++..--..+.++++|++|+|+++. ++..--..+..+ ++|+.|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666653333445677777777777764 543222334443 357777777764 55332334556666
Q ss_pred cCeecccccc
Q 005859 163 LSVLALQYNQ 172 (673)
Q Consensus 163 L~~L~l~~N~ 172 (673)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777766654
No 427
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.44 E-value=0.0004 Score=73.52 Aligned_cols=128 Identities=13% Similarity=0.071 Sum_probs=81.5
Q ss_pred cccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCcccc
Q 005859 84 AVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163 (673)
Q Consensus 84 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 163 (673)
.+.++..|+.+.+..+... .....|..+..|+.+.+..+.+ ....|..+.+|+.+.+..+ ++..-..+|.++++|
T Consensus 248 ~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L 322 (394)
T 4fs7_A 248 VFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSL 322 (394)
T ss_dssp TTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred cccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCC
Confidence 4555666666666555432 3444566666666666655432 2345667777777777654 554445677778888
Q ss_pred CeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCCCCCEEEccC
Q 005859 164 SVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVPKLEVLDIRN 218 (673)
Q Consensus 164 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 218 (673)
+.++|.++ ++..-..+|.++.+|+.+.+..| ++..-..+|.++++|+.+++..
T Consensus 323 ~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 323 VSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred CEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 88887644 55444557778888888888766 5544456777888888877654
No 428
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.38 E-value=0.00053 Score=72.05 Aligned_cols=125 Identities=13% Similarity=0.047 Sum_probs=98.9
Q ss_pred cCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCccccccCchhhcCc
Q 005859 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSL 160 (673)
Q Consensus 81 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 160 (673)
-...+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|.++++|+.+.+.+|.++..-...|.++
T Consensus 232 ~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c 309 (379)
T 4h09_A 232 GDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDC 309 (379)
T ss_dssp CTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTC
T ss_pred ccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCC
Confidence 3456788999999999876 66566678899999999999765 554556679999999999999999986667899999
Q ss_pred cccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCC
Q 005859 161 RKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVP 209 (673)
Q Consensus 161 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 209 (673)
.+|+.+.|..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.++.
T Consensus 310 ~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 310 VKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 99999999765 66455568999999999998755 4433345666554
No 429
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.29 E-value=0.00036 Score=73.89 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=40.0
Q ss_pred ccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccCc
Q 005859 83 AAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYN 147 (673)
Q Consensus 83 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 147 (673)
.+|.++++|+.+.|..+ ++..-...|.++++|+.++|.+| ++..-...|.++++|+.+.+..+
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~ 127 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM 127 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc
Confidence 45677777777777643 55455566777777777777654 44344456667777776665543
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.17 E-value=0.00083 Score=71.05 Aligned_cols=87 Identities=10% Similarity=0.083 Sum_probs=53.6
Q ss_pred cccccCCCCCcEeeccCccccccCchhhcCccccCeecccccccCccCCccccCCCcccccccccccCCCCCcccccCCC
Q 005859 130 PSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPASLGDLGMLMRLDLSFNNLFGPVPVKLANVP 209 (673)
Q Consensus 130 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 209 (673)
..+|.++++|+.+.+..+..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..+ ++..-..+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 445667777777777655443 444566677777777775 3444344446777777777777654 4433445677777
Q ss_pred CCCEEEccCC
Q 005859 210 KLEVLDIRNN 219 (673)
Q Consensus 210 ~L~~L~l~~N 219 (673)
+|+.+.+..+
T Consensus 335 ~L~~i~ip~s 344 (394)
T 4gt6_A 335 QLERIAIPSS 344 (394)
T ss_dssp TCCEEEECTT
T ss_pred CCCEEEECcc
Confidence 7777777543
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.15 E-value=0.0011 Score=67.98 Aligned_cols=161 Identities=13% Similarity=0.099 Sum_probs=87.3
Q ss_pred cCHHHHHHHhcCCcc-----ccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCC--ceeE
Q 005859 392 FNLEEVERATQCFSE-----ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN--LASL 464 (673)
Q Consensus 392 ~~~~~l~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l 464 (673)
++.+++...-..|.. .+.|+.|....+|+....+| .+++|...... ....+..|++++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 445566555555543 34466788889999987666 57789876521 2235667888777764222 2333
Q ss_pred eeEE----ecCCCCeEEEEEeecCCCChhh--------------hhcccc-C---C----ccccCHHHHHH---------
Q 005859 465 RGIC----CSKGRGECFLIYDFVPNGNLLQ--------------HLDLEA-G---S----EKVLEWATRIS--------- 509 (673)
Q Consensus 465 ~~~~----~~~~~~~~~lv~E~~~~gsL~~--------------~l~~~~-~---~----~~~l~~~~~~~--------- 509 (673)
+... .....+..+++|||++|..+.. .+|... . . .....|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 3210 0001245689999998865421 011110 0 0 01112332111
Q ss_pred ---HHHHHHHHHHHHhc-----CCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 510 ---VIKGIAKGISYLHG-----KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 510 ---i~~~ia~gL~yLH~-----~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
+...+...+++++. ..++++|+|+.+.|||++++..+.|.||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 01123445555542 123699999999999999876568999987753
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.99 E-value=0.0018 Score=65.62 Aligned_cols=71 Identities=1% Similarity=-0.053 Sum_probs=42.8
Q ss_pred ccccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCc-eeEeeEEecCCCCeEEEEEeec-C
Q 005859 407 ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENL-ASLRGICCSKGRGECFLIYDFV-P 484 (673)
Q Consensus 407 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~~lv~E~~-~ 484 (673)
.+.|+.|....+|+. +.+++|+....... .....+|+++++.+....+ .+++++. . +.-++|+||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~~--~--~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHVD--P--ATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEEC--T--TTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEEE--C--CCCEEEEeecCC
Confidence 467888999999998 45888877653211 1123467777777642222 4555543 2 2246899999 5
Q ss_pred CCCh
Q 005859 485 NGNL 488 (673)
Q Consensus 485 ~gsL 488 (673)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5444
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.98 E-value=0.00015 Score=68.04 Aligned_cols=19 Identities=16% Similarity=0.111 Sum_probs=12.4
Q ss_pred cccCCCCCCEEEccCCCCC
Q 005859 204 KLANVPKLEVLDIRNNSFS 222 (673)
Q Consensus 204 ~~~~l~~L~~L~l~~N~l~ 222 (673)
.+..-+.|+.|+++.|.+.
T Consensus 152 aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 152 AIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHCSSCCEEECCCCCHH
T ss_pred HHHhCCCcCeEeccCCCcc
Confidence 3444567888888776643
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.96 E-value=0.0024 Score=65.68 Aligned_cols=33 Identities=21% Similarity=0.056 Sum_probs=27.8
Q ss_pred CCcccCCcCCCCeEecCC----CCeeecccccccccc
Q 005859 526 PGLVHPNLSAEKVLIHRR----YNPLLSDSGLHKLLA 558 (673)
Q Consensus 526 ~~ivHrDlk~~NILl~~~----~~~kl~DfGla~~~~ 558 (673)
+.++|+|+.+.||+++.+ ..+.|.||+.+..-.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 479999999999999875 678999999886543
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.93 E-value=0.0059 Score=62.46 Aligned_cols=143 Identities=12% Similarity=0.095 Sum_probs=81.0
Q ss_pred cccccCCcceEEEEEEcCCcEEEEEEecccCCCCcHHHHHHHHHHHhccCCC--CceeEeeEEec----CCCCeEEEEEe
Q 005859 408 NLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHE--NLASLRGICCS----KGRGECFLIYD 481 (673)
Q Consensus 408 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~----~~~~~~~lv~E 481 (673)
..++ |....||+....+|+.+++|...... .....+..|..+++.+... .+++++.. .. ...+..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~-~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAF-NGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCB-TTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeec-CCcEEEEECCEEEEEEE
Confidence 3466 77789999887778789999886432 2345677788888877422 23444432 00 01245678999
Q ss_pred ecCCCChhh-----h---------hccccC-----CccccCHHHH----------------------HHHHHHHHHHHHH
Q 005859 482 FVPNGNLLQ-----H---------LDLEAG-----SEKVLEWATR----------------------ISVIKGIAKGISY 520 (673)
Q Consensus 482 ~~~~gsL~~-----~---------l~~~~~-----~~~~l~~~~~----------------------~~i~~~ia~gL~y 520 (673)
|++|..+.. + +|.... ....+++... ...+.+++..++-
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 998754321 0 111000 0112222211 0111122222221
Q ss_pred Hhc--CCCCcccCCcCCCCeEecCCCCeeecccccccc
Q 005859 521 LHG--KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556 (673)
Q Consensus 521 LH~--~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~ 556 (673)
+-. ..+.++|+|+++.||+++ + .+.|.||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 111 233589999999999999 4 889999988754
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.86 E-value=0.00018 Score=67.59 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=43.9
Q ss_pred ccCCCCCCeEeCcCC-cCCc----cCCcccCCCCCCCEEEccCCCCCC----CCcccccCCCCCcEeeccCcccccc---
Q 005859 85 VGGLKSLTGLYLHFN-ALNG----VIPKEIASLSELSDLYLNVNNLSG----KIPSQIGNMTNLQVLQLCYNKLTGN--- 152 (673)
Q Consensus 85 ~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~--- 152 (673)
+.+-+.|+.|+|++| .|.. .+-+.+..-+.|+.|+|++|.|.. .+-..+..-+.|+.|+|++|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 334456677777664 5541 123334445566666666666652 1222333345566666666666521
Q ss_pred -CchhhcCccccCeeccccc
Q 005859 153 -IPTQLGSLRKLSVLALQYN 171 (673)
Q Consensus 153 -~p~~l~~l~~L~~L~l~~N 171 (673)
+-..+..-+.|++|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 1223334445666666543
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.73 E-value=0.0064 Score=57.41 Aligned_cols=99 Identities=16% Similarity=0.129 Sum_probs=64.1
Q ss_pred CChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCCCeEecCCCCeeeccccccccccCcchhhh
Q 005859 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSM 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 565 (673)
-+|.++|... +.++++++++.++.|.+++|.-+-..+ .-..+=+.|..|++..+|.+...+ ..+.
T Consensus 33 vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRR-QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhcc-cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 3788888743 457999999999999999987762111 011223346899999999887764 1110
Q ss_pred hccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHh
Q 005859 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603 (673)
Q Consensus 566 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~t 603 (673)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0122356888764 345788899999999998875
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.70 E-value=0.0027 Score=55.52 Aligned_cols=35 Identities=26% Similarity=0.338 Sum_probs=15.3
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCcEeeccCccc
Q 005859 115 LSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKL 149 (673)
Q Consensus 115 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 149 (673)
|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433333344444444444444444
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.56 E-value=0.0032 Score=55.07 Aligned_cols=56 Identities=25% Similarity=0.307 Sum_probs=47.1
Q ss_pred EEEecCCCcc-cccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCCCCC
Q 005859 69 NISLQGKGLS-GEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLS 126 (673)
Q Consensus 69 ~l~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 126 (673)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6777888886 46775442 47999999999999888888999999999999999875
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.52 E-value=0.0055 Score=65.44 Aligned_cols=73 Identities=18% Similarity=0.249 Sum_probs=49.7
Q ss_pred ccccccCCcceEEEEEEcC--------CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCc-eeEeeEEecCCCCeEE
Q 005859 407 ANLLGKSSFSATYKGILRD--------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENL-ASLRGICCSKGRGECF 477 (673)
Q Consensus 407 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~~ 477 (673)
.+.|+.|....||+....+ ++.+++|+.... .....+.+|..+++.+...++ .++++.+ . + .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~--~--~--g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIF--S--G--G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEE--T--T--E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEe--C--C--C
Confidence 3467888888999998753 478899987432 122466789999988843333 5677665 2 2 3
Q ss_pred EEEeecCCCCh
Q 005859 478 LIYDFVPNGNL 488 (673)
Q Consensus 478 lv~E~~~~gsL 488 (673)
+||||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999986444
No 441
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.35 E-value=0.0094 Score=62.30 Aligned_cols=141 Identities=12% Similarity=0.092 Sum_probs=82.0
Q ss_pred cccccCCcceEEEEEEcC--------CcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CCCceeEeeEEecCCCCeEEE
Q 005859 408 NLLGKSSFSATYKGILRD--------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 408 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~l 478 (673)
+.|..|-...+|+....+ ++.+++|+.... ......+.+|.++++.+. +.-..++++++ . + .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~--~--~--g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVF--P--E--GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE--T--T--EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEc--C--C--cc
Confidence 356667788899998752 478899986332 234556778999998884 32235666665 3 2 28
Q ss_pred EEeecCCCChhhh-----------------hccccC-Ccccc--CHHHHHHHHHHHHH-------------------HHH
Q 005859 479 IYDFVPNGNLLQH-----------------LDLEAG-SEKVL--EWATRISVIKGIAK-------------------GIS 519 (673)
Q Consensus 479 v~E~~~~gsL~~~-----------------l~~~~~-~~~~l--~~~~~~~i~~~ia~-------------------gL~ 519 (673)
||||++|..|..- +|.... -.+.. -|.+..++..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999998555311 111100 01112 24455445444322 223
Q ss_pred HHh----c--CCCCcccCCcCCCCeEecCC----CCeeecccccccc
Q 005859 520 YLH----G--KRPGLVHPNLSAEKVLIHRR----YNPLLSDSGLHKL 556 (673)
Q Consensus 520 yLH----~--~~~~ivHrDlk~~NILl~~~----~~~kl~DfGla~~ 556 (673)
.|. . ....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 332 2 22358999999999999876 6889999998764
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.18 E-value=0.028 Score=60.34 Aligned_cols=73 Identities=11% Similarity=0.007 Sum_probs=47.1
Q ss_pred cccccCCcceEEEEEEcC-CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCCc-eeEeeEEecCCCCeEEEEEeecCC
Q 005859 408 NLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENL-ASLRGICCSKGRGECFLIYDFVPN 485 (673)
Q Consensus 408 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~~lv~E~~~~ 485 (673)
+.|+.|-...+|+....+ +..+++|+..... ...-+..+|..+++.+...++ .++++++ . + ..||||++|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~--~--G~v~e~I~G 185 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFF--T--N--GRIEEFMDG 185 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEE--T--T--EEEEECCCS
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEe--C--C--eEEEEeeCC
Confidence 467788888999998875 5788899875432 111112578888888865445 4677765 2 2 259999987
Q ss_pred CCh
Q 005859 486 GNL 488 (673)
Q Consensus 486 gsL 488 (673)
..|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.05 E-value=0.01 Score=61.95 Aligned_cols=73 Identities=10% Similarity=0.085 Sum_probs=43.3
Q ss_pred cccccCCcceEEEEEEcC---------CcEEEEEEecccCCCCcHHHHHHHHHHHhccCCCC-ceeEeeEEecCCCCeEE
Q 005859 408 NLLGKSSFSATYKGILRD---------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN-LASLRGICCSKGRGECF 477 (673)
Q Consensus 408 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~~~ 477 (673)
..|+.|....+|+....+ ++.+++|+...... ...+...|.++++.+...+ +.++++.. . + +
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~--~ 110 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--G--G 110 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T--E
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec--C--C--c
Confidence 457778888999998754 26788887654321 1112357888888774333 44666543 2 2 6
Q ss_pred EEEeecCCCCh
Q 005859 478 LIYDFVPNGNL 488 (673)
Q Consensus 478 lv~E~~~~gsL 488 (673)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.84 E-value=0.026 Score=58.05 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=27.9
Q ss_pred CCcccCCcCCCCeEecCCCCeeeccccccccc
Q 005859 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 526 ~~ivHrDlk~~NILl~~~~~~kl~DfGla~~~ 557 (673)
..++|+|+.+.||++++++.+.|.||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 36999999999999998888999999887653
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.01 E-value=0.085 Score=55.32 Aligned_cols=142 Identities=13% Similarity=0.100 Sum_probs=80.6
Q ss_pred ccccCCcceEEEEEEcC--------CcEEEEEEecccCCC----------CcH-------HHHHHHHHHHhccC-CCCce
Q 005859 409 LLGKSSFSATYKGILRD--------GSVVAVKCIAKTSCK----------SDE-------GEFLKGLKILTSLK-HENLA 462 (673)
Q Consensus 409 ~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~~~-------~~~~~E~~~l~~l~-H~niv 462 (673)
.|..|-...+|++...+ ++.|.+++.-..... .++ +....|.++++.+. |--..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 46567778899988754 367888877543210 111 12335888888884 33355
Q ss_pred eEeeEEecCCCCeEEEEEeecCCCChhh--h---------------hcccc-CCccccC--HHHHHHHHHHHH-------
Q 005859 463 SLRGICCSKGRGECFLIYDFVPNGNLLQ--H---------------LDLEA-GSEKVLE--WATRISVIKGIA------- 515 (673)
Q Consensus 463 ~l~~~~~~~~~~~~~lv~E~~~~gsL~~--~---------------l~~~~-~~~~~l~--~~~~~~i~~~ia------- 515 (673)
++++++ . + .+|+||++|-+|.. + +|... .-.+... |....++..++.
T Consensus 139 kl~~~~--~--~--G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 139 KLYGIF--P--Q--GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp CEEEEE--T--T--EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred eEEEEe--C--C--CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 777765 3 2 28999999755421 1 11110 0011122 334333433321
Q ss_pred ---------------HHH----HHHhc--CCCCcccCCcCCCCeEecCC------CCeeecccccccc
Q 005859 516 ---------------KGI----SYLHG--KRPGLVHPNLSAEKVLIHRR------YNPLLSDSGLHKL 556 (673)
Q Consensus 516 ---------------~gL----~yLH~--~~~~ivHrDlk~~NILl~~~------~~~kl~DfGla~~ 556 (673)
.-+ ++|.. ....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 22322 22358999999999999887 7899999988754
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.83 E-value=0.11 Score=35.25 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=16.6
Q ss_pred ceehhHHHHHHHHHHHHHHhhhHhhhhcc
Q 005859 304 GVFVGVIAVFIILTVTGLFTFTWYRRRKQ 332 (673)
Q Consensus 304 ~~iv~vi~~~i~l~~~~l~~~~~~rr~~~ 332 (673)
+++.|+++++++++++++..++++|||++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 45566666565555555555555555543
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.25 E-value=0.22 Score=52.70 Aligned_cols=73 Identities=8% Similarity=-0.018 Sum_probs=47.0
Q ss_pred cccccCCcceEEEEEEcC--------CcEEEEEEecccCCCCcHHHHHHHHHHHhccC-CCCceeEeeEEecCCCCeEEE
Q 005859 408 NLLGKSSFSATYKGILRD--------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK-HENLASLRGICCSKGRGECFL 478 (673)
Q Consensus 408 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~l 478 (673)
+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+. +.-..++++.+ . + +.
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~--~~ 147 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF--P--E--GR 147 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--T--EE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--C--CE
Confidence 456677788999998763 5788898865432 11112357888888774 32244666543 2 2 68
Q ss_pred EEeecCCCCh
Q 005859 479 IYDFVPNGNL 488 (673)
Q Consensus 479 v~E~~~~gsL 488 (673)
||||++|..|
T Consensus 148 I~efI~G~~l 157 (424)
T 3mes_A 148 IEEFIDGEPL 157 (424)
T ss_dssp EEECCCSEEC
T ss_pred EEEEeCCccC
Confidence 9999998654
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=92.82 E-value=0.14 Score=34.48 Aligned_cols=21 Identities=29% Similarity=0.463 Sum_probs=11.3
Q ss_pred HHHHHHHHHHhhhHhhhhccc
Q 005859 313 FIILTVTGLFTFTWYRRRKQK 333 (673)
Q Consensus 313 ~i~l~~~~l~~~~~~rr~~~~ 333 (673)
+++++++++..++|.|||+++
T Consensus 21 vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 21 ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHhheehhhhh
Confidence 444445555555666666543
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=91.67 E-value=0.16 Score=34.33 Aligned_cols=29 Identities=31% Similarity=0.449 Sum_probs=16.2
Q ss_pred ceehhHHHHHHHHHHHHHHhhhHhhhhcc
Q 005859 304 GVFVGVIAVFIILTVTGLFTFTWYRRRKQ 332 (673)
Q Consensus 304 ~~iv~vi~~~i~l~~~~l~~~~~~rr~~~ 332 (673)
+++.|+++++++++++++..++++|||++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 45556666555555555555555555543
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.19 E-value=1.1 Score=46.92 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=24.9
Q ss_pred cccCCcCCCCeEe------cCCCCeeeccccccccc
Q 005859 528 LVHPNLSAEKVLI------HRRYNPLLSDSGLHKLL 557 (673)
Q Consensus 528 ivHrDlk~~NILl------~~~~~~kl~DfGla~~~ 557 (673)
++|+|+.+.|||+ +++..+++.||-.|..-
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n 281 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence 5699999999999 44567899999988643
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.31 E-value=4.6 Score=37.90 Aligned_cols=119 Identities=13% Similarity=0.159 Sum_probs=78.7
Q ss_pred CCCCceeEeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHHHHhcCCCCcccCCcCCC
Q 005859 457 KHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAE 536 (673)
Q Consensus 457 ~H~niv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ivHrDlk~~ 536 (673)
.||+.+.. .+- .+.+...+.|+.-+ +...+-. -+.++...+++++.+|+.-.++++.. +|--+.|+
T Consensus 43 ~~~~Fl~~-~I~--e~eD~v~~~y~~~~--~~~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~~r----~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELT--ELRDSFQIHYDIND--NHTPFDN-----IKSFTKNEKLRYLLNIKNLEEVNRTR----YTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEE--ECSSEEEEEECCCT--TSEEGGG-----GGGSCHHHHHHHHHHGGGGGGGGGSS----EECCCSGG
T ss_pred cCCcccce-EEE--EcccEEEEEEEcCc--ccCCHHH-----HHhcCHHHHHHHHHHHHHHHHHhcCc----eEEEEecc
Confidence 68888755 233 22355555555443 2222221 13478889999999999888777643 78889999
Q ss_pred CeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhh
Q 005859 537 KVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612 (673)
Q Consensus 537 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~ 612 (673)
||+++.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|....
T Consensus 109 NL~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~ 161 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALV 161 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred eEEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 999999999999988864322 222 11222224467778888999998876543
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.58 E-value=0.097 Score=56.20 Aligned_cols=60 Identities=3% Similarity=0.035 Sum_probs=16.9
Q ss_pred ccccccCCcceEEEEEEcC-CcEEEE------EEecccCCC-CcHHHHHHHHHHHhccCCCCceeEeeEEe
Q 005859 407 ANLLGKSSFSATYKGILRD-GSVVAV------KCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICC 469 (673)
Q Consensus 407 ~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 469 (673)
.+.|| ||.||+|.+.. ...||| |..+..... .....|.+|..+++.++|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 34565 99999999864 467888 766543322 22356889999999999999999988764
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.62 E-value=3.5 Score=38.80 Aligned_cols=118 Identities=11% Similarity=0.168 Sum_probs=77.3
Q ss_pred CCCCceeEeeEEecCCCCeEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHHHHHHH-HHhcCCCCcccCCcCC
Q 005859 457 KHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGIS-YLHGKRPGLVHPNLSA 535 (673)
Q Consensus 457 ~H~niv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~ivHrDlk~ 535 (673)
.||+. . ..+- .+.+...+.|+.-+++.=...+ +.++...+++++.+|+.-.. +++. -+|--+.|
T Consensus 48 ~~~~f-~-~~I~--~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI-V-RDID--VSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCP 112 (219)
T ss_dssp SCSSS-E-EEEE--ECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCG
T ss_pred cCCCC-C-eEEE--EeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeC
Confidence 67877 2 2222 3346666666655443322333 24778899999999988877 6664 47888999
Q ss_pred CCeEecCCCCeeeccccccccccCcchhhhhccCCCCCccCCccccCCCCCcchhHHHHHHHHHHHHhCCCCCChhh
Q 005859 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612 (673)
Q Consensus 536 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGvvl~el~tG~~p~~~~~ 612 (673)
+||++|.++.++|.-.|+-.. ++|.- .++.-=.-.+=+++..++.++..|....
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~l~ 166 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDEYL 166 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHHHH
T ss_pred ceEEEeCCCcEEEEEcCCccc------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 999999999999998886432 23321 1222223466777888888887776543
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=67.91 E-value=5 Score=26.14 Aligned_cols=27 Identities=22% Similarity=0.066 Sum_probs=11.2
Q ss_pred cceehhHHHHHH-HHHHHHHHhhhHhhh
Q 005859 303 TGVFVGVIAVFI-ILTVTGLFTFTWYRR 329 (673)
Q Consensus 303 ~~~iv~vi~~~i-~l~~~~l~~~~~~rr 329 (673)
.+.+.|++++.+ .+.+++.+.++++||
T Consensus 10 ~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 444455444333 233333444444443
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=63.79 E-value=3.8 Score=27.12 Aligned_cols=12 Identities=33% Similarity=0.476 Sum_probs=5.0
Q ss_pred eehhHHHHHHHH
Q 005859 305 VFVGVIAVFIIL 316 (673)
Q Consensus 305 ~iv~vi~~~i~l 316 (673)
++++++++++++
T Consensus 15 I~~~vv~Gv~ll 26 (41)
T 2k9y_A 15 VIGGVAVGVVLL 26 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEeehhHHHHHH
Confidence 344444444433
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=60.12 E-value=3.3 Score=26.32 Aligned_cols=25 Identities=12% Similarity=0.292 Sum_probs=11.2
Q ss_pred eehhHHHHHHHHHHHHHHhhhHhhhh
Q 005859 305 VFVGVIAVFIILTVTGLFTFTWYRRR 330 (673)
Q Consensus 305 ~iv~vi~~~i~l~~~~l~~~~~~rr~ 330 (673)
+++++++ +++++++++.+.++.|||
T Consensus 10 IaagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHH-HHHHHHHHHHhheEEeec
Confidence 3444444 333444444444455544
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.94 E-value=83 Score=25.16 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=17.5
Q ss_pred cccCCCCCCCEEEccCCCCCCCCcccccCCCCCcEeeccC
Q 005859 107 KEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCY 146 (673)
Q Consensus 107 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 146 (673)
..|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455555544443 2223334455555555555443
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=33.17 E-value=3.3e+02 Score=27.17 Aligned_cols=77 Identities=13% Similarity=0.153 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCChhhhhccccCCccccCHHHHHHHHHHH--HHHHHHHhcC--CCCccc-CCcCCCCeEecCCCC-eee
Q 005859 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGI--AKGISYLHGK--RPGLVH-PNLSAEKVLIHRRYN-PLL 548 (673)
Q Consensus 475 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i--a~gL~yLH~~--~~~ivH-rDlk~~NILl~~~~~-~kl 548 (673)
..+++|||.+|..|.+.-... ....+..+ .+.++ +-++.++..+ +-+.+. .--.+.|||++++.. +.+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~--~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ 229 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS--APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVP 229 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS--HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEE
T ss_pred cceehhhhcCCCccccchhhh--hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEE
Confidence 467999999876665432210 01123222 22232 3455555542 111222 235788999987654 778
Q ss_pred ccccccccc
Q 005859 549 SDSGLHKLL 557 (673)
Q Consensus 549 ~DfGla~~~ 557 (673)
+|-+.+..-
T Consensus 230 IDhn~af~~ 238 (342)
T 1cja_A 230 IDSKIIPLD 238 (342)
T ss_dssp CSCCCCCCC
T ss_pred EcCCccccC
Confidence 899988653
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.04 E-value=93 Score=24.84 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=37.5
Q ss_pred CCCcccccCccccCCCCCCeEeCcCCcCCccCCcccCCCCCCCEEEccCC
Q 005859 74 GKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVN 123 (673)
Q Consensus 74 ~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 123 (673)
+.+++..-..+|.++++|+.+.|..+ ++..-...|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34455455568999999999999875 45455678999999999999764
Done!