Query 005864
Match_columns 673
No_of_seqs 640 out of 5051
Neff 10.1
Searched_HMMs 46136
Date Thu Mar 28 14:52:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005864.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005864hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.1E-81 4.5E-86 737.3 49.8 643 2-673 270-950 (968)
2 KOG1187 Serine/threonine prote 100.0 7.2E-53 1.6E-57 429.6 24.1 280 389-672 62-350 (361)
3 KOG0192 Tyrosine kinase specif 100.0 5.4E-49 1.2E-53 397.4 20.9 255 403-672 42-301 (362)
4 KOG0581 Mitogen-activated prot 100.0 4.5E-49 9.7E-54 376.6 17.2 252 404-669 81-334 (364)
5 KOG0575 Polo-like serine/threo 100.0 2.8E-48 6.2E-53 392.6 20.9 250 402-669 18-268 (592)
6 KOG0615 Serine/threonine prote 100.0 1.2E-48 2.6E-53 375.7 13.9 255 401-669 171-436 (475)
7 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-47 3E-52 384.1 15.7 248 404-672 208-459 (468)
8 KOG0591 NIMA (never in mitosis 100.0 8.4E-48 1.8E-52 351.5 7.8 257 403-670 20-281 (375)
9 KOG0595 Serine/threonine-prote 100.0 4.9E-46 1.1E-50 358.5 18.3 201 401-609 9-216 (429)
10 KOG0598 Ribosomal protein S6 k 100.0 3.2E-46 7E-51 357.0 16.3 245 401-662 24-269 (357)
11 KOG0593 Predicted protein kina 100.0 2.6E-45 5.6E-50 338.7 14.5 261 402-669 2-283 (396)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 5.1E-46 1.1E-50 382.6 10.9 270 385-673 603-890 (996)
13 KOG1026 Nerve growth factor re 100.0 2.2E-45 4.9E-50 386.2 14.6 255 402-672 486-760 (774)
14 KOG0193 Serine/threonine prote 100.0 3E-44 6.5E-49 361.3 16.2 263 393-672 383-651 (678)
15 KOG0592 3-phosphoinositide-dep 100.0 6.3E-44 1.4E-48 354.7 16.9 251 401-669 72-337 (604)
16 KOG0582 Ste20-like serine/thre 100.0 3.5E-43 7.7E-48 341.3 21.1 261 401-669 25-292 (516)
17 KOG0600 Cdc2-related protein k 100.0 1.8E-43 4E-48 348.6 17.0 261 402-669 117-399 (560)
18 KOG0659 Cdk activating kinase 100.0 3E-43 6.4E-48 319.7 16.8 262 402-670 2-281 (318)
19 KOG0578 p21-activated serine/t 100.0 2.2E-43 4.8E-48 354.3 15.9 250 401-669 272-522 (550)
20 KOG0616 cAMP-dependent protein 100.0 1.1E-42 2.3E-47 320.8 18.0 239 402-661 44-283 (355)
21 KOG0661 MAPK related serine/th 100.0 2.4E-43 5.2E-48 345.1 11.9 261 401-670 9-291 (538)
22 KOG0597 Serine-threonine prote 100.0 4.2E-43 9.1E-48 348.8 12.7 248 402-669 2-250 (808)
23 KOG0198 MEKK and related serin 100.0 1E-42 2.2E-47 340.4 15.2 251 402-670 17-276 (313)
24 KOG1095 Protein tyrosine kinas 100.0 3E-42 6.5E-47 376.1 19.8 255 402-672 692-959 (1025)
25 KOG0583 Serine/threonine prote 100.0 6.6E-42 1.4E-46 349.7 21.1 253 400-669 15-274 (370)
26 KOG0194 Protein tyrosine kinas 100.0 1.9E-42 4.1E-47 353.4 14.0 254 402-672 157-418 (474)
27 KOG4721 Serine/threonine prote 100.0 1.1E-42 2.3E-47 345.7 11.8 246 392-672 121-366 (904)
28 KOG1094 Discoidin domain recep 100.0 6.3E-42 1.4E-46 341.6 16.7 260 402-672 538-802 (807)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.4E-42 2E-46 353.5 18.8 257 401-673 6-333 (338)
30 KOG0201 Serine/threonine prote 100.0 1.9E-42 4.1E-47 336.3 11.5 250 401-669 12-262 (467)
31 KOG0580 Serine/threonine prote 100.0 6.1E-42 1.3E-46 306.7 13.0 250 402-669 22-272 (281)
32 KOG0605 NDR and related serine 100.0 1.2E-41 2.7E-46 338.8 15.6 251 401-668 140-443 (550)
33 KOG2345 Serine/threonine prote 100.0 1.2E-41 2.6E-46 306.1 13.9 260 401-672 20-298 (302)
34 cd05571 STKc_PKB Catalytic dom 100.0 5.9E-41 1.3E-45 344.6 20.2 244 408-669 1-250 (323)
35 cd05631 STKc_GRK4 Catalytic do 100.0 5.7E-41 1.2E-45 338.7 19.7 254 403-669 1-260 (285)
36 PHA02988 hypothetical protein; 100.0 6.6E-41 1.4E-45 337.2 20.0 245 407-672 25-277 (283)
37 cd05096 PTKc_DDR1 Catalytic do 100.0 1.4E-40 2.9E-45 339.5 22.4 262 402-673 5-304 (304)
38 cd05612 STKc_PRKX_like Catalyt 100.0 6.3E-41 1.4E-45 339.3 19.2 247 402-669 1-253 (291)
39 KOG0589 Serine/threonine prote 100.0 1.1E-41 2.4E-46 340.8 12.8 253 402-670 4-258 (426)
40 PTZ00263 protein kinase A cata 100.0 1.1E-40 2.5E-45 343.2 19.8 247 402-669 18-270 (329)
41 KOG0588 Serine/threonine prote 100.0 4.5E-41 9.8E-46 341.3 16.3 249 402-669 12-262 (786)
42 KOG0663 Protein kinase PITSLRE 100.0 3.1E-41 6.7E-46 315.9 13.9 261 402-669 76-360 (419)
43 KOG0611 Predicted serine/threo 100.0 1.7E-41 3.6E-46 324.4 11.9 248 402-669 53-302 (668)
44 KOG0033 Ca2+/calmodulin-depend 100.0 1.8E-42 4E-47 310.1 4.6 253 401-669 10-266 (355)
45 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-40 2.9E-45 340.4 19.0 241 410-668 1-245 (312)
46 cd05595 STKc_PKB_beta Catalyti 100.0 2.6E-40 5.7E-45 339.6 21.1 244 408-669 1-250 (323)
47 KOG0694 Serine/threonine prote 100.0 5.7E-41 1.2E-45 343.5 15.3 245 401-664 367-613 (694)
48 cd05593 STKc_PKB_gamma Catalyt 100.0 4E-40 8.6E-45 338.8 21.3 244 408-669 1-250 (328)
49 cd05104 PTKc_Kit Catalytic dom 100.0 3.5E-40 7.5E-45 345.2 20.5 258 401-673 34-373 (375)
50 PTZ00426 cAMP-dependent protei 100.0 3.2E-40 6.9E-45 340.3 19.8 247 402-669 30-283 (340)
51 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.2E-40 4.9E-45 342.2 18.3 256 402-670 1-257 (333)
52 cd05106 PTKc_CSF-1R Catalytic 100.0 3.3E-40 7.2E-45 344.9 19.7 258 401-673 37-371 (374)
53 cd05064 PTKc_EphR_A10 Catalyti 100.0 1E-39 2.2E-44 326.3 20.8 253 402-673 5-264 (266)
54 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-39 2.4E-44 335.5 21.3 247 404-669 1-256 (324)
55 cd05584 STKc_p70S6K Catalytic 100.0 1.2E-39 2.6E-44 334.9 21.1 244 408-669 2-255 (323)
56 cd05594 STKc_PKB_alpha Catalyt 100.0 5.6E-40 1.2E-44 337.8 18.6 244 408-669 1-251 (325)
57 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-39 2.4E-44 328.4 20.2 249 410-669 1-256 (280)
58 cd05588 STKc_aPKC Catalytic do 100.0 1.7E-39 3.6E-44 334.6 21.1 252 408-669 1-261 (329)
59 cd08228 STKc_Nek6 Catalytic do 100.0 2.2E-39 4.8E-44 324.4 21.3 261 402-673 2-264 (267)
60 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-39 2.6E-44 329.6 19.3 260 402-669 5-284 (288)
61 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-39 3.4E-44 333.4 20.2 239 408-664 1-241 (320)
62 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.6E-39 5.6E-44 321.7 21.2 250 402-672 4-256 (256)
63 PF07714 Pkinase_Tyr: Protein 100.0 4.9E-40 1.1E-44 326.8 15.9 248 406-671 3-259 (259)
64 KOG0660 Mitogen-activated prot 100.0 6.6E-40 1.4E-44 312.4 15.9 262 400-669 20-309 (359)
65 cd05592 STKc_nPKC_theta_delta 100.0 2.5E-39 5.4E-44 331.3 21.4 241 408-666 1-243 (316)
66 cd06649 PKc_MEK2 Catalytic dom 100.0 4.4E-39 9.6E-44 331.9 23.2 259 401-670 4-301 (331)
67 cd05587 STKc_cPKC Catalytic do 100.0 2.5E-39 5.4E-44 332.8 21.2 244 403-664 1-246 (324)
68 cd08229 STKc_Nek7 Catalytic do 100.0 2.9E-39 6.4E-44 323.5 21.2 261 402-673 2-264 (267)
69 cd05048 PTKc_Ror Catalytic Dom 100.0 3.3E-39 7.1E-44 326.1 21.7 256 402-673 5-282 (283)
70 KOG0585 Ca2+/calmodulin-depend 100.0 7E-40 1.5E-44 320.4 16.0 253 400-669 95-371 (576)
71 cd05591 STKc_nPKC_epsilon Cata 100.0 1.8E-39 3.8E-44 333.5 19.9 244 408-669 1-253 (321)
72 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-39 2.6E-44 335.4 18.5 247 408-664 1-250 (329)
73 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.5E-40 9.9E-45 342.9 15.5 251 402-669 1-284 (350)
74 KOG0032 Ca2+/calmodulin-depend 100.0 2.4E-39 5.2E-44 330.3 20.3 253 401-669 34-292 (382)
75 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-39 4.1E-44 330.8 19.6 261 401-669 4-287 (303)
76 KOG0574 STE20-like serine/thre 100.0 2.2E-41 4.8E-46 311.7 4.6 248 403-669 34-282 (502)
77 cd05605 STKc_GRK4_like Catalyt 100.0 2.2E-39 4.8E-44 327.1 19.4 254 403-669 1-260 (285)
78 cd05596 STKc_ROCK Catalytic do 100.0 1.5E-39 3.2E-44 339.7 18.6 252 401-669 42-303 (370)
79 KOG1989 ARK protein kinase fam 100.0 1.3E-39 2.8E-44 344.7 18.3 252 402-672 37-309 (738)
80 PLN00034 mitogen-activated pro 100.0 1.8E-39 4E-44 337.9 19.2 247 403-669 75-327 (353)
81 cd05616 STKc_cPKC_beta Catalyt 100.0 3.6E-39 7.9E-44 331.5 21.0 244 403-664 1-246 (323)
82 cd05570 STKc_PKC Catalytic dom 100.0 3.6E-39 7.9E-44 330.5 20.9 244 408-669 1-251 (318)
83 KOG0599 Phosphorylase kinase g 100.0 3E-40 6.5E-45 300.5 11.3 256 399-669 14-282 (411)
84 cd07848 STKc_CDKL5 Catalytic d 100.0 1.9E-39 4.2E-44 328.4 18.6 261 402-669 1-283 (287)
85 cd05072 PTKc_Lyn Catalytic dom 100.0 3.7E-39 8E-44 321.6 20.3 254 401-673 5-260 (261)
86 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-39 3E-44 340.8 18.0 251 402-669 1-295 (364)
87 KOG2052 Activin A type IB rece 100.0 5.9E-39 1.3E-43 311.8 20.9 260 401-672 210-501 (513)
88 cd05628 STKc_NDR1 Catalytic do 100.0 2.9E-39 6.3E-44 337.5 20.3 252 402-669 1-292 (363)
89 cd05049 PTKc_Trk Catalytic dom 100.0 5.9E-39 1.3E-43 323.7 21.8 256 402-673 5-280 (280)
90 KOG0610 Putative serine/threon 100.0 3.8E-39 8.2E-44 310.9 19.3 253 402-668 77-390 (459)
91 KOG0658 Glycogen synthase kina 100.0 1.7E-40 3.7E-45 316.9 9.9 255 403-669 25-305 (364)
92 cd05062 PTKc_IGF-1R Catalytic 100.0 3.7E-39 8E-44 324.5 20.2 258 400-673 4-277 (277)
93 KOG0594 Protein kinase PCTAIRE 100.0 2.4E-39 5.2E-44 310.1 17.7 264 402-670 11-302 (323)
94 cd05626 STKc_LATS2 Catalytic d 100.0 2.6E-39 5.7E-44 340.0 19.5 251 403-669 2-304 (381)
95 cd05619 STKc_nPKC_theta Cataly 100.0 5.5E-39 1.2E-43 328.5 21.3 243 408-668 1-246 (316)
96 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.1E-39 8.8E-44 337.6 20.6 257 401-673 36-396 (400)
97 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.8E-39 8.2E-44 321.5 19.4 256 399-673 3-260 (261)
98 cd05620 STKc_nPKC_delta Cataly 100.0 5.6E-39 1.2E-43 328.7 21.1 243 408-668 1-246 (316)
99 cd05621 STKc_ROCK2 Catalytic d 100.0 2E-39 4.4E-44 338.2 18.0 253 400-669 41-303 (370)
100 cd05068 PTKc_Frk_like Catalyti 100.0 8.5E-39 1.9E-43 318.9 21.6 254 401-673 5-260 (261)
101 cd05575 STKc_SGK Catalytic dom 100.0 2.6E-39 5.7E-44 332.5 18.5 240 408-665 1-242 (323)
102 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.7E-38 3.6E-43 318.1 23.7 261 402-673 2-264 (267)
103 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8.8E-39 1.9E-43 317.6 21.1 251 402-672 4-256 (256)
104 KOG3653 Transforming growth fa 100.0 3.5E-39 7.6E-44 315.7 17.7 258 402-671 210-500 (534)
105 cd05601 STKc_CRIK Catalytic do 100.0 1.4E-39 3E-44 336.0 15.8 252 402-669 1-262 (330)
106 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-39 3E-44 334.0 15.7 240 408-666 2-245 (318)
107 cd05108 PTKc_EGFR Catalytic do 100.0 5.3E-39 1.2E-43 329.5 19.7 250 402-672 7-266 (316)
108 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-38 2.5E-43 318.9 21.3 253 402-673 4-264 (266)
109 cd05629 STKc_NDR_like_fungal C 100.0 2.9E-39 6.2E-44 339.6 17.6 251 402-669 1-304 (377)
110 PRK13184 pknD serine/threonine 100.0 8E-39 1.7E-43 352.3 21.8 259 402-672 2-288 (932)
111 cd07862 STKc_CDK6 Catalytic do 100.0 7.6E-39 1.7E-43 324.6 19.9 261 402-669 1-286 (290)
112 KOG4278 Protein tyrosine kinas 100.0 6.4E-40 1.4E-44 328.7 11.6 252 402-672 267-521 (1157)
113 cd05615 STKc_cPKC_alpha Cataly 100.0 1E-38 2.3E-43 327.7 20.8 244 403-664 1-246 (323)
114 KOG4257 Focal adhesion tyrosin 100.0 3.4E-39 7.4E-44 324.0 16.4 251 403-672 390-647 (974)
115 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-38 2.9E-43 315.7 20.6 248 408-673 1-252 (252)
116 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5E-39 1.1E-43 333.5 18.1 259 403-669 1-289 (338)
117 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-38 4.5E-43 315.3 21.8 252 403-670 1-253 (256)
118 cd05602 STKc_SGK1 Catalytic do 100.0 6.2E-39 1.3E-43 330.1 18.6 244 408-669 1-246 (325)
119 cd05607 STKc_GRK7 Catalytic do 100.0 1.1E-38 2.5E-43 320.5 20.0 249 410-670 1-250 (277)
120 cd05052 PTKc_Abl Catalytic dom 100.0 1.3E-38 2.8E-43 317.9 20.3 253 402-673 6-261 (263)
121 cd06650 PKc_MEK1 Catalytic dom 100.0 2E-38 4.4E-43 326.9 22.3 200 401-609 4-204 (333)
122 cd05603 STKc_SGK2 Catalytic do 100.0 7.8E-39 1.7E-43 328.9 19.0 240 408-665 1-242 (321)
123 cd05604 STKc_SGK3 Catalytic do 100.0 4.9E-39 1.1E-43 330.8 17.5 241 408-666 1-243 (325)
124 PTZ00267 NIMA-related protein 100.0 1.2E-38 2.6E-43 343.5 21.1 250 403-669 68-322 (478)
125 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-38 3.2E-43 327.2 20.8 246 408-664 1-248 (327)
126 cd05614 STKc_MSK2_N N-terminal 100.0 5.2E-39 1.1E-43 332.0 17.5 253 403-669 1-266 (332)
127 cd05622 STKc_ROCK1 Catalytic d 100.0 8.3E-39 1.8E-43 334.0 19.1 259 395-670 36-304 (371)
128 cd05054 PTKc_VEGFR Catalytic d 100.0 7.4E-39 1.6E-43 330.2 18.5 258 401-673 6-332 (337)
129 cd05093 PTKc_TrkB Catalytic do 100.0 2.1E-38 4.6E-43 320.7 21.4 255 401-672 4-277 (288)
130 cd05090 PTKc_Ror1 Catalytic do 100.0 1.7E-38 3.8E-43 320.6 20.4 254 402-673 5-282 (283)
131 cd05625 STKc_LATS1 Catalytic d 100.0 6.8E-39 1.5E-43 337.4 18.1 250 403-669 2-304 (382)
132 cd05598 STKc_LATS Catalytic do 100.0 3.9E-39 8.4E-44 338.7 16.0 252 403-669 2-300 (376)
133 cd05059 PTKc_Tec_like Catalyti 100.0 2E-38 4.3E-43 315.2 20.3 251 402-672 4-256 (256)
134 KOG1025 Epidermal growth facto 100.0 1.2E-39 2.5E-44 337.0 11.1 248 404-672 698-955 (1177)
135 cd06646 STKc_MAP4K5 Catalytic 100.0 3.6E-38 7.9E-43 315.5 21.8 253 402-671 9-266 (267)
136 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.9E-38 4E-43 316.2 19.5 253 401-673 5-259 (260)
137 cd05071 PTKc_Src Catalytic dom 100.0 3.3E-38 7.3E-43 314.6 21.3 252 402-673 6-259 (262)
138 PTZ00283 serine/threonine prot 100.0 1.4E-38 3.1E-43 342.6 19.4 255 400-669 30-296 (496)
139 PHA03212 serine/threonine kina 100.0 4E-38 8.6E-43 330.1 22.0 252 402-669 92-375 (391)
140 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4E-38 8.6E-43 313.9 20.9 252 402-673 6-259 (260)
141 cd05094 PTKc_TrkC Catalytic do 100.0 3.7E-38 8E-43 319.5 20.9 254 402-672 5-280 (291)
142 cd06612 STKc_MST1_2 Catalytic 100.0 5.4E-38 1.2E-42 312.3 21.7 249 402-669 3-252 (256)
143 cd05097 PTKc_DDR_like Catalyti 100.0 5.1E-38 1.1E-42 319.1 21.9 262 402-673 5-295 (295)
144 cd05051 PTKc_DDR Catalytic dom 100.0 6.7E-38 1.5E-42 318.7 22.6 263 401-673 4-296 (296)
145 cd05111 PTK_HER3 Pseudokinase 100.0 6E-38 1.3E-42 315.7 21.9 250 402-672 7-266 (279)
146 cd05095 PTKc_DDR2 Catalytic do 100.0 6.1E-38 1.3E-42 318.7 22.1 262 402-673 5-296 (296)
147 cd05045 PTKc_RET Catalytic dom 100.0 3.9E-38 8.5E-43 319.2 20.4 255 403-673 1-285 (290)
148 cd05632 STKc_GRK5 Catalytic do 100.0 3.8E-38 8.2E-43 318.1 20.1 253 404-669 2-260 (285)
149 cd08219 STKc_Nek3 Catalytic do 100.0 4.8E-38 1E-42 312.4 20.4 251 403-670 1-252 (255)
150 cd05091 PTKc_Ror2 Catalytic do 100.0 4E-38 8.7E-43 318.0 19.7 255 403-673 6-282 (283)
151 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.3E-38 7.3E-43 330.4 19.8 258 399-673 34-398 (401)
152 cd05069 PTKc_Yes Catalytic dom 100.0 9.6E-38 2.1E-42 311.1 21.9 252 402-673 6-259 (260)
153 cd05061 PTKc_InsR Catalytic do 100.0 4.1E-38 8.9E-43 318.6 19.5 258 400-673 4-277 (288)
154 cd06654 STKc_PAK1 Catalytic do 100.0 6.9E-38 1.5E-42 317.9 21.1 249 402-669 20-269 (296)
155 cd05032 PTKc_InsR_like Catalyt 100.0 6.5E-38 1.4E-42 315.6 20.7 256 401-673 5-277 (277)
156 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.7E-38 1E-42 321.5 19.9 260 402-669 6-285 (309)
157 cd05085 PTKc_Fer Catalytic dom 100.0 8.8E-38 1.9E-42 309.5 21.2 247 408-672 1-249 (250)
158 cd05043 PTK_Ryk Pseudokinase d 100.0 6.1E-38 1.3E-42 316.2 20.4 256 401-672 5-274 (280)
159 cd05066 PTKc_EphR_A Catalytic 100.0 6.9E-38 1.5E-42 313.4 20.6 253 402-673 4-265 (267)
160 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.3E-38 1.4E-42 315.4 20.2 256 401-673 5-277 (277)
161 cd05050 PTKc_Musk Catalytic do 100.0 8.7E-38 1.9E-42 316.4 21.3 257 401-673 4-288 (288)
162 cd05055 PTKc_PDGFR Catalytic d 100.0 7.6E-38 1.7E-42 318.4 20.9 257 401-673 34-300 (302)
163 KOG4717 Serine/threonine prote 100.0 2.4E-38 5.3E-43 311.2 16.4 249 402-669 18-269 (864)
164 cd06625 STKc_MEKK3_like Cataly 100.0 1.3E-37 2.9E-42 310.8 22.1 253 402-670 2-260 (263)
165 cd05115 PTKc_Zap-70 Catalytic 100.0 8.6E-38 1.9E-42 310.6 20.6 244 410-673 3-254 (257)
166 cd05089 PTKc_Tie1 Catalytic do 100.0 1E-37 2.2E-42 317.1 21.3 253 402-672 2-273 (297)
167 cd05630 STKc_GRK6 Catalytic do 100.0 5.5E-38 1.2E-42 316.8 19.2 254 403-669 1-260 (285)
168 cd05053 PTKc_FGFR Catalytic do 100.0 5.6E-38 1.2E-42 318.7 19.4 257 400-673 10-290 (293)
169 cd05627 STKc_NDR2 Catalytic do 100.0 1.6E-38 3.5E-43 331.7 15.9 251 402-669 1-292 (360)
170 cd05092 PTKc_TrkA Catalytic do 100.0 6.9E-38 1.5E-42 315.6 19.8 254 402-673 5-280 (280)
171 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.2E-38 2E-42 315.3 20.7 259 404-673 6-280 (283)
172 cd06637 STKc_TNIK Catalytic do 100.0 5E-38 1.1E-42 315.5 18.6 253 399-669 3-268 (272)
173 cd05116 PTKc_Syk Catalytic dom 100.0 9.9E-38 2.1E-42 310.4 20.5 246 409-673 2-254 (257)
174 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.4E-37 3.1E-42 311.4 21.7 253 402-673 5-266 (268)
175 cd08221 STKc_Nek9 Catalytic do 100.0 1.6E-37 3.4E-42 308.9 21.8 253 403-671 1-254 (256)
176 cd05109 PTKc_HER2 Catalytic do 100.0 9.7E-38 2.1E-42 314.5 20.5 252 402-672 7-266 (279)
177 cd05597 STKc_DMPK_like Catalyt 100.0 8.5E-38 1.8E-42 322.1 20.4 254 402-669 1-265 (331)
178 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-37 2.6E-42 317.8 21.2 256 401-673 14-295 (304)
179 cd05075 PTKc_Axl Catalytic dom 100.0 2E-37 4.4E-42 311.1 22.5 254 404-673 1-270 (272)
180 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.2E-37 4.7E-42 312.9 22.9 262 402-673 4-282 (284)
181 PF00069 Pkinase: Protein kina 100.0 1.3E-38 2.8E-43 317.5 13.6 254 404-669 1-256 (260)
182 cd06624 STKc_ASK Catalytic dom 100.0 1.9E-37 4.1E-42 310.5 21.8 256 399-669 5-264 (268)
183 cd05065 PTKc_EphR_B Catalytic 100.0 1E-37 2.2E-42 312.6 19.7 254 402-673 4-267 (269)
184 cd07861 STKc_CDK1_euk Catalyti 100.0 1E-37 2.3E-42 315.5 20.0 262 403-669 1-281 (285)
185 cd06656 STKc_PAK3 Catalytic do 100.0 2E-37 4.3E-42 314.7 22.1 249 402-669 19-268 (297)
186 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.3E-38 1.8E-42 319.4 19.3 256 401-672 17-297 (307)
187 cd05035 PTKc_Axl_like Catalyti 100.0 2.1E-37 4.6E-42 311.1 21.9 254 404-673 1-271 (273)
188 cd05034 PTKc_Src_like Catalyti 100.0 2.2E-37 4.7E-42 308.9 21.7 253 401-673 5-260 (261)
189 cd05040 PTKc_Ack_like Catalyti 100.0 2.3E-37 5.1E-42 307.9 21.8 249 408-673 1-257 (257)
190 KOG0199 ACK and related non-re 100.0 1.8E-38 3.9E-43 322.8 13.8 245 406-670 114-368 (1039)
191 cd05039 PTKc_Csk_like Catalyti 100.0 2E-37 4.3E-42 308.1 21.1 250 401-673 5-255 (256)
192 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.2E-37 4.7E-42 310.2 21.3 253 408-672 1-268 (269)
193 KOG0596 Dual specificity; seri 100.0 2.3E-38 5.1E-43 315.0 13.8 254 400-669 359-626 (677)
194 cd05088 PTKc_Tie2 Catalytic do 100.0 7.5E-38 1.6E-42 318.8 18.0 254 401-672 6-278 (303)
195 cd06644 STKc_STK10_LOK Catalyt 100.0 3.2E-37 7E-42 312.8 22.4 251 402-669 12-268 (292)
196 cd05073 PTKc_Hck Catalytic dom 100.0 2E-37 4.4E-42 308.7 20.3 253 401-673 5-259 (260)
197 cd05586 STKc_Sck1_like Catalyt 100.0 4.3E-38 9.4E-43 324.7 15.9 243 410-669 1-252 (330)
198 cd06640 STKc_MST4 Catalytic do 100.0 5E-37 1.1E-41 308.8 23.3 249 402-670 4-253 (277)
199 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-37 3.2E-42 315.3 19.5 249 402-669 19-268 (296)
200 cd06609 STKc_MST3_like Catalyt 100.0 2.4E-37 5.2E-42 310.8 20.7 248 403-669 2-250 (274)
201 cd06643 STKc_SLK Catalytic dom 100.0 2.1E-37 4.6E-42 312.6 20.3 249 404-669 7-261 (282)
202 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-37 3.7E-42 310.7 19.4 252 402-669 9-264 (267)
203 cd05103 PTKc_VEGFR2 Catalytic 100.0 2E-37 4.2E-42 321.1 20.4 255 402-672 7-337 (343)
204 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-37 2.4E-42 321.3 18.4 254 402-669 1-265 (331)
205 cd08223 STKc_Nek4 Catalytic do 100.0 4.8E-37 1E-41 305.6 22.4 251 403-669 1-253 (257)
206 cd05112 PTKc_Itk Catalytic dom 100.0 3.5E-37 7.6E-42 306.4 21.4 250 402-672 4-256 (256)
207 cd00192 PTKc Catalytic domain 100.0 4E-37 8.7E-42 307.0 21.9 248 408-672 1-262 (262)
208 cd05623 STKc_MRCK_alpha Cataly 100.0 1.5E-37 3.3E-42 320.6 19.3 254 402-669 1-265 (332)
209 cd06619 PKc_MKK5 Catalytic dom 100.0 4.1E-37 8.9E-42 309.8 22.0 251 403-670 2-253 (279)
210 cd05082 PTKc_Csk Catalytic dom 100.0 2.7E-37 5.8E-42 307.1 20.2 248 402-673 6-255 (256)
211 cd05060 PTKc_Syk_like Catalyti 100.0 3.1E-37 6.8E-42 306.8 20.7 246 408-673 1-254 (257)
212 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.4E-37 1.2E-41 305.7 22.3 240 408-672 1-262 (262)
213 cd06615 PKc_MEK Catalytic doma 100.0 4.5E-37 9.9E-42 313.8 22.2 257 402-670 1-287 (308)
214 cd08218 STKc_Nek1 Catalytic do 100.0 3.1E-37 6.7E-42 306.8 20.4 251 403-669 1-252 (256)
215 cd06638 STKc_myosinIIIA Cataly 100.0 2.2E-37 4.7E-42 313.3 19.6 263 392-670 8-283 (286)
216 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.7E-37 3.7E-42 312.4 18.7 248 403-670 5-253 (277)
217 KOG0667 Dual-specificity tyros 100.0 8E-38 1.7E-42 320.7 16.4 195 403-609 187-390 (586)
218 cd06631 STKc_YSK4 Catalytic do 100.0 3.4E-37 7.4E-42 308.1 20.6 252 403-669 1-261 (265)
219 KOG0577 Serine/threonine prote 100.0 1.2E-38 2.7E-43 318.1 9.9 247 403-669 27-277 (948)
220 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.3E-37 1.1E-41 307.2 21.4 257 402-669 1-263 (267)
221 cd07876 STKc_JNK2 Catalytic do 100.0 4E-37 8.8E-42 321.2 21.4 259 400-669 19-314 (359)
222 cd07853 STKc_NLK Catalytic dom 100.0 1.8E-37 3.9E-42 325.3 18.8 259 403-669 1-287 (372)
223 cd06613 STKc_MAP4K3_like Catal 100.0 6.9E-37 1.5E-41 305.4 22.1 252 402-669 3-259 (262)
224 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.8E-37 6E-42 314.7 19.6 260 402-669 6-285 (301)
225 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.8E-37 8.2E-42 315.5 20.6 255 401-672 11-291 (314)
226 cd08227 PK_STRAD_alpha Pseudok 100.0 4E-37 8.6E-42 317.1 20.9 259 406-669 2-306 (327)
227 cd06611 STKc_SLK_like Catalyti 100.0 2.3E-37 5E-42 312.0 18.7 252 401-669 4-261 (280)
228 cd05042 PTKc_Aatyk Catalytic d 100.0 4E-37 8.6E-42 308.3 20.2 252 409-672 2-268 (269)
229 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.4E-37 7.4E-42 311.8 19.8 254 402-669 1-261 (286)
230 PTZ00036 glycogen synthase kin 100.0 1.6E-37 3.5E-42 330.8 18.3 257 401-669 65-350 (440)
231 cd07874 STKc_JNK3 Catalytic do 100.0 2E-37 4.4E-42 323.1 18.6 259 400-669 15-310 (355)
232 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.5E-37 9.9E-42 307.6 20.4 250 403-669 1-263 (267)
233 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.1E-37 4.5E-42 312.9 17.9 258 402-670 5-266 (284)
234 cd05574 STKc_phototropin_like 100.0 6.4E-37 1.4E-41 314.4 21.7 254 402-669 1-288 (316)
235 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.2E-37 1.3E-41 307.2 21.1 239 409-672 2-274 (274)
236 cd05047 PTKc_Tie Catalytic dom 100.0 6.7E-37 1.5E-41 306.7 21.2 248 408-673 1-267 (270)
237 cd05609 STKc_MAST Catalytic do 100.0 4.7E-37 1E-41 313.5 20.3 256 402-672 1-272 (305)
238 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.5E-37 7.6E-42 311.2 19.1 261 402-673 4-282 (284)
239 KOG0607 MAP kinase-interacting 100.0 1.3E-37 2.7E-42 289.5 14.4 262 394-669 75-360 (463)
240 cd08528 STKc_Nek10 Catalytic d 100.0 8E-37 1.7E-41 306.2 21.4 258 403-673 1-269 (269)
241 cd05058 PTKc_Met_Ron Catalytic 100.0 7.8E-37 1.7E-41 305.0 21.2 248 408-673 1-258 (262)
242 cd05041 PTKc_Fes_like Catalyti 100.0 7.8E-37 1.7E-41 302.9 21.0 248 408-673 1-251 (251)
243 cd05580 STKc_PKA Catalytic dom 100.0 8.4E-37 1.8E-41 309.3 21.7 247 402-669 1-253 (290)
244 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.6E-37 1.9E-41 305.5 21.1 252 409-672 2-267 (268)
245 cd06658 STKc_PAK5 Catalytic do 100.0 2.8E-37 6E-42 312.7 17.7 248 404-670 24-272 (292)
246 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.1E-37 1.1E-41 310.6 19.6 261 402-669 1-282 (286)
247 cd07863 STKc_CDK4 Catalytic do 100.0 5.5E-37 1.2E-41 310.7 19.8 260 403-669 1-284 (288)
248 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.9E-37 1.3E-41 309.9 19.9 263 402-673 4-282 (284)
249 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.8E-37 1.3E-41 316.8 20.0 254 402-672 12-291 (334)
250 cd05046 PTK_CCK4 Pseudokinase 100.0 9.7E-37 2.1E-41 306.6 21.1 257 402-673 5-275 (275)
251 KOG4279 Serine/threonine prote 100.0 1.1E-37 2.4E-42 316.4 13.9 244 409-669 582-831 (1226)
252 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.9E-37 8.4E-42 306.2 17.5 240 408-672 1-258 (258)
253 cd05057 PTKc_EGFR_like Catalyt 100.0 1.3E-36 2.8E-41 306.3 21.5 251 402-672 7-266 (279)
254 cd07868 STKc_CDK8 Catalytic do 100.0 9.6E-37 2.1E-41 313.2 21.0 194 407-609 6-218 (317)
255 PHA03211 serine/threonine kina 100.0 6.4E-37 1.4E-41 324.3 20.0 254 401-670 168-455 (461)
256 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-36 4.2E-41 303.5 22.5 251 402-672 6-263 (270)
257 cd07846 STKc_CDKL2_3 Catalytic 100.0 3E-37 6.5E-42 312.3 16.8 261 402-669 1-282 (286)
258 cd07875 STKc_JNK1 Catalytic do 100.0 6.1E-37 1.3E-41 320.5 19.6 259 400-669 22-317 (364)
259 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.7E-37 1.7E-41 308.5 19.3 260 392-669 6-278 (282)
260 cd05110 PTKc_HER4 Catalytic do 100.0 6.8E-37 1.5E-41 311.9 19.0 252 402-672 7-266 (303)
261 cd05044 PTKc_c-ros Catalytic d 100.0 7.6E-37 1.6E-41 306.4 18.8 249 408-673 1-269 (269)
262 KOG0579 Ste20-like serine/thre 100.0 2.9E-38 6.2E-43 317.5 8.4 249 404-669 34-288 (1187)
263 cd07841 STKc_CDK7 Catalytic do 100.0 1.2E-36 2.5E-41 309.8 20.5 262 403-670 1-282 (298)
264 cd06647 STKc_PAK_I Catalytic d 100.0 1.7E-36 3.8E-41 307.2 21.6 250 402-670 19-269 (293)
265 cd06626 STKc_MEKK4 Catalytic d 100.0 2E-36 4.3E-41 302.5 21.7 252 403-669 1-260 (264)
266 cd05083 PTKc_Chk Catalytic dom 100.0 1E-36 2.3E-41 302.5 19.5 247 402-673 6-253 (254)
267 cd06659 STKc_PAK6 Catalytic do 100.0 5.6E-37 1.2E-41 311.2 17.8 247 404-669 23-270 (297)
268 cd06651 STKc_MEKK3 Catalytic d 100.0 1.9E-36 4.2E-41 302.8 21.3 251 402-669 2-260 (266)
269 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.9E-36 4.1E-41 301.8 21.1 238 408-672 1-259 (259)
270 PTZ00266 NIMA-related protein 100.0 3.4E-37 7.3E-42 340.8 17.2 257 399-669 10-294 (1021)
271 cd06639 STKc_myosinIIIB Cataly 100.0 8.6E-37 1.9E-41 309.6 18.8 262 392-669 12-286 (291)
272 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.2E-36 4.8E-41 305.8 21.3 257 403-669 2-265 (287)
273 cd07878 STKc_p38beta_MAPK11 Ca 100.0 9.8E-37 2.1E-41 316.5 19.0 259 399-669 12-297 (343)
274 cd06608 STKc_myosinIII_like Ca 100.0 1.3E-36 2.7E-41 305.9 19.1 254 400-669 4-271 (275)
275 cd08217 STKc_Nek2 Catalytic do 100.0 2.7E-36 5.9E-41 301.6 21.2 253 403-670 1-262 (265)
276 cd06641 STKc_MST3 Catalytic do 100.0 2.9E-36 6.3E-41 303.3 21.3 248 402-669 4-252 (277)
277 KOG1035 eIF-2alpha kinase GCN2 100.0 2.9E-37 6.3E-42 333.2 14.9 255 398-669 475-870 (1351)
278 cd06623 PKc_MAPKK_plant_like C 100.0 3.3E-36 7.1E-41 300.9 21.5 251 403-669 2-255 (264)
279 smart00219 TyrKc Tyrosine kina 100.0 4E-36 8.6E-41 299.2 21.9 250 404-671 1-258 (258)
280 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-36 2.3E-41 304.6 17.9 253 403-669 2-256 (265)
281 cd06632 STKc_MEKK1_plant Catal 100.0 3E-36 6.6E-41 300.0 20.9 249 403-669 1-254 (258)
282 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.4E-36 7.4E-41 302.1 21.2 255 403-669 2-268 (272)
283 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-36 2.8E-41 307.3 18.1 260 403-669 1-280 (284)
284 cd06917 STKc_NAK1_like Catalyt 100.0 4E-36 8.7E-41 302.5 21.6 248 403-669 2-254 (277)
285 cd07844 STKc_PCTAIRE_like Cata 100.0 3.1E-36 6.7E-41 305.6 20.9 260 402-669 5-287 (291)
286 cd06614 STKc_PAK Catalytic dom 100.0 2.5E-36 5.5E-41 305.3 20.1 252 400-669 17-269 (286)
287 cd05578 STKc_Yank1 Catalytic d 100.0 9.3E-37 2E-41 303.7 16.6 250 403-669 1-254 (258)
288 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.7E-36 5.9E-41 306.0 20.1 262 400-669 3-287 (291)
289 PHA03207 serine/threonine kina 100.0 1.8E-36 3.9E-41 319.4 19.3 253 402-669 92-374 (392)
290 cd06607 STKc_TAO Catalytic dom 100.0 5E-36 1.1E-40 306.2 21.9 248 402-669 15-266 (307)
291 PTZ00284 protein kinase; Provi 100.0 2.1E-36 4.5E-41 326.3 19.3 260 396-669 123-437 (467)
292 cd08220 STKc_Nek8 Catalytic do 100.0 6.4E-36 1.4E-40 297.3 21.4 250 403-669 1-252 (256)
293 cd05577 STKc_GRK Catalytic dom 100.0 3.4E-36 7.4E-41 302.8 19.5 247 410-669 1-253 (277)
294 cd07867 STKc_CDC2L6 Catalytic 100.0 4.7E-36 1E-40 308.3 20.8 194 407-609 6-218 (317)
295 PHA03209 serine/threonine kina 100.0 3.3E-36 7.1E-41 313.4 19.7 191 401-607 65-256 (357)
296 cd06648 STKc_PAK_II Catalytic 100.0 5.2E-36 1.1E-40 302.5 20.6 248 403-669 20-268 (285)
297 cd06652 STKc_MEKK2 Catalytic d 100.0 5.2E-36 1.1E-40 299.5 20.2 250 402-669 2-260 (265)
298 cd06630 STKc_MEKK1 Catalytic d 100.0 7.1E-36 1.5E-40 299.2 21.1 254 403-669 1-263 (268)
299 cd07843 STKc_CDC2L1 Catalytic 100.0 2.9E-36 6.4E-41 306.0 18.6 258 402-669 5-289 (293)
300 cd07835 STKc_CDK1_like Catalyt 100.0 2.7E-36 6E-41 304.7 18.0 260 404-669 1-279 (283)
301 cd07860 STKc_CDK2_3 Catalytic 100.0 2.5E-36 5.5E-41 305.1 17.7 261 403-669 1-280 (284)
302 cd08225 STKc_Nek5 Catalytic do 100.0 2.9E-36 6.2E-41 300.0 17.6 251 403-669 1-253 (257)
303 KOG0584 Serine/threonine prote 100.0 3.8E-37 8.2E-42 312.5 11.1 247 406-669 44-295 (632)
304 PLN00113 leucine-rich repeat r 100.0 5.3E-36 1.2E-40 352.8 22.4 317 1-317 245-585 (968)
305 cd07832 STKc_CCRK Catalytic do 100.0 9.2E-36 2E-40 301.4 20.8 260 403-669 1-281 (286)
306 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.5E-35 3.2E-40 297.7 22.2 254 404-673 1-271 (273)
307 cd07836 STKc_Pho85 Catalytic d 100.0 5.6E-36 1.2E-40 302.6 19.0 261 403-669 1-280 (284)
308 KOG0586 Serine/threonine prote 100.0 3.2E-36 6.8E-41 305.5 16.9 249 401-669 55-305 (596)
309 cd07833 STKc_CDKL Catalytic do 100.0 3.8E-36 8.3E-41 304.6 17.6 261 402-669 1-284 (288)
310 KOG0690 Serine/threonine prote 100.0 4.9E-37 1.1E-41 286.0 10.0 243 402-662 168-411 (516)
311 cd05611 STKc_Rim15_like Cataly 100.0 6.8E-36 1.5E-40 297.8 19.0 246 408-671 2-249 (260)
312 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-35 2.6E-40 296.5 20.6 243 410-669 1-251 (262)
313 KOG0986 G protein-coupled rece 100.0 5.2E-37 1.1E-41 298.3 10.2 248 401-662 184-433 (591)
314 cd05633 STKc_GRK3 Catalytic do 100.0 8.9E-36 1.9E-40 299.7 19.4 245 409-670 1-255 (279)
315 KOG4194 Membrane glycoprotein 100.0 3.5E-38 7.6E-43 315.0 1.5 318 1-318 134-454 (873)
316 cd05579 STKc_MAST_like Catalyt 100.0 6.8E-36 1.5E-40 298.8 18.0 246 410-671 1-255 (265)
317 cd05122 PKc_STE Catalytic doma 100.0 2.1E-35 4.6E-40 292.8 21.2 249 403-669 1-250 (253)
318 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.4E-35 3.1E-40 299.5 20.2 252 402-669 1-260 (283)
319 cd07837 STKc_CdkB_plant Cataly 100.0 1E-35 2.2E-40 302.5 19.1 263 402-669 1-290 (295)
320 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-35 2.7E-40 300.5 19.1 244 407-669 25-269 (292)
321 cd06635 STKc_TAO1 Catalytic do 100.0 3.3E-35 7.1E-40 301.4 21.8 248 403-670 26-277 (317)
322 cd07845 STKc_CDK10 Catalytic d 100.0 1.5E-35 3.2E-40 303.2 19.1 262 401-669 6-289 (309)
323 cd07842 STKc_CDK8_like Catalyt 100.0 1E-35 2.2E-40 305.8 17.8 263 403-669 1-312 (316)
324 cd06606 STKc_MAPKKK Catalytic 100.0 5.2E-35 1.1E-39 291.3 22.1 251 403-669 1-256 (260)
325 PLN00009 cyclin-dependent kina 100.0 1.6E-35 3.6E-40 300.7 18.5 262 402-669 2-283 (294)
326 KOG0200 Fibroblast/platelet-de 100.0 1.4E-35 3E-40 325.1 19.2 257 400-672 294-577 (609)
327 cd06627 STKc_Cdc7_like Catalyt 100.0 3.7E-35 8.1E-40 291.4 20.2 249 403-669 1-250 (254)
328 cd06616 PKc_MKK4 Catalytic dom 100.0 1.5E-35 3.2E-40 300.1 17.6 253 403-669 5-266 (288)
329 cd05581 STKc_PDK1 Catalytic do 100.0 2.6E-35 5.7E-40 297.1 18.5 250 402-669 1-276 (280)
330 cd08215 STKc_Nek Catalytic dom 100.0 7E-35 1.5E-39 290.1 21.3 252 403-669 1-254 (258)
331 KOG0666 Cyclin C-dependent kin 100.0 2.2E-36 4.8E-41 280.3 9.5 204 401-609 23-242 (438)
332 PHA02882 putative serine/threo 100.0 5.2E-35 1.1E-39 296.4 20.4 259 402-672 12-294 (294)
333 cd08530 STKc_CNK2-like Catalyt 100.0 3.8E-35 8.2E-40 291.8 18.9 250 403-669 1-252 (256)
334 PHA03390 pk1 serine/threonine- 100.0 8.1E-35 1.8E-39 290.7 21.2 250 394-669 6-261 (267)
335 KOG4645 MAPKKK (MAP kinase kin 100.0 7.1E-37 1.5E-41 331.7 6.7 251 401-669 1234-1493(1509)
336 cd07850 STKc_JNK Catalytic dom 100.0 6.8E-35 1.5E-39 303.7 21.4 259 400-669 14-310 (353)
337 cd05118 STKc_CMGC Catalytic do 100.0 7.6E-35 1.6E-39 294.3 21.1 259 404-669 1-279 (283)
338 cd07838 STKc_CDK4_6_like Catal 100.0 8.5E-35 1.8E-39 294.5 21.4 259 404-669 1-283 (287)
339 cd07849 STKc_ERK1_2_like Catal 100.0 2.6E-35 5.6E-40 304.8 17.8 260 401-670 4-292 (336)
340 KOG4250 TANK binding protein k 100.0 9.5E-36 2.1E-40 306.1 14.3 261 404-670 15-306 (732)
341 KOG0983 Mitogen-activated prot 100.0 7.1E-36 1.5E-40 272.2 11.8 249 405-669 95-348 (391)
342 cd07840 STKc_CDK9_like Catalyt 100.0 5.5E-35 1.2E-39 295.9 19.3 259 404-669 1-283 (287)
343 cd06618 PKc_MKK7 Catalytic dom 100.0 6.5E-35 1.4E-39 296.5 19.7 254 401-670 14-273 (296)
344 cd07852 STKc_MAPK15 Catalytic 100.0 3.6E-35 7.7E-40 304.0 18.1 262 400-670 5-295 (337)
345 cd07831 STKc_MOK Catalytic dom 100.0 8.2E-35 1.8E-39 293.8 20.3 256 404-669 1-278 (282)
346 cd06634 STKc_TAO2 Catalytic do 100.0 7.5E-35 1.6E-39 297.5 20.0 249 402-670 15-267 (308)
347 KOG0604 MAP kinase-activated p 100.0 7.7E-36 1.7E-40 275.5 11.2 251 402-669 61-321 (400)
348 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-34 2.6E-39 297.4 21.2 258 406-669 6-294 (314)
349 cd05606 STKc_beta_ARK Catalyti 100.0 8.5E-35 1.8E-39 292.5 19.6 244 409-669 1-254 (278)
350 cd05613 STKc_MSK1_N N-terminal 100.0 8E-35 1.7E-39 295.0 19.6 253 403-669 1-267 (290)
351 cd06633 STKc_TAO3 Catalytic do 100.0 1.7E-34 3.6E-39 295.5 21.9 246 404-669 23-272 (313)
352 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-34 3E-39 289.0 20.9 251 402-669 2-260 (264)
353 PHA03210 serine/threonine kina 100.0 5.3E-35 1.1E-39 316.1 18.7 266 400-669 146-453 (501)
354 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-34 3.8E-39 285.9 20.7 241 410-668 1-245 (250)
355 cd08226 PK_STRAD_beta Pseudoki 100.0 1.9E-34 4.1E-39 297.3 21.4 255 408-669 4-307 (328)
356 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.7E-35 1.2E-39 302.2 17.5 262 401-670 4-291 (337)
357 cd05583 STKc_MSK_N N-terminal 100.0 6.9E-35 1.5E-39 295.2 17.6 256 403-672 1-265 (288)
358 cd07834 STKc_MAPK Catalytic do 100.0 8E-35 1.7E-39 300.8 18.2 259 403-669 1-288 (330)
359 cd07864 STKc_CDK12 Catalytic d 100.0 9.7E-35 2.1E-39 296.4 18.3 264 399-669 4-298 (302)
360 cd08222 STKc_Nek11 Catalytic d 100.0 8.9E-35 1.9E-39 289.8 17.4 252 403-669 1-256 (260)
361 cd07855 STKc_ERK5 Catalytic do 100.0 6.7E-35 1.4E-39 301.5 17.0 261 401-669 4-293 (334)
362 cd07865 STKc_CDK9 Catalytic do 100.0 4E-34 8.7E-39 293.0 21.8 261 402-669 12-306 (310)
363 cd07829 STKc_CDK_like Catalyti 100.0 1.6E-34 3.4E-39 291.8 17.4 259 404-669 1-278 (282)
364 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.7E-34 5.9E-39 297.9 19.1 266 392-669 7-299 (345)
365 PTZ00024 cyclin-dependent prot 100.0 3.3E-34 7.1E-39 296.7 19.7 261 402-669 8-312 (335)
366 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.7E-34 5.9E-39 295.5 18.4 260 398-669 6-287 (328)
367 cd07830 STKc_MAK_like Catalyti 100.0 4.2E-34 9E-39 288.8 19.4 258 404-669 1-279 (283)
368 KOG0696 Serine/threonine prote 100.0 2.6E-35 5.7E-40 282.7 9.7 243 402-662 349-593 (683)
369 cd05610 STKc_MASTL Catalytic d 100.0 4.7E-34 1E-38 318.2 21.1 148 402-555 4-152 (669)
370 cd07866 STKc_BUR1 Catalytic do 100.0 3E-34 6.6E-39 294.1 17.9 262 401-669 7-307 (311)
371 KOG0612 Rho-associated, coiled 100.0 2.3E-35 5E-40 316.0 9.0 253 399-668 72-336 (1317)
372 KOG4236 Serine/threonine prote 100.0 3.8E-35 8.2E-40 289.5 9.5 245 407-668 569-817 (888)
373 cd07879 STKc_p38delta_MAPK13 C 100.0 4.9E-34 1.1E-38 295.7 18.2 256 401-669 14-296 (342)
374 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.6E-34 1.4E-38 294.7 18.4 258 400-669 13-297 (343)
375 KOG4194 Membrane glycoprotein 100.0 8.1E-36 1.8E-40 298.1 3.1 297 1-298 87-383 (873)
376 cd07854 STKc_MAPK4_6 Catalytic 100.0 8.2E-34 1.8E-38 294.1 16.6 257 402-669 5-299 (342)
377 cd07851 STKc_p38 Catalytic dom 100.0 7.7E-34 1.7E-38 294.4 16.3 258 400-669 13-297 (343)
378 KOG1024 Receptor-like protein 100.0 9.2E-34 2E-38 270.6 15.1 261 395-672 277-553 (563)
379 KOG0662 Cyclin-dependent kinas 100.0 8E-34 1.7E-38 242.8 12.5 260 403-669 3-282 (292)
380 cd07857 STKc_MPK1 Catalytic do 100.0 2.8E-33 6E-38 289.1 18.6 258 403-669 1-291 (332)
381 KOG0587 Traf2- and Nck-interac 100.0 3.4E-33 7.4E-38 292.7 17.7 259 393-669 10-281 (953)
382 KOG1006 Mitogen-activated prot 100.0 1.7E-35 3.7E-40 268.7 0.4 250 407-669 69-326 (361)
383 cd05576 STKc_RPK118_like Catal 100.0 1.4E-32 3.1E-37 269.4 18.3 219 413-664 4-223 (237)
384 KOG0695 Serine/threonine prote 100.0 2.3E-33 4.9E-38 262.6 11.3 251 401-662 249-502 (593)
385 KOG1151 Tousled-like protein k 100.0 6.9E-34 1.5E-38 275.2 8.0 256 402-668 463-739 (775)
386 KOG0669 Cyclin T-dependent kin 100.0 2.1E-34 4.5E-39 259.5 3.5 261 402-669 17-314 (376)
387 KOG0614 cGMP-dependent protein 100.0 5.6E-34 1.2E-38 280.4 5.5 243 402-663 420-665 (732)
388 KOG0603 Ribosomal protein S6 k 100.0 4.7E-33 1E-37 284.1 12.3 239 401-669 321-562 (612)
389 PLN03225 Serine/threonine-prot 100.0 4.6E-32 1E-36 294.3 19.5 259 400-669 130-449 (566)
390 smart00220 S_TKc Serine/Threon 100.0 1.1E-31 2.5E-36 264.3 19.0 239 414-669 1-240 (244)
391 KOG0671 LAMMER dual specificit 100.0 1E-32 2.3E-37 263.9 8.7 258 400-669 87-405 (415)
392 KOG1027 Serine/threonine prote 100.0 9.1E-33 2E-37 288.2 8.8 242 404-669 511-766 (903)
393 PLN03224 probable serine/threo 100.0 4.8E-31 1E-35 278.6 19.4 264 401-669 144-499 (507)
394 KOG0664 Nemo-like MAPK-related 100.0 2.4E-32 5.3E-37 248.9 3.7 259 404-670 55-343 (449)
395 KOG0668 Casein kinase II, alph 100.0 2.5E-31 5.5E-36 236.3 7.6 252 402-669 38-321 (338)
396 KOG0984 Mitogen-activated prot 100.0 4.4E-31 9.5E-36 231.4 8.9 206 397-608 41-253 (282)
397 KOG0608 Warts/lats-like serine 100.0 1.9E-30 4.1E-35 261.7 13.4 201 403-609 630-873 (1034)
398 KOG1290 Serine/threonine prote 100.0 4.9E-30 1.1E-34 252.2 15.0 132 402-541 78-222 (590)
399 cd00180 PKc Catalytic domain o 100.0 1.2E-28 2.6E-33 237.1 21.7 212 410-671 1-215 (215)
400 KOG1152 Signal transduction se 100.0 2.6E-30 5.7E-35 258.6 9.4 210 391-608 550-770 (772)
401 KOG1345 Serine/threonine kinas 100.0 4.2E-30 9.1E-35 234.4 7.6 252 401-670 23-284 (378)
402 KOG0665 Jun-N-terminal kinase 100.0 1.2E-29 2.6E-34 237.3 9.1 256 402-669 17-309 (369)
403 KOG0444 Cytoskeletal regulator 100.0 2E-31 4.4E-36 268.4 -3.5 289 2-298 65-380 (1255)
404 KOG0576 Mitogen-activated prot 100.0 5.4E-30 1.2E-34 260.6 4.4 252 401-669 14-270 (829)
405 KOG0670 U4/U6-associated splic 100.0 2.4E-29 5.2E-34 248.6 7.8 268 392-669 422-745 (752)
406 KOG0444 Cytoskeletal regulator 100.0 1.5E-30 3.3E-35 262.0 -1.9 276 6-288 93-394 (1255)
407 smart00221 STYKc Protein kinas 100.0 3.1E-27 6.7E-32 229.8 19.6 199 404-609 1-202 (225)
408 KOG0472 Leucine-rich repeat pr 99.9 1E-29 2.2E-34 244.0 -7.7 306 1-315 100-540 (565)
409 KOG0472 Leucine-rich repeat pr 99.9 3E-29 6.6E-34 240.7 -5.7 270 15-293 182-541 (565)
410 KOG1167 Serine/threonine prote 99.9 8E-27 1.7E-31 227.0 8.6 198 397-608 31-279 (418)
411 smart00750 KIND kinase non-cat 99.9 1E-25 2.2E-30 210.0 13.7 165 486-672 1-167 (176)
412 PLN00181 protein SPA1-RELATED; 99.9 1.2E-26 2.7E-31 265.5 8.8 194 457-669 28-264 (793)
413 KOG0195 Integrin-linked kinase 99.9 4.7E-26 1E-30 207.9 7.0 248 404-673 192-445 (448)
414 KOG4237 Extracellular matrix p 99.9 1.6E-27 3.5E-32 228.8 -5.0 292 7-300 60-366 (498)
415 PRK09188 serine/threonine prot 99.9 8.6E-24 1.9E-28 214.1 15.2 168 398-581 14-194 (365)
416 KOG4237 Extracellular matrix p 99.9 1.1E-25 2.3E-30 216.3 -2.2 296 21-319 51-362 (498)
417 PRK15387 E3 ubiquitin-protein 99.9 1.3E-22 2.9E-27 221.8 16.6 254 2-299 211-464 (788)
418 KOG1164 Casein kinase (serine/ 99.9 3.3E-22 7.3E-27 204.1 17.0 255 403-672 19-295 (322)
419 COG0515 SPS1 Serine/threonine 99.9 2.2E-21 4.9E-26 201.3 21.7 260 404-669 2-274 (384)
420 KOG0590 Checkpoint kinase and 99.9 4.3E-23 9.4E-28 223.2 7.7 254 405-669 321-584 (601)
421 PRK10359 lipopolysaccharide co 99.9 8E-22 1.7E-26 185.2 11.8 186 388-601 15-216 (232)
422 KOG1240 Protein kinase contain 99.9 1.4E-22 3E-27 217.8 6.7 245 403-670 24-291 (1431)
423 PLN03210 Resistant to P. syrin 99.9 1.3E-20 2.8E-25 222.5 22.4 274 7-295 579-885 (1153)
424 PF14531 Kinase-like: Kinase-l 99.9 4.3E-21 9.3E-26 185.7 14.2 236 403-661 13-288 (288)
425 cd05147 RIO1_euk RIO kinase fa 99.9 2E-21 4.4E-26 181.2 11.5 143 407-558 2-168 (190)
426 KOG1163 Casein kinase (serine/ 99.9 1.6E-21 3.6E-26 175.5 9.9 255 394-665 8-275 (341)
427 KOG0618 Serine/threonine phosp 99.9 5.3E-23 1.2E-27 217.7 0.3 298 2-316 166-489 (1081)
428 PRK15387 E3 ubiquitin-protein 99.8 1.1E-20 2.5E-25 206.7 16.3 258 16-316 201-458 (788)
429 PRK15370 E3 ubiquitin-protein 99.8 4.3E-21 9.2E-26 211.6 12.7 248 16-294 178-429 (754)
430 KOG1165 Casein kinase (serine/ 99.8 1.9E-20 4E-25 176.5 15.0 199 402-611 28-240 (449)
431 PLN03210 Resistant to P. syrin 99.8 3.7E-20 8.1E-25 218.6 21.2 272 7-292 603-905 (1153)
432 cd05145 RIO1_like RIO kinase f 99.8 4E-20 8.7E-25 173.5 15.2 142 407-558 2-168 (190)
433 PRK15370 E3 ubiquitin-protein 99.8 1.2E-20 2.6E-25 208.1 12.7 237 2-269 188-428 (754)
434 PRK12274 serine/threonine prot 99.8 5.6E-20 1.2E-24 168.5 14.5 187 404-608 4-208 (218)
435 KOG0618 Serine/threonine phosp 99.8 2.1E-22 4.6E-27 213.1 -1.8 269 15-292 218-488 (1081)
436 cd00116 LRR_RI Leucine-rich re 99.8 5.5E-22 1.2E-26 203.9 -0.4 273 20-292 2-319 (319)
437 KOG1023 Natriuretic peptide re 99.8 2E-20 4.3E-25 192.6 11.1 209 455-672 1-222 (484)
438 KOG4158 BRPK/PTEN-induced prot 99.8 1.7E-19 3.7E-24 173.9 10.9 193 459-669 274-509 (598)
439 KOG0603 Ribosomal protein S6 k 99.8 6.8E-21 1.5E-25 195.5 1.0 227 409-664 1-232 (612)
440 cd00116 LRR_RI Leucine-rich re 99.8 5.8E-21 1.2E-25 196.3 -1.0 263 6-268 13-319 (319)
441 PRK10345 hypothetical protein; 99.8 2.8E-18 6.1E-23 161.2 14.2 136 405-554 5-156 (210)
442 KOG1166 Mitotic checkpoint ser 99.8 1.6E-18 3.5E-23 190.9 12.7 199 396-606 692-902 (974)
443 KOG1033 eIF-2alpha kinase PEK/ 99.8 3.4E-19 7.3E-24 179.6 3.7 174 475-668 330-510 (516)
444 smart00090 RIO RIO-like kinase 99.7 8.5E-18 1.8E-22 162.3 12.6 146 402-558 28-199 (237)
445 cd05144 RIO2_C RIO kinase fami 99.7 1E-17 2.2E-22 158.8 12.6 148 395-558 8-176 (198)
446 PRK14879 serine/threonine prot 99.7 1.6E-17 3.5E-22 159.5 14.0 137 408-556 2-143 (211)
447 KOG0617 Ras suppressor protein 99.7 8E-20 1.7E-24 156.1 -3.8 158 108-270 29-187 (264)
448 KOG0617 Ras suppressor protein 99.7 1.8E-19 3.9E-24 153.9 -2.0 167 131-302 28-195 (264)
449 TIGR03724 arch_bud32 Kae1-asso 99.7 4.8E-17 1E-21 154.6 13.6 134 409-557 1-139 (199)
450 PRK09605 bifunctional UGMP fam 99.7 4.7E-17 1E-21 177.7 13.4 142 400-557 331-477 (535)
451 KOG0606 Microtubule-associated 99.7 1.9E-17 4.2E-22 178.6 5.9 206 402-662 83-304 (1205)
452 cd05119 RIO RIO kinase family, 99.7 6.8E-16 1.5E-20 145.1 11.9 139 407-558 2-165 (187)
453 cd05120 APH_ChoK_like Aminogly 99.6 1.4E-15 3E-20 137.9 11.0 135 406-556 2-138 (155)
454 PRK01723 3-deoxy-D-manno-octul 99.6 5.2E-15 1.1E-19 143.3 13.1 139 407-557 36-192 (239)
455 KOG0590 Checkpoint kinase and 99.6 2.2E-16 4.8E-21 171.2 0.4 254 402-668 20-284 (601)
456 TIGR01982 UbiB 2-polyprenylphe 99.5 1.3E-13 2.8E-18 145.3 12.5 149 402-559 118-309 (437)
457 KOG0532 Leucine-rich repeat (L 99.5 3E-15 6.5E-20 151.4 -0.6 173 115-296 78-250 (722)
458 PLN03150 hypothetical protein; 99.5 2.1E-13 4.5E-18 150.6 12.0 118 209-327 419-538 (623)
459 KOG0601 Cyclin-dependent kinas 99.5 1.2E-13 2.5E-18 142.8 8.0 248 403-669 115-378 (524)
460 KOG1266 Protein kinase [Signal 99.4 2.4E-13 5.2E-18 128.9 7.4 202 452-669 118-330 (458)
461 PRK04750 ubiB putative ubiquin 99.4 2.2E-12 4.7E-17 137.3 15.4 147 401-558 119-315 (537)
462 KOG0532 Leucine-rich repeat (L 99.4 1.1E-14 2.4E-19 147.3 -2.2 213 69-291 55-271 (722)
463 COG4886 Leucine-rich repeat (L 99.4 3.8E-13 8.3E-18 142.2 8.7 198 44-250 97-295 (394)
464 KOG1909 Ran GTPase-activating 99.4 4.6E-14 9.9E-19 135.1 -0.7 247 36-293 26-311 (382)
465 KOG1243 Protein kinase [Genera 99.4 7E-12 1.5E-16 130.8 14.9 167 422-603 33-199 (690)
466 KOG3207 Beta-tubulin folding c 99.4 8.1E-14 1.8E-18 137.0 0.5 209 38-246 119-340 (505)
467 COG4886 Leucine-rich repeat (L 99.4 8.2E-13 1.8E-17 139.7 8.0 199 92-299 97-296 (394)
468 KOG1909 Ran GTPase-activating 99.4 4.8E-14 1E-18 135.0 -2.1 240 10-269 24-311 (382)
469 KOG1259 Nischarin, modulator o 99.3 3.4E-13 7.3E-18 126.1 1.9 133 159-297 283-416 (490)
470 cd05151 ChoK Choline Kinase (C 99.3 5.3E-12 1.1E-16 116.6 9.0 131 407-556 3-136 (170)
471 KOG3207 Beta-tubulin folding c 99.3 3.9E-13 8.5E-18 132.2 0.4 209 13-222 118-340 (505)
472 KOG1259 Nischarin, modulator o 99.3 4.9E-13 1.1E-17 125.0 0.8 226 39-273 181-416 (490)
473 PF14580 LRR_9: Leucine-rich r 99.3 3.4E-12 7.4E-17 115.2 4.7 108 14-125 17-126 (175)
474 cd05146 RIO3_euk RIO kinase fa 99.3 9.3E-11 2E-15 108.1 13.8 139 408-558 3-175 (197)
475 KOG0601 Cyclin-dependent kinas 99.3 5.7E-12 1.2E-16 130.5 6.0 249 398-670 261-514 (524)
476 KOG3087 Serine/threonine prote 99.2 1.2E-10 2.6E-15 102.2 12.9 146 406-556 11-165 (229)
477 COG3642 Mn2+-dependent serine/ 99.2 1E-10 2.2E-15 103.5 12.2 134 408-556 2-140 (204)
478 KOG0531 Protein phosphatase 1, 99.2 6.1E-13 1.3E-17 140.7 -2.2 217 38-268 70-289 (414)
479 PLN03150 hypothetical protein; 99.2 4.2E-11 9.2E-16 132.4 11.3 113 185-297 419-532 (623)
480 KOG0531 Protein phosphatase 1, 99.2 1.3E-12 2.9E-17 138.1 -0.8 245 14-272 70-321 (414)
481 PF14580 LRR_9: Leucine-rich r 99.2 2.7E-11 5.8E-16 109.4 6.6 122 161-286 20-146 (175)
482 COG4248 Uncharacterized protei 99.2 1.1E-09 2.3E-14 108.1 17.5 256 405-672 14-298 (637)
483 cd05154 ACAD10_11_like Acyl-Co 99.2 2.5E-10 5.5E-15 110.5 11.8 143 408-556 4-206 (223)
484 KOG0606 Microtubule-associated 99.1 1.7E-11 3.7E-16 133.4 1.7 250 401-665 803-1084(1205)
485 PF01163 RIO1: RIO1 family; I 99.0 3.8E-09 8.1E-14 97.3 13.1 129 417-558 1-157 (188)
486 KOG4658 Apoptotic ATPase [Sign 99.0 3E-10 6.6E-15 128.2 5.4 128 16-146 523-652 (889)
487 KOG4658 Apoptotic ATPase [Sign 99.0 3.2E-10 6.9E-15 128.0 4.4 259 7-271 537-809 (889)
488 PRK15123 lipopolysaccharide co 99.0 1.4E-08 3E-13 99.5 14.9 144 408-556 28-194 (268)
489 PF13855 LRR_8: Leucine rich r 98.9 7.8E-10 1.7E-14 82.1 4.1 59 41-99 2-60 (61)
490 KOG2982 Uncharacterized conser 98.9 3.3E-10 7.1E-15 106.3 2.5 211 36-246 41-263 (418)
491 PF13855 LRR_8: Leucine rich r 98.9 8.8E-10 1.9E-14 81.8 3.6 61 16-76 1-61 (61)
492 KOG3741 Poly(A) ribonuclease s 98.9 5.9E-08 1.3E-12 98.7 16.1 216 414-670 288-521 (655)
493 COG0478 RIO-like serine/threon 98.8 2E-08 4.3E-13 94.6 10.7 138 404-556 93-251 (304)
494 KOG2137 Protein kinase [Signal 98.7 2.3E-09 5E-14 112.8 1.3 148 511-669 106-264 (700)
495 PRK09902 hypothetical protein; 98.7 1.6E-07 3.4E-12 86.8 13.0 141 410-556 26-179 (216)
496 KOG1859 Leucine-rich repeat pr 98.7 1.4E-10 3E-15 121.1 -7.9 127 162-294 166-293 (1096)
497 KOG2982 Uncharacterized conser 98.7 1.6E-09 3.6E-14 101.7 -1.1 209 64-296 45-265 (418)
498 COG0661 AarF Predicted unusual 98.7 1.5E-07 3.2E-12 100.0 11.4 143 408-560 131-318 (517)
499 PF06293 Kdo: Lipopolysacchari 98.7 2.2E-07 4.8E-12 88.1 11.5 127 425-557 31-171 (206)
500 KOG2120 SCF ubiquitin ligase, 98.6 1E-09 2.2E-14 103.2 -5.5 176 89-266 186-373 (419)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.1e-81 Score=737.34 Aligned_cols=643 Identities=32% Similarity=0.530 Sum_probs=462.7
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|++++.+|.++.++++|++|+|++|.+++..|..+.++++|+.|++++|.+.+..|..+..+++|+.|+|++|.+.+..+
T Consensus 270 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred CeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC
Confidence 56777777777777777777777777777777777777777777777777777777777777777777777777776666
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCC--------
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP-------- 153 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-------- 153 (673)
..+..+++|+.|+|++|++.+..+..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|++++..|
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~ 429 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPL 429 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCC
Confidence 667777777777777777665555555555555555555555555455555555555555555555444444
Q ss_pred ----------------ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccC
Q 005864 154 ----------------IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217 (673)
Q Consensus 154 ----------------~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 217 (673)
..+..+++|+.|++++|++.+.+|..+ ..++|+.|++++|.+++..|..+.++++|+.|++++
T Consensus 430 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 508 (968)
T PLN00113 430 VYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSE 508 (968)
T ss_pred CCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcC
Confidence 444445555555555555554444433 346777888888888888888888999999999999
Q ss_pred CcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 218 n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|++.+..|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..++.|+.|++++|++.+.+|
T Consensus 509 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 509 NKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccccCCcCCCCCCC--CCcccccccccccccccceeeeehhhhhHHHHHHHHH-hhhheeecccccCCCC
Q 005864 298 NSTGFQYDPIQALRGNRGLCGDVE--GFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVI-GIIFGRTKRTSKENKG 374 (673)
Q Consensus 298 ~~~~~~~~~~~~~~~n~~~c~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~-~~~~~~~k~~~~~~~~ 374 (673)
....+.......+.||+.+||... +.+.|... . ....|.++++.++++++++++++ +++++++++..+.++.
T Consensus 589 ~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (968)
T PLN00113 589 STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV----R-KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRV 663 (968)
T ss_pred CcchhcccChhhhcCCccccCCccccCCCCCccc----c-ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 887777777788999999998653 34456421 1 12223333333333333333322 2233232221111111
Q ss_pred CcccCCCcceeeecc----CcccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHH
Q 005864 375 SCENHRGLLSILTFE----GKIVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFL 449 (673)
Q Consensus 375 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~ 449 (673)
. ...+......+. ..+.++++. ..|...+.||+|+||.||+|.. .+|+.||||++...... ..
T Consensus 664 ~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~ 731 (968)
T PLN00113 664 E--NEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PS 731 (968)
T ss_pred c--cccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cH
Confidence 1 111111111111 123344443 4577888999999999999976 57999999988643211 12
Q ss_pred HHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 005864 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529 (673)
Q Consensus 450 ~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 529 (673)
.|++.+++++|||||+++|+|.+++..++||||+++|+|.++++. ++|.++.+++.|+|+||+|||..+.++|+
T Consensus 732 ~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 805 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVV 805 (968)
T ss_pred HHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCee
Confidence 468889999999999999999999999999999999999999953 78999999999999999999966566999
Q ss_pred EecCCCCCeEeCCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 530 H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
||||||+||+++.++.+++. ||........ ....+++.|+|||++.+..++.++|||||||++|||+||+.||+.
T Consensus 806 H~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 806 VGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred cCCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 99999999999999888875 6655433211 223678999999999999999999999999999999999999863
Q ss_pred ccccccc----c--cccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 610 ISLLSSS----S--SNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 610 ~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....... . ..........+++.+............++.+++.+||+.||++||||+||+++|++
T Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~ 950 (968)
T PLN00113 881 EFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES 950 (968)
T ss_pred ccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHH
Confidence 2111000 0 00011223344554433333344566778999999999999999999999999874
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-53 Score=429.55 Aligned_cols=280 Identities=41% Similarity=0.676 Sum_probs=235.9
Q ss_pred cCcccHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceee
Q 005864 389 EGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468 (673)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 468 (673)
...+++.|+..||++|...+.||+|+||.||+|..++|+.||||++....... .++|.+|++++.+++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 34589999999999999999999999999999999999999999876543221 456999999999999999999999
Q ss_pred eeecCC-eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceE
Q 005864 469 FCSHPR-HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 469 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 547 (673)
||.+.+ ..++|||||++|+|.++++..... .++|.+|.+||.++|+||+|||+.+.|+|+||||||+|||+|+++++|
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999988 599999999999999999987543 789999999999999999999999988999999999999999999999
Q ss_pred EecccceeecCCCCCCceec-ccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccc------c-ccc
Q 005864 548 VSDFGIAKFLKPGSSNWTEF-AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSS------S-SSN 619 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~-~~~ 619 (673)
|+|||+|+............ .||.+|+|||+...+..+.|+|||||||++.|++||+.|.+....... . ...
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 99999996544312222222 899999999999999999999999999999999999998774321100 0 011
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
......+++|+++.............+.+++.+|++.+|.+||+|.||+++|+
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 12367889999986321111256677999999999999999999999999985
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-49 Score=397.43 Aligned_cols=255 Identities=29% Similarity=0.509 Sum_probs=211.7
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-eeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-HSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 481 (673)
.+...+.+|+|+||+||+|.+.....||||++......... .++|.+|+.+|.+++|||||+++|+|.++. ..++|||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence 34445669999999999999965445999999876555444 789999999999999999999999999887 7999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC-eEEecCCCCCeEeCCCC-ceEEecccceeecCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP-IVHRDISSKNVLLSSEY-EARVSDFGIAKFLKP 559 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~ 559 (673)
||++|+|.++++.. ....+++..+.++|.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 121 y~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred eCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999999884 236799999999999999999999999 7 99999999999999997 999999999987754
Q ss_pred CCCCceecccccccccccccc--cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 560 GSSNWTEFAGTFGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.....+...||+.|||||++. ...|+.|+||||||+++|||+||+.||............ .. -..+...+..
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v----~~--~~~Rp~~p~~ 270 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV----VV--GGLRPPIPKE 270 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH----Hh--cCCCCCCCcc
Confidence 434445578999999999999 668999999999999999999999999865442221111 11 1112222222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+..+..++.+||+.||++||++.+++..|+
T Consensus 271 ----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 271 ----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred ----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 4455889999999999999999999999886
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-49 Score=376.60 Aligned_cols=252 Identities=26% Similarity=0.416 Sum_probs=213.5
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-eeeEEEe
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-HSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 481 (673)
.+..+.||+|..|+||+++++ +++.+|+|.+... .++...+++.+|++++++.+||+||.++|.|..++ ...++||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 344578999999999999875 6899999999544 44556889999999999999999999999999988 5999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||++|||+++++..+ .+++....+|+.+|++||.|||+. ++|+||||||+|||++..|+|||||||.+..+...
T Consensus 159 YMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 999999999998763 488899999999999999999973 29999999999999999999999999999877543
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||... ........+.+..+.+...+..+.. .
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~---~~~~~~~~~Ll~~Iv~~ppP~lP~~--~ 306 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP---NPPYLDIFELLCAIVDEPPPRLPEG--E 306 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc---CCCCCCHHHHHHHHhcCCCCCCCcc--c
Confidence 557789999999999999999999999999999999999999998743 1111223344556666444433222 3
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++..++..||++||.+||+++|+++
T Consensus 307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 307 FSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 5667999999999999999999999975
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-48 Score=392.58 Aligned_cols=250 Identities=28% Similarity=0.470 Sum_probs=224.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|...+.||+|+|+.+|+++. .+|..||+|++.+.........+...+||++.++++|||||+++++|++.+.+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5689999999999999999977 789999999998877777777888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+|++|+|.++++++ +++++.++..++.||+.|+.|||++ +|+|||||..|+|++++.+|||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999854 5699999999999999999999999 9999999999999999999999999999999887
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.+...+.+|||.|.|||++....++..+||||+|||+|-|++|++||+... ..+....+.......|.
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--------vkety~~Ik~~~Y~~P~---- 239 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--------VKETYNKIKLNEYSMPS---- 239 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--------HHHHHHHHHhcCccccc----
Confidence 777788999999999999999999999999999999999999999998432 23344445555555543
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..++|.++|++||.+|||+++|+.
T Consensus 240 ~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 240 HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 33445889999999999999999999985
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-48 Score=375.72 Aligned_cols=255 Identities=26% Similarity=0.366 Sum_probs=218.1
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhH----HHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEIS----VQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+.|.+.+.+|+|+||.|-+|.. ++|+.||||++++......+ ......+|+++|+++.|||||++++++..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 35678889999999999999954 58999999999875443311 23446799999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEeccc
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFG 552 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg 552 (673)
.|+|+||++||.|.+.+-..+. +.+.....+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999987653 56677788999999999999999 99999999999999766 679999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
+|+... ......+.+||+.|.|||++.+.. +..++|+||+||++|-+++|.+||.... ......+++..
T Consensus 325 lAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~-------~~~sl~eQI~~ 396 (475)
T KOG0615|consen 325 LAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY-------TDPSLKEQILK 396 (475)
T ss_pred hhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc-------CCccHHHHHhc
Confidence 999876 345567789999999999998655 3348899999999999999999997321 11224566778
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+++.+.+..|...+.+..++|.+||..||++|||++|+++
T Consensus 397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 8888888899999999999999999999999999999985
No 7
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-47 Score=384.15 Aligned_cols=248 Identities=28% Similarity=0.468 Sum_probs=207.9
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+...+.||+|.||+||.|.+.....||+|.++..... ...|.+|+++|.+++|++||+++|+|..++..+||||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence 4456889999999999999988889999998765332 467889999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
+.|+|.++|+... ...+...+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+|||+|+....+...
T Consensus 284 ~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 284 PKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred ccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 9999999999732 35688899999999999999999999 9999999999999999999999999999955433322
Q ss_pred c-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--CCCCCCcch
Q 005864 564 W-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLPSRNI 639 (673)
Q Consensus 564 ~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 639 (673)
. ....-+..|.|||.+..+.++.|||||||||++|||+| |+.||......+ ..+.++. +++.|..
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e---------v~~~le~GyRlp~P~~-- 428 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE---------VLELLERGYRLPRPEG-- 428 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH---------HHHHHhccCcCCCCCC--
Confidence 1 22334578999999999999999999999999999999 999987543221 1122222 4454443
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
++.++++++..||+.+|++|||++.+...|+
T Consensus 429 --CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 429 --CPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred --CCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 4445999999999999999999999888775
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-48 Score=351.49 Aligned_cols=257 Identities=24% Similarity=0.333 Sum_probs=211.3
Q ss_pred CCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceee-eeecCCe-eeEE
Q 005864 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG-FCSHPRH-SFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~~-~~lv 479 (673)
.|++.++||+|.||+||++ ...+|..||.|.++-. ..+....+....|+.+|++++|||||++++ .+.++.. .++|
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4667789999999999999 5578999999999843 334556788999999999999999999998 4544444 8899
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCC-CeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFP-PIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
||||..|+|...++..+ ..+.+++..+++++.|+++||.++|.+... -|+||||||.|||++.+|.||++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999997543 235689999999999999999999995432 3789999999999999999999999999998
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..........+|||.||+||.+...+|+.||||||+||++|||+.-++||.+-+..+ .-..+-...++.-
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~--------L~~KI~qgd~~~~-- 248 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS--------LCKKIEQGDYPPL-- 248 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH--------HHHHHHcCCCCCC--
Confidence 877666778899999999999999999999999999999999999999998543221 1222333333311
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
....++..+.++|..|+..||+.||+...+++.
T Consensus 249 p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 249 PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred cHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 114566789999999999999999985555443
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-46 Score=358.51 Aligned_cols=201 Identities=31% Similarity=0.553 Sum_probs=181.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
..+|...+.||+|+||+||+|+++ ++..||||.+.+... ....++.+..|+.+|+.++|||||++++++..++..++|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 357888889999999999999875 589999999977543 334567789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC------CceEEecccc
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE------YEARVSDFGI 553 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~ 553 (673)
||||.||+|.++++..+ .+++..+...+.|+|.||++||++ +||||||||.|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999999875 488999999999999999999999 99999999999999865 4589999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|+.+.++ ......+|++-|||||++...+|+.|+|+||.|+|+||+++|+.||+.
T Consensus 162 AR~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 162 ARFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9988743 344668899999999999999999999999999999999999999983
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-46 Score=356.99 Aligned_cols=245 Identities=26% Similarity=0.382 Sum_probs=213.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.++||+|+||+||.++.+ +++.+|+|++++....+..+.+...+|..+|.+++||+||++.-.|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999665 5999999999988777777789999999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+.||.|..+|++.+ .+++..+.-++..|+.||.|||++ +||||||||+|||+|.+|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999998764 488999999999999999999999 999999999999999999999999999996655
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
........+||+.|||||++.+.+|+..+|.||+|+++|||++|.+||...+. ....+.+...+.+.++...
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--------~~~~~~I~~~k~~~~p~~l 249 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--------KKMYDKILKGKLPLPPGYL 249 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--------HHHHHHHhcCcCCCCCccC
Confidence 55555668999999999999999999999999999999999999999984322 2333444444544333322
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC
Q 005864 640 QDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
..+..+++.+.+..||++|.
T Consensus 250 ---s~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 250 ---SEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---CHHHHHHHHHHhccCHHHhc
Confidence 23578899999999999995
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.6e-45 Score=338.65 Aligned_cols=261 Identities=21% Similarity=0.351 Sum_probs=210.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+....+|+|+||.||+.+.+ +|+.||||++.... +++...+-..+|+++|++++|||+|.++.+|...+..++||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 35777889999999999999886 59999999997653 34556777899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+. ++.+-+.... ...+.....+++.|+++|+.|+|++ +++||||||+||+++.++.+|+||||+|+.+...
T Consensus 81 E~~dh-TvL~eLe~~p--~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYP--NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eecch-HHHHHHHhcc--CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 99998 5555555443 3477788999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc----------------cc
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN----------------LS 623 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----------------~~ 623 (673)
...++..+.|.+|+|||.+.+ .+|++.+||||.||++.||++|.+-|.+.+..++...... ..
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 777888999999999999887 7899999999999999999999998876555433221110 00
Q ss_pred cccccCCCCCCC---CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.-+.-|....+ ....+....-+.++++.|++.||.+|++-+|++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111111111111 1122233456889999999999999999999874
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-46 Score=382.64 Aligned_cols=270 Identities=27% Similarity=0.470 Sum_probs=222.5
Q ss_pred eeeccCcccHHHHHHHhcCC---------CccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHH
Q 005864 385 ILTFEGKIVYEEIIRATKNF---------DAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNE 451 (673)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~---------~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e 451 (673)
..++....+||+-.+|...| .+.++||.|.||+||+|+++- ...||||.++... .+..+.+|..|
T Consensus 603 ~k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~E 680 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSE 680 (996)
T ss_pred ceeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhh
Confidence 34444556676665554433 467899999999999998752 3469999998764 34468899999
Q ss_pred HHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 005864 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHR 531 (673)
Q Consensus 452 ~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 531 (673)
+.+|.+++||||+++.|+.......++|+|||++|+|+.+|+.+. .++++.+...++++||.||.||.+. ++|||
T Consensus 681 AsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm---~YVHR 755 (996)
T KOG0196|consen 681 ASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDM---NYVHR 755 (996)
T ss_pred hhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhc---Cchhh
Confidence 999999999999999999999999999999999999999999875 5699999999999999999999999 99999
Q ss_pred cCCCCCeEeCCCCceEEecccceeecCCCCCC-ceecc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCC
Q 005864 532 DISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-WTEFA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPR 607 (673)
Q Consensus 532 dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~ 607 (673)
||.++|||++.+..+||+|||+++.+.++... ++... -+.+|.|||.+..++++.+|||||||+++||.++ |..||
T Consensus 756 DLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 756 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred hhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 99999999999999999999999988655533 23232 3479999999999999999999999999999996 99998
Q ss_pred ccccccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 608 DFISLLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..... .+.+.++. +-+++.|- +++..+.+|+..||++|-.+||++.|++..|+|
T Consensus 836 WdmSN--------QdVIkaIe~gyRLPpPm----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 836 WDMSN--------QDVIKAIEQGYRLPPPM----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred cccch--------HHHHHHHHhccCCCCCC----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 74322 11222222 22445443 455679999999999999999999999999875
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-45 Score=386.18 Aligned_cols=255 Identities=24% Similarity=0.406 Sum_probs=210.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+....+.||+|+||+||+|+.. +..-||||.++.. .+.+.+++|.+|++++..++|||||+++|+|.+++.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 34455678999999999999653 3457999999876 344468999999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC-----------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS-----------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+++|+|||..|+|.++|..... ..+++..+.+.||.|||.||.||.++ .+|||||..+|+|+.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 9999999999999999976431 22388899999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCC-Cc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSS-NW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~-~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~ 621 (673)
.|||+|||+++.+-..+. .. ....-+++|||||.+..++|+++||||||||++||+++ |+.||..... +
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--------~ 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--------Q 712 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------H
Confidence 999999999986533221 11 12334689999999999999999999999999999998 9999875433 2
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+.-+-+.++- ......+.++++|+..||+..|++||+++|+-..|.
T Consensus 713 EVIe~i~~g~lL---~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 713 EVIECIRAGQLL---SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHHHcCCcc---cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 222233333331 233455667999999999999999999999998875
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3e-44 Score=361.32 Aligned_cols=263 Identities=25% Similarity=0.365 Sum_probs=214.4
Q ss_pred cHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec
Q 005864 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472 (673)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 472 (673)
..+++....+++.+.+.||+|.||+||+|+|. ..||||.+........ ..+.|+.|+.++++-||.||+-+.|||..
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 33566666677778899999999999999984 3689999987654443 68899999999999999999999999998
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
+.. .||+.+|+|.+|+.+++-.. ..|+..+.+.||+|||+||.|||.+ +|+|||||+.|||+.+++.|||+|||
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred Cce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEeccc
Confidence 877 99999999999999999765 6799999999999999999999999 99999999999999999999999999
Q ss_pred ceeecC--CCCCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 553 IAKFLK--PGSSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 553 ~~~~~~--~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
++..-. .+........|..-|||||++. ..+|+..+||||||+++|||++|..||. .+.. +..+..+
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~-------dqIifmV 605 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNR-------DQIIFMV 605 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCCh-------hheEEEe
Confidence 997432 2333445567888999999986 3468999999999999999999999987 2221 1112111
Q ss_pred cCCCCC-CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 628 LDPRLP-LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 628 ~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
-.+.+. .........+.++.+|+..||..++++||.+.+++..|+
T Consensus 606 GrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 606 GRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred cccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 122111 111222345567999999999999999999999999775
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-44 Score=354.74 Aligned_cols=251 Identities=24% Similarity=0.389 Sum_probs=219.5
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
..+|.+++.||.|+|++||+|+. .+++.||||++.+.....+...+.+..|-.+|.++ .||.|++++-.|+++...|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 46789999999999999999965 46999999999877666666677888999999999 89999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++|+|.+++++.+ .|++..+..++.+|..|++|||+. |||||||||+|||+|+|++++|.|||.|+.+.
T Consensus 152 vLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999875 489999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCC-------------ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 559 PGSSN-------------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 559 ~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
+.... ...++||-.|.+||.+.....+..+|+|+||||+|+|+.|++||...+ ....+.
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N--------eyliFq 297 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN--------EYLIFQ 297 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc--------HHHHHH
Confidence 42211 144789999999999999999999999999999999999999997432 233456
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++++-.+.++.... ..+.+|+.+.|..||.+|+|.+|+.+
T Consensus 298 kI~~l~y~fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 298 KIQALDYEFPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHhcccCCCCCC----HHHHHHHHHHHccCccccccHHHHhh
Confidence 66666666665444 45889999999999999999999865
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-43 Score=341.30 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=211.6
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.|++.+.||.|..++||+|+ .+.++.||||++.-..... ..+.+.+|+..|+.++||||++++..|..++..|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 4679999999999999999995 4678999999997765443 378899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|+||.+||+.++++..-. ..+++..+..|.+++++||.|||++ |.+|||+|+.|||++++|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred ehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 999999999999987654 3489999999999999999999999 999999999999999999999999998876643
Q ss_pred CCCCc----eecccccccccccccc--cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 560 GSSNW----TEFAGTFGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 560 ~~~~~----~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... ....|++.|||||++. -..|+.|+||||||++..|+.+|..||....+....-........... ...
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~--t~~ 256 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL--TSG 256 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc--ccc
Confidence 32221 4468999999999954 346999999999999999999999999866554321111110000000 001
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.+.......++.+++..||.+||.+|||++++++
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 112223344567999999999999999999999874
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-43 Score=348.55 Aligned_cols=261 Identities=26% Similarity=0.382 Sum_probs=209.3
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 478 (673)
+.|+..++||+|.||.||+|+. .+|+.||+|++..... ++.......+||.+|++++||||+++.+...+. ...|+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 4466678899999999999955 6799999999976543 334567788999999999999999999999876 68999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||||+. +|.-++...+ -.|++.++..+++|++.||+|||++ +|+|||||.+|||+|.+|.+||+|||+|+++.
T Consensus 196 VFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999999 9999887754 5699999999999999999999999 99999999999999999999999999999887
Q ss_pred CCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccc----
Q 005864 559 PGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLN---- 625 (673)
Q Consensus 559 ~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~---- 625 (673)
.... ..+..+.|.+|+|||.+.+. .|+.++|+||.|||+.||++|++.|.+-..+++.. ...+..|.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 6544 46778899999999998764 69999999999999999999999987544433211 11111111
Q ss_pred ---cccCCCCCCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 ---EILDPRLPLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ---~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..+... +.....+....+|+..+|..||.+|.|+.++++
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11111111000 111223456889999999999999999999875
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3e-43 Score=319.70 Aligned_cols=262 Identities=23% Similarity=0.309 Sum_probs=211.7
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|...+.+|+|.||.||+|++ .+|+.||||+++.....+ .......+|++.|+.++|+||+.++++|...+..-+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 3577889999999999999955 579999999998764332 23456789999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+. +|...++... ..++-..+..++.++++|++|||++ .|+||||||.|++++++|.+||+|||+|+.+.+.
T Consensus 81 Efm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred Eeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 99987 9999998764 5688899999999999999999999 9999999999999999999999999999999877
Q ss_pred CCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccccccc------
Q 005864 561 SSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNE------ 626 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~------ 626 (673)
.......+.|.+|+|||.+.+. .|+..+||||.|||+.||+.|.+-|.+.+..++.... ....+.+
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 7766666889999999988764 5999999999999999999988877655444331111 1111111
Q ss_pred ccC-CCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 627 ILD-PRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 627 ~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
... ...+.+. ......+.+..+++..++..||.+|.|++|++++
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 000 0111111 1233445567999999999999999999999864
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-43 Score=354.27 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=214.7
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|+....||+|+.|.||.|. ..+++.||||++...... ..+-+.+|+.+|+..+|+|||++++.|...+..|+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 3567788899999999999994 457899999999764332 356788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||+||+|.|.+... .+++.++..|+.++++||+|||.+ +|+|||||..||+++.+|.+||+|||++..+..
T Consensus 349 MEym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EeecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 9999999999999875 389999999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
........+||+.|||||++....|++|+||||||++++||+.|++||-....+...+ .+...-.+++. ..
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly-----LIa~ng~P~lk----~~ 492 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----LIATNGTPKLK----NP 492 (550)
T ss_pred ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH-----HHhhcCCCCcC----Cc
Confidence 7777888999999999999999999999999999999999999999986433332211 11111122222 33
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||..||.+||++.|+++
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 455677999999999999999999999986
No 20
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=320.79 Aligned_cols=239 Identities=24% Similarity=0.330 Sum_probs=213.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.+|.|+||.|..++.+ +|..+|+|++.+...-.....+....|..+|+.+.||+++++.+.|.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46888899999999999999876 58899999998877777777888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++||.|.+++++.+ .+++..+..+|.||+.|++|||+. +|++|||||+|||+|.+|.+||.|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 9999999999999875 489999999999999999999999 9999999999999999999999999999987532
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.-..+|||.|+|||.+.+.++..++|.|||||++|||+.|.+||..... ....+.++..+..+|.-...
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~fP~~fs~ 266 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVKFPSYFSS 266 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcccCCcccCH
Confidence 4568999999999999999999999999999999999999999974322 34456677777777654433
Q ss_pred HHHHHHHHHHHHcccCCCCCC
Q 005864 641 DKLISILEVALLCLEESPESR 661 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~R 661 (673)
++.+|+.+.++.|-.+|
T Consensus 267 ----~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 267 ----DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ----HHHHHHHHHHhhhhHhh
Confidence 48899999999999888
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-43 Score=345.13 Aligned_cols=261 Identities=22% Similarity=0.328 Sum_probs=211.5
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCC-eee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPR-HSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~ 477 (673)
.++|.+.+.||.|.||+||+|+- .+|..||||+++...... +.-.-.+|+..|+++. |||||++.+++.+.+ ..+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~--ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH--HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 35688889999999999999954 579999999998754432 2233468999999998 999999999998877 999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||||+. +|+++++.++ +.|++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+-+
T Consensus 87 fVfE~Md~-NLYqLmK~R~--r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeHHhhhh-hHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 99999987 9999999873 7899999999999999999999999 9999999999999999889999999999977
Q ss_pred CCCCCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cc------c
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NL------S 623 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~------~ 623 (673)
.. ...++..+.|.+|+|||++. .+.|+.+.|+||+|||++|+.+-++-|.+.+..++..... .. .
T Consensus 161 ~S-kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 161 RS-KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cc-CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 53 45567889999999999865 6779999999999999999999999887665554322211 11 1
Q ss_pred cccccCCCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 624 LNEILDPRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 624 ~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+...+.-+++.-. ......+.+..+++.+|++.||.+|||++|+++.
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1112222222111 1122355679999999999999999999999863
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.2e-43 Score=348.81 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=213.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+.... +.+.+.+.+|++++++++|||||.++++|....+.++|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 46788889999999999999665 6889999999776444 345788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+.| +|..++...+ .++++.+..++.|+..||.|||+. +|.|||+||+||+++.++.+|+||||+|+.+...
T Consensus 81 e~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 99988 9999998875 488999999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
....+...|||-|||||...+.+|+..+|.||+|||+||+++|++||...+. ......+.......| .
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si--------~~Lv~~I~~d~v~~p----~ 221 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI--------TQLVKSILKDPVKPP----S 221 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH--------HHHHHHHhcCCCCCc----c
Confidence 7777888999999999999999999999999999999999999999863211 111222222222222 2
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+..++...+.+||.+|-|..+++.
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 45566889999999999999999988764
No 23
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=340.38 Aligned_cols=251 Identities=26% Similarity=0.401 Sum_probs=200.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC--eeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR--HSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 478 (673)
.++...+.||+|+||+||++... +|...|||.+..... ...+.+.+|+.+|.+++|||||+.+|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 34667789999999999999765 499999998865411 12677899999999999999999999854444 6889
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeec
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFL 557 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~ 557 (673)
.|||+++|+|.+++...+. .+++..+..+.+||++||+|||++ +|+||||||+|||++. ++.+||+|||++...
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999998763 589999999999999999999999 9999999999999999 799999999999876
Q ss_pred CCCC---CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccc-ccccccccccccccccccCCCC
Q 005864 558 KPGS---SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFI-SLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 558 ~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
.... .......||+.|||||++..+ ....++||||+||++.||+||+.||... ... ............
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~-------~~~~~ig~~~~~ 241 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA-------EALLLIGREDSL 241 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH-------HHHHHHhccCCC
Confidence 5311 123457899999999999853 3445999999999999999999998742 110 001111111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+ ......+.+..+++.+|+..||++||||+++++.
T Consensus 242 P---~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 242 P---EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred C---CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 1 1122344568899999999999999999999863
No 24
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-42 Score=376.09 Aligned_cols=255 Identities=27% Similarity=0.414 Sum_probs=208.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
...+..+.||+|.||.||+|... +|. .||||.+... .+.....+|.+|..+|+.++|||||+++|+|.+...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 44566788999999999999664 343 4899988765 445568999999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 476 SFLVYECLERGSLAEILSNDGS----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
.++++|||++|+|..+|++.+. ...++....+.++.|||+|+.||+++ ++|||||.++|+|+++...|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 9999999999999999988632 34588899999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCC-Cceec-ccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc
Q 005864 552 GIAKFLKPGSS-NWTEF-AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 552 g~~~~~~~~~~-~~~~~-~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
|+|+.+-.... ..... .-+..|||||.+..+.+++|+|||||||++||++| |..||......+. ...-.-
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-------~~~~~~ 919 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-------LLDVLE 919 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-------HHHHHh
Confidence 99994432222 11112 23468999999999999999999999999999998 9999874432221 111222
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 629 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.++++.|..+. ..+++++..||+.+|++||++..+++.++
T Consensus 920 ggRL~~P~~CP----~~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 920 GGRLDPPSYCP----EKLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred CCccCCCCCCC----hHHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 34666554443 34889999999999999999999998775
No 25
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-42 Score=349.75 Aligned_cols=253 Identities=23% Similarity=0.369 Sum_probs=212.3
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh-h-hHHHHHHHHHHHHHhccC-CCcccceeeeeecCCe
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS-E-ISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRH 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 475 (673)
..+.|.+.+.||+|.||+|+.|.+ .+|..||+|.+...... . ....+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 346799999999999999999965 47899999976653221 1 123456678999999998 9999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccce
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIA 554 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 554 (673)
.++||||+.||+|.+++...+ .+.+..+..+++|++.|++|||++ +|+||||||+|++++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999999853 477799999999999999999999 99999999999999999 99999999999
Q ss_pred eecCCCCCCceecccccccccccccccCC-cC-cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMK-VT-EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
..............|++.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.... ......+....+
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--------~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--------PNLYRKIRKGEF 240 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--------HHHHHHHhcCCc
Confidence 98753445567789999999999999877 75 789999999999999999999985221 122233555555
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..|.... +.++..++.+|+..||.+|+|+.++++
T Consensus 241 ~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 241 KIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred cCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 5554332 556899999999999999999999983
No 26
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=353.43 Aligned_cols=254 Identities=28% Similarity=0.435 Sum_probs=206.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC--C--CE-EEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS--G--EV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~--~--~~-vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++....+.||+|+||.||+|++.. + .. ||||..+..........++|.+|+++|+.++|||||+++|++..+.+.
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344455899999999999997643 3 23 899998864434456789999999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|||+|+||+|.++|++.+. .++..++..++.+.|.||+|||++ +++||||.++|+|++.++.+||+|||+++.
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999998753 588999999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--CCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--RLP 633 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 633 (673)
-...........-+..|+|||.+..+.++.++|||||||++||+++ |..||......+ ....+... +.+
T Consensus 312 ~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--------v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 312 GSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--------VKAKIVKNGYRMP 383 (474)
T ss_pred CcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--------HHHHHHhcCccCC
Confidence 3311111112235689999999999999999999999999999998 899987554321 11222111 222
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. ..+..+..++.+||..+|++||+|.++.+.++
T Consensus 384 ~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 384 IPS----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCC----CCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 222 33445888899999999999999999999875
No 27
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=345.71 Aligned_cols=246 Identities=31% Similarity=0.497 Sum_probs=202.9
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS 471 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 471 (673)
+.|++|.. .+.+|.|+.|.||+|++ .++.||||+++... ..+|+-|++++||||+.+.|+|.
T Consensus 121 iPFe~IsE-------LeWlGSGaQGAVF~Grl-~netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 121 IPFEEISE-------LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred CCHHHhhh-------hhhhccCcccceeeeec-cCceehhHHHhhhh----------hhhHHHHHhccCcceeeEeeeec
Confidence 45666654 47799999999999999 58899999875431 24789999999999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
..-.++||||||..|-|+.+|+..+ .+.-.....|..+||.||.|||.+ .|||||||+-|||++.+..|||+||
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred CCceeEEeeeccccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccc
Confidence 9999999999999999999999864 456677888999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|-++..... ...-.++||..|||||++.+.+.++|+||||||||||||+||..||...+-..... ..... .-.
T Consensus 257 GTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw----GVGsN--sL~ 329 (904)
T KOG4721|consen 257 GTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW----GVGSN--SLH 329 (904)
T ss_pred cchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE----eccCC--ccc
Confidence 999866443 34456889999999999999999999999999999999999999987543221110 00000 113
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
++.|..+.. .+.-|++.||+..|..||+++|++..|+
T Consensus 330 LpvPstcP~----GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 330 LPVPSTCPD----GFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCcccCch----HHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 444444433 4778899999999999999999998774
No 28
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-42 Score=341.60 Aligned_cols=260 Identities=23% Similarity=0.339 Sum_probs=209.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
....+++.||+|.||+|.......+..||||.++.... .....+|.+|+++|.+++|||||+++|+|..++..++|+|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 34567889999999999999988889999999987643 3457899999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||++|+|.+++.++.... .......+|+.|||.||+||.+. ++|||||.++|+|++.++++||+|||+++-+-.+.
T Consensus 616 YmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCC
Confidence 999999999998874322 45566778999999999999999 99999999999999999999999999998554333
Q ss_pred CC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccccccccccccccccccccCCCCC-CCC
Q 005864 562 SN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISLLSSSSSNMNLSLNEILDPRLP-LPS 636 (673)
Q Consensus 562 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 636 (673)
.. ....+-+++|||||.+..++++++||||+||+++||+++ ...||......+. .+...++++...+ ...
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-----ven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-----VENAGEFFRDQGRQVVL 766 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-----HHhhhhhcCCCCcceec
Confidence 22 233455789999999999999999999999999999986 8889874432211 1111122221111 000
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.-++..+++++.+||..|.++||+++++...|-
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 111233456889999999999999999999987763
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.4e-42 Score=353.52 Aligned_cols=257 Identities=23% Similarity=0.400 Sum_probs=202.4
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+.++..+ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 46789999999999999999964 235789999987542 223456789999999999 899999999998764
Q ss_pred -CeeeEEEecccCCChHHHHhcCCC-------------------------------------------------------
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGS------------------------------------------------------- 497 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 497 (673)
+..++||||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 457899999999999999975321
Q ss_pred ----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC--ceeccccc
Q 005864 498 ----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTF 571 (673)
Q Consensus 498 ----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~ 571 (673)
...+++..+..++.||++||+|||+. +|+||||||+||++++++.+||+|||+++........ .....++.
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 13478888999999999999999999 9999999999999999999999999999865332221 12234567
Q ss_pred ccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCCCcchHHHHHHHHHH
Q 005864 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPSRNIQDKLISILEV 649 (673)
Q Consensus 572 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l 649 (673)
.|+|||++.+..++.++|||||||++|||++ |..||......+. ......+.. ...+ ...+.++.++
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-------~~~~~~~~~~~~~~----~~~~~~l~~l 309 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-------FCQRLKDGTRMRAP----ENATPEIYRI 309 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-------HHHHHhcCCCCCCC----CCCCHHHHHH
Confidence 8999999999899999999999999999997 9999874322110 001111111 1111 1233468899
Q ss_pred HHHcccCCCCCCCCHHHHHHHhhC
Q 005864 650 ALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 650 i~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+||+.||++|||+.|+++.|++
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHHH
Confidence 999999999999999999999863
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=336.25 Aligned_cols=250 Identities=25% Similarity=0.410 Sum_probs=212.7
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|...+.||+|.||.||+|.+ ..++.||+|++.... ......++.+|+.++.+++++||.+++|.+..+...+++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 34577778999999999999965 579999999997653 334578899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||.||++.+.++... .+++..+.-|+.++..|+.|||.+ +.+|||||+.||++..+|.||++|||.+..+..
T Consensus 90 Mey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 99999999999998764 346777778899999999999999 999999999999999999999999999998877
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.......++||+.|||||++....|+.|+||||||++.+||.+|.+|+....+++... .+ ++-. |+...
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf---------lI-pk~~-PP~L~ 232 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF---------LI-PKSA-PPRLD 232 (467)
T ss_pred hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE---------ec-cCCC-CCccc
Confidence 6666678999999999999998899999999999999999999999988655432211 11 1111 11222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++..|+++||+.||++.++++
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 255567999999999999999999999985
No 31
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-42 Score=306.67 Aligned_cols=250 Identities=28% Similarity=0.416 Sum_probs=216.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++++.||+|.||.||.|+.+ ++-.||+|++.+..........++.+|+++-+.++||||++++++|.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 57999999999999999999765 67889999998776666666788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||..+|++...|..... ..+++.....+..|+|.|+.|+|.. +++||||||+|+|++.++..|++|||.+....
T Consensus 102 Eya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999986543 5688899999999999999999999 99999999999999999999999999987543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.......+||..|.|||...+..++..+|+|++|++.||++.|..||.... ..+...++..-++..|.
T Consensus 176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--------~~etYkrI~k~~~~~p~---- 243 (281)
T KOG0580|consen 176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--------HSETYKRIRKVDLKFPS---- 243 (281)
T ss_pred CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--------hHHHHHHHHHccccCCc----
Confidence 455677899999999999999999999999999999999999999998433 22333444444444432
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+....++|.+|+..+|.+|.+..|+++
T Consensus 244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 244 TISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ccChhHHHHHHHHhccCccccccHHHHhh
Confidence 33445889999999999999999999986
No 32
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=338.85 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=210.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|+...+||+|+||+||.|+-+ +|..+|+|++++...-...+.+....|-.+|...++|+||+++-.|++.+..|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 468999999999999999999665 6999999999998877788889999999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||++||++..+|...+ .+++..+..++.+++-|+..+|+. |++||||||+|+|+|..|++||+|||++.-...
T Consensus 220 MEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999998764 588899999999999999999999 999999999999999999999999999853211
Q ss_pred -----------------------CCCC------------------------ceecccccccccccccccCCcCcchhHHH
Q 005864 560 -----------------------GSSN------------------------WTEFAGTFGYVAPELAYTMKVTEKCDVYS 592 (673)
Q Consensus 560 -----------------------~~~~------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 592 (673)
+... ....+|||.|+|||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0000 01245999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccccccccccccccccccccCCC--CCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHH
Q 005864 593 FGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR--LPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTV 667 (673)
Q Consensus 593 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v 667 (673)
+|||+|||+.|.+||....+ .+....++.-+ +.+|.+ .....+..++|.+|+. ||++|-- ++||
T Consensus 374 LG~ImyEmLvGyPPF~s~tp--------~~T~rkI~nwr~~l~fP~~--~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETP--------QETYRKIVNWRETLKFPEE--VDLSDEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHHhhhccCCCc--CcccHHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 99999999999999984333 23333333333 333332 2333678899999999 9999964 5555
Q ss_pred H
Q 005864 668 C 668 (673)
Q Consensus 668 ~ 668 (673)
.
T Consensus 443 K 443 (550)
T KOG0605|consen 443 K 443 (550)
T ss_pred h
Confidence 3
No 33
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=306.09 Aligned_cols=260 Identities=22% Similarity=0.287 Sum_probs=212.2
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|.+.+.+|+|||+-||.++ ..+++.||+|++.... .+..+...+|++..++++|||++++++++..+ .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4679999999999999999996 5678999999987654 33577889999999999999999999998543 3
Q ss_pred eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 475 HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
..|++++|+..|||.+.+.... ....+++.+.+.|+.+|++||.+||+... +++||||||.||++.+++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccC
Confidence 5899999999999999998654 33478999999999999999999999843 599999999999999999999999999
Q ss_pred eeecCCCCC---------Cceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc
Q 005864 554 AKFLKPGSS---------NWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 554 ~~~~~~~~~---------~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 621 (673)
+....-.-. .+..-..|..|+|||.+. +...++++|||||||++|+|+.|..||+..-. . ..
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--~----Gg 249 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--Q----GG 249 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh--c----CC
Confidence 986532111 122345789999999875 45578999999999999999999999985422 1 11
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...-++..+.+.+|.+.. ++..+.+++++|++.||.+||++.+++..++
T Consensus 250 SlaLAv~n~q~s~P~~~~--yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 250 SLALAVQNAQISIPNSSR--YSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred eEEEeeeccccccCCCCC--ccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 222344455555554332 6778999999999999999999999998875
No 34
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.9e-41 Score=344.59 Aligned_cols=244 Identities=21% Similarity=0.241 Sum_probs=201.6
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+|+.. +|+.||+|+++............+.+|+.++.+++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999764 78999999997654444445667889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCcee
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 566 (673)
+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 9999997653 578899999999999999999999 9999999999999999999999999998754333333445
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
..|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~~ 222 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPR----TLSPEA 222 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHHH
Confidence 67999999999999999999999999999999999999998632211 111112222222222 234458
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 647 LEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+++.+||+.||++|| ++.++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 8999999999999999 7888874
No 35
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.7e-41 Score=338.71 Aligned_cols=254 Identities=22% Similarity=0.273 Sum_probs=203.7
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|.. .+|+.||+|.+.............+.+|+.++..++|+||+++++++.+++..++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377789999999999999976 5799999999876543433345568899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999988865432 3588999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ .......+.......+ ..
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~----~~ 227 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRVKEDQEEYS----EK 227 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHhhcccccCC----cc
Confidence 22345789999999999999999999999999999999999999974321100 0000111111111111 22
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+.++.+++.+||+.||++||+ ++++++
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 3456889999999999999997 788775
No 36
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-41 Score=337.20 Aligned_cols=245 Identities=23% Similarity=0.351 Sum_probs=200.1
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CCeeeEEEec
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PRHSFLVYEC 482 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 482 (673)
...||+|++|.||+|.+ +|+.||||+++..........+.+.+|+.++.+++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 799999999976544444446788999999999999999999999876 3467899999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++... ..+++..+.+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999999865 35889999999999999999999742 77899999999999999999999999998653321
Q ss_pred Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc--CCCCCCCCcc
Q 005864 563 NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL--DPRLPLPSRN 638 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 638 (673)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+ ....+. ..+.+.+.
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~-- 245 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--------IYDLIINKNNSLKLPL-- 245 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhcCCCCCCCC--
Confidence 23457889999999876 678999999999999999999999997432211 111111 11222221
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++|||++|+++.|+
T Consensus 246 --~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 246 --DCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred --cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 23456899999999999999999999999886
No 37
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.4e-40 Score=339.55 Aligned_cols=262 Identities=22% Similarity=0.340 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-----------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCccc
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-----------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 464 (673)
++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ......++.+|+.++.+++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence 568889999999999999997532 3369999987542 233467799999999999999999
Q ss_pred ceeeeeecCCeeeEEEecccCCChHHHHhcCC----------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 005864 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDG----------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528 (673)
Q Consensus 465 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 528 (673)
++++++.+.+..++||||+++|+|.+++.... ....+++..+.+++.|++.||+|||+. +|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 99999999999999999999999999986532 113478889999999999999999999 99
Q ss_pred EEecCCCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CC
Q 005864 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GK 604 (673)
Q Consensus 529 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~ 604 (673)
+||||||+||++++++.+||+|||+++........ .....++..|+|||++.++.++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999866433221 122345778999999988899999999999999999997 56
Q ss_pred CCCccccccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 605 HPRDFISLLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 605 ~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.||......+..... ........ ......+ ...+..+.+++.+||+.||++|||+.||.+.|++
T Consensus 240 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDEQVIENA-GEFFRDQGRQVYLFRP----PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHHHHHHHH-HHHhhhccccccccCC----CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 676533221110000 00000000 0000111 1223468999999999999999999999999874
No 38
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.3e-41 Score=339.33 Aligned_cols=247 Identities=23% Similarity=0.300 Sum_probs=204.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999775 68999999987543333344667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997653 478889999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+..
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~--- 220 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--------GIYEKILAGKLEFPRH--- 220 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCcCCCcc---
Confidence 22356899999999999888999999999999999999999998743221 1122222333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
....+.+++.+||+.||.+||+ ++|+++
T Consensus 221 -~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 221 -LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred -CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 2345889999999999999995 888764
No 39
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-41 Score=340.81 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=218.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe-eeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH-SFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv 479 (673)
++|..++++|+|+||.++..+++ +++.|++|.+......+. ..+...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 57889999999999999999775 688999999877655443 35578899999999999999999999999888 8999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|+|++||++.+.+.+.+ ...++++.+..|+.|++.|+.|||++ .|+|||||+.|||++.++.|||+|||+|+.+.+
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999998875 46799999999999999999999998 999999999999999999999999999999988
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........||+.|++||.+.+.+|..|+||||+||++|||++-+++|...+. .....++....+.. ..
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~~~~P---lp 227 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRGLYSP---LP 227 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhccCCC---CC
Confidence 77677889999999999999999999999999999999999999999984322 22233333333221 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..++.++..++..|+..+|..||++.+++.+
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 3455679999999999999999999999864
No 40
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=343.19 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=205.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|+.. +|+.||+|.+...........+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999775 68999999987654334445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999998653 478888899999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
. ....|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+..
T Consensus 172 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~~~p~~--- 237 (329)
T PTZ00263 172 T---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--------RIYEKILAGRLKFPNW--- 237 (329)
T ss_pred c---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcCCcCCCCC---
Confidence 2 2357899999999999999999999999999999999999998643221 1112223333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+..+.+++.+||+.||.+||+ ++++++
T Consensus 238 -~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 238 -FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred -CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 2335789999999999999997 677763
No 41
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-41 Score=341.27 Aligned_cols=249 Identities=23% Similarity=0.362 Sum_probs=216.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+-|++++.||.|+.|.|-.|++ .+|+.+|||++.+...-.......+.+|+.+|+-+.||||++++++|.+..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3467889999999999999966 579999999998764444455677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|-|.+++-..+ ++++.++.+.+.||..|+.|+|.. +|+|||+||+|+++|..+++||+|||+|.... +
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-P 164 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-C
Confidence 9999999999998875 488899999999999999999999 99999999999999999999999999998654 3
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
+....+.+|++.|.|||++.+.+| +.++||||.|||||.|+||+.||++ .+....+.++..+.+..|.
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--------dNir~LLlKV~~G~f~MPs--- 233 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD--------DNIRVLLLKVQRGVFEMPS--- 233 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC--------ccHHHHHHHHHcCcccCCC---
Confidence 455567899999999999999998 4699999999999999999999983 2333445555566666653
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..+|+.+|+..||++|-|++||.+
T Consensus 234 -~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 234 -NISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred -cCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 34456899999999999999999999986
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.1e-41 Score=315.91 Aligned_cols=261 Identities=21% Similarity=0.252 Sum_probs=206.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee--cCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS--HPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 478 (673)
++|+..+.|++|.||.||+|+++ +++.||+|+++..... ....-.-.+||.++.+++|||||.+..+.. +-+..|+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek-~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK-EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccccc-CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 45777899999999999999775 7999999999876422 223345678999999999999999998875 3467999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||||+. +|.+++..-+ .++...++..++.|+++|++|||++ .|+|||||++|++++..|.+||+|||+|+.+.
T Consensus 155 VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999998 9999998765 5688999999999999999999999 99999999999999999999999999999998
Q ss_pred CCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccccccCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNEILDP 630 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~ 630 (673)
......+..+.|.+|+|||.+.+. .|+++.|+||+|||+.||+++++-|.+.+..++.... .+..+..+-..
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 777778888999999999988765 5899999999999999999999988765444321111 01111100000
Q ss_pred ----CCCC---CCc----chHH--HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 631 ----RLPL---PSR----NIQD--KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 631 ----~~~~---~~~----~~~~--~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+ +.. .... ....-.+++..++..||.+|.|+.|.++
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0000 000 0011 2245778999999999999999999875
No 43
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-41 Score=324.44 Aligned_cols=248 Identities=21% Similarity=0.353 Sum_probs=215.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.+|+|.||.|-+|.. ..|+.||||.+++....++...-.+.+|+++|..++||||+.++.+|...+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4678889999999999999955 789999999999988888888888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||..+|.|+|++.+++ .+++.++..++.||..|+.|+|.+ +++|||||.+||++|+++++||+|||++..+..
T Consensus 133 EYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 133 EYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 9999999999999875 489999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
......++|++-|.+||++.+.+| ++.+|-||+||++|-++.|..||++-+. .....++-.+.+..|.
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs~GaYrEP~--- 274 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQISRGAYREPE--- 274 (668)
T ss_pred ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------HHHHHHhhcccccCCC---
Confidence 345567899999999999999988 5789999999999999999999995433 1223333344443332
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+....-+|.+||..+|++|.|+.+|..
T Consensus 275 --~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 275 --TPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred --CCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 1223667899999999999999999864
No 44
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=310.13 Aligned_cols=253 Identities=24% Similarity=0.358 Sum_probs=220.9
Q ss_pred hcCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++.|++.+.||+|.|+.||+. ..++|+.+|+|++........ ..+++.+|+.+-+.++|||||++.+...+.+..|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 456888899999999999998 456899999998865544332 567889999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 556 (673)
||+|.|++|..-+-.+ ..+++..+-..++||++|+.|+|.+ +|||||+||+|+++... .-+|++|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999998766544 4578888889999999999999999 99999999999999543 4599999999998
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
+. +...+...+|||+|||||++...+|+..+|||+.|||+|-++.|..||... ..+...+.++.+....++
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--------~~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--------DQHRLYEQIKAGAYDYPS 233 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc--------cHHHHHHHHhccccCCCC
Confidence 87 666778899999999999999999999999999999999999999999742 233445667777777777
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..|....++..+++.+||..||.+|-|+.|.++
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 788888899999999999999999999999874
No 45
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-40 Score=340.36 Aligned_cols=241 Identities=23% Similarity=0.291 Sum_probs=198.3
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||.||+|... +++.||+|++.............+.+|+.++.+++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999765 5889999998765434444567788999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99997653 478899999999999999999999 999999999999999999999999999976433333334567
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.++.+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~ 222 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--------EMYRKILQEPLRFPD----GFDRDAKD 222 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCCCCC----cCCHHHHH
Confidence 899999999999999999999999999999999999998743221 111222222222222 23346889
Q ss_pred HHHHcccCCCCCCCC---HHHHH
Q 005864 649 VALLCLEESPESRPT---MQTVC 668 (673)
Q Consensus 649 li~~cl~~dp~~Rps---~~~v~ 668 (673)
++.+||+.||++||+ +.|++
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHH
Confidence 999999999999985 55554
No 46
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.6e-40 Score=339.55 Aligned_cols=244 Identities=21% Similarity=0.244 Sum_probs=200.5
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+++.. +|+.||+|.+.............+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999764 69999999997654444445667888999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCcee
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 566 (673)
+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++............
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 9999987653 578999999999999999999999 9999999999999999999999999998754333333344
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
..|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~~ 222 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEIRFPR----TLSPEA 222 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCHHH
Confidence 67899999999999989999999999999999999999998643221 111122222222222 223458
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 647 LEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+++.+||+.||++|| ++.++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 8999999999999998 8888764
No 47
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-41 Score=343.53 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=210.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|...++||+|.||+|++|..+ +++.+|||.+++...-..++.+..+.|..++... +||.+++++..|++.++.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 467999999999999999999776 5889999999998777777788899999999888 59999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+.||++..+.+. ..+++..+.-+|..|+.||.|||++ +||+||||.+||++|.+|.+||+|||+++---
T Consensus 447 vmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999996655543 3599999999999999999999999 99999999999999999999999999998644
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
......+++.||+.|||||++.+..|+.++|.|||||++|||+.|+.||... ..++..+.++..... +
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd--------dEee~FdsI~~d~~~----y 587 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD--------DEEEVFDSIVNDEVR----Y 587 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHhcCCCC----C
Confidence 3344567799999999999999999999999999999999999999999732 223334444433333 3
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
+...+.+...++.+++.++|++|.-+
T Consensus 588 P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 588 PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCcccHHHHHHHHHHhccCcccccCC
Confidence 34555678899999999999999865
No 48
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4e-40 Score=338.82 Aligned_cols=244 Identities=22% Similarity=0.254 Sum_probs=201.0
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+++.. +|+.||+|++.............+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999764 68999999997654444455678889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCcee
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 566 (673)
+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 999998765 3588899999999999999999999 9999999999999999999999999998754333333345
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
..|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~~ 222 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEDIKFPR----TLSADA 222 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhccCCccCCC----CCCHHH
Confidence 67899999999999889999999999999999999999998643221 111111222222222 223458
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 647 LEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+++.+||+.||++|| ++.|+++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 8999999999999997 8898875
No 49
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.5e-40 Score=345.15 Aligned_cols=258 Identities=21% Similarity=0.361 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||.||+|.+ .++..||||+++... .....+.+.+|+.++..+ +||||++++++|..+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45688999999999999999963 246689999986542 223456788999999999 899999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
+..++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999999965321
Q ss_pred ----------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 498 ----------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 498 ----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
...+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 12478889999999999999999999 99999999999999999999999999998764332
Q ss_pred CC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 562 SN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 562 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. .....++..|+|||.+.+..++.++|||||||++|||++ |..||....... ...+.+........
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--------~~~~~~~~~~~~~~-- 338 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--------KFYKMIKEGYRMLS-- 338 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--------HHHHHHHhCccCCC--
Confidence 21 112334567999999999999999999999999999998 888986432110 00111111111000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.++.+++.+||+.||++|||++|+++.|++
T Consensus 339 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 339 PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 01123468899999999999999999999999974
No 50
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=340.34 Aligned_cols=247 Identities=23% Similarity=0.291 Sum_probs=204.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCC--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||.||+|.... +..||+|++...........+.+.+|+.++..++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468899999999999999997543 468999998765443444567788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999998653 478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 184 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~p~~-- 250 (340)
T PTZ00426 184 R---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEGIIYFPKF-- 250 (340)
T ss_pred C---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcCCCCCCCC--
Confidence 2 23457899999999999888999999999999999999999999743221 1112222222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+..+.+++.+|++.||++|+ +++++++
T Consensus 251 --~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 251 --LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred --CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 223478999999999999995 8988875
No 51
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.2e-40 Score=342.16 Aligned_cols=256 Identities=20% Similarity=0.270 Sum_probs=206.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+..|++++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999775 58999999997654444445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997653 478899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......|++.|+|||++.+..++.++||||+||++|||++|+.||......+...... .....+.. +.......
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~~~--~~~~~~~~ 227 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK--YWKETLQR--PVYDDPRF 227 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH--hccccccC--CCCCcccc
Confidence 2344578999999999999899999999999999999999999997433211100000 00000100 00000001
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+.++.+++.+||..+|.+||+++|+++.
T Consensus 228 ~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 234568899999999999999999999863
No 52
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.3e-40 Score=344.89 Aligned_cols=258 Identities=23% Similarity=0.378 Sum_probs=203.2
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||.||+|.+ .++..||+|+++..... .....+.+|+.+++.+ +|||||+++++|...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 45789999999999999999864 23457999998754322 2356788999999999 899999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
+..++||||+++|+|.+++.....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999999999864310
Q ss_pred -----------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC--c
Q 005864 498 -----------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--W 564 (673)
Q Consensus 498 -----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~ 564 (673)
...+++.++.+++.||+.||+|||+. +++||||||+||++++++.+||+|||+++........ .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 12478889999999999999999999 9999999999999999999999999999865433221 1
Q ss_pred eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
....++..|+|||++.+..++.++|||||||++|||++ |+.||....... ............. .....+
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--------~~~~~~~~~~~~~--~~~~~~ 341 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--------KFYKMVKRGYQMS--RPDFAP 341 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--------HHHHHHHcccCcc--CCCCCC
Confidence 12234568999999998899999999999999999997 999987432111 0111111111110 001123
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 644 ISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.++.+++.+||+.||++|||+.+++++|++
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 568999999999999999999999999874
No 53
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1e-39 Score=326.30 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=203.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||.||+|.++ .+..||+|.++.... ....+.+.+|+.++.+++||||+++++++..++..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 46888999999999999999653 366899999876432 234567999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+...
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999999997653 3588999999999999999999999 9999999999999999999999999987653
Q ss_pred CCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCC
Q 005864 558 KPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPL 634 (673)
Q Consensus 558 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 634 (673)
...... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||......+ ....+.+. ..+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 229 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--------VIKAVEDGFRLPA 229 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHHCCCCCCC
Confidence 222111 112234578999999999999999999999999999875 999987432211 01111111 1121
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+ ...+..+.+++.+||+.+|.+||+++|+.+.|++
T Consensus 230 ~----~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 230 P----RNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred C----CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 2 2234568899999999999999999999999864
No 54
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-39 Score=335.51 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=197.9
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHH---hccCCCcccceeeeeecCCeeeEE
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKAL---TEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
|++.+.||+|+||.||+|... +|+.||||+++..........+.+.+|+.++ ..++||||+++++++..++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667899999999999999764 6899999999765433333455666666554 567899999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|..+++.. .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999888653 489999999999999999999999 999999999999999999999999999875433
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+.
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~p~--- 222 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDEVRYPR--- 222 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC---
Confidence 333344567899999999999989999999999999999999999998743221 111122222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
..+..+.+++.+||+.||.+|| ++.++++
T Consensus 223 -~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 223 -FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 2234588999999999999999 5666654
No 55
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.2e-39 Score=334.93 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=199.2
Q ss_pred ceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+.||+|+||.||+++. .+++.||+|.++..... .......+..|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999965 35889999998764322 223345678899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++...+ .+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999997653 467788888999999999999999 999999999999999999999999999976543333
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+.. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--------~~~~~~~~~~~~~~~~----~ 223 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--------KTIDKILKGKLNLPPY----L 223 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCC----C
Confidence 334467899999999999888999999999999999999999999743221 1222233333333322 2
Q ss_pred HHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 643 LISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+.++.+++.+||+.||++|| +++++++
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 34588999999999999999 7888764
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.6e-40 Score=337.81 Aligned_cols=244 Identities=21% Similarity=0.249 Sum_probs=200.2
Q ss_pred ceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||++.. .+|+.||+|.+.............+..|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999976 478999999997654444445667888999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 999998765 358899999999999999999997 6 999999999999999999999999999876443333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+.. .+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~~~~~~~p~~----~~~~ 222 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPRT----LSPE 222 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------HHHHHHhcCCCCCCCC----CCHH
Confidence 567999999999999989999999999999999999999998643211 1111122222222222 2345
Q ss_pred HHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 646 ILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+.+++.+||+.||++|+ ++.++++
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 88999999999999996 8998875
No 57
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-39 Score=328.36 Aligned_cols=249 Identities=23% Similarity=0.268 Sum_probs=199.9
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||+||++... +|+.||+|.+...........+.+..|+++++.++||||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999764 6899999998765444333456778899999999999999999999999999999999999999
Q ss_pred HHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceec
Q 005864 489 AEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEF 567 (673)
Q Consensus 489 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 567 (673)
.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 98885432 234689999999999999999999999 99999999999999999999999999998765544444456
Q ss_pred ccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHH
Q 005864 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISIL 647 (673)
Q Consensus 568 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 647 (673)
.|++.|+|||++.+..++.++||||||+++|||++|+.||........ .......+....... ....+..+.
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~ 229 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRILNDSVTY----PDKFSPASK 229 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh----HHHHHHhhcccCCCC----cccCCHHHH
Confidence 789999999999999999999999999999999999999863221100 001111111211121 123445688
Q ss_pred HHHHHcccCCCCCCC-----CHHHHHH
Q 005864 648 EVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 648 ~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+++.+||+.||++|| +++++++
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 230 SFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 999999999999999 6777764
No 58
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.7e-39 Score=334.56 Aligned_cols=252 Identities=22% Similarity=0.319 Sum_probs=201.8
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +++.||+|+++.....+....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999765 6889999999865444444567788999999998 799999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 9999998765 3588999999999999999999999 999999999999999999999999999875333233334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-ccccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-NLSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+............ ......+.......+.. .+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~ 230 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS----LSV 230 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC----CCH
Confidence 5678999999999999999999999999999999999999997433221111111 11112223333333322 234
Q ss_pred HHHHHHHHcccCCCCCCCC------HHHHHH
Q 005864 645 SILEVALLCLEESPESRPT------MQTVCQ 669 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rps------~~~v~~ 669 (673)
++.+++.+||+.||.+||+ ++|+++
T Consensus 231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 5889999999999999997 667653
No 59
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.2e-39 Score=324.38 Aligned_cols=261 Identities=21% Similarity=0.321 Sum_probs=210.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|+.. +++.||||.+......+......+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999764 78999999876543344455677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999886432 124578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........+++.|+|||.+.+..++.++|+||+|+++|||++|+.||...... .......+.....+ ....
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~--~~~~ 230 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LFSLCQKIEQCDYP--PLPT 230 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc------HHHHHHHHhcCCCC--CCCh
Confidence 333334456888999999998888999999999999999999999998532110 00001111111111 1112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++||++.+|++.+++
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 2345668999999999999999999999998863
No 60
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.2e-39 Score=329.63 Aligned_cols=260 Identities=20% Similarity=0.280 Sum_probs=200.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|... +++.||+|.++.... ......+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 46889999999999999999765 689999999865421 122456778999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++...+ ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 83 EYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 99985 9999987654 3478889999999999999999999 9999999999999999999999999999865443
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------ccccccc---------
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLS--------- 623 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~--------- 623 (673)
........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.. .......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 333344567899999998865 56899999999999999999999998643221100 0000000
Q ss_pred cccccCCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+...... ........+..+++.+|+..||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0111111111000 000112346889999999999999999999975
No 61
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-39 Score=333.39 Aligned_cols=239 Identities=23% Similarity=0.317 Sum_probs=196.1
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.+ +++.||+|++...........+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999775 6889999998765433344566778888888877 699999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99999987653 478899999999999999999999 999999999999999999999999999876533333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEVVYPT----WLSQD 222 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCHH
Confidence 567899999999999889999999999999999999999999743221 111222222222222 23345
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 005864 646 ILEVALLCLEESPESRPTM 664 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~ 664 (673)
+.+++.+||+.||++||++
T Consensus 223 ~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHcccCHHHCCCC
Confidence 8899999999999999998
No 62
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.6e-39 Score=321.67 Aligned_cols=250 Identities=26% Similarity=0.442 Sum_probs=202.7
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.+|++.+.||+|+||.||+|+++++..+|+|.+..... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 45788899999999999999998888999998764322 24578889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.++++... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+|++|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 80 FMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 999999999997543 3578999999999999999999999 99999999999999999999999999988653322
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
.. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+... ....+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~--------~~~i~~~~~~~~~~-- 224 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV--------VEMISRGFRLYRPK-- 224 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH--------HHHHHCCCCCCCCC--
Confidence 11 122334568999999988889999999999999999999 8999864322111 1111111 111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.+|++||+++++++.|.
T Consensus 225 --~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 --LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12346899999999999999999999999874
No 63
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.9e-40 Score=326.80 Aligned_cols=248 Identities=35% Similarity=0.535 Sum_probs=192.8
Q ss_pred ccceeccCCcEEEEEEEeC-----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 406 AEQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..+.||.|.||.||+|.+. .+..|+||.++.. ......+.+.+|++.+.+++||||++++|++...+..++|+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccccccc
Confidence 3578999999999999775 3668999998553 23334788999999999999999999999999888899999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ...+++.++.+|+.||++||+|||+. +++|+||+++||++++++.+||+|||++......
T Consensus 81 e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp E--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 9999999999998862 24589999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCCC
Q 005864 561 SSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPS 636 (673)
Q Consensus 561 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 636 (673)
... .........|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.+.. .+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~--------~~~~~~~~~~~~~~~ 228 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE--------IIEKLKQGQRLPIPD 228 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH--------HHHHHHTTEETTSBT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccceecc
Confidence 221 122346778999999999899999999999999999999 788876432111 111111111 11111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
..+..+.+++..||+.||++|||++++++.|
T Consensus 229 ----~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 ----NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2234588999999999999999999999986
No 64
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-40 Score=312.37 Aligned_cols=262 Identities=22% Similarity=0.329 Sum_probs=206.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-----C
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-----P 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~ 473 (673)
....|...+.||+|+||.|+.|.. .+|+.||||++...... ....++..+|+..++.++|+||+.+.+.+.. -
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~-~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN-QIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc-hHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 345566678999999999999966 47999999998755433 3457788899999999999999999999864 3
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+..|+|+|+|+. +|...++... .++...+..++.|+++||.|+|+. +++||||||+|++++.+..+||+|||+
T Consensus 99 ~DvYiV~elMet-DL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELMET-DLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHHhh-HHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 568999999955 9999998763 488899999999999999999999 999999999999999999999999999
Q ss_pred eeecCCC--CCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc
Q 005864 554 AKFLKPG--SSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS 623 (673)
Q Consensus 554 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~ 623 (673)
|+..... ....+..+.|.+|+|||.+. ...|+.+.||||.|||+.||++|+.-|.+.+.+.+.... .++.
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 9987542 33457788899999999875 567999999999999999999999999766554332111 1111
Q ss_pred --------cccccCCCCCCCCc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 --------LNEILDPRLPLPSR----NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 --------~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+..-...+.. ..+...+...+++.+||..||.+|+|++|.++
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111111111111 11233456889999999999999999999875
No 65
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.5e-39 Score=331.26 Aligned_cols=241 Identities=25% Similarity=0.336 Sum_probs=194.2
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|... +++.||+|.++..........+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 5889999998765433334455566677777654 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99999997653 478889999999999999999999 999999999999999999999999999986544344445
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILNDRPHFPR----WISKE 222 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHH
Confidence 567899999999999889999999999999999999999999743221 111111111111121 22345
Q ss_pred HHHHHHHcccCCCCCCCCHHH
Q 005864 646 ILEVALLCLEESPESRPTMQT 666 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~ 666 (673)
+.+++.+||+.||++||++.+
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred HHHHHHHHccCCHHHcCCChH
Confidence 789999999999999998764
No 66
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.4e-39 Score=331.88 Aligned_cols=259 Identities=22% Similarity=0.330 Sum_probs=203.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|+.. +|..||+|.+.... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 367999999999999999999775 68899999887542 223456799999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++.... .+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred eecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999997653 4788899999999999999999862 699999999999999999999999999876533
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc---cccc----cccc--------
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS---SSNM----NLSL-------- 624 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~----~~~~-------- 624 (673)
. ......|++.|+|||++.+..++.++|||||||++|||++|+.||......+.. .... ....
T Consensus 157 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred c--ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence 2 223456899999999999989999999999999999999999999643211000 0000 0000
Q ss_pred -----------------------ccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 625 -----------------------NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 625 -----------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+..... +.......+.++.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPP--PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCC--cCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 000011234568999999999999999999999863
No 67
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.5e-39 Score=332.82 Aligned_cols=244 Identities=21% Similarity=0.279 Sum_probs=199.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC-CcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-RNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 480 (673)
+|++.+.||+|+||.||+|... +++.||+|++...........+.+..|.+++..++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999765 578999999876544344456778889999999976 46888999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999997653 478899999999999999999999 9999999999999999999999999998754333
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~~~~~---- 222 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNVSYPK---- 222 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCC----
Confidence 33344567899999999999999999999999999999999999999743221 111222222222222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH
Q 005864 641 DKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.++.+++.+||+.||.+|++.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 223 SLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 223458899999999999999976
No 68
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.9e-39 Score=323.48 Aligned_cols=261 Identities=23% Similarity=0.342 Sum_probs=211.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|.. .+|+.||||.+......+.....++.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999975 479999999887644444445678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++++|.+++.... ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999987422 234589999999999999999999999 999999999999999999999999999887654
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........++..|+|||++.+..++.++||||||+++|||++|..||...... .......+.....+ ....
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~--~~~~ 230 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYP--PLPS 230 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhhcCCCC--CCCc
Confidence 433334456888999999998888999999999999999999999998532110 00111111111111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.||++|||+.+|++++++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 231 DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 2345579999999999999999999999998874
No 69
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.3e-39 Score=326.05 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=205.7
Q ss_pred cCCCccceeccCCcEEEEEEEeCC------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|++.+.||+|+||.||+|.... +..||+|.+.... .......+.+|+..+.+++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468889999999999999997642 2579999886542 23345678999999999999999999999999899
Q ss_pred eeEEEecccCCChHHHHhcCCCC-------------ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 476 SFLVYECLERGSLAEILSNDGSI-------------KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
.+++|||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++|+||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 99999999999999999764211 3478899999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
++.++|+|||++........ ......+++.|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~----- 234 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE----- 234 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----
Confidence 99999999999986543221 1223456788999999988899999999999999999998 999986432211
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+....... .....+.++.+++.+||+.||.+||+++||++.|++
T Consensus 235 ---~~~~i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 ---VIEMIRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHHHHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111111111111 112345679999999999999999999999999874
No 70
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-40 Score=320.36 Aligned_cols=253 Identities=24% Similarity=0.329 Sum_probs=205.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh-----------hHHHHHHHHHHHHHhccCCCccccee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE-----------ISVQREFLNEIKALTEIRHRNIVKFY 467 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv~l~ 467 (673)
..++|++.+.||+|.||.|-+|+.. +++.||||++.+..... ....+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3478999999999999999999664 79999999996542211 11235788999999999999999999
Q ss_pred eeeecC--CeeeEEEecccCCChHHHHhcCCCCcc-chHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 468 GFCSHP--RHSFLVYECLERGSLAEILSNDGSIKE-FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 468 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
.+..++ +..|+|+|||..|.+... ....+ ++..++++++.++..||.|||.+ +|+||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 999764 578999999998887542 22234 89999999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCC-----CCCceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccccc
Q 005864 545 EARVSDFGIAKFLKPG-----SSNWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSS 615 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 615 (673)
+|||+|||.+.....+ ........|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-..
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~----- 322 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD----- 322 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc-----
Confidence 9999999999866332 12234578999999999987633 356899999999999999999998632
Q ss_pred cccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+++...+.+|.. .+....+.++|+++|.+||++|-+..+|..
T Consensus 323 ---~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 323 ---FELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred ---hHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 2234455666666665533 245567999999999999999999998864
No 71
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.8e-39 Score=333.49 Aligned_cols=244 Identities=22% Similarity=0.285 Sum_probs=199.5
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +|+.||+|++...........+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999765 5889999998765443444566778899998876 799999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99999987653 478899999999999999999999 999999999999999999999999999986543333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--------~~~~~i~~~~~~~p~----~~~~~ 222 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--------DLFESILHDDVLYPV----WLSKE 222 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHH
Confidence 567899999999999889999999999999999999999999743221 112222222222222 12345
Q ss_pred HHHHHHHcccCCCCCCC-------CHHHHHH
Q 005864 646 ILEVALLCLEESPESRP-------TMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rp-------s~~~v~~ 669 (673)
+.+++.+||+.||++|| +++++++
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 88999999999999999 7787764
No 72
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-39 Score=335.38 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=196.9
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +++.||+|+++..........+.+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999765 6889999999875444444566788899988877 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 9999988765 3478899999999999999999999 999999999999999999999999999975433333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-cccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN-LSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||+............. .....+.......+. ..+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~----~~~~ 230 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSV 230 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC----CCCH
Confidence 56789999999999999999999999999999999999999963222111101001 111122222333322 2334
Q ss_pred HHHHHHHHcccCCCCCCCCH
Q 005864 645 SILEVALLCLEESPESRPTM 664 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rps~ 664 (673)
.+.+++.+||+.||++||++
T Consensus 231 ~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 231 KAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHHhcCCHHHcCCC
Confidence 58899999999999999983
No 73
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.5e-40 Score=342.89 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=207.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|+.. +|+.||+|+++............+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36889999999999999999775 69999999997654444445678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999875 3578899999999999999999998 9999999999999999999999999999876543
Q ss_pred C-----------------------------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 561 S-----------------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 561 ~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 3 12234568999999999999999999999999999999999999987433
Q ss_pred cccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 005864 612 LLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPT-MQTVCQ 669 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~v~~ 669 (673)
..+. ...+.. .....+... ..+.++.+++.+|+. ||.+||+ ++|+++
T Consensus 235 ~~~~--------~~~i~~~~~~~~~p~~~--~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 235 LQET--------YNKIINWKESLRFPPDP--PVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HHHH--------HHHHhccCCcccCCCCC--CCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 2111 111111 111111111 134568899999997 9999999 999986
No 74
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=330.30 Aligned_cols=253 Identities=27% Similarity=0.359 Sum_probs=224.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 478 (673)
...|++.+.||+|.||.||+++.+. |+.+|+|.+.+...........+.+|+.+|+++. |||||.+++++.+....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3568888999999999999998765 9999999998766554445678999999999998 9999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC----CceEEecccce
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE----YEARVSDFGIA 554 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~ 554 (673)
|||++.||.|.+.+... .+++..+..++.|++.|++|||+. |++|||+||+|+++... +.+|++|||++
T Consensus 114 vmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999999876 288999999999999999999998 99999999999999643 47999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
..... .......+||+.|+|||++....|+.++||||+|+++|.|+.|..||..... ......+...++.+
T Consensus 187 ~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~--------~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 187 KFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE--------FEIFLAILRGDFDF 257 (382)
T ss_pred eEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh--------hHHHHHHHcCCCCC
Confidence 98876 5566789999999999999999999999999999999999999999984332 22334667777777
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....|...+..+.+++..|+..||.+|+|+.++++
T Consensus 258 ~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 258 TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 77788888999999999999999999999999986
No 75
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.9e-39 Score=330.81 Aligned_cols=261 Identities=20% Similarity=0.296 Sum_probs=198.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|+.. +|+.||+|++...... .....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE--GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc--ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 367999999999999999999775 6899999998654222 2234577899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 82 FEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 99996 58888886543 3478888999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc--------ccccccc-----
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS--------NMNLSLN----- 625 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~--------~~~~~~~----- 625 (673)
.........+++.|+|||++.+ ..++.++||||+||++|||++|+.||........... .....+.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 3333344568899999998865 4578899999999999999999999975322110000 0000000
Q ss_pred -cccCCCCCC-CCcchH------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 -EILDPRLPL-PSRNIQ------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 -~~~~~~~~~-~~~~~~------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.. ...... ..+..+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000 000000 01235789999999999999999999985
No 76
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=311.71 Aligned_cols=248 Identities=26% Similarity=0.414 Sum_probs=215.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
-|++++.+|+|+||.||+|.++ +|+.+|+|++... ...+++..|+.+|++++.|++|++||.+......++|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 3677889999999999999664 7999999987543 247889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||.-|+..++++.++ +++++.++..++++.++||+|||.. .-+|||||+.||+++.+|.+|++|||.|..+....
T Consensus 109 YCGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 109 YCGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hcCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 999999999998765 6799999999999999999999998 78999999999999999999999999998776555
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.....+.||+.|||||++..-.|+.++||||+|++..||..|++||..+.+.+.. -++..+.+.-......
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI---------FMIPT~PPPTF~KPE~ 254 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI---------FMIPTKPPPTFKKPEE 254 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee---------EeccCCCCCCCCChHh
Confidence 5667789999999999999999999999999999999999999999876654331 1122233333344556
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++++||-+.|++|.|+.++++
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 6778999999999999999999999886
No 77
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.2e-39 Score=327.12 Aligned_cols=254 Identities=22% Similarity=0.264 Sum_probs=203.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||+||++... +++.||+|++.............+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999764 689999999875443333334567889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 9999999998875432 4589999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||........ .......+..... .....
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~---~~~~~ 227 (285)
T cd05605 157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-----REEVERRVKEDQE---EYSEK 227 (285)
T ss_pred -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-----HHHHHHHhhhccc---ccCcc
Confidence 22345688999999999988899999999999999999999999974221100 0001111111111 11123
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+..+.+++.+||+.||++|| +++++++
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 445688999999999999999 8888864
No 78
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.5e-39 Score=339.72 Aligned_cols=252 Identities=22% Similarity=0.291 Sum_probs=203.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 467899999999999999999765 6899999998754333334456688999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999998753 367788888999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceecccccccccccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC--C
Q 005864 560 GSS-NWTEFAGTFGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR--L 632 (673)
Q Consensus 560 ~~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~ 632 (673)
... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... .....+.... +
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~~ 266 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMDHKNSL 266 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCcC
Confidence 322 22345789999999988653 3788999999999999999999999743221 1112222211 1
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
..+. ....+.++.+++.+|+..+|++ ||+++|+++
T Consensus 267 ~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 267 TFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1111 1123456889999999999987 999999975
No 79
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=344.70 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=210.1
Q ss_pred cCCCccceeccCCcEEEEEEEeCCC-CEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeee-eec------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSG-EVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGF-CSH------ 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~~------ 472 (673)
.++++.++|.+|||+.||.|+...+ ..||+|++-.. ++...+...+|+++|+.|+ |+|||.+++. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 4567889999999999999987665 99999998654 5556889999999999996 9999999993 221
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..+++|.||||+||+|-|++..+... .|++.++++|+.|+++|+++||.. .|+|+|||||.+|||++.++..||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 24678999999999999999876543 399999999999999999999987 4589999999999999999999999999
Q ss_pred ceeecCCCCCCc---------eecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc
Q 005864 553 IAKFLKPGSSNW---------TEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 553 ~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 620 (673)
.+.-.-...... -...-|+.|+|||.+. +.++++|+|||+|||+||-|+....||+..
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s---------- 261 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES---------- 261 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC----------
Confidence 987432222111 1234689999999864 678999999999999999999999999832
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 621 NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+|++.++.+|.. +.++..+.+||..||+.||.+||++-||+..+.
T Consensus 262 --g~laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 262 --GKLAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred --cceeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 245677777777643 566778999999999999999999999998763
No 80
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.8e-39 Score=337.88 Aligned_cols=247 Identities=24% Similarity=0.342 Sum_probs=193.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||+||+|... +|+.||||++.... .....+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 4556788999999999999764 68999999986532 23345778999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 153 ~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 153 FMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred cCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999986532 245677788999999999999999 99999999999999999999999999998765443
Q ss_pred CCceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 562 SNWTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.......|+..|+|||++.. ...+.++|||||||++|||++|+.||......+ .......+..... .
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~---~ 294 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-----WASLMCAICMSQP---P 294 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhccCC---C
Confidence 33445678999999998743 224568999999999999999999987221100 0000000000000 0
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111233456899999999999999999999986
No 81
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.6e-39 Score=331.48 Aligned_cols=244 Identities=20% Similarity=0.275 Sum_probs=200.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+|++.+.||+|+||+||+|... +++.||+|.+...........+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999765 5789999998765433344456677788888877 5899999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999987653 478899999999999999999999 9999999999999999999999999999765433
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--------~~~~~~i~~~~~~~p~---- 222 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPK---- 222 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCC----
Confidence 3334456789999999999999999999999999999999999999974322 1112223333333332
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH
Q 005864 641 DKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.++.+++.+|++.||++|++.
T Consensus 223 ~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 223 SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred cCCHHHHHHHHHHcccCHHhcCCC
Confidence 233458899999999999999984
No 82
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.6e-39 Score=330.53 Aligned_cols=244 Identities=23% Similarity=0.298 Sum_probs=199.7
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|... +++.||+|+++............+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999775 5889999999865444444566778899999888 799999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99999987653 488999999999999999999999 999999999999999999999999999875433333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+..
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSILEDEVRYPR----WLSKE 222 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHHcCCCCCCC----cCCHH
Confidence 456899999999999999999999999999999999999999743221 111112222222221 22345
Q ss_pred HHHHHHHcccCCCCCCCCH-----HHHHH
Q 005864 646 ILEVALLCLEESPESRPTM-----QTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~-----~~v~~ 669 (673)
+.+++.+||+.||++||++ .++++
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 8899999999999999999 77764
No 83
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-40 Score=300.47 Aligned_cols=256 Identities=24% Similarity=0.380 Sum_probs=220.3
Q ss_pred HHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
..-+.|+..+.+|.|..++|-+..+ ++|+.+|+|++...... ...-.+...+|+.+|+++ .||+|+++.+++.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3346788889999999999998855 47889999988543221 122345678899999999 6999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
.+...++|+|.|+.|.|.|++.+. -.+++....+|+.|+.+|+.|||.. .||||||||+||+++++.++||+||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 999999999999999999999875 4589999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceeccccccccccccccc------CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
|++..+.++ ......+|||+|.|||.+.. ..|+..+|.|+.|||+|-++.|.+||..- .....+.
T Consensus 168 GFa~~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--------kQmlMLR 238 (411)
T KOG0599|consen 168 GFACQLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--------KQMLMLR 238 (411)
T ss_pred ceeeccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--------HHHHHHH
Confidence 999988664 45577899999999998753 34788999999999999999999998732 1223355
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
-++.+++.+....|.+.+....++|.+|++.||++|-|++|+++
T Consensus 239 ~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 239 MIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 67788888888899999999999999999999999999999875
No 84
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.9e-39 Score=328.37 Aligned_cols=261 Identities=24% Similarity=0.313 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +++.||+|++...... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 36889999999999999999875 6889999998754322 233567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++++.+..+.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 80 EYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999997776554432 3578899999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccc---------c
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNL---------S 623 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~---------~ 623 (673)
.. ......|++.|+|||++.+..++.++||||+||++|||++|+.||......+..... ... .
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 22 223456899999999999888999999999999999999999999743221110000 000 0
Q ss_pred cccccCCCCCCCC----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLPS----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+....+. ......+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000 011123456999999999999999999999975
No 85
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.7e-39 Score=321.58 Aligned_cols=254 Identities=22% Similarity=0.398 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|+.++++++|+||+++++++..++..+++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 357889999999999999999988889999998764321 2567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.++++... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||++......
T Consensus 81 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 81 EYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred ecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999997643 24578899999999999999999998 9999999999999999999999999999876433
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... .....++..|+|||++....++.++||||||+++|||++ |+.||....... ....+. .....+.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--------~~~~~~-~~~~~~~-- 225 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--------VMSALQ-RGYRMPR-- 225 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--------HHHHHH-cCCCCCC--
Confidence 221 122345678999999988889999999999999999998 999986321110 000000 0111110
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.++.+++.+||+.+|++||+++++.+.|++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11233468899999999999999999999999975
No 86
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.4e-39 Score=340.82 Aligned_cols=251 Identities=23% Similarity=0.293 Sum_probs=202.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.............+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36889999999999999999775 68999999997654333445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999997653 488899999999999999999999 9999999999999999999999999998765321
Q ss_pred CC--------------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh
Q 005864 561 SS--------------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 602 (673)
Q Consensus 561 ~~--------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~ 602 (673)
.. ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012358999999999999899999999999999999999
Q ss_pred CCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 005864 603 GKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVCQ 669 (673)
Q Consensus 603 g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~~ 669 (673)
|..||......+. ...+.. ..+..+.. ...+.++.+++.+|+. +|.+|++ ++|+++
T Consensus 235 G~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 235 GYPPFCSDNPQET--------YRKIINWKETLQFPDE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCCHHHH--------HHHHHcCCCccCCCCC--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999974332111 111111 11111111 1223457889999996 9999998 888865
No 87
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=311.77 Aligned_cols=260 Identities=26% Similarity=0.379 Sum_probs=197.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhc--cCCCcccceeeeeecCC----
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE--IRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~---- 474 (673)
.++..+.+.||+|.||+||+|+| -|..||||++... + .+.+.+|.++.+. +||+||+.+++.-..++
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--d----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--D----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEeccc--c----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 45778889999999999999999 5899999999653 3 2345556666665 49999999998875543
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEecCCCCCeEeCCCCceEEe
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-----FPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
..++|++|.+.|||+|+|.+. .++....++++..+|.||++||... .|.|.|||||+.||++..++.+.|+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 468999999999999999874 4888999999999999999999764 4899999999999999999999999
Q ss_pred cccceeecCCCCC----CceecccccccccccccccCC------cCcchhHHHHHHHHHHHHhC----------CCCCcc
Q 005864 550 DFGIAKFLKPGSS----NWTEFAGTFGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKG----------KHPRDF 609 (673)
Q Consensus 550 Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~~g----------~~p~~~ 609 (673)
|+|+|........ .....+||.+|||||++...- .-..+||||||+|+||+..+ +.||..
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence 9999988766533 235678999999999986432 12368999999999999863 345553
Q ss_pred cccccccccccc-cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 610 ISLLSSSSSNMN-LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 610 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.-+.+...+... ..-.+.+.|.++- .....+....+.++++.||..+|..|-|+--+-+.|.
T Consensus 439 ~Vp~DPs~eeMrkVVCv~~~RP~ipn-rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 439 VVPSDPSFEEMRKVVCVQKLRPNIPN-RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred CCCCCCCHHHHhcceeecccCCCCCc-ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 322221111110 0011112222221 1233456778999999999999999999988877764
No 88
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.9e-39 Score=337.53 Aligned_cols=252 Identities=22% Similarity=0.282 Sum_probs=197.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +++.||+|++......+......+.+|+.++.+++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36889999999999999999664 68999999997654444445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999998653 488899999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCC
Q 005864 561 SS-----------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 605 (673)
Q Consensus 561 ~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 605 (673)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 0123468999999999999999999999999999999999999
Q ss_pred CCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHccc--CCCCCCCCHHHHHH
Q 005864 606 PRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLE--ESPESRPTMQTVCQ 669 (673)
Q Consensus 606 p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~~v~~ 669 (673)
||......+. ...+.. ..+..+... ..+.++.+++.+++. .++..||+++|+++
T Consensus 235 Pf~~~~~~~~--------~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 235 PFCSETPQET--------YKKVMNWKETLIFPPEV--PISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCCCHHHH--------HHHHHcCcCcccCCCcC--CCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 9974322111 111111 111111110 122346667766443 23445799999875
No 89
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.9e-39 Score=323.72 Aligned_cols=256 Identities=26% Similarity=0.433 Sum_probs=206.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|.+.+.||+|+||.||+|... +++.||+|.++.... ....+.+.+|++++..++||||+++++++..+..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 46888899999999999999763 357899999875422 2245789999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC-----------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS-----------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
.++||||+++|+|.+++...+. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 9999999999999999976431 24578899999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~ 621 (673)
.++++|||++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-------- 231 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-------- 231 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------
Confidence 999999999976533221 1223345678999999999999999999999999999998 99998633211
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.....+.......+. ...+..+.+++.+||+.||++||++.||++.|++
T Consensus 232 ~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 232 EVIECITQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111111122222111 1234568999999999999999999999999975
No 90
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-39 Score=310.90 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=214.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||.|.-|+||+++..+ +..+|+|++.+..........+...|-++|+.++||.++.+|+.++.+...|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 346667889999999999998864 6899999999887777777888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC-
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP- 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~- 559 (673)
|||+||+|+...+++. .+.+++..+..++..|+-||+|||.. |||.|||||+|||+.++|++.++||+++.....
T Consensus 157 eyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999988764 46799999999999999999999999 999999999999999999999999999764311
Q ss_pred ------C-------------------------C-C-----------------------CceecccccccccccccccCCc
Q 005864 560 ------G-------------------------S-S-----------------------NWTEFAGTFGYVAPELAYTMKV 584 (673)
Q Consensus 560 ------~-------------------------~-~-----------------------~~~~~~~~~~y~aPE~~~~~~~ 584 (673)
. . . ....++||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 0 0012457889999999999999
Q ss_pred CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC-
Q 005864 585 TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT- 663 (673)
Q Consensus 585 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps- 663 (673)
+.++|.|+|||++|||+.|..||.+. ..++.+..++-..+.++... ..+.++.+||++.|.+||++|--
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~--------~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGS--------NNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCC--------CchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhcc
Confidence 99999999999999999999999843 33455566666666555332 55667999999999999999987
Q ss_pred ---HHHHH
Q 005864 664 ---MQTVC 668 (673)
Q Consensus 664 ---~~~v~ 668 (673)
+.||.
T Consensus 383 ~rGA~eIK 390 (459)
T KOG0610|consen 383 KRGAAEIK 390 (459)
T ss_pred ccchHHhh
Confidence 66654
No 91
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=316.92 Aligned_cols=255 Identities=24% Similarity=0.312 Sum_probs=195.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----ee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 476 (673)
.|...+++|.|+||.||+|... +++.||||++..... .-.+|+++|+.++|||||++.-+|.... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 4666799999999999999664 579999998765422 2246999999999999999999885432 33
Q ss_pred eEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccce
Q 005864 477 FLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIA 554 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 554 (673)
.+|||||+. +|++.++.. .....++...+.-+..||++||+|||+. +|+||||||.|+|+|.+ |.+||||||.|
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 589999998 999999842 1124466677788999999999999998 99999999999999987 89999999999
Q ss_pred eecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------- 620 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------- 620 (673)
+....+... .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.+..++.....
T Consensus 174 K~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 174 KVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 998766554 456778999999988764 69999999999999999999999997654432211110
Q ss_pred -ccccccccCCCCCCCCc---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 -NLSLNEILDPRLPLPSR---NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 -~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+...+.+..... .....+.+..+++.+++..+|.+|.++.|+++
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 00011122222221110 22334567999999999999999999999875
No 92
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.7e-39 Score=324.47 Aligned_cols=258 Identities=21% Similarity=0.348 Sum_probs=203.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ......++.+|+.+++.++||||+++++++..+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4567999999999999999999653 35679999876432 223456788999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC-------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCce
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA 546 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 546 (673)
...++||||+++|+|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 999999999999999999975331 13467888999999999999999998 99999999999999999999
Q ss_pred EEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
+++|||+++......... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~ 230 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QV 230 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HH
Confidence 999999987654322211 12344678999999998889999999999999999999 78887633211 11
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+......... ...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 231 ~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 231 LRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111111111111 1223468899999999999999999999999875
No 93
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.4e-39 Score=310.15 Aligned_cols=264 Identities=21% Similarity=0.302 Sum_probs=206.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCc-ccceeeeeecCC-----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN-IVKFYGFCSHPR----- 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~----- 474 (673)
..|+..+.||+|.||+||+|+.+ +|+.||+|++.-.... +.......+|+.+++.++|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 34666778999999999999664 7999999998765332 223456789999999999999 999999998877
Q ss_pred -eeeEEEecccCCChHHHHhcCCCC-ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 -HSFLVYECLERGSLAEILSNDGSI-KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 -~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++||||++. +|..++...... ..++...+..++.|+++|++|||++ +|+||||||.||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 78899999987 999999876532 3456688999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------cccccccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLSL 624 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~ 624 (673)
+|+...-+....+..++|.+|+|||++.+. .|++..||||+|||++||++++.-|.+....++. +...+..+
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 999776555667778899999999998876 6999999999999999999999988755443221 11111111
Q ss_pred cccc---CCCCCCCCcc-----hH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 625 NEIL---DPRLPLPSRN-----IQ---DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 625 ~~~~---~~~~~~~~~~-----~~---~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+. +-+..++... .. .......+++.+|++.+|.+|.|++.+++.
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1111 1111111111 11 111368899999999999999999998864
No 94
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.6e-39 Score=339.95 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=198.9
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|+. .+++.||+|++...........+.+.+|++++..++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999966 4688999999976544444456789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999997653 478888899999999999999999 99999999999999999999999999975331100
Q ss_pred C-----------------------------------------------CceecccccccccccccccCCcCcchhHHHHH
Q 005864 562 S-----------------------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594 (673)
Q Consensus 562 ~-----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 594 (673)
. ......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 01234689999999999988899999999999
Q ss_pred HHHHHHHhCCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHH--cccCCCCCCCCHHHHHH
Q 005864 595 VLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669 (673)
Q Consensus 595 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~--cl~~dp~~Rps~~~v~~ 669 (673)
|++|||++|+.||......+. ...+.. .....+. ....+.++.+++.+ |+..+|..||+++|+++
T Consensus 236 ~il~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~--~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTET--------QLKVINWENTLHIPP--QVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHH--------HHHHHccccccCCCC--CCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 999999999999974322111 111111 1111111 11223457788887 55667777999999975
No 95
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.5e-39 Score=328.49 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=194.8
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +++.||+|.++..........+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999775 5889999998765433233455667788888764 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 9999999764 3478889999999999999999999 999999999999999999999999999976433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+.......+. ....+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~~ 222 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--------LFQSIRMDNPCYPR----WLTRE 222 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCCCCc----cCCHH
Confidence 5678999999999999899999999999999999999999987432211 11111111111111 22345
Q ss_pred HHHHHHHcccCCCCCCCCHH-HHH
Q 005864 646 ILEVALLCLEESPESRPTMQ-TVC 668 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~-~v~ 668 (673)
+.+++.+||+.||++||++. ++.
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHH
Confidence 88999999999999999997 554
No 96
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.1e-39 Score=337.57 Aligned_cols=257 Identities=23% Similarity=0.377 Sum_probs=203.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 473 (673)
.++|.+.+.||+|+||.||+|.+. .+..||||++.... .....+.+.+|++++.+++ ||||++++++|.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 467889999999999999999752 23479999986542 2234567999999999996 99999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
+..++||||+++|+|.+++.....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999999865310
Q ss_pred -------------------------------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe
Q 005864 498 -------------------------------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL 540 (673)
Q Consensus 498 -------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 540 (673)
...+++..+..++.|+++|++|||+. +++||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence 12477888899999999999999999 99999999999999
Q ss_pred CCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccc
Q 005864 541 SSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSS 617 (673)
Q Consensus 541 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~ 617 (673)
++++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-- 348 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-- 348 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--
Confidence 9999999999999987643322 1123446788999999998899999999999999999997 9999864311100
Q ss_pred cccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 618 SNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 618 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+... +.+.+ ...+..+.+++.+||+.||++||++.+|.++|++
T Consensus 349 -----~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 349 -----FYNKIKSGYRMAKP----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred -----HHHHHhcCCCCCCC----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 00001111 11111 2334568999999999999999999999999863
No 97
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.8e-39 Score=321.52 Aligned_cols=256 Identities=26% Similarity=0.470 Sum_probs=209.9
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+...+|++.+.||.|+||.||+|...+++.+|+|.+..... .....+.+|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 34567889999999999999999988899999999865422 235678899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+....
T Consensus 80 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred EEeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 9999999999999986532 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPS 636 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 636 (673)
..........++..|+|||......++.++||||||+++|+|++ |+.||......+ ....+... +.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~- 226 (261)
T cd05148 156 EDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--------VYDQITAGYRMPCP- 226 (261)
T ss_pred CccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--------HHHHHHhCCcCCCC-
Confidence 43322233445678999999988889999999999999999998 899986432111 11111111 11111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.++.+++.+||+.||.+|||++++.+.|+.
T Consensus 227 ---~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 227 ---AKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2334568899999999999999999999999873
No 98
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.6e-39 Score=328.68 Aligned_cols=243 Identities=24% Similarity=0.295 Sum_probs=195.4
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +|+.||+|.++..........+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999775 6899999998765433233455667788888765 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 9999998765 3478889999999999999999999 999999999999999999999999999875433333445
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~ 222 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDTPHYPR----WITKE 222 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC----CCCHH
Confidence 567899999999999999999999999999999999999998743211 111111111111121 12345
Q ss_pred HHHHHHHcccCCCCCCCCHH-HHH
Q 005864 646 ILEVALLCLEESPESRPTMQ-TVC 668 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~-~v~ 668 (673)
+.+++.+||+.||++||++. ++.
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHH
Confidence 88999999999999999985 554
No 99
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2e-39 Score=338.18 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=202.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3568999999999999999999775 588999999875433333445668899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999999754 367888999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC--
Q 005864 559 PGSS-NWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR-- 631 (673)
Q Consensus 559 ~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 631 (673)
.... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+++..
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--------~~~~~i~~~~~~ 265 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--------GTYSKIMDHKNS 265 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCcc
Confidence 3322 223567999999999987543 788999999999999999999999743221 1122222221
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
+..+. ....+..+.+++..|+..+|.+ ||++.|+++
T Consensus 266 ~~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 266 LNFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred cCCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 22221 1223455788899999865543 889999875
No 100
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.5e-39 Score=318.89 Aligned_cols=254 Identities=25% Similarity=0.433 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|++|.||+|...+++.||+|.++.... ..+++.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 456889999999999999999887888999999865322 2467889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 81 ELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 9999999999997654 24589999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... ......+..|+|||++.+..++.++||||||+++|||++ |+.||....... ... .+......+ .
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~-~~~~~~~~~--~ 225 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--------VLQ-QVDQGYRMP--C 225 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--------HHH-HHHcCCCCC--C
Confidence 211 111223457999999998899999999999999999999 999986432111 000 111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+..+.+++.+|++.+|.+||+++++++.|++
T Consensus 226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11234568999999999999999999999999974
No 101
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.6e-39 Score=332.52 Aligned_cols=240 Identities=23% Similarity=0.289 Sum_probs=192.9
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHH-HHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|... +|+.||+|++...........+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999775 69999999987653333333445555555 56788999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 9999999765 3478889999999999999999999 999999999999999999999999999875433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA--------EMYDNILNKPLRLKP----NISVS 222 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHH
Confidence 567899999999999999999999999999999999999998743221 111122222222222 22445
Q ss_pred HHHHHHHcccCCCCCCCCHH
Q 005864 646 ILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~ 665 (673)
+.+++.+|++.||++||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCC
Confidence 88999999999999999984
No 102
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.7e-38 Score=318.07 Aligned_cols=261 Identities=23% Similarity=0.332 Sum_probs=211.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|.++.....+....+.+.+|++++++++|+|++++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999776 79999999887544344445678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.+++.... ....+++.++..++.+++.|++|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999986532 234578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .............+. ...
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~--~~~ 230 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEKCDYPP--LPA 230 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc------HHHHHhhhhcCCCCC--CCh
Confidence 433334456888999999998888999999999999999999999998532110 000000111111110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||..+|++|||+.+++++|++
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 1344568899999999999999999999999863
No 103
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8.8e-39 Score=317.57 Aligned_cols=251 Identities=24% Similarity=0.414 Sum_probs=202.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|.+.+.||+|+||+||.|+..++..||+|.+..... ....+.+|+.++.+++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 35778899999999999999887777899998764322 24568899999999999999999999999889999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 80 YMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 999999999997653 2589999999999999999999999 99999999999999999999999999998664332
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. .....++..|+|||...+..++.++||||||+++|||++ |..||......+ ....+..........
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 224 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--------TVEKVSQGLRLYRPH-- 224 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHhcCCCCCCCC--
Confidence 11 112235578999999988889999999999999999998 999986432211 111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 225 -~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 -LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 12356899999999999999999999999874
No 104
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=315.71 Aligned_cols=258 Identities=27% Similarity=0.418 Sum_probs=195.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhc--cCCCcccceeeeeecCC----e
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE--IRHRNIVKFYGFCSHPR----H 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 475 (673)
......++||+|.||.||+|.+ +++.||||++... ..+.|..|-++.+. ++|+||++++++-.... .
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhc-cCceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 3445667899999999999999 5699999998653 35667777776665 48999999999976555 7
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCC------CCeEEecCCCCCeEeCCCCceEEe
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF------PPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~------~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
+++|+||.+.|+|.++|+.+ .++|....+|+..+++||+|||+... |+|+|||||++|||+..|+++.|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 89999999999999999875 48999999999999999999998643 799999999999999999999999
Q ss_pred cccceeecCCCCCC--ceecccccccccccccccCC-c-----CcchhHHHHHHHHHHHHhCCCCCcc------ccccc-
Q 005864 550 DFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMK-V-----TEKCDVYSFGVLALEVIKGKHPRDF------ISLLS- 614 (673)
Q Consensus 550 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-~-----~~~~Dv~slG~il~el~~g~~p~~~------~~~~~- 614 (673)
|||+|.++.++... ...-+||.+|||||++.+.. + -.+.||||+|.|+|||+++-..++. .-+.+
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 99999998765432 23368999999999987653 2 2368999999999999986554421 11111
Q ss_pred -ccccccccc-----cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 615 -SSSSNMNLS-----LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 615 -~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
.......+. ..+...|.++...... .....+.+.+..||.+||+.|-|+.=|.+++
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 111111111 1222233333111111 2345689999999999999999998777655
No 105
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.4e-39 Score=335.96 Aligned_cols=252 Identities=24% Similarity=0.288 Sum_probs=203.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +|+.||+|+++..........+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999765 68999999998765444445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999998753 3588899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ceecccccccccccccc------cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--C
Q 005864 561 SSN-WTEFAGTFGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP--R 631 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 631 (673)
... .....|++.|+|||++. ...++.++|||||||++|||++|+.||........ ...++.. .
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--------~~~i~~~~~~ 227 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT--------YNNIMNFQRF 227 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH--------HHHHHcCCCc
Confidence 322 23356899999999986 45678899999999999999999999964322111 1111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+. ....+.++.+++.+|+. +|.+||+++++++
T Consensus 228 ~~~~~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 LKFPE--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCC--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11111 11234458889999998 9999999999874
No 106
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.4e-39 Score=333.99 Aligned_cols=240 Identities=25% Similarity=0.314 Sum_probs=196.3
Q ss_pred ceeccCCcEEEEEEEe----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+++. .+|+.||+|++...... ......+..|++++.+++||||+++++++..++..++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999964 36899999998764322 223456778999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 81 ~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 81 RGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 999999999764 3488999999999999999999999 9999999999999999999999999999866444333
Q ss_pred ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 564 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+.. .+
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--------~~~~~i~~~~~~~p~~----~~ 222 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--------ETMTMILKAKLGMPQF----LS 222 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--------HHHHHHHcCCCCCCCC----CC
Confidence 44567899999999999888999999999999999999999998743221 1111222222222222 23
Q ss_pred HHHHHHHHHcccCCCCCCCCHHH
Q 005864 644 ISILEVALLCLEESPESRPTMQT 666 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~~~ 666 (673)
..+.+++.+||+.||++||++.+
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCC
Confidence 45889999999999999999544
No 107
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.3e-39 Score=329.46 Aligned_cols=250 Identities=24% Similarity=0.438 Sum_probs=200.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|+..+.||+|+||+||+|.+. +|+ .||+|.++.. ......+++.+|+.+++.++||||++++|+|..+ ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46889999999999999999763 343 4899998643 2233457788999999999999999999999765 56
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 79999999999999998653 3578889999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCce--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC--CC
Q 005864 557 LKPGSSNWT--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD--PR 631 (673)
Q Consensus 557 ~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 631 (673)
+........ ...++..|+|||++.+..++.++||||||+++|||++ |+.||+.....+ ...++. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---------~~~~~~~~~~ 229 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---------ISSILEKGER 229 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHhCCCC
Confidence 654333221 2234678999999999999999999999999999998 999987432211 011111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+.. .+.++.+++.+||+.+|.+||++.++++.+.
T Consensus 230 ~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 230 LPQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 222221 2345889999999999999999999998874
No 108
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-38 Score=318.90 Aligned_cols=253 Identities=28% Similarity=0.448 Sum_probs=204.5
Q ss_pred cCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|.++. ...||||.++... ......+|.+|+.++.+++||||+++++++...+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 568899999999999999997742 4579999886543 2334667899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++++|.+++.... ..+++.++.+++.|++.|++|||+. +|+|+||||+||++++++.++++|||++...
T Consensus 82 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999997654 3688999999999999999999998 9999999999999999999999999999877
Q ss_pred CCCCCCce--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCC
Q 005864 558 KPGSSNWT--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLP 633 (673)
Q Consensus 558 ~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 633 (673)
........ ...++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+... ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 228 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--------VIKAVEDGYRLP 228 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--------HHHHHHcCCCCC
Confidence 52222211 2234578999999998899999999999999999998 999985322110 01111111 111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+ ...+..+.+++.+||+.+|++||+++|+++.|++
T Consensus 229 ~~----~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 229 PP----MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 1234568899999999999999999999999874
No 109
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.9e-39 Score=339.61 Aligned_cols=251 Identities=21% Similarity=0.273 Sum_probs=198.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|.. .+|+.||||++...........+.+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688999999999999999966 478999999987644334445677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999999765 3478888999999999999999999 9999999999999999999999999998633210
Q ss_pred CC-----------------------------------------------CceecccccccccccccccCCcCcchhHHHH
Q 005864 561 SS-----------------------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSF 593 (673)
Q Consensus 561 ~~-----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 593 (673)
.. ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0012468999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCC---CCHHHHH
Q 005864 594 GVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESR---PTMQTVC 668 (673)
Q Consensus 594 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~v~ 668 (673)
||++|||++|+.||......+. ...+.. ..+..+. ....+.++.+++.+|+. +|.+| +++.|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHET--------YRKIINWRETLYFPD--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHH--------HHHHHccCCccCCCC--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 9999999999999964322111 111111 1111111 11223458899999997 66665 6999987
Q ss_pred H
Q 005864 669 Q 669 (673)
Q Consensus 669 ~ 669 (673)
+
T Consensus 304 ~ 304 (377)
T cd05629 304 S 304 (377)
T ss_pred c
Confidence 5
No 110
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8e-39 Score=352.34 Aligned_cols=259 Identities=25% Similarity=0.336 Sum_probs=203.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|++...........+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47899999999999999999765 58999999987654344445678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCC--------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 481 ECLERGSLAEILSNDGS--------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
||++||+|.+++..... ....++..+.+++.||++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864211 12356778899999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCC------------------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccc
Q 005864 553 IAKFLKPGS------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS 614 (673)
Q Consensus 553 ~~~~~~~~~------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 614 (673)
++....... .......||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998762111 01122468999999999999999999999999999999999999986422110
Q ss_pred ccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhh
Q 005864 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP-TMQTVCQLLC 672 (673)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~v~~~L~ 672 (673)
.. .......+... ....+.+..+.+++.+|++.||++|| +++++.+.|+
T Consensus 239 i~------~~~~i~~P~~~---~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 239 IS------YRDVILSPIEV---APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred hh------hhhhccChhhc---cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00 00001111100 01123445688999999999999996 5666666553
No 111
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.6e-39 Score=324.55 Aligned_cols=261 Identities=20% Similarity=0.318 Sum_probs=195.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeec----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSH---- 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~---- 472 (673)
++|++.+.||+|+||+||+|+.. +|+.||+|.++.....+ .....+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 36889999999999999999763 47889999886543222 1234455677776665 69999999999852
Q ss_pred -CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 473 -PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 473 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
....++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 456889999997 599999876432 3478999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLSL 624 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~~ 624 (673)
|++...... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+...... ...+
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 999876433 22344568999999999988899999999999999999999999997433211100000 0000
Q ss_pred -------ccccCCCCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 -------NEILDPRLPLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 -------~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+......+. ....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000111100000 001123456789999999999999999999985
No 112
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-40 Score=328.68 Aligned_cols=252 Identities=24% Similarity=0.403 Sum_probs=209.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+....+.||.|.||.||.|.|+. .-.||||.++.. .....+|..|+.+|+.++|||+|+++|+|..+-.+|||+
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 445566889999999999998864 668999998754 335889999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||.+|+|.++|++... ..++.-..+.+|.||+.||.||..+ ++|||||.++|.|+.++..|||+|||+++++..+
T Consensus 343 EfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred ecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 99999999999998754 4566677788999999999999999 9999999999999999999999999999999765
Q ss_pred CCCce-ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSNWT-EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..... ...-++.|.|||.+....++.|+|||+|||+|||+.| |-.||.+++..+. -..+...++.. .
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV---------Y~LLEkgyRM~--~ 487 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---------YGLLEKGYRMD--G 487 (1157)
T ss_pred ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH---------HHHHhcccccc--C
Confidence 43321 1223578999999999999999999999999999998 8888876544322 12222322221 2
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+++.+++++..||+.+|.+||+++|+-+.+|
T Consensus 488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 2345567999999999999999999999988775
No 113
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1e-38 Score=327.72 Aligned_cols=244 Identities=20% Similarity=0.278 Sum_probs=198.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 480 (673)
+|+..+.||+|+||+||+|... +|+.||+|++...........+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999764 68999999987654333444567888999998885 678888999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999997653 488999999999999999999999 9999999999999999999999999998754333
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~p~---- 222 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPK---- 222 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCc----
Confidence 3333445689999999999988999999999999999999999999874321 1112222222332222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH
Q 005864 641 DKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.++.+++.+||+.+|.+|++.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 223 SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred cCCHHHHHHHHHHcccCHhhCCCC
Confidence 223458899999999999999974
No 114
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=323.98 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=205.0
Q ss_pred CCCccceeccCCcEEEEEEEeC---CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP---SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.....++||.|.||.||+|... .|+ .||||.-+... +.+..+.|.+|..+|+.++|||||+++|+|.+ ...+
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 3445678999999999999653 344 47888766543 33457889999999999999999999999976 4689
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||.++.|.|.++++... ..++......++.||+.||+|||+. .+|||||..+||++.....||++|||+++.+
T Consensus 467 ivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhc
Confidence 9999999999999999875 4688888899999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCC
Q 005864 558 KPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 558 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
..+... .+...-++.|||||.+.-+.++.+||||.|||.+||++. |..||.+....+.... ----.+++.|
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~-------iEnGeRlP~P 614 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH-------IENGERLPCP 614 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE-------ecCCCCCCCC
Confidence 654432 233344678999999999999999999999999999996 9999985433222111 0112355655
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+ ++.++.++.+||+.+|.+||++.|+...|+
T Consensus 615 ~nC----Pp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 615 PNC----PPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred CCC----ChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 544 445899999999999999999999998875
No 115
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-38 Score=315.74 Aligned_cols=248 Identities=25% Similarity=0.420 Sum_probs=197.6
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+|... +|+.||+|.+.... .......+.+|++++++++||||+++++++...+..++|+||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 46999999999999764 79999999876432 2334567899999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc--
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW-- 564 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-- 564 (673)
+|.+++...+ ..+++.++..++.|++.||+|||+. +++||||+|+||+++.++.+|++|||++..........
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999997643 3578999999999999999999999 99999999999999999999999999987554321111
Q ss_pred eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
.....+..|+|||.+.++.++.++||||||+++|||++ |..||....... ....+......+ .....+
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---------~~~~~~~~~~~~--~~~~~~ 222 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---------TREAIEQGVRLP--CPELCP 222 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---------HHHHHHcCCCCC--CcccCC
Confidence 11123457999999998889999999999999999998 888886332110 011111111111 111234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 644 ISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.+++.+||+.+|++|||++++.++|.+
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 568999999999999999999999999864
No 116
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5e-39 Score=333.51 Aligned_cols=259 Identities=25% Similarity=0.417 Sum_probs=195.9
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----Cee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----RHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 476 (673)
+|++.+.||+|+||.||+|... +|+.||||++..... .......+.+|+.+++.++||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 4788899999999999999764 689999999864322 222345788999999999999999999988543 247
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||++ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 99999996 58999987653 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC---Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------cccccccc
Q 005864 557 LKPGSS---NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLSL 624 (673)
Q Consensus 557 ~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~ 624 (673)
...... ......|++.|+|||++.+ ..++.++|||||||++|||++|+.||......... +.......
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 532221 2234578999999999865 67899999999999999999999999643221100 00000000
Q ss_pred c-----------cccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 N-----------EILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ~-----------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ..+....+.+ .......+..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0 0000011100 0011122345789999999999999999999985
No 117
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-38 Score=315.28 Aligned_cols=252 Identities=24% Similarity=0.321 Sum_probs=207.3
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|.+.+.||+|++|.||+|... +|+.|++|.+...... ....+.+.+|+++++.++|||++++++++.+++..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 4777899999999999999765 6899999988653222 3346778999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 80 YAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred eCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999998652 24688999999999999999999998 99999999999999999999999999998775544
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||+..+..++.++|+||||+++|||++|+.||...... .....+.....+... ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~---~~ 224 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--------ALILKIIRGVFPPVS---QM 224 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCc---cc
Confidence 4344456889999999999989999999999999999999999998743211 111111222221111 13
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..+.+++.+||+.+|++||++.++++.
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 225 YSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 44568999999999999999999999863
No 118
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.2e-39 Score=330.08 Aligned_cols=244 Identities=21% Similarity=0.249 Sum_probs=192.7
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHH-HHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEI-KALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +++.||+|++.............+..|. .+++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999775 5788999998754333222334444444 456788999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999997653 467788888999999999999999 999999999999999999999999999975433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~~ 222 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--------MYDNILNKPLQLKP----NITNS 222 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH--------HHHHHHhCCcCCCC----CCCHH
Confidence 5679999999999999999999999999999999999999987432211 11112222222211 23345
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+++.+|++.||.+||++.+.+.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHH
Confidence 889999999999999998875443
No 119
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.1e-38 Score=320.51 Aligned_cols=249 Identities=24% Similarity=0.285 Sum_probs=197.1
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||+||+++.+ +|+.||+|.+...........+.+..|++++++++||||+++++++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999765 6999999998654333333345566799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRA 155 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccC
Confidence 998865432 4588899999999999999999999 99999999999999999999999999998764322 223456
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
|+..|+|||++.+..++.++||||+||++|||++|+.||........ ................. ...+.++.+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~ 228 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA----KEELKRRTLEDEVKFEH---QNFTEESKD 228 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh----HHHHHHHhhcccccccc---ccCCHHHHH
Confidence 88999999999988899999999999999999999999863211000 01111112222222111 123456889
Q ss_pred HHHHcccCCCCCCCCHHHHHHH
Q 005864 649 VALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 649 li~~cl~~dp~~Rps~~~v~~~ 670 (673)
++.+||+.||++||+++|+++.
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHhccCHhhCCCCccchhh
Confidence 9999999999999999776643
No 120
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.3e-38 Score=317.92 Aligned_cols=253 Identities=25% Similarity=0.406 Sum_probs=203.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|.+.+.||+|+||.||+|... .++.||+|.+... .....++.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 45778899999999999999764 5889999987643 223567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 82 EFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999999976432 4578999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSNW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.... ....++..|+|||.+.+..++.++||||||+++|||++ |..||......+.. ....... ....+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-----~~~~~~~--~~~~~--- 227 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKGY--RMERP--- 227 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHCCC--CCCCC---
Confidence 2211 11233568999999998899999999999999999998 99998643211100 0010000 11111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.++.+++.+||+.+|++|||+.|++++|+.
T Consensus 228 -~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 228 -EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred -CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 1234568999999999999999999999999873
No 121
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-38 Score=326.87 Aligned_cols=200 Identities=26% Similarity=0.431 Sum_probs=174.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|.+. +|..+|+|.+.... .......+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 367999999999999999999775 68899999876542 223456789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.|++.|+.|||+.. +++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999997653 4788889999999999999999752 799999999999999999999999999875532
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred h--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2 22335688999999999988899999999999999999999999874
No 122
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.8e-39 Score=328.85 Aligned_cols=240 Identities=23% Similarity=0.300 Sum_probs=192.0
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHH-HHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +|+.||+|++.............+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999775 68899999987654333334455555654 67889999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 9999988754 3477888889999999999999999 999999999999999999999999999875433333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+. .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS--------QMYDNILHKPLQLPG----GKTVA 222 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCHH
Confidence 567899999999999888999999999999999999999998643211 111222222232222 22345
Q ss_pred HHHHHHHcccCCCCCCCCHH
Q 005864 646 ILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~ 665 (673)
+.+++.+|++.||.+||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHccCCHhhcCCCC
Confidence 88999999999999999764
No 123
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.9e-39 Score=330.84 Aligned_cols=241 Identities=23% Similarity=0.307 Sum_probs=193.4
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHH-HHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +|+.||+|++.............+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999764 69999999987654333334455666655 46778999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 9999998765 3578899999999999999999999 999999999999999999999999999875433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~ 222 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--------EMYDNILHKPLVLRP----GASLT 222 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--------HHHHHHHcCCccCCC----CCCHH
Confidence 567899999999999999999999999999999999999998643221 111222222222221 12345
Q ss_pred HHHHHHHcccCCCCCCCCHHH
Q 005864 646 ILEVALLCLEESPESRPTMQT 666 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~ 666 (673)
+.+++.+|++.+|.+||++++
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCC
Confidence 788999999999999998863
No 124
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=343.50 Aligned_cols=250 Identities=21% Similarity=0.219 Sum_probs=201.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-C-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-S-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.|.+.+.||+|+||.||+|... + ++.||+|.+... .......+.+|+.+++.++|||||++++++..++..++||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 4888999999999999999654 4 678888876432 2233566788999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.++++.. .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999999988653 2234588899999999999999999999 999999999999999999999999999987643
Q ss_pred CCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 560 GSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 560 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+........
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--------~~~~~~~~~~~~~~-- 291 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR--------EIMQQVLYGKYDPF-- 291 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC--
Confidence 322 223456899999999999999999999999999999999999998643211 11112222222111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.||++||+++++++
T Consensus 292 -~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 -PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1123346889999999999999999999874
No 125
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-38 Score=327.24 Aligned_cols=246 Identities=22% Similarity=0.290 Sum_probs=197.4
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|... +++.||+|+++..........+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999764 6889999999876544445567788999999988 699999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 9999988764 3488999999999999999999999 999999999999999999999999999975433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||+........ .........+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~p~----~~~~~ 229 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-NTEDYLFQVILEKPIRIPR----FLSVK 229 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc-ccHHHHHHHHHhCCCCCCC----CCCHH
Confidence 567899999999999999999999999999999999999999643211100 0001111122222222222 22345
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 005864 646 ILEVALLCLEESPESRPTM 664 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~ 664 (673)
+.+++.+||+.||++|+++
T Consensus 230 ~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHhccCHHHcCCC
Confidence 7899999999999999984
No 126
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.2e-39 Score=331.98 Aligned_cols=253 Identities=22% Similarity=0.273 Sum_probs=199.5
Q ss_pred CCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+++. .+|+.||+|++...... .....+.+..|+.++..+ +||||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999965 36889999998754322 223456688899999999 599999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999997653 478899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .......+.......
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~ 230 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT----QSEVSRRILKCDPPF 230 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC----HHHHHHHHhcCCCCC
Confidence 543322 22345789999999998765 478899999999999999999999863221100 001111111112222
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+. ..+..+.+++.+||+.||++|| +++|+++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 231 PS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 21 2334588999999999999999 7777764
No 127
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.3e-39 Score=333.96 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=204.1
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
.++....++|++.+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344445688999999999999999999775 6889999998754333334456688999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999999754 367788889999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCC-CceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 554 AKFLKPGSS-NWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 554 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
+........ ......||+.|+|||++.... ++.++||||+||++|||++|+.||....... ....++
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--------~~~~i~ 260 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKIM 260 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH--------HHHHHH
Confidence 987643322 223467999999999986543 7889999999999999999999997432211 112222
Q ss_pred CC--CCCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 005864 629 DP--RLPLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQL 670 (673)
Q Consensus 629 ~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~~ 670 (673)
.. .+..+ .....+..+.+++..|+..++.+ ||+++|+++.
T Consensus 261 ~~~~~~~~~--~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 261 NHKNSLTFP--DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred cCCCcccCC--CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11 11111 11233456888999999844433 7899988763
No 128
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.4e-39 Score=330.24 Aligned_cols=258 Identities=23% Similarity=0.358 Sum_probs=201.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec-
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH- 472 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~- 472 (673)
.++|++.+.||+|+||.||+|... +++.||+|++..... ....+.+..|+.++.++ +||||++++++|..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 357899999999999999999532 357899999875422 22356778899999999 89999999998865
Q ss_pred CCeeeEEEecccCCChHHHHhcCCC-------------------------------------------------------
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGS------------------------------------------------------- 497 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 497 (673)
+...++++||+++|+|.+++.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 4567899999999999999864321
Q ss_pred ---CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccc
Q 005864 498 ---IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFG 572 (673)
Q Consensus 498 ---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~ 572 (673)
...++|..+..++.||+.||+|||+. +|+||||||+||++++++.++|+|||++..+...... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12578999999999999999999999 9999999999999999999999999999876433221 123345678
Q ss_pred cccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHH
Q 005864 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVAL 651 (673)
Q Consensus 573 y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 651 (673)
|+|||++.+..++.++|||||||++|||++ |..||......+. ....+....... .......++.+++.
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~l~~ 310 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--------FCRRLKEGTRMR--APEYATPEIYSIML 310 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--------HHHHHhccCCCC--CCccCCHHHHHHHH
Confidence 999999999999999999999999999998 9999864221110 001111100000 01122346889999
Q ss_pred HcccCCCCCCCCHHHHHHHhhC
Q 005864 652 LCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 652 ~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+||+.+|++||++.|+++.|++
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHH
Confidence 9999999999999999999863
No 129
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.1e-38 Score=320.71 Aligned_cols=255 Identities=24% Similarity=0.410 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
..+|.+.+.||+|+||+||++.. .++..+|+|.+.... ....+.+.+|++++.+++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 35688899999999999999964 235568999886532 234567899999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCC----------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 475 HSFLVYECLERGSLAEILSNDG----------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
..++||||+++++|.+++...+ ....+++.++..++.|++.||+|||+. +++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 9999999999999999997543 123489999999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~ 621 (673)
.++|+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~------- 230 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------- 230 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 999999999986533221 1122335678999999998889999999999999999998 899986432211
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+.......... ..+.++.+++.+||+.||.+|||+.|+.+.|+
T Consensus 231 -~~~~i~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 231 -VIECITQGRVLQRPR---TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred -HHHHHHcCCcCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 111111111111111 22346899999999999999999999998886
No 130
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.7e-38 Score=320.64 Aligned_cols=254 Identities=21% Similarity=0.369 Sum_probs=202.4
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|++.+.||+|+||+||+|.. .+++.||+|.+.... .......+.+|++++++++||||+++++++..++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4578889999999999999964 356789999987532 223456788999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCC--------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 477 FLVYECLERGSLAEILSNDGS--------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
++||||+++|+|.+++..... ...+++.+...++.|++.||+|||++ +++||||||+||++++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 999999999999999863321 23478899999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
++.+|++|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~----- 234 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE----- 234 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----
Confidence 99999999999986543221 1122345678999999988889999999999999999998 998986322110
Q ss_pred cccccccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 620 MNLSLNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 620 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.+.. .++.+. ..+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 235 ----~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 ----VIEMVRKRQLLPCSE----DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ----HHHHHHcCCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 0011111 111111 223458899999999999999999999999863
No 131
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.8e-39 Score=337.40 Aligned_cols=250 Identities=20% Similarity=0.287 Sum_probs=197.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|+.. +++.||+|++...........+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999764 688999999876543344456788999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999997653 478888899999999999999999 99999999999999999999999999975321000
Q ss_pred -----------------------------------------------CCceecccccccccccccccCCcCcchhHHHHH
Q 005864 562 -----------------------------------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594 (673)
Q Consensus 562 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 594 (673)
.......||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccccccccccccccccc--CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 005864 595 VLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL--DPRLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVCQ 669 (673)
Q Consensus 595 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~~ 669 (673)
|++|||++|+.||......+. ...+. ......+. ....+.++.+++.+|+ .+|++|++ ++|+++
T Consensus 236 vil~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLET--------QMKVINWQTSLHIPP--QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHH--------HHHHHccCCCcCCCC--cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999999974322111 11111 11111111 1122345677777765 59999987 777764
No 132
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.9e-39 Score=338.67 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=198.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|++.+.||+|+||+||+|+.. +++.||+|.+...........+.+.+|++++.+++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6889999999999999999764 689999999876443333445678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999997653 477888889999999999999999 99999999999999999999999999975321000
Q ss_pred -------------------------------------------CCceecccccccccccccccCCcCcchhHHHHHHHHH
Q 005864 562 -------------------------------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLAL 598 (673)
Q Consensus 562 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 598 (673)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0011246899999999999999999999999999999
Q ss_pred HHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC---CHHHHHH
Q 005864 599 EVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP---TMQTVCQ 669 (673)
Q Consensus 599 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~v~~ 669 (673)
||++|+.||......+...... ........+. ....+.++.+++.+|+ .+|.+|+ ++.|+++
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~------~~~~~~~~~~--~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVI------NWETTLHIPS--QAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHh------ccCccccCCC--CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999997443211100000 0001111111 1122345777888876 5999999 8888874
No 133
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2e-38 Score=315.18 Aligned_cols=251 Identities=25% Similarity=0.422 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.+|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++...+..++|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 35788899999999999999888888999998864322 13467889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 80 YMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred cCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 999999999997653 3588999999999999999999999 99999999999999999999999999998654322
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. .....++..|+|||.+.+..++.++||||||+++||+++ |+.||+.....+.. ....... ....+
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~--~~~~~---- 223 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----ESVSAGY--RLYRP---- 223 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----HHHHcCC--cCCCC----
Confidence 11 111223457999999998899999999999999999999 89998743221110 0011111 11111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+.++.+++.+||+.+|++|||+.|+++.|.
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 123456999999999999999999999999873
No 134
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=336.98 Aligned_cols=248 Identities=27% Similarity=0.466 Sum_probs=205.8
Q ss_pred CCccceeccCCcEEEEEEEe-CCCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 404 FDAEQCIGIGGQASVYRGEL-PSGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
....++||+|+||+||+|.+ +.|+ +||+|++... ...+...++.+|+..|.+++|||+++++|+|..+. ..+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 34468899999999999955 5554 5888887654 23345688999999999999999999999998776 789
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|++||+.|+|.|+++.++ ..+-....+.|..|||+||.|||++ ++|||||.++|||+.+...+||.|||+++...
T Consensus 775 vtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 999999999999999875 4566788899999999999999999 99999999999999999999999999999887
Q ss_pred CCCCCceecc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc--CCCCC
Q 005864 559 PGSSNWTEFA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL--DPRLP 633 (673)
Q Consensus 559 ~~~~~~~~~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 633 (673)
++...+.... -.+.|||-|.+....|+.++|||||||++||++| |..|++.+...+. .+.+ -.+++
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI---------~dlle~geRLs 920 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI---------PDLLEKGERLS 920 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh---------hHHHhccccCC
Confidence 7665554433 3578999999999999999999999999999998 9999986644322 1111 12345
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.|+.. ..+++.++.+||..|+..||+++++...+.
T Consensus 921 qPpiC----tiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 921 QPPIC----TIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred CCCCc----cHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 44444 445889999999999999999999988764
No 135
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.6e-38 Score=315.54 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=202.1
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.++.+++||||+++++++..++..++|+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 4689999999999999999976 4688999999864322 23456788999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +|+|||++|+||+++.++.++|+|||++..+...
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 86 EYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 999999999998754 3478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC-C
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP-S 636 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 636 (673)
........++..|+|||.+. ...++.++||||+||++|||++|+.||......+... ......+..+ .
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--------~~~~~~~~~~~~ 231 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--------LMSKSNFQPPKL 231 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--------eeecCCCCCCCC
Confidence 33334456888999999874 3457889999999999999999999986332211100 0001111100 0
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
......+..+.+++.+||+.+|++|||++++++.|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 01112345689999999999999999999998754
No 136
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.9e-38 Score=316.24 Aligned_cols=253 Identities=23% Similarity=0.414 Sum_probs=204.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+.|++.+.||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|||++++++++. .+..++++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 457889999999999999999988999999999865432 2457889999999999999999999874 45689999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++||||+|+||++++++.++++|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 80 EYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999876432 4688999999999999999999998 9999999999999999999999999999876532
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. ......++..|+|||++.+..++.++||||||+++||+++ |+.||......+. ....... .+.+.+
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~--~~~~~~--- 225 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV-----IQNLERG--YRMPRP--- 225 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH-----HHHHHcC--CCCCCC---
Confidence 22 1223345678999999988889999999999999999999 9999864321110 0000000 011111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus 226 -~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 -DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1233469999999999999999999999999874
No 137
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.3e-38 Score=314.56 Aligned_cols=252 Identities=24% Similarity=0.401 Sum_probs=202.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|.+.++..||+|++..... ..+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e 80 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 80 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEE
Confidence 56889999999999999999887777899999875322 23568899999999999999999998754 55789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+..+....
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 81 YMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred cCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999997643 24578999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SNW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ....++..|+|||+..+..++.++||||||+++|||++ |..||...... .....+.. ....+ ..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~-~~~~~--~~ 225 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVER-GYRMP--CP 225 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhc-CCCCC--Cc
Confidence 221 23345678999999988889999999999999999999 88888632211 01111111 11111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+|++.||++||++.++++.|++
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 2345568999999999999999999999999874
No 138
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-38 Score=342.62 Aligned_cols=255 Identities=24% Similarity=0.281 Sum_probs=203.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 474 (673)
..++|.+.+.||+|+||+||+|+. .+|+.||||.+...... ......+.+|+..+..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 346899999999999999999965 47999999998654332 234567889999999999999999988775432
Q ss_pred ----eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 475 ----HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 475 ----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 3679999999999999997542 234688999999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCC--CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGS--SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 550 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~--------~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME--------EVMHKT 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHH
Confidence 999998764322 1223457899999999999999999999999999999999999999743211 111111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ ....+.++.+++.+||+.||++||++.++++
T Consensus 258 ~~~~~~~~---~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 258 LAGRYDPL---PPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred hcCCCCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 21111111 1123446889999999999999999999975
No 139
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-38 Score=330.08 Aligned_cols=252 Identities=20% Similarity=0.260 Sum_probs=195.7
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|.+.+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++..+...++|+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 5799999999999999999966 468999999642 234678999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|++. ++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 163 e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 163 PRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred ecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 9986 68988887643 478899999999999999999999 9999999999999999999999999999754322
Q ss_pred -CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc--------------------
Q 005864 561 -SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------------------- 619 (673)
Q Consensus 561 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------------------- 619 (673)
........||+.|+|||++.+..++.++||||+||++|||++|+.||-...........
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 12233467999999999999989999999999999999999999886422111000000
Q ss_pred -ccccccccc---------CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 -MNLSLNEIL---------DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 -~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.. .+............+.++.+++.+||+.||++|||++|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 00000000111234567899999999999999999999985
No 140
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4e-38 Score=313.87 Aligned_cols=252 Identities=26% Similarity=0.448 Sum_probs=203.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||.||+|..+++..||+|.+...... .+.+.+|+.++++++|||++++++++. ....+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 468889999999999999999888889999998754322 356889999999999999999999885 456789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 81 YMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred ecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 9999999999976432 3578999999999999999999999 99999999999999999999999999998764332
Q ss_pred CCc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SNW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ....++..|+|||+..+..++.++||||||+++|||++ |..||......+ ....+.. ....+ ..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~-~~~~~--~~ 225 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--------VLEQVER-GYRMP--CP 225 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHc-CCCCC--CC
Confidence 211 12335668999999988889999999999999999999 889986432111 1111111 11111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+|+..+|++|||++++.+.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2334569999999999999999999999999874
No 141
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.7e-38 Score=319.47 Aligned_cols=254 Identities=24% Similarity=0.429 Sum_probs=203.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|.+.+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|++.+++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 45778899999999999999642 45678999876532 2335678899999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
.++||||+++++|.+++...+. ...+++..++.++.|++.|++|||++ +++||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 9999999999999999975431 23488999999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
++.++|+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----- 233 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE----- 233 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 99999999999976543221 1223446788999999998899999999999999999999 999986432211
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+......... ...+..+.+++.+||+.+|++|||+++|+++|+
T Consensus 234 ---~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 234 ---VIECITQGRVLERP---RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred ---HHHHHhCCCCCCCC---ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11111111111111 123346889999999999999999999999986
No 142
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.4e-38 Score=312.27 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=205.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||.||+|...+ ++.|++|.+.... ..+.+.+|++++++++||||+++++++..+...++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 578899999999999999998764 8899999986432 1678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 78 EYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred ecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 9999999999997643 4589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||++.+..++.++||||||+++|||++|+.||......+.... ......+.+. ...
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~----~~~ 223 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-----IPNKPPPTLS----DPE 223 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-----hccCCCCCCC----chh
Confidence 3333445678899999999888999999999999999999999999874322111000 0000011111 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 33456899999999999999999999986
No 143
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.1e-38 Score=319.07 Aligned_cols=262 Identities=22% Similarity=0.349 Sum_probs=200.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC---------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccce
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS---------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 466 (673)
++|++.+.||+|+||.||++.... ...||+|.++... .......+.+|++++.+++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 578999999999999999986532 2358999987542 22345679999999999999999999
Q ss_pred eeeeecCCeeeEEEecccCCChHHHHhcCCC---------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 005864 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGS---------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKN 537 (673)
Q Consensus 467 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 537 (673)
++++...+..++||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 9999999999999999999999999965321 12468899999999999999999999 99999999999
Q ss_pred eEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccccc
Q 005864 538 VLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISLL 613 (673)
Q Consensus 538 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~~ 613 (673)
|++++++.+||+|||++........ ......++..|+|||+..++.++.++||||||+++|||++ |..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 9999999999999999976533221 1122344678999999988889999999999999999998 66777643221
Q ss_pred cccccccccccccccCCCCC-CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 614 SSSSSNMNLSLNEILDPRLP-LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+... ...+..+.... .........+..+.+++.+||+.||++|||+++|++.|++
T Consensus 240 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 QVIE-----NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHH-----HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1000 00000000000 0000011123469999999999999999999999999874
No 144
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.7e-38 Score=318.68 Aligned_cols=263 Identities=22% Similarity=0.352 Sum_probs=204.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-----------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-----------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 463 (673)
..+|++.+.||+|+||.||+|.... +..||+|.+..... ....+.+.+|++++.+++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence 3578999999999999999986542 34689999875432 2346789999999999999999
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCC--------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGS--------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 535 (673)
+++++++..++..++|+||+++++|.+++..... ...+++..++.++.|++.||+|||+. +++|+||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 9999999999999999999999999999976531 12589999999999999999999999 999999999
Q ss_pred CCeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccc
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFIS 611 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~ 611 (673)
+||+++.++.++++|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999986543221 1223445778999999988889999999999999999998 677775322
Q ss_pred ccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 612 LLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.. ....... +.............+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 DQQVI-----ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred hHHHH-----HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11100 0000000 000000000111233569999999999999999999999999874
No 145
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6e-38 Score=315.72 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=197.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|++.+.||+|+||+||+|.+. +|+ .|++|.+... .......++..|+..+.+++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 46788899999999999999764 454 4777876532 222345678889999999999999999999864 456
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 78999999999999997643 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--C
Q 005864 557 LKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--R 631 (673)
Q Consensus 557 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 631 (673)
....... .....++..|+|||++.++.++.++||||||+++||+++ |+.||....... ..+.+.. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---------~~~~~~~~~~ 229 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---------VPDLLEKGER 229 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHHCCCc
Confidence 6443221 233456778999999998899999999999999999998 999986432211 0111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+. .....+.+++.+||..||++|||+.|+++.|.
T Consensus 230 ~~~~~----~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 230 LAQPQ----ICTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred CCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111 12335788999999999999999999999874
No 146
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.1e-38 Score=318.70 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-----------------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCccc
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-----------------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 464 (673)
++|++.+.||+|+||.||++... ++..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 46899999999999999998532 24468999886542 233457889999999999999999
Q ss_pred ceeeeeecCCeeeEEEecccCCChHHHHhcCCC--------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCC
Q 005864 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGS--------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536 (673)
Q Consensus 465 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 536 (673)
++++++..++..++||||+++|+|.+++..... ...+++.++..++.|++.|++|||+. +++|+||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 999999999999999999999999999976431 12477889999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCccccc
Q 005864 537 NVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISL 612 (673)
Q Consensus 537 Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~ 612 (673)
||++++++.++++|||++..+..... ......++..|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 99999999999999999986543221 1122334678999999888889999999999999999998 7788764322
Q ss_pred ccccccccccccccc-cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 613 LSSSSSNMNLSLNEI-LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.... ........ .....+.+. ..+..+.+++.+||+.||.+||++.+|++.|++
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVIEN-TGEFFRDQGRQVYLPKPA----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHH-HHHHHhhccccccCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111000 00000000 000111111 123568899999999999999999999999875
No 147
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.9e-38 Score=319.20 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=201.3
Q ss_pred CCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+|... ....+++|.+..... ......+.+|+.+++.++||||+++++++..++..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999999652 235788988765422 23456789999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCC---------------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 005864 477 FLVYECLERGSLAEILSNDG---------------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 535 (673)
++++||+++|+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 99999999999999986532 123578999999999999999999999 999999999
Q ss_pred CCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccc
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISL 612 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~ 612 (673)
+||++++++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999999765332221 122345678999999988889999999999999999998 9999864322
Q ss_pred ccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+ ..+........+ .....+.++.+++.+||+.+|++||+++|+++.|++
T Consensus 236 ~~---------~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 236 ER---------LFNLLKTGYRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred HH---------HHHHHhCCCCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 11 111111111110 011233468899999999999999999999999863
No 148
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.8e-38 Score=318.11 Aligned_cols=253 Identities=21% Similarity=0.263 Sum_probs=201.3
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+..+.||+|+||+||+|... +++.||+|.+.............+.+|+++++.++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999664 6899999998665433333455678899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++...+. ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999998875432 3589999999999999999999999 99999999999999999999999999997654322
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......|+..|+|||++.+..++.++|+||+|+++|||++|..||......... ......+....... ....
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~ 228 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR----EEVDRRVLETEEVY----SAKF 228 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHhhhcccccc----CccC
Confidence 223456899999999998889999999999999999999999998743211000 00011111111111 1123
Q ss_pred HHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 643 LISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
+.++.+++.+||+.||++||+ +.++++
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 345889999999999999999 666654
No 149
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.8e-38 Score=312.35 Aligned_cols=251 Identities=22% Similarity=0.293 Sum_probs=204.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|+||.||++... +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4778899999999999999765 68999999886432 22346778899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||||+||++++++.++++|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 79 YCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 999999999987543 24578899999999999999999999 99999999999999999999999999998765443
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||++.+..++.++|+||||+++|+|++|+.||........ ...+........+ ..
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~---~~ 223 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL--------ILKVCQGSYKPLP---SH 223 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH--------HHHHhcCCCCCCC---cc
Confidence 333456688999999999888899999999999999999999999874322111 1111111111111 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..+.+++.+||+.||++||++.+++..
T Consensus 224 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 224 YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 33458899999999999999999999875
No 150
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4e-38 Score=318.04 Aligned_cols=255 Identities=20% Similarity=0.304 Sum_probs=202.0
Q ss_pred CCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+|... +++.||+|+++... .....+.+.+|+.++..++||||+++++++...+..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 4667788999999999999753 35789999987542 223456788999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 477 FLVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
++++||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 99999999999999985321 123478888999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~ 620 (673)
+.+||+|||+++....... ......+++.|+|||++.++.++.++||||||+++|||++ |..||.....
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------- 232 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------- 232 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 9999999999886533221 1123345678999999988889999999999999999998 8888764221
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 621 NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
......+.+...... ..+.+..+.+++.+||+.+|.+||+++++++.|+.
T Consensus 233 ~~~~~~i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111222222222111 11334558899999999999999999999999863
No 151
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.3e-38 Score=330.41 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=204.0
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCS 471 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 471 (673)
...++|.+.+.||+|+||.||+|++. .++.||+|+++..... ...+.+.+|+.++.++. |||||+++++|.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 33456788899999999999999753 3468999999754222 23457889999999997 999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC------------------------------------------------------
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS------------------------------------------------------ 497 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 497 (673)
..+..++|+||+++|+|.++++..+.
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999975321
Q ss_pred -----------------------------------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCC
Q 005864 498 -----------------------------------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536 (673)
Q Consensus 498 -----------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 536 (673)
...+++.....++.|++.||+|||+. +++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 12367788899999999999999998 9999999999
Q ss_pred CeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccc
Q 005864 537 NVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLL 613 (673)
Q Consensus 537 Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~ 613 (673)
||++++++.+|++|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999986533221 1123456788999999998889999999999999999998 89998643211
Q ss_pred cccccccccccccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 614 SSSSSNMNLSLNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 614 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+. ..+.+.. +...+. ..+.++.+++.+||+.+|.+||+++|+++.|++
T Consensus 349 ~~--------~~~~~~~~~~~~~p~----~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 349 EQ--------FYNAIKRGYRMAKPA----HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HH--------HHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11 1111111 111111 224568999999999999999999999999874
No 152
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9.6e-38 Score=311.05 Aligned_cols=252 Identities=24% Similarity=0.421 Sum_probs=202.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|++|.||+|...++..+|+|.+..... ..+.+.+|+.++++++|||++++++++. .+..++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence 45888899999999999999887777899998764321 2456888999999999999999999875 456789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.++++... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 81 FMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999999997643 24578999999999999999999999 99999999999999999999999999998764332
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. .....++..|+|||+..+..++.++||||||+++|||++ |+.||......+ ....+.. ....+ ..
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~-~~~~~--~~ 225 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--------VLEQVER-GYRMP--CP 225 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHc-CCCCC--CC
Confidence 21 122345678999999988889999999999999999999 899986432111 0111111 11111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.||++||+++++++.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2344568999999999999999999999999874
No 153
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.1e-38 Score=318.59 Aligned_cols=258 Identities=21% Similarity=0.337 Sum_probs=202.3
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4568999999999999999999643 25589999876442 222345688899999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC-------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCce
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA 546 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 546 (673)
+..++||||+++|+|.+++...+. ....++..+..++.|++.|++|||++ +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 999999999999999999975321 23456778889999999999999999 99999999999999999999
Q ss_pred EEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
+++|||+++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||...... ..
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--------~~ 230 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------QV 230 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HH
Confidence 99999998865332211 122234678999999998899999999999999999998 78888643211 11
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.+....... ...+..+.+++.+||+.||++|||+.++++.|++
T Consensus 231 ~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 231 LKFVMDGGYLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred HHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1111111111111 1223469999999999999999999999998864
No 154
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.9e-38 Score=317.95 Aligned_cols=249 Identities=24% Similarity=0.375 Sum_probs=202.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++..+...++||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 5788899999999999999975 4689999998865322 23567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 97 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred cccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 999999999998653 378889999999999999999999 9999999999999999999999999998865444
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||.+.+..++.++|||||||++|||++|+.||......... ........... ....
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~~~--~~~~ 240 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-------YLIATNGTPEL--QNPE 240 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH-------HHHhcCCCCCC--CCcc
Confidence 33334456889999999998888999999999999999999999998643221110 00001111110 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||..+|++|||+.++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 34456889999999999999999999986
No 155
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.5e-38 Score=315.58 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=204.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|.+.+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.++..++||||+++++++..+.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 357888999999999999999664 24689999986542 2233567889999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCC-------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceE
Q 005864 475 HSFLVYECLERGSLAEILSNDGS-------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 547 (673)
..++||||+++|+|.+++..... ...+++..+..++.|++.|+.|||+. +++||||||+||++++++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 99999999999999999975432 12468899999999999999999999 999999999999999999999
Q ss_pred EecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
|+|||+++.+..... ......++..|+|||.+.+..++.++|||||||++||+++ |..||......+ ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--------~~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--------VL 231 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--------HH
Confidence 999999876543221 1223446788999999988889999999999999999998 999986322111 11
Q ss_pred ccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 625 NEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 625 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+... ....+.. .+.++.+++.+||+.+|++|||+.++++.|++
T Consensus 232 ~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 232 KFVIDGGHLDLPEN----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHhcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111111 1112221 24568999999999999999999999999874
No 156
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.7e-38 Score=321.49 Aligned_cols=260 Identities=18% Similarity=0.283 Sum_probs=199.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|+.+ +++.||+|.+...... .....+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 46888999999999999999765 6888999998654222 22345778999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 84 EYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred eCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 99986 8888887653 3478888999999999999999999 9999999999999999999999999999865443
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccccccccc-----
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLSLNEI----- 627 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~~----- 627 (673)
........+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+.... .....+..+
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 333344567899999998865 4588999999999999999999999964322111000 000000000
Q ss_pred -cCCCCCCC-C----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -LDPRLPLP-S----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -~~~~~~~~-~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+.. . ......+.++.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000 0 001123456889999999999999999999875
No 157
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.8e-38 Score=309.52 Aligned_cols=247 Identities=23% Similarity=0.390 Sum_probs=198.6
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCC
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 487 (673)
+.||+|+||.||+|..++++.||+|.+..... ......+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 36899999999999988899999999865432 2234568899999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc-ee
Q 005864 488 LAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW-TE 566 (673)
Q Consensus 488 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~ 566 (673)
|.+++.... ..+++..+..++.|++.|+.|+|+. +++||||+|+||++++++.+|++|||++.......... ..
T Consensus 79 L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 79 FLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 999987543 3578999999999999999999999 99999999999999999999999999997654322111 12
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
..++..|+|||++.+..++.++||||||+++||+++ |..||......... ....... +...+. ..+..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~-----~~~~~~~--~~~~~~----~~~~~ 222 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR-----EQVEKGY--RMSCPQ----KCPDD 222 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH-----HHHHcCC--CCCCCC----CCCHH
Confidence 234567999999988889999999999999999998 99998643221100 0000000 111111 23456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+++.+||+.+|++||++.|++++|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 899999999999999999999999885
No 158
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.1e-38 Score=316.18 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=204.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 474 (673)
.++|++.+.||+|+||.||+|.+.+ +..|++|++... ......+.+.+|+.++++++||||+++++++.. +.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 4678889999999999999997755 788999987643 233456778999999999999999999999876 56
Q ss_pred eeeEEEecccCCChHHHHhcCCCC-----ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 475 HSFLVYECLERGSLAEILSNDGSI-----KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
..++++||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.+|++
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999999765322 4589999999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 550 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
|||+++.+.+.... .....++..|+|||++.+..++.++||||||+++||+++ |+.||......+. ..
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---------~~ 230 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEM---------AA 230 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHH---------HH
Confidence 99999866433221 112345678999999988889999999999999999999 9999874322110 01
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+....... .....+.++.+++.+||+.||++|||+.++++.|+
T Consensus 231 ~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 231 YLKDGYRLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 010111110 01123446889999999999999999999999986
No 159
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.9e-38 Score=313.41 Aligned_cols=253 Identities=27% Similarity=0.453 Sum_probs=203.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+|++.+.||+|+||.||+|... .+..+|+|.++.... ....+.+..|+.++.+++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46888999999999999999763 234799998865422 234678899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..+
T Consensus 82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999997653 3578899999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCce---ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSNWT---EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
........ ...++..|+|||++.+..++.++||||||+++||+++ |..||......+. ...+.+. +.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~--------~~~~~~~~~~ 228 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV--------IKAIEEGYRL 228 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH--------HHHHhCCCcC
Confidence 54322111 1223567999999998889999999999999999886 9999864322111 1111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+ ...+..+.+++.+||+.+|.+||++.++++.|++
T Consensus 229 ~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 229 PAP----MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred CCC----CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 111 1234568899999999999999999999999864
No 160
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.3e-38 Score=315.44 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=201.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
+++|.+.+.||+|+||.||+|.+. .+..||+|.+.... .......+..|+.++++++|+||+++++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 467889999999999999999764 35679999876432 2223567889999999999999999999999988
Q ss_pred eeeEEEecccCCChHHHHhcCCC----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceE
Q 005864 475 HSFLVYECLERGSLAEILSNDGS----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EAR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~k 547 (673)
..++||||+++++|.+++...+. ...+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 99999999999999999976532 13589999999999999999999999 999999999999998654 599
Q ss_pred EecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
++|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||+....... .
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~--------~ 231 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV--------M 231 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH--------H
Confidence 9999999866322111 112233568999999998899999999999999999997 9999874321110 0
Q ss_pred cccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 625 NEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 625 ~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+. ..+...+. ..+..+.+++.+||+.+|++||++.+|++.|.+
T Consensus 232 ~~~~~~~~~~~~~----~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 232 EFVTGGGRLDPPK----GCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHcCCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 0010 01111111 223568899999999999999999999998864
No 161
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.7e-38 Score=316.39 Aligned_cols=257 Identities=23% Similarity=0.411 Sum_probs=204.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+++.+|+.++.+++||||+++++++..++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 357889999999999999999753 46789999987542 2234577999999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCC-------------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 005864 475 HSFLVYECLERGSLAEILSNDG-------------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 535 (673)
..++|+||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9999999999999999997431 113478889999999999999999999 999999999
Q ss_pred CCeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccc
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISL 612 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~ 612 (673)
+||++++++.++++|||++..+..... .......+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876543221 1122334667999999988899999999999999999997 8888753322
Q ss_pred ccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+ ....+.+...... ....+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~--------~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 EE--------VIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HH--------HHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11 1111112221110 11234568999999999999999999999999975
No 162
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.6e-38 Score=318.44 Aligned_cols=257 Identities=22% Similarity=0.370 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|.+.+.||+|+||.||+|.. .++..||+|.++... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 35688999999999999999964 235589999886542 223456789999999999 799999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999976432 3479999999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC
Q 005864 554 AKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 554 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
+......... .....++..|+|||.+.+..++.++||||+||++|||++ |..||......+. ..+....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--------~~~~~~~ 259 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--------FYKLIKE 259 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--------HHHHHHc
Confidence 9865433221 112345678999999998899999999999999999998 9999864322110 1111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..... .....+.++.+++.+||+.+|++|||+.|+++.|++
T Consensus 260 ~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 260 GYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 11110 011223468999999999999999999999999874
No 163
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=311.23 Aligned_cols=249 Identities=24% Similarity=0.405 Sum_probs=217.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.-|++.+.||+|.|..|-.|++- +|.+||||++.+...++. ....+.+|+..|+-++|||||++|.+...+...|+|.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 45888899999999999999764 799999999987765543 3567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-CCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL-SSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfg~~~~~~~ 559 (673)
|.-++|+|+|++-++. ..+.+..+.+++.||..|+.|+|+. .+|||||||+||.+ ..-|-||+.|||++..+.+
T Consensus 97 ELGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 9999999999998775 4588999999999999999999999 99999999999977 4568899999999998876
Q ss_pred CCCCceecccccccccccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
+. .....+|+..|.|||++.+..|+ +++||||+|||+|-++.|+.||+.. +..+.+--++|.++..|.
T Consensus 172 G~-kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA--------NDSETLTmImDCKYtvPs-- 240 (864)
T KOG4717|consen 172 GK-KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA--------NDSETLTMIMDCKYTVPS-- 240 (864)
T ss_pred cc-hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc--------cchhhhhhhhcccccCch--
Confidence 54 45678899999999999998886 5899999999999999999999843 234556678888887663
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..++|..||..||++|.+.++++.
T Consensus 241 --hvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 241 --HVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred --hhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 45567899999999999999999999864
No 164
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.3e-37 Score=310.76 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=203.3
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
++|+..+.||+|++|.||+|.. .+++.||+|.+...... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999976 46899999988654222 22235678899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++++|.+++...+ .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999997653 478888999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 559 PGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 559 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
...... ....++..|+|||.+.+..++.++||||+|+++|||++|+.||......... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--------~~~~~~~~~-- 225 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI--------FKIATQPTN-- 225 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH--------HHHhccCCC--
Confidence 322211 2345778999999999988999999999999999999999998643221110 001111000
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..........+.+++.+||..+|.+|||+.|+++.
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 01111234458899999999999999999999864
No 165
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.6e-38 Score=310.56 Aligned_cols=244 Identities=25% Similarity=0.380 Sum_probs=193.6
Q ss_pred eccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 410 IGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 410 ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
||+|+||.||+|.+. .+..||+|.+.... .....+.+.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 899999999999653 35679999886542 2334567999999999999999999999885 45678999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce-
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT- 565 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~- 565 (673)
+|.+++.... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+|++|||++...........
T Consensus 80 ~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 80 PLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9999997543 4588999999999999999999999 999999999999999999999999999986544332211
Q ss_pred --ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCCcchHH
Q 005864 566 --EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNIQD 641 (673)
Q Consensus 566 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 641 (673)
...++..|+|||.+.+..++.++||||||+++||+++ |+.||......+. ...+.. .....+ ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~----~~ 222 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV--------MSFIEQGKRLDCP----AE 222 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH--------HHHHHCCCCCCCC----CC
Confidence 1223568999999988889999999999999999996 9999874322111 000000 011111 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.++.+++.+||..+|++||++.+|.+.|++
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 34568899999999999999999999999864
No 166
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1e-37 Score=317.14 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=198.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||.||+|...+ +. .+++|.++... .....+.+.+|++++.++ +||||+++++++...+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 578899999999999999997653 43 47888876432 222356789999999999 7999999999999989999
Q ss_pred EEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 478 LVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+|+||+++|+|.+++.... ....+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 9999999999999997542 113478899999999999999999998 999999999999999999
Q ss_pred ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
.+||+|||++........ ......+..|+|||+..+..++.++|||||||++|||++ |..||......+ .
T Consensus 157 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--------~ 227 (297)
T cd05089 157 ASKIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--------L 227 (297)
T ss_pred eEEECCcCCCccccceec-cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------H
Confidence 999999999864321111 111223457999999988889999999999999999997 999986432211 0
Q ss_pred cccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 624 LNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 624 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....... ....+ ...+.++.+++.+||+.+|.+||+++++++.|+
T Consensus 228 ~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 228 YEKLPQGYRMEKP----RNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 11111 123346889999999999999999999998875
No 167
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.5e-38 Score=316.82 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=201.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|... +++.||+|.+...........+.+.+|+.++++++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677789999999999999664 689999999875433333344567889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++...+. ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999999865432 3588999999999999999999998 99999999999999999999999999997654322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||........ ............. .....
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-----~~~~~~~~~~~~~---~~~~~ 227 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-----REEVERLVKEVQE---EYSEK 227 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-----HHHHHhhhhhhhh---hcCcc
Confidence 22335689999999999998999999999999999999999999874211000 0001111110000 01112
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+.++.+++.+||+.||++||| ++|+++
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 3345889999999999999999 888875
No 168
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.6e-38 Score=318.72 Aligned_cols=257 Identities=22% Similarity=0.369 Sum_probs=204.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH 472 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 472 (673)
..++|++.+.||+|+||.||+|... ....+|+|.+..... .....++.+|++++.++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 3457888999999999999999763 246799998875422 23456788999999999 89999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcC-------------CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 473 PRHSFLVYECLERGSLAEILSND-------------GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
++..+++|||+++|+|.++++.. .....+++..+..++.|++.|++|||+. +++||||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence 99999999999999999999753 1235689999999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~ 616 (673)
+++++.+|++|||+++.+...... .....++..|+|||++.+..++.++|||||||++||+++ |..||......+.
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~- 243 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL- 243 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH-
Confidence 999999999999999876443211 122234578999999988899999999999999999997 9999864322111
Q ss_pred ccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 617 SSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 617 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....... ....+. ..+..+.+++.+||..||++|||+.|+++.|++
T Consensus 244 -------~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 244 -------FKLLKEGYRMEKPQ----NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred -------HHHHHcCCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 0000011 111111 223458899999999999999999999999863
No 169
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.6e-38 Score=331.68 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=198.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||+||+|... +++.||+|++.............+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999765 68999999987654334445677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999997653 478899999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCC
Q 005864 561 SS-----------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 605 (673)
Q Consensus 561 ~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 605 (673)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 10 0113468999999999999999999999999999999999999
Q ss_pred CCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 005864 606 PRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVCQ 669 (673)
Q Consensus 606 p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~~ 669 (673)
||........ ...+.. ..+..+... ..+.++.+++.+++ .||.+|++ ++|+++
T Consensus 235 Pf~~~~~~~~--------~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 235 PFCSETPQET--------YRKVMNWKETLVFPPEV--PISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCHHHH--------HHHHHcCCCceecCCCC--CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 9974322111 111111 111111111 12335777888876 49999985 566653
No 170
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.9e-38 Score=315.57 Aligned_cols=254 Identities=24% Similarity=0.412 Sum_probs=202.5
Q ss_pred cCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+|...+.||+|+||.||+|.. .++..+|+|.+.... ......+.+|+++++.++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 4677889999999999999953 246689999876532 2345689999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
.++++||+++|+|.+++...+. ...+++.++..++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 9999999999999999976432 13478999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~ 620 (673)
+.+||+|||++..+..... ......+++.|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~----- 233 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA----- 233 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-----
Confidence 9999999999976543221 1122334678999999998899999999999999999998 8999853222111
Q ss_pred ccccccccCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 621 NLSLNEILDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 621 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
........ ...+ ...+..+.+++.+||+.||.+||+++|+.+.|++
T Consensus 234 ---~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 ---IECITQGRELERP----RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ---HHHHHcCccCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11111111 1111 1233458899999999999999999999999874
No 171
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9.2e-38 Score=315.35 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=199.3
Q ss_pred CCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Cee
Q 005864 404 FDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHS 476 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 476 (673)
|...+.||+|+||+||++.. .+++.||+|.++.... ......+.+|++++++++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 47889999999999988642 3688999999865422 22456788999999999999999999998653 467
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++... .+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 8999999999999999764 389999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc-cccc-----cccccccccc
Q 005864 557 LKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL-SSSS-----SNMNLSLNEI 627 (673)
Q Consensus 557 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~-----~~~~~~~~~~ 627 (673)
....... .....++..|+|||.+.+..++.++||||||+++|||++|..||...... .... ........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6443221 11233566799999998888999999999999999999999997632210 0000 0000011111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.....+ .....+.++.+++..||+.+|++|||+++++++|++
T Consensus 237 ~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 237 LERGMRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred hhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 11111111 111234569999999999999999999999999863
No 172
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5e-38 Score=315.47 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=200.1
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC---
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP--- 473 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--- 473 (673)
.+.+.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 35677888999999999999999764 68899999986432 1245678899999998 799999999998653
Q ss_pred ---CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 474 ---RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 474 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
...++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 457899999999999999986432 4588999999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
||++..............|+..|+|||++. ...++.++||||+||++|||++|+.||........... ..
T Consensus 155 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~-----~~ 229 (272)
T cd06637 155 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-----IP 229 (272)
T ss_pred CCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-----Hh
Confidence 999987654333444567889999999886 34578899999999999999999999864322111100 00
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ ....+.++.+++.+||..+|.+|||+.|+++
T Consensus 230 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNPAPRLK-----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCCCCCC-----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00001111 1123346889999999999999999999975
No 173
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.9e-38 Score=310.39 Aligned_cols=246 Identities=26% Similarity=0.399 Sum_probs=195.3
Q ss_pred eeccCCcEEEEEEEe---CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQASVYRGEL---PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.||+|+||.||+|.+ ++++.+|+|+++... .+....+++..|+.+++.++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999965 357889999886442 23345678999999999999999999999885 4567899999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc-
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW- 564 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 564 (673)
|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||++..+.......
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 80 GPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999997643 478899999999999999999999 99999999999999999999999999998764433221
Q ss_pred --eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 565 --TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 565 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
....++..|+|||.+....++.++||||||+++|||++ |+.||......+. ....... ...+.+. .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~i~~~--~~~~~~~----~ 222 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV-----TQMIESG--ERMECPQ----R 222 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHCC--CCCCCCC----C
Confidence 12233578999999988889999999999999999998 9999874322110 0001100 0111121 2
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.++.+++.+||+.||++||++++|++.|++
T Consensus 223 ~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 223 CPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 34568899999999999999999999999874
No 174
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.4e-37 Score=311.45 Aligned_cols=253 Identities=28% Similarity=0.486 Sum_probs=202.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CC---CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|+..+.||+|+||.||+|..+ ++ ..+|+|.+.... .....+.+..|++++.+++|||++++.+++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 46788899999999999999764 33 379999886542 2234567899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 IITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999999997643 4588999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCCc-e--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSNW-T--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~~-~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
....... . ....+..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--------~~~~~i~~~~~~ 229 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------EVMKAINDGFRL 229 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhcCCCC
Confidence 4332211 1 1223457999999988889999999999999999997 99998632211 111111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+ .+.+.++.+++.+||+.+|++||++.+|++.|++
T Consensus 230 ~~~----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 230 PAP----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 111 1234568999999999999999999999999874
No 175
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.6e-37 Score=308.88 Aligned_cols=253 Identities=24% Similarity=0.309 Sum_probs=207.8
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||.|+||.||.++. .+++.+++|.+...... ....+.+.+|++++++++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 478889999999999999965 46899999988654322 2346678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ...+++.++..++.|+++|++|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999998653 24578999999999999999999999 99999999999999999999999999998765444
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||...+..++.++||||||+++|||++|..||+..... .....+......... ..
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~ 224 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--------NLVVKIVQGNYTPVV---SV 224 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCc---cc
Confidence 3344567899999999998888899999999999999999999998643221 111122222222111 23
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
.+..+.+++.+||+.+|.+||++.++++.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 345688999999999999999999998753
No 176
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.7e-38 Score=314.51 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=199.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|+..+.||+|+||+||+|.+ ++|+ .||+|.+.... .....+++.+|+.++..++||||+++++++... ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~ 83 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV 83 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence 5688889999999999999975 3454 48999886542 233456788999999999999999999999754 46
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 79999999999999997643 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
........ ....++..|+|||...+..++.++|||||||++|||++ |..||+....... ....... ...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~--~~~~ 231 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-----PDLLEKG--ERLP 231 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCC--CcCC
Confidence 65332221 12234678999999988889999999999999999998 8999863221100 0000000 0111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+ ...+.++.+++.+||+.||++||++.++++.|+
T Consensus 232 ~~----~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 232 QP----PICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 123446889999999999999999999998875
No 177
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.5e-38 Score=322.13 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=199.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+++.. +++.||+|.+...........+.+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46889999999999999999765 68999999987543334445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999997643 3478889999999999999999999 9999999999999999999999999999876443
Q ss_pred CCC-ceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC--CCC
Q 005864 561 SSN-WTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRL 632 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 632 (673)
... .....||+.|+|||++.. ..++.++||||+||++|||++|+.||......+.. ..+.. ...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~--------~~i~~~~~~~ 227 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY--------GKIMNHKEHF 227 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH--------HHHHcCCCcc
Confidence 322 233568999999999863 45788999999999999999999998743221111 11111 111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCC--CCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPE--SRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~--~Rps~~~v~~ 669 (673)
..+. .....+..+.+++.+|+..+++ .||+++++++
T Consensus 228 ~~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 228 QFPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cCCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 1111 1112344578888887765443 3789998875
No 178
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-37 Score=317.78 Aligned_cols=256 Identities=22% Similarity=0.363 Sum_probs=203.5
Q ss_pred hcCCCccceeccCCcEEEEEEEe--------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL--------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
..+|.+.+.||+|+||.||+|+. .++..||+|.+.... .....+.+.+|+.++..+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 45788899999999999999964 134579999886532 223457789999999999 8999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
..+..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+. +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999999976421 23578899999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
++++++.+||+|||+++.+...... .....+++.|+|||++.+..++.++||||||+++|||++ |..||......+.
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 9999999999999999876443221 122335678999999988889999999999999999998 7888764322111
Q ss_pred cccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 616 SSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+... ....+ ...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 249 --------~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 249 --------FKLLKEGHRMDKP----ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred --------HHHHHcCCcCCCC----CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 0011111 11111 1234568899999999999999999999999863
No 179
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2e-37 Score=311.06 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=197.2
Q ss_pred CCccceeccCCcEEEEEEEeCC-CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------C
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------R 474 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 474 (673)
|.+.+.||+|+||.||+|...+ +. .||+|.++.... .....+.+..|++++..++||||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999997754 33 689998865422 233467889999999999999999999987432 2
Q ss_pred eeeEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
..++++||+++|+|.+++.... ....+++.....++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 4689999999999999885322 224578999999999999999999998 9999999999999999999999999
Q ss_pred cceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc
Q 005864 552 GIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 552 g~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
|+++.+...... .....+++.|+|||+..+..++.++||||||+++|||++ |+.||......+. ...+.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--------~~~~~ 228 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI--------YDYLR 228 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--------HHHHH
Confidence 999876433221 122345678999999998899999999999999999999 8889864322110 11111
Q ss_pred CC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 629 DP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 629 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.. ....+. ..+..+.+++.+||+.||++|||+.++++.|++
T Consensus 229 ~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 229 QGNRLKQPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred cCCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 111111 223458899999999999999999999999874
No 180
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.2e-37 Score=312.86 Aligned_cols=262 Identities=26% Similarity=0.376 Sum_probs=200.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CC
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 474 (673)
..|++.+.||+|+||+||+|.. .+++.||+|.+.... ....+.+.+|++++.+++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4688889999999999999964 358899999986542 2345778999999999999999999998754 34
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+++|+|.+++...+ ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 6789999999999999997643 3588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc--cccccccc-----ccc
Q 005864 555 KFLKPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL--SSSSSNMN-----LSL 624 (673)
Q Consensus 555 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~-----~~~ 624 (673)
.......... ....++..|+|||+..+..++.++||||||+++|||++|..|+...... ........ ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 8764433211 1122345699999998888999999999999999999988775422111 00000000 000
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 625 NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.+......+ .....+.++.+++.+||+.+|++|||++|+++.|++
T Consensus 236 ~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 236 IELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred HHHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 01111111111 111233468999999999999999999999999874
No 181
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.3e-38 Score=317.48 Aligned_cols=254 Identities=30% Similarity=0.459 Sum_probs=202.2
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++++.||+|+||+||+++.. +++.||+|.+........ ......+|+.++++++||||+++++++.+....++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccccccccccccccccccccccccccc
Confidence 567899999999999999776 467899999987644332 233445699999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++... ..+++..+..++.|+++||++||+. +++|+||||+||++++++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 80 CPGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp ETTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred ccccccccccccc---ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999833 4589999999999999999999999 999999999999999999999999999987533344
Q ss_pred Cceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 563 NWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......++..|+|||.+. +..++.++||||+|+++|+|++|..||........ .....+...............
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ-----LEIIEKILKRPLPSSSQQSRE 228 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH-----HHHHHHHHHTHHHHHTTSHTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhh-----hhhhhhcccccccccccccch
Confidence 445567899999999998 88899999999999999999999999874411110 000111110000000000001
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.+++.+||+.||++||++.++++
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1256999999999999999999999985
No 182
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.9e-37 Score=310.51 Aligned_cols=256 Identities=23% Similarity=0.286 Sum_probs=199.1
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+++.+.....||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++..++..+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34556666788999999999999754 67889999876542 223567899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKF 556 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 556 (673)
+|+||+++++|.+++.........++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999998643211127788889999999999999999 9999999999999976 67899999999987
Q ss_pred cCCCCCCceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
............+++.|+|||++.+.. ++.++||||||+++|+|++|+.||........ ...........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~- 231 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA------AMFKVGMFKIHP- 231 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh------hHhhhhhhccCC-
Confidence 644333334456789999999986543 78899999999999999999999863211000 000000000101
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........++.+++.+||+.+|++|||+.|+++
T Consensus 232 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 232 --EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111223456889999999999999999999986
No 183
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1e-37 Score=312.65 Aligned_cols=254 Identities=29% Similarity=0.493 Sum_probs=202.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CC---CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
..|++.+.||+|+||.||+|... ++ ..||+|.+.... .....++|..|+.+++.++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 34778899999999999999764 23 369999986542 2334678999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|+||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999997653 3588999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCc--ee-cc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC
Q 005864 558 KPGSSNW--TE-FA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 558 ~~~~~~~--~~-~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
....... .. .. .+..|+|||++.+..++.++||||||+++||+++ |..||......+. ...... +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~-----~~~i~~--~~~ 229 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----INAIEQ--DYR 229 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHH-----HHHHHc--CCc
Confidence 4322211 11 11 2457999999998899999999999999999886 9999864322110 000000 111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.+ .+.+..+.+++.+||+.+|.+||+++++++.|++
T Consensus 230 ~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 230 LPPP----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred CCCc----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 2222 1234568899999999999999999999999864
No 184
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1e-37 Score=315.46 Aligned_cols=262 Identities=20% Similarity=0.260 Sum_probs=200.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|++|.||+|... +|+.||+|++...... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 4778899999999999999765 6899999998654222 2234678889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|++ ++|.+++........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 998 58999987654445689999999999999999999999 99999999999999999999999999998664433
Q ss_pred CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccc---cc--c
Q 005864 562 SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLN---EI--L 628 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~---~~--~ 628 (673)
.......+++.|+|||.+.+. .++.++||||||+++|||++|+.||.......... ......+. .. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 333344568899999987654 47889999999999999999999986432111000 00000000 00 0
Q ss_pred CCCCCC-----CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DPRLPL-----PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+. ........+.++.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 00001123456789999999999999999999975
No 185
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-37 Score=314.72 Aligned_cols=249 Identities=25% Similarity=0.391 Sum_probs=203.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .+|+.||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 6789999999999999999976 4799999999865322 23466889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred cccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 999999999998653 368889999999999999999999 9999999999999999999999999999876554
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||...+..++.++||||||+++|++++|+.||........ .........+ ......
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--------~~~~~~~~~~-~~~~~~ 239 (297)
T cd06656 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--------LYLIATNGTP-ELQNPE 239 (297)
T ss_pred ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--------eeeeccCCCC-CCCCcc
Confidence 4333445688899999999988899999999999999999999999864322111 0000000000 001112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||+.+|++||+++++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 33455889999999999999999999986
No 186
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.3e-38 Score=319.36 Aligned_cols=256 Identities=23% Similarity=0.354 Sum_probs=201.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
.++|.+.+.||+|+||.||+|... ++..+|+|.++... ......++..|++++..+ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 356889999999999999999652 23579999987542 223356788899999999 7999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
..+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999976432 13488999999999999999999998 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
++++++.+||+|||.+.......... ....+++.|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 99999999999999987654322111 11223468999999988889999999999999999998 8888763221100
Q ss_pred cccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...... ......+ ...+.++.+++.+||+.+|++|||+.+|++.|+
T Consensus 252 -----~~~~~~--~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 252 -----FKLLKE--GHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred -----HHHHHc--CCCCCCC----CcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 000000 0011111 123456889999999999999999999999886
No 187
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.1e-37 Score=311.13 Aligned_cols=254 Identities=23% Similarity=0.377 Sum_probs=200.3
Q ss_pred CCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe----
Q 005864 404 FDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH---- 475 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 475 (673)
|.+.+.||+|+||.||+|.... +..||+|+++..... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 5678899999999999997642 468999998754222 3345678999999999999999999999866544
Q ss_pred --eeEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 476 --SFLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 476 --~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
.++++||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 789999999999999985432 224588999999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 551 FGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 551 fg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
||+++.+...... .....++..|+|||++.+..++.++||||||+++|||++ |..||......+ .....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--------~~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--------IYDYL 228 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHH
Confidence 9999876443221 112334678999999988889999999999999999999 889886432211 11111
Q ss_pred cCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.... ...+ ...+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 229 ~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 229 RHGNRLKQP----EDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HcCCCCCCC----cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 1111 1111 1234568999999999999999999999999864
No 188
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.2e-37 Score=308.87 Aligned_cols=253 Identities=25% Similarity=0.481 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|.+.+.||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++++|||++++++++..+...++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 467889999999999999999888888999999875322 2467889999999999999999999999889999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.++++|||.+......
T Consensus 81 e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 81 EYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred eccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999976532 4589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSR 637 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 637 (673)
... ......+..|+|||.+.+..++.++||||+|+++||+++ |+.||...... .....+... ..+.+.
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~- 227 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGYRMPRPP- 227 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCCC-
Confidence 111 112234568999999998889999999999999999998 99998632211 111111111 111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.++.+++.+|+..+|++||+++++.+.|+.
T Consensus 228 ---~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 228 ---NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 124468999999999999999999999999874
No 189
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.3e-37 Score=307.85 Aligned_cols=249 Identities=28% Similarity=0.465 Sum_probs=200.2
Q ss_pred ceeccCCcEEEEEEEeCC--CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELPS--GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|++|.||+|.+.+ ++ .||+|.+...... ...+.+.+|+.++++++||||+++++++.. ...++|+||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999997643 33 6999998765433 457789999999999999999999999988 8899999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
++|+|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999987643 4689999999999999999999999 9999999999999999999999999999876543221
Q ss_pred c---eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 564 W---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 564 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||......+... .... .......+
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~-~~~~~~~~---- 223 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILK-----KIDK-EGERLERP---- 223 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHh-cCCcCCCC----
Confidence 1 12346788999999998899999999999999999998 999986332211100 0000 01111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++||++.++++.|.+
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 1234568899999999999999999999999864
No 190
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=322.82 Aligned_cols=245 Identities=25% Similarity=0.419 Sum_probs=202.8
Q ss_pred ccceeccCCcEEEEEEEeC--CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 406 AEQCIGIGGQASVYRGELP--SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
..+.||+|+||.|++|.|. +|+ .||||.+....... ....|.+|+.+|.+++|||++++||+..+ ....+|||
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 4577999999999999774 455 58999987654332 57899999999999999999999999987 67889999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
.++.|+|.+.|++ .....|-......++.|||.||.||..+ ++|||||..+|+++-....|||+|||+++-+....
T Consensus 191 LaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999999998 3346688888889999999999999999 99999999999999999999999999999886554
Q ss_pred CCce---ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC--CCCCCC
Q 005864 562 SNWT---EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLP 635 (673)
Q Consensus 562 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 635 (673)
..+. ...-.+.|+|||.+....++.+||||+|||++|||+| |+.||-+...... -+.+| .+++.+
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI---------L~~iD~~erLpRP 337 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI---------LKNIDAGERLPRP 337 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH---------HHhccccccCCCC
Confidence 4432 2334678999999999999999999999999999998 8889865433221 11222 234444
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
. .+++.++++++.||..+|++|||+..+.+.
T Consensus 338 k----~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 338 K----YCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred C----CChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 3 345569999999999999999999999743
No 191
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2e-37 Score=308.10 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||.|+||.||+|... |+.||+|.+..... ..+++.+|+.++.+++|+||+++++++...+..++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 357888999999999999999874 88999999875432 4677899999999999999999999999889999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999976542 3589999999999999999999999 9999999999999999999999999999866322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. ....+..|+|||++.++.++.++||||||+++||+++ |..||......+. ...... +.+...+
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~--~~~~~~~---- 221 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPHVEK--GYRMEAP---- 221 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHhc--CCCCCCc----
Confidence 11 2334568999999988889999999999999999997 9999863321110 000000 0011111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||..+|++|||+.+++++|.+
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1234568899999999999999999999999864
No 192
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.2e-37 Score=310.19 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=190.5
Q ss_pred ceeccCCcEEEEEEEeCC---CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIGGQASVYRGELPS---GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
+.||+|+||.||+|...+ +..+|+|.+..... ......+.+|+.++++++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 358999999999997643 45799998765432 2234578899999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 485 RGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 485 ~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+|+|.+++..... ....++..+..++.|++.|++|||+. +++|+||||+||+++.++.+|++|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 9999999975432 23467788889999999999999999 999999999999999999999999999875432221
Q ss_pred --CceecccccccccccccccC-------CcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCC
Q 005864 563 --NWTEFAGTFGYVAPELAYTM-------KVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 563 --~~~~~~~~~~y~aPE~~~~~-------~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
......++..|+|||++... .++.++||||||+++|||++ |+.||......+...............+..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL 235 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc
Confidence 11234567889999987532 35789999999999999996 999986432211100000000001111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. ...+..+.+++..|| .+|++|||++||++.|+
T Consensus 236 ~------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 K------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 112334778999999 68999999999999885
No 193
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-38 Score=314.98 Aligned_cols=254 Identities=26% Similarity=0.440 Sum_probs=205.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 478 (673)
....|++.+.||.||.+.||++...+.+.||+|++.... .+.....-|..|+..|.+++ |.+||++++|-..++..|+
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 346788999999999999999999888999999876543 34456788999999999994 9999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||-+ .+|..+|++... ....| .+..+.+|++.|+.+.|++ ||||.||||.|+++-. |.+||+|||.|..+.
T Consensus 438 vmE~Gd-~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred Eeeccc-ccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 999754 499999988753 22344 6788999999999999999 9999999999999984 699999999999887
Q ss_pred CCCCC--ceecccccccccccccccCC-----------cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 559 PGSSN--WTEFAGTFGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 559 ~~~~~--~~~~~~~~~y~aPE~~~~~~-----------~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
++... ...-+||+.||+||.+.... .+.++||||+|||+|+|+.|+.||..... ....+.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~aKl~ 583 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIAKLH 583 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHHHHH
Confidence 76543 24568999999999986432 55789999999999999999999974431 223455
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.-..+....... .++.++++.||+.||++|||..++++
T Consensus 584 aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 56666432222111111 12889999999999999999999985
No 194
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.5e-38 Score=318.78 Aligned_cols=254 Identities=23% Similarity=0.378 Sum_probs=198.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
.++|++.+.||+|+||.||+|.+. +|. .+|+|.++... .....+.+.+|++++.++ +||||+++++++..++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 357888999999999999999764 454 45777765432 223457788999999999 899999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 477 FLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
++|+||+++|+|.++++..+. ...+++.++..++.|++.|++|||+. +++||||||+||+++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 999999999999999975431 13578999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNL 622 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~ 622 (673)
+.+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||+| |..||......+.
T Consensus 161 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------- 232 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------- 232 (303)
T ss_pred CcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH-------
Confidence 999999999986332111 1111234567999999988889999999999999999998 9999863321110
Q ss_pred ccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 623 SLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 623 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+... ....+ ...+.++.+++.+||+.+|++||+++++++.|+
T Consensus 233 -~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 233 -YEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred -HHHHhcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0011010 11111 122346889999999999999999999998875
No 195
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.2e-37 Score=312.83 Aligned_cols=251 Identities=21% Similarity=0.342 Sum_probs=201.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|++.+.||+|+||.||+|... +++.|++|.+... .....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 56889999999999999999775 5899999998653 2334677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|..++.+.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 89 EFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred ecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999998886543 3588999999999999999999999 9999999999999999999999999998765433
Q ss_pred CCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 SSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
........++..|+|||++. ...++.++|||||||++|||++|+.||......+.. ........+....
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~- 237 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-----LKIAKSEPPTLSQ- 237 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH-----HHHhcCCCccCCC-
Confidence 33334556888999999884 345688999999999999999999998643221100 0000000111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.+|++||++.|+++
T Consensus 238 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 238 ---PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1123446889999999999999999999975
No 196
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2e-37 Score=308.73 Aligned_cols=253 Identities=22% Similarity=0.385 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 46788999999999999999988788889999876432 235678899999999999999999999887 7789999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ...+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.+|++|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 80 EFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999999997643 24578899999999999999999998 9999999999999999999999999999765432
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... .....++..|+|||++....++.++|+||||+++|++++ |+.||........ .+.+......+ .
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---------~~~~~~~~~~~--~ 224 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---------IRALERGYRMP--R 224 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---------HHHHhCCCCCC--C
Confidence 221 122345678999999988889999999999999999999 8999864321110 00111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 225 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 12334568899999999999999999999999874
No 197
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.3e-38 Score=324.66 Aligned_cols=243 Identities=22% Similarity=0.227 Sum_probs=191.0
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeecCCeeeEEEecccC
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
||+|+||+||+|+.. +|+.||||++.............+..|..++... +||||+++++++.+++..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999765 6899999998654333333345556677777665 699999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.++|+|||++...........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 9999998765 3478899999999999999999999 999999999999999999999999999875433333344
Q ss_pred ecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
...||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+.......+.. ..+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~~~~---~~~~ 223 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--------QMYRNIAFGKVRFPKN---VLSD 223 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--------HHHHHHHcCCCCCCCc---cCCH
Confidence 56789999999998754 4789999999999999999999998643211 1111222222222211 1234
Q ss_pred HHHHHHHHcccCCCCCCC----CHHHHHH
Q 005864 645 SILEVALLCLEESPESRP----TMQTVCQ 669 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rp----s~~~v~~ 669 (673)
++.+++.+||+.||.+|| ++.|+++
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 578899999999999998 5666554
No 198
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5e-37 Score=308.85 Aligned_cols=249 Identities=26% Similarity=0.405 Sum_probs=204.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|+..+.||+|+||.||+|.+. +++.||+|.+..... ......+.+|+.++++++||||+++++++.++...++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35777889999999999999765 588999998865422 234678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... .+++.+...++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 82 EYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred ecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999998753 378888999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||++.+..++.++||||||+++|||++|+.||........ . ....... +.....
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~-~~~~~~~--~~~~~~ 223 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--------L-FLIPKNN--PPTLTG 223 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------h-hhhhcCC--CCCCch
Confidence 3333445678899999999888899999999999999999999999864322110 0 0011010 112233
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+..+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 456679999999999999999999999753
No 199
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-37 Score=315.33 Aligned_cols=249 Identities=26% Similarity=0.403 Sum_probs=202.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||.|++|.||+|.. .+|+.|++|.+.... ....+.+.+|+..++.++|||++++++++..++..++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 4688999999999999999965 579999999886532 223567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 96 EYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 999999999998653 478999999999999999999999 9999999999999999999999999998866544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||.+.+..++.++|||||||++|+|++|+.||......+... .......+.+..+ .
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~-----~~~~~~~~~~~~~----~ 239 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----LIATNGTPELQNP----E 239 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhcCCcccCCc----c
Confidence 333334567889999999988889999999999999999999999987543211100 0000000111111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||..||++||++.++++
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 23345889999999999999999999985
No 200
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.4e-37 Score=310.83 Aligned_cols=248 Identities=26% Similarity=0.424 Sum_probs=203.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||.|++|.||+|... +++.||+|.+.... .......+.+|+++++.++|||++++++++.++...++|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 5788899999999999999765 68999999986542 22345678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||+++......
T Consensus 80 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 80 YCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 99999999999764 588999999999999999999999 99999999999999999999999999998876543
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......++..|+|||++.+..++.++||||||+++|||++|+.||......... ........+... . ..
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~---~--~~ 222 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL-----FLIPKNNPPSLE---G--NK 222 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH-----HHhhhcCCCCCc---c--cc
Confidence 3344556788999999999888999999999999999999999998643211100 000000011111 0 01
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||..+|++|||++++++
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3456889999999999999999999975
No 201
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.1e-37 Score=312.56 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=198.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++.+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|+++++.++|||++++++++..++..++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 567788999999999999775 57788999875432 23466788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 84 CAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred cCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 99999999886532 4589999999999999999999999 999999999999999999999999999876543333
Q ss_pred Cceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 563 NWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
......++..|+|||++. +..++.++|||||||++|||++|+.||......+.... ......+....+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~-- 231 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLK-----IAKSEPPTLAQP-- 231 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHH-----HhhcCCCCCCCc--
Confidence 334456889999999874 44577899999999999999999999874332111000 000001111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||+.||.+||++.++++
T Consensus 232 --~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 232 --SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 123456889999999999999999999975
No 202
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-37 Score=310.66 Aligned_cols=252 Identities=24% Similarity=0.364 Sum_probs=199.5
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++..++..++|+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 4677788999999999999966 468999999986542 223456788999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ .+++.++..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 86 EFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999999987653 478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
........|+..|+|||++. ...++.++||||+||++|||++|+.||............ .......+...
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~---- 232 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM---TKSNFQPPKLK---- 232 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh---hccCCCCCccc----
Confidence 33334557899999999874 455888999999999999999999997532211100000 00000000010
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+.+++.+||+.+|++||+++++++
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 01122345889999999999999999999975
No 203
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2e-37 Score=321.10 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=198.7
Q ss_pred cCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC-
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP- 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~- 473 (673)
++|++.+.||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|+.++.++ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 5789999999999999999963 3578999999875422 23356788999999999 689999999988654
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
...++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 567899999999999999865321
Q ss_pred --------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC--Cceec
Q 005864 498 --------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS--NWTEF 567 (673)
Q Consensus 498 --------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~ 567 (673)
...+++..+..++.|+++|++|||+. +|+||||||+||++++++.+|++|||++........ .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 12367888899999999999999999 999999999999999999999999999986533222 11223
Q ss_pred ccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCCcchHHHHHH
Q 005864 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNIQDKLIS 645 (673)
Q Consensus 568 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 645 (673)
.++..|+|||.+.+..++.++||||||+++|||++ |..||........ ....... .....+. ..+.+
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~ 310 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------FCRRLKEGTRMRAPD----YTTPE 310 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-------HHHHHhccCCCCCCC----CCCHH
Confidence 45678999999988889999999999999999997 9999864321110 0000000 0111111 12345
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+++..||+.||++|||+.|+++.|+
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 889999999999999999999999886
No 204
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-37 Score=321.27 Aligned_cols=254 Identities=22% Similarity=0.275 Sum_probs=200.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+++.. +++.||+|.+.............+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999765 68899999987643333344566889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999998643 3578888999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC--CCC
Q 005864 561 SSN-WTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRL 632 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 632 (673)
... .....|++.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+.. .++
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~--------~~~i~~~~~~~ 227 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGKIMNHEERF 227 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH--------HHHHHcCCCcc
Confidence 322 233568999999998865 4678899999999999999999999974322111 111111 111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
+.+. .....+.++.+++.+|+..++.+ |++++++++
T Consensus 228 ~~p~-~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 QFPS-HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCC-ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 2111 11233456888999999876544 468888764
No 205
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.8e-37 Score=305.64 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=203.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 480 (673)
+|++.+.||+|++|.||+|... +++.||+|++..... .....+.+.+|++++++++|||++++++.+.. +...++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 4788999999999999999765 578999999865322 22345678899999999999999999998764 44678999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 9999999999997643 24589999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||+..+..++.++||||+|++++||++|+.||+...... .........++. ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~~---~~~ 224 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS--------LVYRIIEGKLPP---MPK 224 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHhcCCCC---Ccc
Confidence 344445668899999999999999999999999999999999999987432111 111111112211 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.+|++||++.++++
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 34456899999999999999999999986
No 206
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.5e-37 Score=306.37 Aligned_cols=250 Identities=28% Similarity=0.452 Sum_probs=201.3
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+...... ...+.+|++++++++|||++++++++......++|+|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 467788999999999999998877889999988654322 3568899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 80 FMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred cCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999999997643 3478899999999999999999999 99999999999999999999999999998654322
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
.. .....++.+|+|||++.++.++.++||||||+++|||++ |+.||......+ ....+... +...+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 224 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--------VVETINAGFRLYKPR-- 224 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--------HHHHHhCCCCCCCCC--
Confidence 11 122334678999999988889999999999999999998 999986322110 00111000 111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 225 --~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 --LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12346899999999999999999999999873
No 207
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4e-37 Score=307.05 Aligned_cols=248 Identities=28% Similarity=0.454 Sum_probs=203.3
Q ss_pred ceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+|.... +..|++|.++...... ..+.+.+|++.+..++|+|++++++++......++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 469999999999997753 8899999987653332 4678999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCC------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 484 ERGSLAEILSNDGS------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 484 ~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
++++|.+++..... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccc
Confidence 99999999987521 25689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCC--CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCC
Q 005864 558 KPGS--SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLP 633 (673)
Q Consensus 558 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 633 (673)
.... .......++..|+|||.+....++.++||||+|+++|||++ |..||......+ ......+. ...
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 227 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--------VLEYLRKGYRLP 227 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCCCC
Confidence 5432 22234557889999999988889999999999999999999 699987542211 11111111 111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+ ...+.++.+++.+||..+|++|||+.|+++.|+
T Consensus 228 ~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KP----EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CC----ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11 223456999999999999999999999999874
No 208
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.5e-37 Score=320.60 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=199.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+++.+ +++.||+|.+.+...........+..|+.++..++|++|+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36889999999999999999775 57889999986543333344566889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999997643 3578889999999999999999999 9999999999999999999999999999765433
Q ss_pred CCC-ceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--CC
Q 005864 561 SSN-WTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP--RL 632 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 632 (673)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||......+. ...+... +.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~--------~~~i~~~~~~~ 227 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGKIMNHKERF 227 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH--------HHHHhCCCccc
Confidence 222 23356899999999886 34578899999999999999999999974332211 1111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
+.+. .....+.++.+++.+|+..++.+ |++++|+++
T Consensus 228 ~~p~-~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 228 QFPA-QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred cCCC-ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 1111 11223456888999988665544 689998875
No 209
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.1e-37 Score=309.75 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=198.0
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|++++.+++||||+++++++..++..++|+|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 578889999999999999965 478999999886532 22345678999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|..+. .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 80 FMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred cCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 99999997652 367788889999999999999999 9999999999999999999999999999765432
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......++..|+|||++.+..++.++||||||+++|||++|+.||........... .......+.+...+.. ....
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 224 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-PLQLLQCIVDEDPPVL--PVGQ 224 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-hHHHHHHHhccCCCCC--CCCc
Confidence 22345788999999999988899999999999999999999999874322111000 0000111111111100 0112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+.++.+++.+||+.+|++||+++|+++.
T Consensus 225 ~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 225 FSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 33468899999999999999999999753
No 210
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.7e-37 Score=307.15 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=199.3
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee-cCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS-HPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .|+.||+|.+... ...+.+.+|+.++++++|+|++++++++. .++..++|+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 4688899999999999999977 4888999987542 12467889999999999999999999864 456789999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999986542 3578999999999999999999999 9999999999999999999999999998765332
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||......+. ...+...... ...
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~---------~~~~~~~~~~--~~~ 221 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---------VPRVEKGYKM--DAP 221 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH---------HHHHhcCCCC--CCC
Confidence 2 22344678999999988889999999999999999997 9999863322110 0000001110 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2234568899999999999999999999999874
No 211
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.1e-37 Score=306.84 Aligned_cols=246 Identities=29% Similarity=0.435 Sum_probs=195.4
Q ss_pred ceeccCCcEEEEEEEeC--C--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELP--S--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+|.+. + +..||+|.+...... ...+++.+|+.++++++||||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999653 2 368999998765332 34677899999999999999999999876 45679999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
++|+|.+++.... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 78 PLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999998654 578999999999999999999999 9999999999999999999999999999876543332
Q ss_pred cee---cccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 564 WTE---FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 564 ~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ..++..|+|||.+.+..++.++||||||+++|||++ |..||......+.. ...... .....+
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~-----~~~~~~--~~~~~~---- 220 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI-----AMLESG--ERLPRP---- 220 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHHcC--CcCCCC----
Confidence 211 123467999999998899999999999999999998 99998743221110 000000 011111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||..+|++||++.++++.|++
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1233468899999999999999999999999864
No 212
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.4e-37 Score=305.66 Aligned_cols=240 Identities=23% Similarity=0.386 Sum_probs=188.3
Q ss_pred ceeccCCcEEEEEEEeCC-------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 408 QCIGIGGQASVYRGELPS-------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
+.||+|+||.||+|...+ ...|++|.+... .......+.+|+.++..++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999997532 235888887543 2234567888999999999999999999999988
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc-------eE
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE-------AR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-------~k 547 (673)
..++||||+++|+|..++.... ..+++..+.+++.||++|++|||+. +++||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999999887543 3588899999999999999999999 9999999999999987654 89
Q ss_pred EecccceeecCCCCCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHH-hCCCCCcccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~-~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
++|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||......+. .
T Consensus 153 l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~---------~ 219 (262)
T cd05077 153 LSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK---------E 219 (262)
T ss_pred eCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH---------H
Confidence 9999998754322 2345788899999886 466899999999999999998 58888763221110 0
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
........... ....++.+++.+||+.||.+||++.++++.|.
T Consensus 220 ~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQCMLVT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcCccCCC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 01111111111 11245889999999999999999999998763
No 213
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.5e-37 Score=313.81 Aligned_cols=257 Identities=22% Similarity=0.342 Sum_probs=200.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|..||+|.++... .......+.+|++++.+++||||+++++++..++..++|+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36889999999999999999764 68889999886532 2234567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++++.. ..+++..+..++.|+++||+|||+.. +++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 79 EHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 999999999999765 34788899999999999999999732 8999999999999999999999999998755322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc---------------
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN--------------- 625 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 625 (673)
......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCC
Confidence 223456789999999998888999999999999999999999998632211000 00000000
Q ss_pred --------------cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 626 --------------EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 626 --------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.......+ .......+.++.+++.+||+.+|++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPP--KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCc--cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 00001134568899999999999999999999864
No 214
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.1e-37 Score=306.79 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=204.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.+|++... +|+.||+|.+...... ....+++.+|+.++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 4788999999999999999654 6899999998654322 2345678999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 80 YCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999999976432 3478899999999999999999999 99999999999999999999999999998765433
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||+..+..++.++||||||+++++|++|+.||...... ....++.....+.. ...
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~ 224 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--------NLVLKIIRGSYPPV---SSH 224 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--------HHHHHHhcCCCCCC---ccc
Confidence 3333456788999999998888999999999999999999999998632211 11112222222111 112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.+|++||++.+|++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 225 YSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3456899999999999999999999986
No 215
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.2e-37 Score=313.30 Aligned_cols=263 Identities=23% Similarity=0.366 Sum_probs=204.9
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
+.++.+..+.++|++.+.||+|+||.||+|... +++.+|+|.+..... ....+.+|+.++.++ +||||++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 445667778899999999999999999999664 688999998754211 235677899999999 69999999998
Q ss_pred ee-----cCCeeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 470 CS-----HPRHSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 470 ~~-----~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+. .++..++||||+++++|.+++.... ....+++..+..++.|+++|+.|||+. +++||||||+||+++++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 84 3456899999999999999886421 224578899999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+.++++|||++..............|++.|+|||++. +..++.++||||+||++|||++|+.||...........
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~ 240 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK 240 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence 9999999999987654433334456899999999875 34578899999999999999999999874332211100
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
......+....+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 241 -----~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 -----IPRNPPPTLHQP----ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred -----ccccCCCcccCC----CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 000001111111 1123458899999999999999999999874
No 216
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.7e-37 Score=312.37 Aligned_cols=248 Identities=26% Similarity=0.389 Sum_probs=200.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||.||+|.+. +++.||+|.+..... ....+.+.+|++++++++||||+++++++..++..++|+|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 3556788999999999999764 588999998864422 2345678999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.. ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||++.......
T Consensus 83 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 83 YLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred ccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 9999999999864 3478899999999999999999998 99999999999999999999999999998765433
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......++..|+|||++.+..++.++||||||+++|||++|+.||........ ...+.....+ .....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~~~~~~~~~~---~~~~~ 224 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--------LFLIPKNSPP---TLEGQ 224 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--------HhhhhcCCCC---CCCcc
Confidence 333345678899999999988899999999999999999999999863221110 0001011111 11113
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..+.+++.+||+.+|++||++.++++.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 34568899999999999999999999863
No 217
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8e-38 Score=320.69 Aligned_cols=195 Identities=25% Similarity=0.374 Sum_probs=171.8
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-C-----CcccceeeeeecCCe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-H-----RNIVKFYGFCSHPRH 475 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~ 475 (673)
+|++.+.||+|+||.|.+|.+ ++++.||||+++.. .....+...|+.+|..++ | -|+|+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 799999999999999999954 57999999999754 334667778999999996 4 499999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC--ceEEecccc
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY--EARVSDFGI 553 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~ 553 (673)
.|+|+|.+.. +|+++++...- ..++...+..++.||+.||.+||+. +|||+||||+|||+.+.+ .+||+|||.
T Consensus 263 lciVfELL~~-NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 9999998876 99999998753 5689999999999999999999999 999999999999997654 699999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|...... ......+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+
T Consensus 338 Sc~~~q~---vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 338 SCFESQR---VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred ccccCCc---ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 9876432 2256788999999999999999999999999999999999877753
No 218
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.4e-37 Score=308.12 Aligned_cols=252 Identities=25% Similarity=0.394 Sum_probs=201.5
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchh---hhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLL---SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|...+.||+|+||+||+|...+|+.+|+|.+..... ........+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999888899999998864321 1223456789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997653 478899999999999999999999 999999999999999999999999999875422
Q ss_pred C------CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 560 G------SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 560 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
. ........++..|+|||++.+..++.++||||+|+++|||++|+.||............ .......+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~- 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI---GAHRGLMPRL- 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh---hhccCCCCCC-
Confidence 1 11122345788999999999888999999999999999999999998743221110000 0000001111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+ ...+.++.+++.+||+.+|++||++.|+++
T Consensus 231 -~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 231 -P----DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -C----CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 123455889999999999999999999975
No 219
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=318.14 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=204.0
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
-|...+.||.|+||.||.|++ .+...||||++............++..|+..|.+++|||++.+.|+|..+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 355567899999999999966 4788999999987665666677889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||-| |-.|++.-.+ +++.+-++..|+.+.++||+|||+. +.||||||+.||++++.|.||++|||.|..+.+.
T Consensus 107 YClG-SAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHhc-cHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 9976 7788776654 5688888999999999999999999 9999999999999999999999999999877543
Q ss_pred CCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 562 SNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..++|||.|||||++. .+.|+-|+||||+|++..|+..+++|+-.++.+...+.. .+.-.|.++ ..
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI-----AQNesPtLq--s~- 248 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-----AQNESPTLQ--SN- 248 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH-----HhcCCCCCC--Cc-
Confidence 5578999999999875 567999999999999999999999996543332221111 111112222 22
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+..+..++..||++-|.+|||.+++++
T Consensus 249 --eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 249 --EWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred --hhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 34456888999999999999999999875
No 220
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.3e-37 Score=307.20 Aligned_cols=257 Identities=27% Similarity=0.438 Sum_probs=205.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||.|+||+||+|... ++..+|+|++....... ..+.+.+|++.++.++|+|++++++.+..++..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 36889999999999999999754 68899999986543222 4678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|++++++|.+++........+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999998654335688999999999999999999999 9999999999999999999999999998766543
Q ss_pred CCC----ceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 SSN----WTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 ~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
... .....++..|+|||++... .++.++||||||+++|||++|+.||........... ... ...+.....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~ 230 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLML----TLQ-NDPPSLETG 230 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHH----Hhc-CCCCCcCCc
Confidence 322 1334678899999998776 789999999999999999999999874432211000 000 001111110
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+..+.+++.+||+.||++||++.|+++
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 231 -ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 011234566889999999999999999999985
No 221
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4e-37 Score=321.22 Aligned_cols=259 Identities=21% Similarity=0.293 Sum_probs=196.4
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 474 (673)
..++|++.+.||+|+||.||+|... +|+.||+|++..... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3478999999999999999999764 689999999865432 2234567889999999999999999999986543
Q ss_pred --eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 --HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999976 66666643 367888899999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc----
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN---- 621 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~---- 621 (673)
+++..... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||............ ..
T Consensus 169 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 169 LARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred CccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 99754322 2223456889999999999999999999999999999999999999743321110000 00
Q ss_pred ---cccccccCCCCCC--------------C--CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ---LSLNEILDPRLPL--------------P--SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ---~~~~~~~~~~~~~--------------~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.........+... + ..........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000000 0 0001112346889999999999999999999986
No 222
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.8e-37 Score=325.31 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=197.5
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----ee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 476 (673)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|+++++.++||||+++++++..++ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478889999999999999976 4799999999865322 2234567889999999999999999999998766 78
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+. ++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 99999997 4888888654 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cc-----
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NL----- 622 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~----- 622 (673)
...... ......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+...... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 543322 22334678899999998764 47899999999999999999999997543221100000 00
Q ss_pred --ccccccCCCCCCCC------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 --SLNEILDPRLPLPS------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 --~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+......+. ......+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00000000000000 001112456889999999999999999999985
No 223
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.9e-37 Score=305.44 Aligned_cols=252 Identities=27% Similarity=0.408 Sum_probs=205.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||.|+||.||+|... +++.+++|.+..... ...+.+.+|++++++++||||+++++++...+..+++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 57888999999999999999764 588999999875422 24678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 80 EYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred eCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 9999999999987652 3578899999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCceecccccccccccccccC---CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC-C
Q 005864 561 SSNWTEFAGTFGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP-S 636 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 636 (673)
........++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... ......+..+ .
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~--------~~~~~~~~~~~~ 226 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF--------LISKSNFPPPKL 226 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH--------HHHhccCCCccc
Confidence 3333445678899999998776 78999999999999999999999987433211100 0000100100 0
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||..+|.+|||+.+++.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 122344567999999999999999999999975
No 224
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.8e-37 Score=314.68 Aligned_cols=260 Identities=18% Similarity=0.267 Sum_probs=199.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||.|+||.||+|... +++.||+|.+..... ......+.+|+.++++++||||+++++++..++..++|+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999765 688999999864422 222456778999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++ ++|.+++...+ ..+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 84 EYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9998 49999887653 3578899999999999999999999 9999999999999999999999999999765433
Q ss_pred CCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccccccC---
Q 005864 561 SSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLNEILD--- 629 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~~~~~--- 629 (673)
........+++.|+|||.+.+. .++.++||||||+++|||++|+.||......+... ......+...+.
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 3333445678899999987654 47889999999999999999999987433211000 000001111100
Q ss_pred ---CCCCCC-C----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 ---PRLPLP-S----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ---~~~~~~-~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.. . ......+..+.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 0 001122346789999999999999999999985
No 225
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-37 Score=315.47 Aligned_cols=255 Identities=23% Similarity=0.377 Sum_probs=201.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
.++|.+.+.||+|+||.||+|+.. .+..||+|.++... .......+..|+.++.++ +||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 357888999999999999999642 34579999887532 223466788999999999 6999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
..+..++|+||+++|+|.+++..... ...+++.++.+++.|++.||.|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 98999999999999999999976421 23588999999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
++++++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||......+.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~ 245 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL 245 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999865432211 112234467999999998889999999999999999999 8888864322110
Q ss_pred cccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 616 SSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+... ....+. ..+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 246 --------~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 246 --------FKLLREGHRMDKPS----NCTHELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred --------HHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0001111 111111 22345889999999999999999999999885
No 226
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4e-37 Score=317.07 Aligned_cols=259 Identities=19% Similarity=0.268 Sum_probs=193.9
Q ss_pred ccceeccC--CcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 406 AEQCIGIG--GQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 406 ~~~~ig~G--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+.++||+| +||+||++.. ++|+.||+|++...... ....+.+.+|+++++.++||||+++++++..++..++|+||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45789999 7899999966 57999999998654322 23356678899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+........
T Consensus 81 ~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 81 MAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred cCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999975432 3478999999999999999999999 999999999999999999999999986543321111
Q ss_pred -------Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc------
Q 005864 563 -------NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI------ 627 (673)
Q Consensus 563 -------~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 627 (673)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||....................
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 1122346678999999875 4588999999999999999999999974321110000000000000
Q ss_pred -------------cCCCC----------C-----CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -------------LDPRL----------P-----LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -------------~~~~~----------~-----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+... + ...........++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00000 0 000111233457899999999999999999999975
No 227
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.3e-37 Score=311.97 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=203.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||.|+||.||+|... +++.||+|.+... .....+.+.+|++++++++||||+++++++..+...++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 356888999999999999999764 6899999998643 233457788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++...+ ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 81 IEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 99999999999987653 3588999999999999999999999 999999999999999999999999999876544
Q ss_pred CCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 560 GSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.........+++.|+|||.+. +..++.++||||||+++|||++|+.||......+.. ........+.+..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~ 230 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL-----LKILKSEPPTLDQ 230 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH-----HHHhcCCCCCcCC
Confidence 333344566889999999874 345778999999999999999999998743221110 0000000111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.+|.+||++.++++
T Consensus 231 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 231 ----PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ----cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1123446889999999999999999999985
No 228
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4e-37 Score=308.32 Aligned_cols=252 Identities=26% Similarity=0.343 Sum_probs=188.7
Q ss_pred eeccCCcEEEEEEEeCC---CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQASVYRGELPS---GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.||+|+||+||+|.... ...+|+|.+.... .......+.+|+..++.++||||+++++++...+..++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 58999999999996543 4568888765432 233456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC-
Q 005864 486 GSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS- 562 (673)
Q Consensus 486 gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 562 (673)
|+|.+++..... ....++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 999999976532 12356788889999999999999999 999999999999999999999999999865432211
Q ss_pred -Cceeccccccccccccccc-------CCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 563 -NWTEFAGTFGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 563 -~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
......+++.|+|||+... ..++.++|||||||++|||++ |..||......+........ ....++
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~ 231 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE-----QDIKLP 231 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc-----cCccCC
Confidence 1122345678999998642 356789999999999999999 78887643221100000000 011111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+ ......+..+.+++..|| .||++|||++||++.|.
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KP-QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CC-cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11 111223445777888998 59999999999999874
No 229
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.4e-37 Score=311.79 Aligned_cols=254 Identities=23% Similarity=0.342 Sum_probs=202.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|.+.... .......+.+|+.++++++||||+++++++..++..++|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 35788899999999999999775 79999999886532 2234577889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++........+++..+..++.|++.|+.|||+.. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99999999999876533346899999999999999999999632 8999999999999999999999999998765322
Q ss_pred CCCceecccccccccccccccCC------cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
......++..|+|||.+.+.. ++.++|+|||||++|||++|+.||....... .......+.+...+
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~- 228 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-----IFAQLSAIVDGDPP- 228 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-----HHHHHHHHhhcCCC-
Confidence 223345788999999985543 4789999999999999999999986322110 01111122222211
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||+.+|++||+++++++
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 229 --TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred --CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 112234566889999999999999999999986
No 230
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.6e-37 Score=330.75 Aligned_cols=257 Identities=21% Similarity=0.255 Sum_probs=190.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------ 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 473 (673)
..+|++.+.||+|+||.||+|... +++.||||++... .....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-------cchHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 357999999999999999999764 6899999987542 12234699999999999999999886432
Q ss_pred --CeeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEe
Q 005864 474 --RHSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVS 549 (673)
Q Consensus 474 --~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~ 549 (673)
...++||||+++ ++.+++... .....+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246789999986 787776532 2234688999999999999999999999 999999999999999664 69999
Q ss_pred cccceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN 621 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~ 621 (673)
|||+++.+..... .....|++.|+|||++.+. .++.++||||+||++|||++|..||......+..... ..
T Consensus 214 DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 214 DFGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 9999987644322 2345679999999988654 6899999999999999999999999754322110000 00
Q ss_pred ccccc----ccCCCCCCC-Ccch-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 LSLNE----ILDPRLPLP-SRNI-----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ~~~~~----~~~~~~~~~-~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..... ..+..++.. .... ...+.++.+++.+||..||.+|||+.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00000 000000100 0000 112356889999999999999999999874
No 231
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2e-37 Score=323.11 Aligned_cols=259 Identities=20% Similarity=0.286 Sum_probs=197.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP----- 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 473 (673)
..++|++.+.||+|+||.||+|... .++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4568999999999999999999764 6899999998754322 23456778899999999999999999988643
Q ss_pred -CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 346899999976 67776653 377888999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc------------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------ 620 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------ 620 (673)
+++..... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+......
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99865332 22234568999999999999899999999999999999999999997433211100000
Q ss_pred --cccccccc----------------CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 --NLSLNEIL----------------DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 --~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ +...+...........++.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 00000000 00000001111122346889999999999999999999986
No 232
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.5e-37 Score=307.63 Aligned_cols=250 Identities=30% Similarity=0.471 Sum_probs=200.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh------hHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE------ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
+|.+.+.||+|++|.||+|... +++.||+|.+....... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3677889999999999999764 68899999886542221 1234678899999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++|+||+++++|.+++...+ .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997653 478889999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC
Q 005864 556 FLKPGSS------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 556 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
....... ......++..|+|||.+.+..++.++||||+|+++|||++|+.||.......... .......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~ 229 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF-----KIGENAS 229 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH-----HHhccCC
Confidence 7653211 1122457889999999988889999999999999999999999987432211100 0001111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+..+ ...+..+.+++.+||+.||.+||++.|+++
T Consensus 230 ~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 230 PEIP------SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CcCC------cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111 123456889999999999999999999986
No 233
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-37 Score=312.86 Aligned_cols=258 Identities=27% Similarity=0.401 Sum_probs=204.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +|+.||+|++.... .....+.+.+|++++..++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 46778899999999999999764 68899999876532 2334678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... ..+++..+..++.+++.|+.|||+.. +++||||+|+||++++++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 83 EFMDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred ecCCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999998764 34789999999999999999999732 8999999999999999999999999998754322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc---ccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM---NLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 637 (673)
. .....++..|+|||++.+..++.++|||||||++||+++|+.||+............ ......+.....+..
T Consensus 158 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (284)
T cd06620 158 I--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL-- 233 (284)
T ss_pred c--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC--
Confidence 1 223568899999999988889999999999999999999999997443211100000 011112221111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....+..+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 234 PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111244568999999999999999999999875
No 234
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.4e-37 Score=314.39 Aligned_cols=254 Identities=23% Similarity=0.281 Sum_probs=206.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||+||+|... +++.||+|.+...........+.+..|++++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999775 59999999997654443345678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+.+++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987543 24688999999999999999999999 9999999999999999999999999998755322
Q ss_pred CC-----------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 561 SS-----------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 561 ~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 1112357889999999998889999999999999999999999987432
Q ss_pred cccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 005864 612 LLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT----MQTVCQ 669 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~v~~ 669 (673)
.. .....+.......+.. ...+..+.+++.+||+.||++||| ++|+++
T Consensus 237 ~~--------~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RD--------ETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hH--------HHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 21 1122222323222211 114567999999999999999999 777664
No 235
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.2e-37 Score=307.24 Aligned_cols=239 Identities=22% Similarity=0.363 Sum_probs=186.6
Q ss_pred eeccCCcEEEEEEEeCC-------------------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc
Q 005864 409 CIGIGGQASVYRGELPS-------------------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 463 (673)
.||+|+||.||+|.... ...|++|.+.... ......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 58999999999996421 1358899876432 2335678889999999999999
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+++++++..+...++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++++
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 999999999999999999999999999987543 3578888999999999999999999 99999999999999764
Q ss_pred C-------ceEEecccceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHH-hCCCCCccccccc
Q 005864 544 Y-------EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLS 614 (673)
Q Consensus 544 ~-------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~-~g~~p~~~~~~~~ 614 (673)
+ .++++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......+
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred CcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3 3799999988644221 22356788999998865 56899999999999999995 6999986432111
Q ss_pred ccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. ..........+... ...+.+++.+||+.+|++|||+.++++.|+
T Consensus 230 ~---------~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 K---------ERFYEKKHRLPEPS----CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H---------HHHHHhccCCCCCC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 0 11111111111111 235889999999999999999999999874
No 236
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.7e-37 Score=306.70 Aligned_cols=248 Identities=23% Similarity=0.389 Sum_probs=193.2
Q ss_pred ceeccCCcEEEEEEEeCC-CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELPS-GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+|...+ |. .+++|.++... .....+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999997753 44 46888876432 223456788999999999 7999999999999999999999999
Q ss_pred cCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 484 ERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 484 ~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
++|+|.+++...+. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECC
Confidence 99999999975431 13478999999999999999999998 999999999999999999999999
Q ss_pred ccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
||++....... .......+..|+|||++....++.++||||||+++|||++ |..||......+. ...+..
T Consensus 156 fgl~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--------~~~~~~ 226 (270)
T cd05047 156 FGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--------YEKLPQ 226 (270)
T ss_pred CCCccccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH--------HHHHhC
Confidence 99986322111 1111223567999999988889999999999999999997 9999864321110 011101
Q ss_pred C-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 630 P-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 630 ~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
. ....+. ..+.++.+++.+||+.+|.+|||+.++++.|++
T Consensus 227 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 227 GYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred CCCCCCCC----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 0 111111 223458899999999999999999999999863
No 237
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.7e-37 Score=313.47 Aligned_cols=256 Identities=21% Similarity=0.268 Sum_probs=201.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||++... +++.|++|.+...........+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999765 58899999987654333445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997653 478899999999999999999999 9999999999999999999999999998642110
Q ss_pred CC---------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 561 SS---------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 561 ~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
.. ......++..|+|||++....++.++|+||||+++||+++|..||..... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~~ 226 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFG 226 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH
Confidence 00 01123567889999999888899999999999999999999999863221 11111
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.........+... ...+..+.+++.+||+.||++||++.++.+.|+
T Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 227 QVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 1111111111111 123445889999999999999999666655553
No 238
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.5e-37 Score=311.20 Aligned_cols=261 Identities=25% Similarity=0.354 Sum_probs=201.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--C
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--R 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 474 (673)
..|.+.+.||+|+||.||.+.. .++..||+|.++... .......+.+|+++++.++|||++++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 3477889999999999999964 358899999986542 233456799999999999999999999998765 5
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 6889999999999999997643 3579999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccc--cccc-ccc---cccc
Q 005864 555 KFLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS--SSSS-NMN---LSLN 625 (673)
Q Consensus 555 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~-~~~---~~~~ 625 (673)
+........ .....++..|+|||++.+..++.++||||||+++|||++++.|+....... .... ... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 866433221 123446678999999988889999999999999999999877643211000 0000 000 0000
Q ss_pred ccc-CC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 626 EIL-DP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 626 ~~~-~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+ +. ..+.+ ...+..+.+++.+||+.+|++|||++++++.|++
T Consensus 237 ~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 237 RVLEEGKRLPRP----PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HHHHcCccCCCC----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 000 11 11111 1234569999999999999999999999998863
No 239
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=289.48 Aligned_cols=262 Identities=21% Similarity=0.354 Sum_probs=218.1
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
++++-+.+. +.+|+|+|+.|-.+ ...+|..||||++.+. ......+..+|++++... .|+||++++++|.
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 566666554 67999999999988 5678999999998764 344578889999999999 5999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc---eEE
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE---ARV 548 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl 548 (673)
++...|+|||.|.||+|.++++++ ..+++.++.++.++||.||.+||.+ ||.|||+||+||+...... +||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~---~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKR---KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHh---hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 999999999999999999999886 4689999999999999999999999 9999999999999976644 899
Q ss_pred ecccceeecCCCC-------CCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccc--
Q 005864 549 SDFGIAKFLKPGS-------SNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS-- 614 (673)
Q Consensus 549 ~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 614 (673)
|||++..-+.... ......+|+..|||||+.. ...|+.+.|.||+|||+|-|+.|..||.+.=..+
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 9999886543221 1223467888999999764 3458899999999999999999999996432210
Q ss_pred -ccccc----cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 615 -SSSSN----MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 615 -~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+.. .+..+..+-++++.+|...|...+.+..+++...+..|+.+|.++.+++.
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 01111 23446677889999999999999999999999999999999999998875
No 240
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8e-37 Score=306.19 Aligned_cols=258 Identities=24% Similarity=0.388 Sum_probs=203.6
Q ss_pred CCCccceeccCCcEEEEEEEeCC--CCEEEEEeeccchh-------hhhHHHHHHHHHHHHHhc-cCCCcccceeeeeec
Q 005864 403 NFDAEQCIGIGGQASVYRGELPS--GEVVAVKKFHSLLL-------SEISVQREFLNEIKALTE-IRHRNIVKFYGFCSH 472 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 472 (673)
.|++.+.||+|+||.||+|.... ++.+|+|.+..... .......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999998754 78899998754221 122345667788888875 699999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 473 PRHSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
++..++||||+++++|.+++... .....+++..++.++.|++.|+.|||+.. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988542 12245888999999999999999999631 8999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|.+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...+....
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~--------~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL--------ATKIVEAV 229 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH--------HHHHhhcc
Confidence 9998765433 33456688899999999988899999999999999999999999863322111 11111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..... ....+.++.+++.+||+.||++||++.|+.+++++
T Consensus 230 ~~~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 230 YEPLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred CCcCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11100 11233568899999999999999999999999874
No 241
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.8e-37 Score=305.03 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=190.7
Q ss_pred ceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee-cCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS-HPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 482 (673)
+.||+|+||.||+|.+. ++..||+|.+... ......+.+.+|+.+++.++||||+++++++. .++..++|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 46899999999999753 2457999987542 22334677889999999999999999999875 45568899999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.+.....
T Consensus 79 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 79 MKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999997643 3356778889999999999999999 999999999999999999999999999976533211
Q ss_pred ----CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhC-CCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 563 ----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 563 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
......++..|+|||++.+..++.++||||||+++|||++| ..||...... ...............
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~- 224 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--------DITVYLLQGRRLLQP- 224 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhcCCCCCCC-
Confidence 11223456789999999888899999999999999999995 5555432111 011111111111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 225 --~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 225 --EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred --CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 1223468899999999999999999999999863
No 242
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.8e-37 Score=302.94 Aligned_cols=248 Identities=27% Similarity=0.412 Sum_probs=199.0
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCC
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 487 (673)
+.||+|+||.||+|...+++.||+|.+...... .....+.+|++++++++||||+++++++...+..++|+||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 468999999999998877999999988654332 346789999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc--e
Q 005864 488 LAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW--T 565 (673)
Q Consensus 488 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~ 565 (673)
|.+++.... ..+++..+..++.+++.|++|||++ +++||||+|+||+++.++.++|+|||++.......... .
T Consensus 79 l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 79 LLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 999997643 3578899999999999999999999 99999999999999999999999999997654221111 1
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
....+..|+|||++.+..++.++|+||||+++|||++ |..||....... ..+.+......+ .....+.
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~ 222 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---------TRERIESGYRMP--APQLCPE 222 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---------HHHHHhcCCCCC--CCccCCH
Confidence 1223567999999988889999999999999999999 888876332110 011111111110 1123345
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 645 SILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
++.+++.+||..+|.+|||+.|+++.|++
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 69999999999999999999999999864
No 243
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.4e-37 Score=309.33 Aligned_cols=247 Identities=26% Similarity=0.334 Sum_probs=204.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999765 68999999987654444445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999999775 3578899999999999999999998 9999999999999999999999999999876433
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||...... .....+.......+..
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~--- 220 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI--------QIYEKILEGKVRFPSF--- 220 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCccCCcc---
Confidence 23456889999999998888899999999999999999999998743311 1111222223332222
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+..+.+++.+||..||.+|| +++|+++
T Consensus 221 -~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 221 -FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -CCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 234588999999999999999 7777753
No 244
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=8.6e-37 Score=305.49 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=187.5
Q ss_pred eeccCCcEEEEEEEeCCC---CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQASVYRGELPSG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.||+|+||+||+|...++ ..+++|.+.... .....+.+.+|+..++.++||||+++++++......++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 599999999999965443 345666655432 223467899999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCC-CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC--C
Q 005864 486 GSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS--S 562 (673)
Q Consensus 486 gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 562 (673)
|+|.++++.... ....++.....++.|+++||+|||+. +++||||||+||+++.++.++|+|||++....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999976432 23466777889999999999999999 99999999999999999999999999986432211 1
Q ss_pred Cceeccccccccccccccc-------CCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCC
Q 005864 563 NWTEFAGTFGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
......++..|+|||++.. ..++.++||||||+++|||++ |..||......+..............++.+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLEL 236 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCC
Confidence 1233567889999998743 245789999999999999997 56677533221111000011111122222221
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....+.+++..|| .+|++||+++||++.|.
T Consensus 237 ------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 237 ------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 12345778999999 67999999999999874
No 245
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.8e-37 Score=312.69 Aligned_cols=248 Identities=27% Similarity=0.381 Sum_probs=199.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+....||+|+||.||++... ++..||||.+.... ....+.+.+|+..++.++||||+++++.+..++..++||||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 334467999999999999764 68899999876432 22356788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 101 LEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 9999999998643 378899999999999999999999 999999999999999999999999999876544333
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......++..|+|||...+..++.++||||||+++|||++|+.||......... ......+.+.... ....
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~ 244 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-----RRIRDNLPPRVKD----SHKV 244 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHhcCCCcccc----cccc
Confidence 334456889999999998888999999999999999999999998643221110 0011111111111 1123
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+..+.+++.+||..||++|||++|+++.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 3458889999999999999999999863
No 246
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.1e-37 Score=310.65 Aligned_cols=261 Identities=22% Similarity=0.340 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+.++++++|||++++++++..+...++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 36888999999999999999776 5899999988654221 223456889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|..+.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 80 EYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred eccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999999888877654 3488999999999999999999998 9999999999999999999999999999877554
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc---c---cccccc------
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM---N---LSLNEI------ 627 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~---~~~~~~------ 627 (673)
........++..|+|||++.+ ..++.++||||||+++|||++|+.||......+...... . ....+.
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 433344567889999999875 457889999999999999999999986433211100000 0 000000
Q ss_pred ----cCCCCCCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 ----LDPRLPLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ----~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...... ......+..+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000 011123466889999999999999999999975
No 247
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.5e-37 Score=310.66 Aligned_cols=260 Identities=22% Similarity=0.318 Sum_probs=193.0
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeec-----C
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSH-----P 473 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~ 473 (673)
+|++.+.||+|+||+||+|... +|+.||+|.++.....+ .....+.+|+.++..+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 4788899999999999999765 68999999886532221 1123455666666655 79999999998864 3
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
...++|+||+++ +|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 457899999985 89998876432 4588999999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc-
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN- 625 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~- 625 (673)
+....... ......++..|+|||++.+..++.++||||+||++|||++|+.||............ ....+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 155 ARIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred cccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 98664322 223456789999999999889999999999999999999999998643211100000 000000
Q ss_pred ------cccCCCCCC-CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 ------EILDPRLPL-PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ------~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.... ...........+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000 00111123456889999999999999999999975
No 248
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.9e-37 Score=309.86 Aligned_cols=263 Identities=25% Similarity=0.371 Sum_probs=204.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 474 (673)
+.|...+.||+|+||.||+|.+. +++.||||.+...... ...+.+.+|++.++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 45777899999999999999753 4788999998765332 346789999999999999999999999877 55
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++++|||.+
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 7899999999999999998654 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc--cc----ccccccc
Q 005864 555 KFLKPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS--SS----NMNLSLN 625 (673)
Q Consensus 555 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--~~----~~~~~~~ 625 (673)
.......... ....++..|+|||...+..++.++||||||+++|||++|+.|+......... .. .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 8765332221 1223456799999998889999999999999999999999997642211100 00 0001111
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+......+ .....+.++.+++.+||+.+|++|||+.|++++|++
T Consensus 237 ~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 237 ELLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred HHHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 1111111111 111233568999999999999999999999999874
No 249
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.8e-37 Score=316.81 Aligned_cols=254 Identities=22% Similarity=0.367 Sum_probs=201.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 472 (673)
.+|.+.+.||+|+||.||+|+.. .+..||+|.++.. ......+++.+|++++.++ +||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 46889999999999999999642 1236899987643 2223467889999999999 79999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 473 PRHSFLVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
++..++++||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 166 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVL 166 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence 999999999999999999997532 123578899999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~ 616 (673)
+++++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-- 244 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-- 244 (334)
T ss_pred EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--
Confidence 999999999999999866432211 122234567999999999899999999999999999998 888886432211
Q ss_pred ccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 617 SSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 617 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+... ....+. ..+.++.+++.+||+.+|++||++.|+++.|+
T Consensus 245 ------~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 245 ------LFKLLKEGHRMDKPA----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred ------HHHHHHcCCCCCCCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11111111 111111 22346889999999999999999999999886
No 250
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.7e-37 Score=306.64 Aligned_cols=257 Identities=24% Similarity=0.390 Sum_probs=203.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+|+..+.||+|+||+||+|+.+ +.+.|++|.+... ......+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT--KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc--cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 46888899999999999999754 3467999987543 222346789999999999999999999999999899
Q ss_pred eeEEEecccCCChHHHHhcCCCC------ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 476 SFLVYECLERGSLAEILSNDGSI------KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
.++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 99999999999999999765422 2589999999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCC-CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGS-SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 550 Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
|||++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--------~~~~~ 231 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--------VLNRL 231 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--------HHHHH
Confidence 999987542211 12233456778999999988888999999999999999998 788885322111 11111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.......+. ....+..+.+++.+||+.+|++||++.|+++.|.+
T Consensus 232 ~~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 232 QAGKLELPV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HcCCcCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 111111110 11233468999999999999999999999999875
No 251
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=316.43 Aligned_cols=244 Identities=25% Similarity=0.354 Sum_probs=199.2
Q ss_pred eeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCC
Q 005864 409 CIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 487 (673)
++|+|.||+||-|++.+ ..++|||-+.... ....+-+..|+...++++|.|||+++|.|.+++..-+.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 59999999999998764 6679999886532 2346678899999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCccc--hHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecCCCCCCc
Q 005864 488 LAEILSNDGSIKEF--SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 488 L~~~l~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
|.++++..= .++ .+.+.-.+.+||++||.|||++ .|||||||-.||+++. .|.+||+|||-++++..-+...
T Consensus 659 LSsLLrskW--GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T 733 (1226)
T KOG4279|consen 659 LSSLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT 733 (1226)
T ss_pred HHHHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence 999998642 234 6677778899999999999999 9999999999999975 5889999999999886656666
Q ss_pred eecccccccccccccccC--CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 565 TEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
..+.||..|||||++..+ .|+.++|||||||+..||.||++||....... ...-..-+.....+ .+.+.
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-----AAMFkVGmyKvHP~----iPeel 804 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-----AAMFKVGMYKVHPP----IPEEL 804 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-----HhhhhhcceecCCC----CcHHH
Confidence 778899999999999865 48999999999999999999999986332111 11111111111222 23455
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+...+|.+|+.+||.+||+++++++
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 667889999999999999999999875
No 252
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.9e-37 Score=306.24 Aligned_cols=240 Identities=22% Similarity=0.388 Sum_probs=188.8
Q ss_pred ceeccCCcEEEEEEEeCC--------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 408 QCIGIGGQASVYRGELPS--------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+.||+|+||+||+|.... ...||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 469999999999996532 234888876542 223456788899999999999999999999998999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc--------eEEecc
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE--------ARVSDF 551 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~Df 551 (673)
|||+++|+|.++++..+ ..+++..+..++.||+.|++|||+. +++||||||+||+++.++. ++++||
T Consensus 78 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999998754 3578899999999999999999999 9999999999999987765 699999
Q ss_pred cceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCC-CCCcccccccccccccccccccccC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGK-HPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
|.+...... ....++..|+|||++.+. .++.++||||||+++|||++|. .|+........ .....
T Consensus 153 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~---------~~~~~ 219 (258)
T cd05078 153 GISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK---------LQFYE 219 (258)
T ss_pred ccccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH---------HHHHH
Confidence 988654321 234578899999998764 5788999999999999999985 55543221110 01111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 630 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+...+... ..++.+++.+||+.||++|||++++++.|+
T Consensus 220 ~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLPAPK----WTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCCCCC----cHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 122222222 245889999999999999999999999874
No 253
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.3e-36 Score=306.34 Aligned_cols=251 Identities=25% Similarity=0.426 Sum_probs=200.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|++.+.||+|+||.||+|..+ +|. .||+|....... .....++.+|+..+++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 56888899999999999999764 333 589998765432 3345778899999999999999999999987 788
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.++.
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 99999999999999998754 3488999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCCce--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 557 LKPGSSNWT--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 557 ~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
......... ...++..|+|||.+....++.++|+||||+++||+++ |+.||+.....+ ....+... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~ 230 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--------IPDLLEKGERL 230 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhCCCCC
Confidence 654332221 1223568999999988889999999999999999998 999987432211 11111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+.. .+..+.+++.+||..+|++||++.++++.|+
T Consensus 231 ~~~~~----~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 231 PQPPI----CTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CCCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11111 2245889999999999999999999999886
No 254
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.6e-37 Score=313.23 Aligned_cols=194 Identities=20% Similarity=0.350 Sum_probs=159.9
Q ss_pred cceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEEEe
Q 005864 407 EQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLVYE 481 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 481 (673)
.+.||+|+||+||+|+.. +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 467999999999999764 56789999886432 12456789999999999999999999854 456789999
Q ss_pred cccCCChHHHHhcCC------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----CCCCceEEecc
Q 005864 482 CLERGSLAEILSNDG------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL----SSEYEARVSDF 551 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Df 551 (673)
|+.+ +|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9875 8888875432 123588899999999999999999999 99999999999999 45678999999
Q ss_pred cceeecCCCCC---CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 552 GIAKFLKPGSS---NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 552 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|+++....... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99987643322 22345789999999998764 588999999999999999999999863
No 255
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.4e-37 Score=324.30 Aligned_cols=254 Identities=20% Similarity=0.247 Sum_probs=194.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|.+.+.||+|+||.||+|.+. .++.||||... ...+.+|++++++++|||||++++++..++..++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 346889999999999999999775 58899999632 23456899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||++. ++|.+++.... ..+++.++..|+.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 239 ~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 99995 68998887543 3589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc-------C-
Q 005864 560 GSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL-------D- 629 (673)
Q Consensus 560 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------~- 629 (673)
.... .....||..|+|||++.+..++.++|||||||++|||++|..|+-........... ......++ +
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPY-DAQILRIIRQAQVHVDE 391 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCc-HHHHHHHHHhhcccccc
Confidence 3221 22356899999999999999999999999999999999987664211100000000 00000000 0
Q ss_pred --------------------CCCCCCCcchH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 630 --------------------PRLPLPSRNIQ---DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 630 --------------------~~~~~~~~~~~---~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.........+. .....+.+++.+||+.||.+|||+.|+++.
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000001111 122368899999999999999999999874
No 256
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.9e-36 Score=303.53 Aligned_cols=251 Identities=27% Similarity=0.403 Sum_probs=199.2
Q ss_pred cCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+|.+.+.||+|+||.||+|.+.+ ...||+|....... ....+.+.+|+.++++++||||+++++++.+ ...+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 457888999999999999997643 34689998765422 2345688999999999999999999999875 4578
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||+++..
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 83 IVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 9999999999999997653 3589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc-CCCCCC
Q 005864 558 KPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL-DPRLPL 634 (673)
Q Consensus 558 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 634 (673)
...... .....++..|+|||.+....++.++||||||+++||+++ |..||......+. ...+. ..+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--------~~~~~~~~~~~~ 229 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--------IGRIENGERLPM 229 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--------HHHHHcCCcCCC
Confidence 443221 122234568999999988889999999999999999996 9999864322111 00000 011122
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+. ..+.++.+++.+|+..+|.+|||+.++++.|+
T Consensus 230 ~~----~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 230 PP----NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 21 23446889999999999999999999999886
No 257
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3e-37 Score=312.27 Aligned_cols=261 Identities=23% Similarity=0.374 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|.++ +++.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 36888999999999999999875 58999999886543222 34567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++.... ..+++.++..++.|+++|++|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred ecCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999999998887654 2378999999999999999999999 9999999999999999999999999999876554
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc------cccccccccc-----
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS------NMNLSLNEIL----- 628 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~------~~~~~~~~~~----- 628 (673)
........++..|+|||++.+ ..++.++||||||+++|||++|+.||......+.... ..........
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 444444567899999998875 4478899999999999999999999863221110000 0000000000
Q ss_pred -----CCCCCCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 -----DPRLPLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 -----~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...... ......+..+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000 001123456899999999999999999999985
No 258
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.1e-37 Score=320.50 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=197.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP----- 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 473 (673)
..++|.+.+.||+|+||.||+|... .++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3468999999999999999999764 6889999998754322 23356788899999999999999999987543
Q ss_pred -CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
...++||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999976 77777753 377888999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc------------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------ 620 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------ 620 (673)
+++..... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+......
T Consensus 172 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 172 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred CccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99865332 22234568999999999999999999999999999999999999997433211100000
Q ss_pred --ccccccccC--------------CCC--CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 --NLSLNEILD--------------PRL--PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 --~~~~~~~~~--------------~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......... +.. +............+.+++.+|++.||.+|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000 000 0000011112346889999999999999999999986
No 259
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.7e-37 Score=308.52 Aligned_cols=260 Identities=23% Similarity=0.372 Sum_probs=204.2
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
.++.++..+.+.|++.+.||+|+||.||+|.. .+++.||+|.+.... ....++..|+.++.++ +||||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 34556666778899999999999999999976 468899999875432 2345678899999998 69999999999
Q ss_pred eec------CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 470 CSH------PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 470 ~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+.. .+..+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++++
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 853 4578999999999999999976432 3477888899999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+.++|+|||++..............++..|+|||.+. ...++.++|||||||++|||++|+.||.........
T Consensus 158 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-- 235 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-- 235 (282)
T ss_pred CCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh--
Confidence 9999999999876543333334466889999999875 345788999999999999999999998643221110
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......... .......+.++.+++.+||+.||.+||++.|+++
T Consensus 236 ------~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 ------FLIPRNPPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ------hhHhhCCCC--CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 011111111 1111234456999999999999999999999975
No 260
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.8e-37 Score=311.87 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=197.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|+..+.||+|+||.||+|.+. +|. .||+|.+.... ......++.+|+.+++.++||||++++|++..+ ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 46788899999999999999763 444 57888876532 223345788999999999999999999998754 46
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 79999999999999997653 3578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... .....++..|+|||++.+..++.++||||||+++|||++ |+.||........ ..... .....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-----~~~~~--~~~~~~ 231 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-----PDLLE--KGERLP 231 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHH--CCCCCC
Confidence 6433221 122345678999999998899999999999999999997 9999864321100 00000 011111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. ..+..+.+++.+||..+|++||+++++++.|+
T Consensus 232 ~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 232 QPP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 12345889999999999999999999999875
No 261
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.6e-37 Score=306.40 Aligned_cols=249 Identities=26% Similarity=0.420 Sum_probs=196.9
Q ss_pred ceeccCCcEEEEEEEeCC-------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 408 QCIGIGGQASVYRGELPS-------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.||+|+||.||+|...+ ++.||+|.+.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 368999999999997642 3579999876432 2234667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC----CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-----ceEEecc
Q 005864 481 ECLERGSLAEILSNDG----SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-----EARVSDF 551 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Df 551 (673)
||+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||+|+||+++.++ .++++||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999999997532 123478899999999999999999998 999999999999999877 8999999
Q ss_pred cceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc
Q 005864 552 GIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 552 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
|++........ ......++..|+|||++.++.++.++||||||+++|||++ |+.||......+. ...+.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~--------~~~~~ 227 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV--------LQHVT 227 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH--------HHHHh
Confidence 99976533221 1122345678999999999999999999999999999998 9999863321110 00000
Q ss_pred C-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 629 D-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 629 ~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
. .....+ ...+..+.+++.+||..+|++||+++++++.|.+
T Consensus 228 ~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGRLQKP----ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCccCCc----ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 111111 2334568899999999999999999999999864
No 262
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=317.45 Aligned_cols=249 Identities=22% Similarity=0.328 Sum_probs=203.8
Q ss_pred CCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+++..||.|+||.||+|..++ +-..|.|.+.. .......+|.-|+++|..++||+||++++.|..++..+++.||
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 4455679999999999997765 33455565533 3445688999999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
|.||-+..++-.-+ ..+.+.++.-+++|++.||.|||++ .|+|||||+.||+++-+|.++++|||.+........
T Consensus 111 C~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q 185 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ 185 (1187)
T ss_pred cCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence 99999999987765 5689999999999999999999999 999999999999999999999999999876655555
Q ss_pred Cceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 563 NWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
....+.|||.|||||+++ ..+|+.++||||||+++.||..+.+|.....+++..... ...-.+.+.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi-----aKSePPTLl---- 256 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-----AKSEPPTLL---- 256 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH-----hhcCCCccc----
Confidence 567789999999999865 567999999999999999999999997654443321110 011111121
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+......+.+++.+||.+||..||++.|+++
T Consensus 257 qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 257 QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 22345567999999999999999999999985
No 263
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.2e-36 Score=309.83 Aligned_cols=262 Identities=22% Similarity=0.296 Sum_probs=201.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|+..+.||+|+||.||+|... +|+.||+|.+...... .......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999764 6899999998765332 122345677899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+ +|+|.+++.... ..+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 889999997653 3589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc------cc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS------LN 625 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~------~~ 625 (673)
.........+++.|+|||.+.+ ..++.++|||||||++|||++|..||......+..... .... ..
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 4444444556788999998864 45788999999999999999998777533221100000 0000 00
Q ss_pred cccCCC--CCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 626 EILDPR--LPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 626 ~~~~~~--~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
...... ...+ .......+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000 0000 00112234568899999999999999999999864
No 264
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.7e-36 Score=307.17 Aligned_cols=250 Identities=25% Similarity=0.379 Sum_probs=203.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .+++.||+|.+... .....+.+..|+.+++.++|||++++++++..++..++|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 6788999999999999999965 46889999987543 2223567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred ecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 999999999999753 367889999999999999999999 9999999999999999999999999998766544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||.+....++.++||||||+++||+++|+.||.......... .....+.... ....
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-------~~~~~~~~~~--~~~~ 239 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNGTPEL--QNPE 239 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-------ehhcCCCCCC--CCcc
Confidence 444444568889999999988889999999999999999999999997432211100 0000111111 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+..+.+++.+||+.+|++||++.+++..
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 334568899999999999999999999863
No 265
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2e-36 Score=302.45 Aligned_cols=252 Identities=28% Similarity=0.405 Sum_probs=202.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +++.|++|.++..... ....+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 4788899999999999999764 6899999998765333 3457889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... .+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 80 YCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred cCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999998653 478889999999999999999999 99999999999999999999999999998765433
Q ss_pred CCce----ecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 562 SNWT----EFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 562 ~~~~----~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.... ...++..|+|||++.+.. ++.++||||||+++||+++|+.||........ .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~------~~~~~~~~~~~~~ 227 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ------IMFHVGAGHKPPI 227 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH------HHHHHhcCCCCCC
Confidence 3221 345788999999988766 88999999999999999999999864321000 0000000111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+. ....+..+.+++.+||+.+|.+||++.|++.
T Consensus 228 ~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Cc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 1123456889999999999999999999875
No 266
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-36 Score=302.51 Aligned_cols=247 Identities=29% Similarity=0.472 Sum_probs=198.9
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|.+.+.||+|+||.||++.. .++.||+|.+.... ....+.+|+.++.+++|||++++++++..+ ..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 4688899999999999999975 68889999886431 245788999999999999999999998764 4789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 79 LMSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred CCCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 9999999999976542 3578899999999999999999998 9999999999999999999999999999764322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......+..|+|||++.+..++.++||||||+++|||++ |+.||......+. .+.+....... ...
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---------~~~~~~~~~~~--~~~ 220 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV---------KECVEKGYRME--PPE 220 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH---------HHHHhCCCCCC--CCC
Confidence 122334578999999988899999999999999999997 9999864322111 01111111111 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+..+.+++.+||+.+|++||+++++++.|++
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 334568899999999999999999999999874
No 267
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.6e-37 Score=311.25 Aligned_cols=247 Identities=25% Similarity=0.374 Sum_probs=198.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+....||+|+||.||+|... +++.||+|.+..... ...+.+.+|+..+..++|||++++++++..++..++|+||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 444567999999999999764 689999999864322 2356688999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 100 ~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 100 LQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred CCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 999999998765 3478899999999999999999999 999999999999999999999999999876544433
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......++..|+|||++.+..++.++||||||+++|||++|+.||......+... ........... .....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~ 243 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-----RLRDSPPPKLK----NAHKI 243 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHhccCCCCcc----ccCCC
Confidence 3344668899999999998889999999999999999999999986332211100 00000000111 11122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+..+.+++.+||+.+|++||++.++++
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 345889999999999999999999987
No 268
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.9e-36 Score=302.77 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=196.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchh--hhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLL--SEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 476 (673)
.+|+..+.||+|+||.||+|... +|+.||+|++..... ........+.+|+.++++++||||+++++++.+ +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999764 689999998864322 122345678899999999999999999999865 3567
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++++|.+++.... .+++.....++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999997653 478889999999999999999998 999999999999999999999999999976
Q ss_pred cCCCC---CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... .......++..|+|||++.+..++.++||||+||++|||++|+.||.......... ........+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~-- 229 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF----KIATQPTNPQ-- 229 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH----HHhcCCCCCC--
Confidence 54321 11223457889999999998889999999999999999999999987432211110 0000000111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+.+++ .||..+|++||+++|+++
T Consensus 230 ----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 230 ----LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1122334466676 688899999999999975
No 269
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.9e-36 Score=301.75 Aligned_cols=238 Identities=25% Similarity=0.406 Sum_probs=188.6
Q ss_pred ceeccCCcEEEEEEEeCCCC-----------EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 408 QCIGIGGQASVYRGELPSGE-----------VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
+.||+|+||.||+|.+.+.. .|++|.+.... . ....+.+|+.++++++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---R-DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---h-hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999775432 57778765432 1 15788899999999999999999999988 778
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-------ceEEe
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-------EARVS 549 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-------~~kl~ 549 (673)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+|++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 99999999999999998754 2578899999999999999999999 999999999999999887 79999
Q ss_pred cccceeecCCCCCCceecccccccccccccccC--CcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
|||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||......+. .....
T Consensus 151 Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-----~~~~~- 220 (259)
T cd05037 151 DPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-----ERFYQ- 220 (259)
T ss_pred CCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-----HHHHh-
Confidence 9999986543 2234566789999998876 78999999999999999999 5777653321100 00000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....+.+. ...+.+++.+||..+|.+|||+.++++.|+
T Consensus 221 -~~~~~~~~~------~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 -DQHRLPMPD------CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -cCCCCCCCC------chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 011111111 146889999999999999999999999874
No 270
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.4e-37 Score=340.76 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=199.0
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCe
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRH 475 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 475 (673)
...++|.+.+.||+|+||+||+|... ++..||+|.+...... ......+..|+.++..++|||||+++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 34468999999999999999999765 5778999988654322 2346778999999999999999999998854 456
Q ss_pred eeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCC----CCeEEecCCCCCeEeCCC-------
Q 005864 476 SFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCF----PPIVHRDISSKNVLLSSE------- 543 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivH~dlk~~Nill~~~------- 543 (673)
.++||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+... .+|+||||||+|||++.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 899999999999999997532 22458999999999999999999998521 259999999999999642
Q ss_pred ----------CceEEecccceeecCCCCCCceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 544 ----------YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 544 ----------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
..+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 348999999998664322 2234578999999999854 458899999999999999999999997432
Q ss_pred cccccccccccccccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 612 LLSSSSSNMNLSLNEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.... ....+.. +.++. ...+.++.++|..||+.+|.+||++.|+++
T Consensus 248 ~~~q-------li~~lk~~p~lpi-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 NFSQ-------LISELKRGPDLPI-----KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cHHH-------HHHHHhcCCCCCc-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 2111 1111111 11111 122456889999999999999999999984
No 271
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.6e-37 Score=309.60 Aligned_cols=262 Identities=24% Similarity=0.363 Sum_probs=203.4
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
+.++++..+.++|++.+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++.++ +|||+++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 34456666788999999999999999999976 468899999886431 1245677899999999 89999999999
Q ss_pred eecC-----CeeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 470 CSHP-----RHSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 470 ~~~~-----~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+... +..++|+||+++|+|.++++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.+
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 8653 35799999999999999986421 224588999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccccC-----CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+.+||+|||++..............++..|+|||.+... .++.++|||||||++|||++|+.||...........
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 999999999988664433333345678899999987543 368899999999999999999999864322111000
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.+.. .......+.+++.+||+.+|++||++.|+++
T Consensus 245 -----~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 245 -----IPRNPPPTLLH----PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -----HhcCCCCCCCc----ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00000011111 1123346889999999999999999999986
No 272
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-36 Score=305.80 Aligned_cols=257 Identities=26% Similarity=0.317 Sum_probs=199.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 479 (673)
+|+..+.||.|++|.||+|... +++.+|+|.+..... ......+.+|++++++++||||+++++++.. .+..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 5778899999999999999774 688999998865422 2346778999999999999999999999865 3468999
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||+++++|.+++.... ....+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999999876422 224578889999999999999999999 99999999999999999999999999987553
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC---CCCCCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD---PRLPLP 635 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 635 (673)
... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||+........ .........+ +.+...
T Consensus 157 ~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd06621 157 NSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG---PIELLSYIVNMPNPELKDE 231 (287)
T ss_pred ccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCC---hHHHHHHHhcCCchhhccC
Confidence 222 12345788999999999889999999999999999999999998744220000 0000111111 111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+..+.+++.+||+.+|++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1111223457899999999999999999999986
No 273
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=9.8e-37 Score=316.52 Aligned_cols=259 Identities=22% Similarity=0.317 Sum_probs=195.7
Q ss_pred HHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC----
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP---- 473 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 473 (673)
...++|.+.+.||+|+||+||+|.. .+++.||||++...... ....+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 3457899999999999999999975 46889999998754322 22345677899999999999999999987543
Q ss_pred --CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 474 --RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 474 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
...++++|++ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468999987 67999887643 488999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLS 623 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~ 623 (673)
|+++..... .....+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.... .....
T Consensus 163 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 163 GLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred ccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999865432 234568999999999876 5688999999999999999999999864322111000 00000
Q ss_pred cccc-------cCCCCCC-CCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEI-------LDPRLPL-PSRN----IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~-------~~~~~~~-~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+ ....++. +... .......+.+++.+|++.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 0000000 0000 0112235789999999999999999999985
No 274
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.3e-36 Score=305.86 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=201.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC---
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR--- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~--- 474 (673)
++++|++.+.||+|++|.||+|... +++.|++|.+..... ..+.+.+|+.+++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 5678999999999999999999775 688999998865422 346788999999999 7999999999996544
Q ss_pred ---eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 475 ---HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 475 ---~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 4899999999999999987532 124688999999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCCCceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
||.+..............++..|+|||++.. ..++.++||||||+++|||++|+.||........ ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--------~~ 228 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--------LF 228 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--------HH
Confidence 9999876544333445668899999998753 3467899999999999999999999864322111 01
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++.....+ ........+..+.+++.+||..||++|||+.|+++
T Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRNPPP-TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HhhccCCC-CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111110 01111224557889999999999999999999986
No 275
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.7e-36 Score=301.65 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=203.4
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 479 (673)
+|++.+.||.|+||.||+|.. .+|+.||+|.+..... .....+.+..|++++++++||||+++++++.. +...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 477889999999999999965 4688999998865432 23345678899999999999999999998764 4567899
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHh-----hcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMH-----HDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+||+++++|.+++.... ....+++..++.++.|++.|++||| +. +++|+||+|+||++++++.+|++|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 99999999999997642 2356899999999999999999999 66 999999999999999999999999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+..............+++.|+|||.+.+..++.++||||||+++|+|++|+.||+..... .....+.....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 228 (265)
T cd08217 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--------QLASKIKEGKFR 228 (265)
T ss_pred cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--------HHHHHHhcCCCC
Confidence 987755443334457889999999999888999999999999999999999998743211 111111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
. .....+..+.+++.+|++.+|++||++.+|++.
T Consensus 229 ~---~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 R---IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred C---CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1 112334568899999999999999999999863
No 276
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.9e-36 Score=303.31 Aligned_cols=248 Identities=26% Similarity=0.401 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+-|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|+..+.+++||||+++++++..++..++||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 3477888999999999999976 468999999876432 2234567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 82 EYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 999999999998753 478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||++.+..++.++|||||||++|+|++|..||........ ...+.....+ ....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~---~~~~ 223 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV--------LFLIPKNNPP---TLEG 223 (277)
T ss_pred hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH--------HHHHhcCCCC---CCCc
Confidence 3333445678899999999888899999999999999999999999863321110 0001011111 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.+|.+||++.++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 33456889999999999999999999987
No 277
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.9e-37 Score=333.20 Aligned_cols=255 Identities=25% Similarity=0.386 Sum_probs=201.4
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC---
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--- 473 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--- 473 (673)
.+...+|+..+.||+||||.||+++.+ ||+.||||++.... .......+.+|+..+.+++|||||+++..|.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 467778899999999999999999876 89999999997764 445577889999999999999999997543110
Q ss_pred --------------------------------------------------------------------------------
Q 005864 474 -------------------------------------------------------------------------------- 473 (673)
Q Consensus 474 -------------------------------------------------------------------------------- 473 (673)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ------------------------------------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHH
Q 005864 474 ------------------------------------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517 (673)
Q Consensus 474 ------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l 517 (673)
...||-||||+..++.++++...-.. .....++++.+|+.|+
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGL 710 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHH
Confidence 01378899999988888887653211 4577889999999999
Q ss_pred HHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC------------------CCCCCceeccccccccccccc
Q 005864 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK------------------PGSSNWTEFAGTFGYVAPELA 579 (673)
Q Consensus 518 ~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~------------------~~~~~~~~~~~~~~y~aPE~~ 579 (673)
+|+|++ |||||||||.|||++++..|||+|||+|.... .+....+..+||.-|+|||.+
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 011134567899999999998
Q ss_pred ccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccC
Q 005864 580 YTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEE 656 (673)
Q Consensus 580 ~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 656 (673)
.+.. |+.|+|+||+|+|++||+. ||...- + ....+....++.++.+...+......-..+|.+++++
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--E-----Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--E-----RASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchH--H-----HHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcC
Confidence 7654 9999999999999999994 454211 0 1122334446666666555555556677899999999
Q ss_pred CCCCCCCHHHHHH
Q 005864 657 SPESRPTMQTVCQ 669 (673)
Q Consensus 657 dp~~Rps~~~v~~ 669 (673)
||.+|||+.|++.
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999985
No 278
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.3e-36 Score=300.92 Aligned_cols=251 Identities=26% Similarity=0.413 Sum_probs=207.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|++|.||+|... +|+.|++|++...... ...+.+.+|+..+.+++|||++++++++..++..++|+|
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 6888899999999999999776 5999999998764322 346789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++... ..+++..+..++.|+++|++|||+ . +++|+||+|+||+++.++.++++|||.+......
T Consensus 80 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 80 YMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred ecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 99999999999865 357889999999999999999999 8 9999999999999999999999999999877554
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........+.....+.. ..
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~---~~ 225 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP-----SFFELMQAICDGPPPSL---PA 225 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc-----CHHHHHHHHhcCCCCCC---Cc
Confidence 44434556788999999999888999999999999999999999998744310 00011111111111111 11
Q ss_pred H-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 D-KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~-~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .+..+.+++.+||+.+|++||++.|+++
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 226 EEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1 4456999999999999999999999986
No 279
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4e-36 Score=299.20 Aligned_cols=250 Identities=29% Similarity=0.459 Sum_probs=200.8
Q ss_pred CCccceeccCCcEEEEEEEeCC-----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+++.+.||.|+||.||++...+ +..||+|.+...... ...+.+..|+..+..++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 3567889999999999997753 488999998654222 246789999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 79 i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 9999999999999976532 1289999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCce-ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCC
Q 005864 559 PGSSNWT-EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLP 635 (673)
Q Consensus 559 ~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 635 (673)
....... ...+++.|+|||.+.+..++.++||||+|+++|||++ |..||....... ....+.... ...+
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~ 226 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE--------VLEYLKKGYRLPKP 226 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhcCCCCCCC
Confidence 4322211 2336789999999988889999999999999999998 788876321111 011111111 1111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
...+.++.+++.+|+..||++|||+.|+++.|
T Consensus 227 ----~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 ----ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 12345688999999999999999999999875
No 280
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-36 Score=304.61 Aligned_cols=253 Identities=24% Similarity=0.374 Sum_probs=203.3
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|++.+++++||||+++++++..++..++++|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 5778899999999999999775 689999998876432 2346778899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 80 YMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred ecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 999999999998653 457888999999999999999999 7 9999999999999999999999999998765322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.. ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ...............+... ..
T Consensus 155 ~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~ 227 (265)
T cd06605 155 LA--KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP---DGIFELLQYIVNEPPPRLP--SG 227 (265)
T ss_pred Hh--hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc---ccHHHHHHHHhcCCCCCCC--hh
Confidence 21 12667889999999998899999999999999999999999986432100 0001111112222111110 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||..+|++|||+.|+++
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 14556899999999999999999999985
No 281
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3e-36 Score=300.04 Aligned_cols=249 Identities=27% Similarity=0.381 Sum_probs=201.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|+..+.||+|+||.||+|... +++.|++|.+...... ..+..+.+.+|+++++.++||||+++++++..+...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999776 7999999988653321 233457789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997653 478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC-CCCCCCCc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSR 637 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 637 (673)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||......... ..... ...+.
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~--------~~~~~~~~~~~--- 222 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV--------FKIGRSKELPP--- 222 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH--------HHHHhcccCCC---
Confidence 32 223456788999999987766 899999999999999999999998643211110 00000 01111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+.+++.+||+.+|++||++.++++
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11123456889999999999999999999975
No 282
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.4e-36 Score=302.14 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=199.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh-------hHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE-------ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
+|...+.||+|+||.||+|... +|+.||+|.++...... ....+.+.+|+.++..++|||++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667889999999999999654 68999999886432111 112456888999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+++|+|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999999775 3578889999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC--CceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC
Q 005864 555 KFLKPGSS--NWTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 555 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
........ ......++..|+|||.+.... ++.++||||+|+++||+++|..||........... .... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~--~~ 229 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFK----LGNK--RS 229 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHH----hhcc--cc
Confidence 76533211 122345788999999987654 78999999999999999999999863322111000 0000 01
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.......+.++.+++.+||+.+|++||+++||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111111222234567899999999999999999999986
No 283
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-36 Score=307.25 Aligned_cols=260 Identities=19% Similarity=0.292 Sum_probs=197.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +|+.||+|+++.... .......+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 4788899999999999999775 699999999865322 12234567789999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++ +|.+++.... ..+++..+..++.||++||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 80 YCDQ-DLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred cCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 9975 8888876543 3589999999999999999999999 99999999999999999999999999998665443
Q ss_pred CCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccccccc--------ccccc---ccccccC
Q 005864 562 SNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS--------SNMNL---SLNEILD 629 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--------~~~~~---~~~~~~~ 629 (673)
.......++..|+|||.+.+.. ++.++|||||||++|||++|+.|+.......... ..... ......+
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 3334456788999999887644 6899999999999999999999864221110000 00000 0000000
Q ss_pred C-CCCCCC------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 P-RLPLPS------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~-~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ..+... ......+.++.+++.+||+.||.+|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 000000 001123456889999999999999999999975
No 284
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4e-36 Score=302.49 Aligned_cols=248 Identities=27% Similarity=0.436 Sum_probs=200.6
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC---CCcccceeeeeecCCeeeE
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR---HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~l 478 (673)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.... .....+++.+|+.++++++ |||++++++++..+...++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 477788999999999999976 578999999886532 2234567888999999997 9999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 80 v~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999998653 578999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..........|+..|+|||++.++ .++.++||||||+++|+|++|+.||.......... .......+.++.
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~--- 224 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-----LIPKSKPPRLED--- 224 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-----ccccCCCCCCCc---
Confidence 544444455788999999988654 46889999999999999999999987432211100 000000111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||+.||++||++.|+++
T Consensus 225 --~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 225 --NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 113456889999999999999999999975
No 285
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.1e-36 Score=305.61 Aligned_cols=260 Identities=20% Similarity=0.309 Sum_probs=196.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|++|.||+|..+ +++.||+|.+...... .....+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 57888999999999999999765 6899999998654222 12345678999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 83 EYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 99985 9999987654 3578899999999999999999999 9999999999999999999999999998754322
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc--------cccccccc------
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS--------SNMNLSLN------ 625 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--------~~~~~~~~------ 625 (673)
........++..|+|||++.+ ..++.++||||+|+++|||++|+.||.......... ......+.
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 222233346788999998865 457899999999999999999999986433110000 00000000
Q ss_pred cccCCCCCCC--Cc---chHHH--HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLP--SR---NIQDK--LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~--~~---~~~~~--~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+......... .. ..... ...+.+++.+|++.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000000 00 00001 145789999999999999999999875
No 286
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.5e-36 Score=305.35 Aligned_cols=252 Identities=27% Similarity=0.420 Sum_probs=206.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
.++.|+..+.||+|++|.||+|.++ +++.|++|.+..... ..+.+.+|++.++.++|+|++++++++..++..++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 4567888899999999999999776 689999999865422 35678899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999998754 3689999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........++..|+|||++.+..++.++||||||+++|+|++|+.||......... ..+.....+ ....
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~--------~~~~~~~~~-~~~~ 238 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL--------FLITTKGIP-PLKN 238 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH--------HHHHhcCCC-CCcc
Confidence 4333334455788999999998888999999999999999999999998643222110 011111111 0011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+..+.+++.+||+.+|.+||++.++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1223456889999999999999999999985
No 287
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=9.3e-37 Score=303.67 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=204.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||.|+||.||+|... +++.||+|.+...........+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999775 699999999876544444457789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... ..+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999999765 3578899999999999999999999 99999999999999999999999999988664332
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC-CCCCCCCcchH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNIQ 640 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 640 (673)
......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... .......... .....+ .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~----~ 223 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQETADVLYP----A 223 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhccccccCc----c
Confidence 233456788999999998888999999999999999999999998743221 0001111111 111211 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH--HHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTM--QTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~--~~v~~ 669 (673)
..+..+.+++.+||+.||.+||++ +|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 233568899999999999999999 77653
No 288
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.7e-36 Score=305.95 Aligned_cols=262 Identities=21% Similarity=0.253 Sum_probs=196.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+++.|.+.+.||+|+||.||+|... +|+.||+|.+...... .....+.+|+.+++.++|+||+++++++..++..++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE--GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC--CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 3467999999999999999999664 6899999998654221 223466789999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||++ +++.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++...
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 999996 68877775432 3467788889999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccc--------ccc----------
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS--------SSN---------- 619 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--------~~~---------- 619 (673)
..........+++.|+|||.+.+. .++.++||||||+++|||++|+.||+........ ...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 333333344578899999998754 5788999999999999999999999743221000 000
Q ss_pred cccccccccCCCCCCCC-cch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 MNLSLNEILDPRLPLPS-RNI--QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+......+... ..+ ......+.+++.+|++.||++|||++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000000 000 011346889999999999999999999874
No 289
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-36 Score=319.35 Aligned_cols=253 Identities=21% Similarity=0.249 Sum_probs=195.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
.+|.+.+.||+|+||.||++... .++.||+|.+... +...+|++++++++||||+++++++......++
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 57999999999999999999653 4678999987542 234579999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||++. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 164 v~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred EehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 999986 5888888543 4589999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-----------------cc
Q 005864 559 PGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-----------------SN 619 (673)
Q Consensus 559 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-----------------~~ 619 (673)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 4322 1234578999999999999899999999999999999999999986432210000 00
Q ss_pred cc----cc---cccccCCCCCCCCc-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 MN----LS---LNEILDPRLPLPSR-NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 ~~----~~---~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. .. ......+....+.. .......++.+++.+||..||++|||+.|++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 00 00000111111000 00112346788999999999999999999985
No 290
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5e-36 Score=306.25 Aligned_cols=248 Identities=26% Similarity=0.405 Sum_probs=198.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|+..+.||+|+||+||+|... +|+.||+|.+...........+++.+|+++++.++||||+++++++..++..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999765 68999999886543333344567899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++ |++.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 47877776433 3588999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
....++..|+|||.+. ...++.++||||||+++|||++|+.||......... ..+.....+ ..
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~--------~~~~~~~~~--~~ 234 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--------YHIAQNDSP--TL 234 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH--------HHHhcCCCC--CC
Confidence 2345788999999874 456888999999999999999999998643221110 000000000 01
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 235 SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11234456899999999999999999999986
No 291
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.1e-36 Score=326.27 Aligned_cols=260 Identities=19% Similarity=0.211 Sum_probs=190.5
Q ss_pred HHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC------Ccccceee
Q 005864 396 EIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH------RNIVKFYG 468 (673)
Q Consensus 396 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~ 468 (673)
++....++|++.+.||+|+||+||+|... .++.||||+++... ...+.+..|++++..++| ++++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 33445678999999999999999999764 58889999986421 123345567777766654 45889999
Q ss_pred eeecC-CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCC--
Q 005864 469 FCSHP-RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEY-- 544 (673)
Q Consensus 469 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~-- 544 (673)
++..+ ...++|||++ +++|.+++...+ .+++..+..|+.||+.||+|||+ . +|+||||||+||+++.++
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcc
Confidence 88764 5688999987 668999887653 48889999999999999999997 5 999999999999998765
Q ss_pred --------------ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccc
Q 005864 545 --------------EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 610 (673)
Q Consensus 545 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 610 (673)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+..
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999876432 2234567899999999999999999999999999999999999999753
Q ss_pred cccccccc-------cccc--------ccccccCCC--CC--CCCc-----------chHHHHHHHHHHHHHcccCCCCC
Q 005864 611 SLLSSSSS-------NMNL--------SLNEILDPR--LP--LPSR-----------NIQDKLISILEVALLCLEESPES 660 (673)
Q Consensus 611 ~~~~~~~~-------~~~~--------~~~~~~~~~--~~--~~~~-----------~~~~~~~~l~~li~~cl~~dp~~ 660 (673)
...+.... .... ...+.++.. +. .... ........+.+|+.+||+.||++
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 32111000 0000 000000000 00 0000 00011245789999999999999
Q ss_pred CCCHHHHHH
Q 005864 661 RPTMQTVCQ 669 (673)
Q Consensus 661 Rps~~~v~~ 669 (673)
|||++|+++
T Consensus 429 R~ta~e~L~ 437 (467)
T PTZ00284 429 RLNARQMTT 437 (467)
T ss_pred CCCHHHHhc
Confidence 999999985
No 292
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.4e-36 Score=297.33 Aligned_cols=250 Identities=21% Similarity=0.306 Sum_probs=201.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +++.+|+|.+...... ....+.+.+|++++++++|||++++++.+..++..++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 4788899999999999999664 6889999998654322 2346789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++.... ...+++..+..++.++++|++|||++ +++|+||+|+||+++++ +.++++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 80 YAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred cCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999997643 24578899999999999999999999 99999999999999865 46899999999876443
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||+...... ....+....... ...
T Consensus 156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~ 223 (256)
T cd08220 156 SK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--------LVLKIMSGTFAP---ISD 223 (256)
T ss_pred cc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--------HHHHHHhcCCCC---CCC
Confidence 22 233567889999999988889999999999999999999999986432111 111111111110 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||+.+|.+|||+.|+++
T Consensus 224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 23446889999999999999999999986
No 293
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.4e-36 Score=302.83 Aligned_cols=247 Identities=25% Similarity=0.283 Sum_probs=195.8
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||+||+|... +|+.||+|.+.............+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999654 6899999998764433333455677899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.+...... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 999976543 4588999999999999999999999 9999999999999999999999999998765432 2223345
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
++..|+|||++.+..++.++||||+|+++|+|++|+.||......... ............. .....+..+.+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~ 227 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK----EELKRRTLEMAVE----YPDKFSPEAKD 227 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH----HHHHhcccccccc----CCccCCHHHHH
Confidence 778999999998888999999999999999999999998643321110 0000111111111 11223456889
Q ss_pred HHHHcccCCCCCCC-----CHHHHHH
Q 005864 649 VALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 649 li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
++.+||+.||++|| ++.++++
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHh
Confidence 99999999999999 6666654
No 294
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.7e-36 Score=308.25 Aligned_cols=194 Identities=20% Similarity=0.354 Sum_probs=159.3
Q ss_pred cceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEEEe
Q 005864 407 EQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLVYE 481 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 481 (673)
...||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 357999999999999764 45789999886432 13457789999999999999999999853 557789999
Q ss_pred cccCCChHHHHhcCC------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----CCCCceEEecc
Q 005864 482 CLERGSLAEILSNDG------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL----SSEYEARVSDF 551 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Df 551 (673)
|+++ +|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9875 8888775321 123578899999999999999999999 99999999999999 45678999999
Q ss_pred cceeecCCCCC---Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 552 GIAKFLKPGSS---NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 552 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|+++....... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99987644322 2234568899999999876 4578999999999999999999999863
No 295
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.3e-36 Score=313.37 Aligned_cols=191 Identities=19% Similarity=0.307 Sum_probs=164.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
..+|++.+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++..+...++|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 457999999999999999999775 5788999974332 234689999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+. ++|.+++.... ..+++..+..|+.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 136 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 99996 58998887643 4589999999999999999999999 999999999999999999999999999975332
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCC
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 607 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~ 607 (673)
. .......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 210 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 210 A-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred C-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 2 2223456899999999999999999999999999999999865553
No 296
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.2e-36 Score=302.53 Aligned_cols=248 Identities=25% Similarity=0.383 Sum_probs=199.3
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|...+.||+|++|.||+|.. .+++.|++|++... .....+.+.+|+.+++.++||||+++++++..++..++|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 355567899999999999976 47889999987543 22234568899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+.......
T Consensus 97 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 97 FLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred ccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99999999998762 378899999999999999999999 99999999999999999999999999887654333
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||...+..++.++||||||+++|||++|+.||.......... .......+... ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-----~~~~~~~~~~~----~~~~ 240 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-----RIRDNLPPKLK----NLHK 240 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-----HHHhcCCCCCc----cccc
Confidence 33344568899999999988889999999999999999999999986432211100 00000011111 1112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.+|++||++.++++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 3456899999999999999999999985
No 297
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=5.2e-36 Score=299.53 Aligned_cols=250 Identities=23% Similarity=0.332 Sum_probs=197.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchh--hhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Cee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLL--SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 476 (673)
.+|++.+.||+|+||.||+|... +|+.||+|.+..... ......+.+.+|+.++++++||||+++++++.++ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999764 589999998753221 1223456788999999999999999999998763 467
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999997653 367888899999999999999999 999999999999999999999999999976
Q ss_pred cCCCC---CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc-CCCC
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL-DPRL 632 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 632 (673)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||........ ..+.. .+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~ 227 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--------IFKIATQPTN 227 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--------HHHHhcCCCC
Confidence 53211 112334578899999999888899999999999999999999999864321111 01111 1111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+ .........+.+++.+|+. +|++||+++|+++
T Consensus 228 ~---~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 228 P---VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred C---CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1 1122344567889999995 9999999999985
No 298
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.1e-36 Score=299.19 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=201.8
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh---hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS---EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+|+..+.||+|++|.||+|.. .+++.||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999965 57899999988643321 12245788999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceeec
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFL 557 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 557 (673)
|+||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 99999999999999764 3578899999999999999999999 999999999999998775 5999999999876
Q ss_pred CCCCC----CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 558 KPGSS----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 558 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... ......++..|+|||.+.+..++.++||||+|+++|+|++|..||........ .....+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~- 228 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-----LALIFKIASATT- 228 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-----HHHHHHHhccCC-
Confidence 43311 11234678899999999888899999999999999999999999863321110 000111100011
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+.++.+++.+|+..+|.+||++.++++
T Consensus 229 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 -APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 11122334567889999999999999999999975
No 299
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.9e-36 Score=306.02 Aligned_cols=258 Identities=21% Similarity=0.268 Sum_probs=199.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 478 (673)
++|+..+.||+|+||.||+|..+ +++.+|+|.++..... ......+.+|+.++.+++||||+++++++..+ +..++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 46888899999999999999775 6889999998754322 22344677899999999999999999999877 88999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 84 v~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999985 9999987654 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc---------
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN--------- 621 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~--------- 621 (673)
..........+++.|+|||.+.+.. ++.++|+||+|+++|||++|+.||............ ..
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 4433334456788999999887544 688999999999999999999998643221100000 00
Q ss_pred -----cccccccCCCCCCCCcchHH--HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 -----LSLNEILDPRLPLPSRNIQD--KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 -----~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+. ...+. ....+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLR---KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhh---ccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000 00111 2456889999999999999999999985
No 300
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.7e-36 Score=304.70 Aligned_cols=260 Identities=22% Similarity=0.280 Sum_probs=198.3
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++.+.||.|++|.||+|... +|+.||+|++...... ....+.+.+|+++++.++|||++++++++.+++..+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 567889999999999999764 7999999998654222 22345688899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
++ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 80 LD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 95 699999876542 3589999999999999999999999 999999999999999999999999999976543333
Q ss_pred CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccc------cccc--
Q 005864 563 NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNL------SLNE-- 626 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~------~~~~-- 626 (673)
......++..|+|||++.+. .++.++||||||+++|||++|+.||........... .... ...+
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 33334568899999987654 468899999999999999999999864322110000 0000 0000
Q ss_pred --ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 --ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 --~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
................+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000111123356889999999999999999999985
No 301
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.5e-36 Score=305.11 Aligned_cols=261 Identities=23% Similarity=0.330 Sum_probs=198.0
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||.|++|.||+|... +|+.||||++...... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 4788899999999999999765 6899999988654322 2234578899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+. ++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+|++|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 80 FLH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred ccc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 996 589998876432 4588999999999999999999999 99999999999999999999999999987664433
Q ss_pred CCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------ccc---cccccC-
Q 005864 562 SNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLS---LNEILD- 629 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~---~~~~~~- 629 (673)
.......++..|+|||.+.+.. ++.++||||||+++|||+||+.||......+...... ... ......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 3334445688999999887644 5889999999999999999999986432211000000 000 000000
Q ss_pred -CCCCC-CC----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 -PRLPL-PS----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 -~~~~~-~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..++. .. ........++.+++.+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000 00 000112345789999999999999999999985
No 302
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.9e-36 Score=300.05 Aligned_cols=251 Identities=23% Similarity=0.326 Sum_probs=202.3
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|...+.||+|+||.||+|... +|..||+|.+...... ....+.+.+|+++++.++|+||+++++++..++..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4778899999999999999765 5889999998653221 2235678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++..... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++ .++++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 80 YCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999999976432 3578999999999999999999999 999999999999999885 4699999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||+..+..++.++||||||+++|||++|+.||......+. ..+........ ...
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~---~~~ 224 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL--------VLKICQGYFAP---ISP 224 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH--------HHHHhcccCCC---CCC
Confidence 3333445688899999999888899999999999999999999999864322111 11111111111 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||..+|++|||+.|+++
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 22345889999999999999999999986
No 303
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-37 Score=312.50 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=195.3
Q ss_pred ccceeccCCcEEEEEEEe-CCCCEEEEEeecc-chhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe--eeEEEe
Q 005864 406 AEQCIGIGGQASVYRGEL-PSGEVVAVKKFHS-LLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH--SFLVYE 481 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~-~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e 481 (673)
...+||+|+|-+||+|.+ .+|..||=-.++. .....+...++|..|+.+|+.|+|||||+++.+|.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 446799999999999955 4687777322211 112334456899999999999999999999999987654 778999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~~ 560 (673)
.|..|+|..|.++.+ ..+......|++||++||.|||++ .|+|+|||||-.|||++.+ |.|||+|.|+|..+...
T Consensus 124 L~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred cccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999999875 477789999999999999999997 4699999999999999875 89999999999987543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......|||.|||||... ..|++.+||||||..++||+|+..||.-.... .....++..+..|.. ...
T Consensus 200 --~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-------AQIYKKV~SGiKP~s--l~k 267 (632)
T KOG0584|consen 200 --HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-------AQIYKKVTSGIKPAA--LSK 267 (632)
T ss_pred --ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-------HHHHHHHHcCCCHHH--hhc
Confidence 344589999999999866 78999999999999999999999998732221 122222332222211 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
-..+++.++|.+|+.. .++|||+.|+++
T Consensus 268 V~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 VKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred cCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1234689999999999 889999999985
No 304
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.3e-36 Score=352.76 Aligned_cols=317 Identities=38% Similarity=0.569 Sum_probs=282.5
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
.|++++.+|..++++++|++|+|++|.+++..|..+.++++|++|+|++|.+.+..|..+..+++|+.|++++|.+.+..
T Consensus 245 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 324 (968)
T PLN00113 245 YNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKI 324 (968)
T ss_pred CceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
+..+..+++|+.|+|++|.+.+..+..++.+++|+.|++++|++++..|..+..+++|+.|++++|.+.+..|..+..++
T Consensus 325 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~ 404 (968)
T PLN00113 325 PVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACR 404 (968)
T ss_pred ChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCC
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccc-----------------------cccEEEccC
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLL-----------------------KVHYLNLSN 217 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~-----------------------~L~~L~l~~ 217 (673)
+|+.|++++|.+++..|..+..+++|+.|++++|.+++.++..+..++ +|+.|++++
T Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 484 (968)
T PLN00113 405 SLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSR 484 (968)
T ss_pred CCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcC
Confidence 999999999999988888888888888888888888766665444433 456666677
Q ss_pred CcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 218 n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|++++..|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++.+|
T Consensus 485 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred CccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 77777778888888999999999999998999999999999999999999999999999999999999999999999888
Q ss_pred CCc-ccccCccccccCCcCCC
Q 005864 298 NST-GFQYDPIQALRGNRGLC 317 (673)
Q Consensus 298 ~~~-~~~~~~~~~~~~n~~~c 317 (673)
... .........+.+|+..+
T Consensus 565 ~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 565 KNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred hhHhcCcccCEEeccCCccee
Confidence 743 33445556667776554
No 305
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.2e-36 Score=301.42 Aligned_cols=260 Identities=24% Similarity=0.357 Sum_probs=200.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|+||.||+|... +|+.||+|++...... ......+.+|+.++++++|||++++++++..+...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 4788899999999999999764 6899999998764322 2335678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+ +++|.+++.... ..+++.++..++.|+++||+|||+. +++|+||+|+||++++++.++++|||.+.......
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99 999999987654 4589999999999999999999999 99999999999999999999999999998765433
Q ss_pred C-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc---------
Q 005864 562 S-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS--------- 623 (673)
Q Consensus 562 ~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~--------- 623 (673)
. ......++..|+|||.+.+. .++.++||||+|+++|||++|..||............ ....
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 2 23345688899999988654 4688999999999999999998887532211100000 0000
Q ss_pred cccccCCCC-CCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRL-PLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~-~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.. ..+ .....+....+.+++.+|++.+|++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 000 0001123467899999999999999999999986
No 306
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.5e-35 Score=297.68 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=197.1
Q ss_pred CCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----
Q 005864 404 FDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----- 474 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 474 (673)
|.+.+.||+|+||+||+|.+. +++.||||.+...... ....+++.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 567789999999999999653 4688999998654322 234677889999999999999999999886532
Q ss_pred -eeeEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 475 -HSFLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 475 -~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
..++++||+++|+|.+++.... ....+++.....++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 2478999999999998875321 223478889999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 551 FGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 551 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
||.++....... ......+++.|++||......++.++||||||+++|||++ |+.||......+ ....+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--------~~~~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--------IYNYL 228 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--------HHHHH
Confidence 999986643221 1122345678999999988889999999999999999999 888876332111 00011
Q ss_pred cCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
... ....+. ..+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 229 ~~~~~~~~~~----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 229 IKGNRLKQPP----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HcCCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 111 111111 233468999999999999999999999999864
No 307
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.6e-36 Score=302.62 Aligned_cols=261 Identities=21% Similarity=0.319 Sum_probs=200.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||.|++|.||+|... +|+.||+|.++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4788999999999999999875 689999999875432 2234567789999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++ +|.+++........+++..+..++.|++.||+|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9985 8999887655445689999999999999999999999 99999999999999999999999999997654333
Q ss_pred CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc-----ccc
Q 005864 562 SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN-----EIL 628 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~-----~~~ 628 (673)
.......++..|+|||.+.+. .++.++||||||+++|||++|+.||......+..... ....+. ...
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 333344568899999987654 4688999999999999999999998744321110000 000000 000
Q ss_pred CCCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DPRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+... ......+..+.+++.+|++.||.+||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 01111000 001123456889999999999999999999975
No 308
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-36 Score=305.55 Aligned_cols=249 Identities=24% Similarity=0.364 Sum_probs=211.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|.+...||+|.|++|..|++. +|..||+|.+.+....... .+.+.+|+++|..++|||||+++.+...+...|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 356888999999999999999764 6999999999876555443 44588999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+.+|.+++++..++. ..+..+..++.|+.+|++|||++ .|||||||++||+++.+.++||+|||++..+..
T Consensus 134 ~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 999999999999998864 34477888999999999999999 999999999999999999999999999998874
Q ss_pred CCCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
........|++.|.|||.+.+..| ++++|+||+|+++|.|+.|..||++... .+.-...+..++..+..-
T Consensus 208 -~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--------k~Lr~rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 208 -GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--------KELRPRVLRGKYRIPFYM 278 (596)
T ss_pred -cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--------ccccchheeeeeccccee
Confidence 344566889999999999998876 5799999999999999999999995432 333344555566554332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .+..+++.+++..+|.+|++++++++
T Consensus 279 s----~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 279 S----CDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred e----chhHHHHHHhhccCccccCCHHHhhh
Confidence 2 23678899999999999999999875
No 309
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.8e-36 Score=304.55 Aligned_cols=261 Identities=26% Similarity=0.373 Sum_probs=201.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +++.||+|.++.... .....+.+.+|++++++++|+||+++++++..++..++|+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 36888999999999999999775 588999998865322 2234577899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++++.+..+.... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 80 EYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999987777665543 3478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc------ccccccccc-----
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS------NMNLSLNEI----- 627 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~------~~~~~~~~~----- 627 (673)
.. ......++..|+|||++.+. .++.++||||||+++|||++|+.||......+.... .........
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 32 33345678899999999887 789999999999999999999999864321110000 000000000
Q ss_pred -cCC-CCCCCC-------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -LDP-RLPLPS-------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -~~~-~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... .++... ......+.++.+++.+||+.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 000000 001112567999999999999999999999985
No 310
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-37 Score=286.05 Aligned_cols=243 Identities=23% Similarity=0.262 Sum_probs=210.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+++|+|.||+|...+.+ +|+.||+|++++......++......|-.+|+..+||.+..+.-.|+..+..|.||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 57889999999999999999765 69999999999988777788888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||..||.|.-++.+. ..+++.....+-..|..||.|||++ +||.||+|.+|.++|.||.+||.|||+++---..
T Consensus 248 eyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 248 EYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 999999999998765 4588888888999999999999999 9999999999999999999999999999854444
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
....+.++|||.|.|||++....|+.++|.|.+||++|||+.|+.||...+. +....-++-..+.+|...
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------~kLFeLIl~ed~kFPr~l-- 391 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------EKLFELILMEDLKFPRTL-- 391 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--------hHHHHHHHhhhccCCccC--
Confidence 5566778999999999999999999999999999999999999999974322 222333444455554433
Q ss_pred HHHHHHHHHHHHcccCCCCCCC
Q 005864 641 DKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp 662 (673)
+.+...++...+.+||.+|.
T Consensus 392 --s~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 392 --SPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred --CHHHHHHHHHHhhcChHhhc
Confidence 33467788899999999995
No 311
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.8e-36 Score=297.84 Aligned_cols=246 Identities=21% Similarity=0.255 Sum_probs=191.2
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHH-hccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKAL-TEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|... +|+.||+|.+.............+..|..++ ...+|||++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999764 6899999998654332223334455555544 445899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
++|.+++...+ .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++|||++..... ..
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999997653 478889999999999999999999 999999999999999999999999999875432 22
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...++..|+|||...+..++.++||||+|+++|||++|..||....... ............+.......+..
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 223 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA--------VFDNILSRRINWPEEVKEFCSPE 223 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhcccCCCCcccccCCHH
Confidence 3457889999999988888999999999999999999999986432211 11111111111111112234456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
+.+++.+||+.+|++||++.++.+.|
T Consensus 224 ~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 224 AVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHHccCCHHHccCCCcHHHHH
Confidence 89999999999999999876555544
No 312
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.2e-35 Score=296.47 Aligned_cols=243 Identities=28% Similarity=0.377 Sum_probs=198.9
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||.|++|.||+|... +++.||+|.+...........+.+.+|+.+++.++||||+++++++.+++..++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999775 4899999998765444444567899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 99997653 478899999999999999999998 99999999999999999999999999998765432 223346
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISI 646 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 646 (673)
++..|+|||.+.+..++.++|+||+|+++|||++|..||..... ........+.. .....+.. .+.++
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~~~ 223 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNGKLEFPNY----IDKAA 223 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCCCCCCCcc----cCHHH
Confidence 78899999999888899999999999999999999999874321 01111122221 12222211 24568
Q ss_pred HHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 647 LEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+++.+||+.+|++||+ ++|+++
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 99999999999999999 777765
No 313
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-37 Score=298.25 Aligned_cols=248 Identities=25% Similarity=0.285 Sum_probs=207.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.|..-++||+|+||.||-.+.+ +|+.||.|++.+..............|-.++.++..+.||.+--+|.+.+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 456888899999999999998654 6999999999877666666667788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+..|.||+|.-+|...+. ..+++..+..++.+|+.||.+||.. +||.||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999988765 5699999999999999999999999 999999999999999999999999999998865
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC-CCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 638 (673)
+.. ....+||.+|||||++.+..|+...|.||+||++|||+.|+.||.....-. -.+-+|.+ ...+..+
T Consensus 340 g~~-~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv---------k~eEvdrr~~~~~~ey 409 (591)
T KOG0986|consen 340 GKP-IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV---------KREEVDRRTLEDPEEY 409 (591)
T ss_pred CCc-cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh---------hHHHHHHHHhcchhhc
Confidence 443 345699999999999999999999999999999999999999986321111 11111111 1112223
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC
Q 005864 639 IQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
....+.+..++....|.+||++|.
T Consensus 410 ~~kFS~eakslc~~LL~Kdp~~RL 433 (591)
T KOG0986|consen 410 SDKFSEEAKSLCEGLLTKDPEKRL 433 (591)
T ss_pred ccccCHHHHHHHHHHHccCHHHhc
Confidence 344556688889999999999986
No 314
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=8.9e-36 Score=299.71 Aligned_cols=245 Identities=22% Similarity=0.244 Sum_probs=187.4
Q ss_pred eeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHh---ccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 409 CIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALT---EIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
.||+|+||.||+|... +|+.||+|.+.............+.+|..++. ..+|||++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999764 68999999886543332222333444444333 3479999999999999999999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
+|+|.+++...+ .+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++...... ..
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~ 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc--Cc
Confidence 999999987653 589999999999999999999999 9999999999999999999999999998755332 22
Q ss_pred eeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
....|+..|+|||...+ ..++.++||||+||++|||++|..||........ . ...... ...........+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~-~~~~~~---~~~~~~~~~~~~ 223 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----H-EIDRMT---LTVNVELPDSFS 223 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-----H-HHHHHh---hcCCcCCccccC
Confidence 33468999999998864 5688999999999999999999999863321100 0 000000 000111112334
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005864 644 ISILEVALLCLEESPESRP-----TMQTVCQL 670 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rp-----s~~~v~~~ 670 (673)
.++.+++.+||+.||++|| +++|+++.
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 5688999999999999999 69998763
No 315
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=314.96 Aligned_cols=318 Identities=22% Similarity=0.223 Sum_probs=293.8
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
||+|+..-.+.++.++.|++||||.|.|+.+.-.+|..-.++++|+|++|.|+.....+|.++.+|.+|.|+.|+|+.++
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 68899999999999999999999999999777778888889999999999999988999999999999999999999999
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
...|.++++|+.|+|..|.|.-..+-.|.++++|+.|.|..|+|.....++|..+.++++|+|+.|++......++.+++
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccc
Confidence 99999999999999999999977788999999999999999999988888999999999999999999988888899999
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|+.|+|+.|.|..+.++.++..++|++|+|++|.++...+..|..+..|+.|+|+.|.++.+....|..+++|++|||+
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLR 373 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCc
Confidence 99999999999999999999999999999999999998888999999999999999999998778889999999999999
Q ss_pred CCcCCCCCcc---cccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCC
Q 005864 241 HNFLGGEIPP---QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLC 317 (673)
Q Consensus 241 ~N~l~~~~~~---~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 317 (673)
+|.|+..+.+ .|.++++|+.|.|.+|+|..+.-.+|.+++.|++|||.+|.+...-|+++.........+....-+|
T Consensus 374 ~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflC 453 (873)
T KOG4194|consen 374 SNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLC 453 (873)
T ss_pred CCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEE
Confidence 9999865543 5888999999999999999998899999999999999999999999988877666666666666666
Q ss_pred C
Q 005864 318 G 318 (673)
Q Consensus 318 ~ 318 (673)
+
T Consensus 454 D 454 (873)
T KOG4194|consen 454 D 454 (873)
T ss_pred e
Confidence 5
No 316
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.8e-36 Score=298.76 Aligned_cols=246 Identities=24% Similarity=0.349 Sum_probs=198.8
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||.||++... +|+.|++|.+...........+.+.+|++++++++||||+++++.+..++..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 4999999998765444445677899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC------
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS------ 562 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~------ 562 (673)
.+++...+ .+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++++|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99998753 578999999999999999999999 999999999999999999999999999876533211
Q ss_pred --CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 563 --NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 563 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......++..|+|||.......+.++||||||+++||+++|+.||...... .............+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~-- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILNGKIEWPEDV-- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCcCCCccc--
Confidence 223355788999999998888999999999999999999999998743211 11111111222222111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
..+..+.+++.+||+.+|++|||+.++.+.|
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 1245688999999999999999995555544
No 317
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.1e-35 Score=292.80 Aligned_cols=249 Identities=28% Similarity=0.444 Sum_probs=203.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|++|.||+|... +++.+++|++..... ...+.+.+|++.++.++|||++++++++..+...++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 3778899999999999999775 689999999876432 346788999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred cCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 999999999997753 4589999999999999999999998 99999999999999999999999999998765443
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
. .....++..|+|||++.+..++.++||||||+++|+|++|+.||......+... .......+.... ...
T Consensus 153 ~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~----~~~ 222 (253)
T cd05122 153 A-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF-----KIATNGPPGLRN----PEK 222 (253)
T ss_pred c-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhcCCCCcCc----ccc
Confidence 2 344567889999999988889999999999999999999999987432111100 000000111111 111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2456899999999999999999999975
No 318
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.4e-35 Score=299.47 Aligned_cols=252 Identities=23% Similarity=0.368 Sum_probs=193.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHH-HhccCCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKA-LTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||.||+|... +|+.||+|++......+ ....+..|+.. ++..+||||+++++++..++..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 36888999999999999999775 69999999987543222 23445556664 5666899999999999999999999
Q ss_pred EecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||++ |+|.+++... .....+++..++.++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 99997 5888887653 22356899999999999999999999853 89999999999999999999999999998653
Q ss_pred CCCCCceeccccccccccccccc----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC-CC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR-LP 633 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 633 (673)
... ......++..|+|||.+.+ ..++.++|+||+|+++|||++|+.||...... ........... ..
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~ 227 (283)
T cd06617 156 DSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-------FQQLKQVVEEPSPQ 227 (283)
T ss_pred ccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-------HHHHHHHHhcCCCC
Confidence 221 1233467889999998764 44688999999999999999999998632110 00111111111 11
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+. ...+.++.+++.+||..+|++||++.++++
T Consensus 228 ~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 228 LPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCc---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 123456899999999999999999999985
No 319
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1e-35 Score=302.50 Aligned_cols=263 Identities=19% Similarity=0.248 Sum_probs=197.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCe----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRH---- 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~---- 475 (673)
++|++.+.||+|+||.||+|... +|+.||+|.+...... ......+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 36888999999999999999765 6899999987654222 223456888999999995 6999999999977655
Q ss_pred -eeEEEecccCCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecc
Q 005864 476 -SFLVYECLERGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDF 551 (673)
Q Consensus 476 -~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Df 551 (673)
.++||||+++ +|.+++..... ...+++..+..++.||+.||.|||+. +++||||+|+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999986 89888865432 24689999999999999999999999 9999999999999998 889999999
Q ss_pred cceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS 623 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~ 623 (673)
|++..............+++.|+|||++.+ ..++.++||||||+++|||++|..||............ ....
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999866443333334456888999998865 45789999999999999999999998643222110000 0000
Q ss_pred ccccc-------CCCCC--CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEIL-------DPRLP--LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~-------~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.... .+... .........+.++.+++.+||++||.+||+++|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000 00000 000011123456889999999999999999999975
No 320
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-35 Score=300.48 Aligned_cols=244 Identities=25% Similarity=0.371 Sum_probs=196.9
Q ss_pred cceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 407 EQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
...||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.+++.++|+|++++++++..++..++||||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 35799999999999976 478999999875432 23456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++...........
T Consensus 102 ~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 102 GALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 9999987643 378899999999999999999999 999999999999999999999999999876644333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...++..|+|||++.+..++.++|+||+|+++|||++|..||......+.. ............. ....+..
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~ 245 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-----KMIRDNLPPKLKN----LHKVSPS 245 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHhhCCcccCC----cccCCHH
Confidence 456889999999998888899999999999999999999998643221110 0011111111111 1123445
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+++.+||..+|.+||++.++++
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc
Confidence 889999999999999999999986
No 321
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.3e-35 Score=301.39 Aligned_cols=248 Identities=26% Similarity=0.390 Sum_probs=197.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||.||+|... +|..||+|.+.............+..|++++++++|||++++++++..++..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3677889999999999999764 689999999865433333445678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++ ++.+.+.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 106 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 9975 8888776543 4588999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 562 SNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
....+++.|+|||++. .+.++.++|||||||++|||++|+.||....... ....+.....+.. .
T Consensus 179 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~--~ 245 (317)
T cd06635 179 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNESPTL--Q 245 (317)
T ss_pred ---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHhccCCCC--C
Confidence 2345788999999974 4568899999999999999999999986322111 0111111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
....+..+.+++.+||+.+|.+||++.++++.
T Consensus 246 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 246 SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred CccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 11234468899999999999999999999874
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.5e-35 Score=303.19 Aligned_cols=262 Identities=26% Similarity=0.305 Sum_probs=197.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Ceee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 477 (673)
.++|++.+.||+|+||.||+|... +|+.||+|.++...... .....+.+|+.++++++|+|++++++++... +..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 357899999999999999999764 69999999986542221 1233466799999999999999999998754 5689
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++ +|.+++.... ..+++.++..++.|+++|++|||+. +++||||+|+||+++.++.+||+|||++...
T Consensus 85 lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 99999975 8988887643 4589999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cccccccc-
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLSLNEIL- 628 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~~~~~~- 628 (673)
...........++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+...... ...+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 544333334456788999998865 457899999999999999999999986433221100000 00000000
Q ss_pred ---CCCCCC---CCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 ---DPRLPL---PSRN----IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ---~~~~~~---~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...... +... ....+.++.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 0000 1112456789999999999999999999985
No 323
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1e-35 Score=305.77 Aligned_cols=263 Identities=20% Similarity=0.296 Sum_probs=196.5
Q ss_pred CCCccceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Ceee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSF 477 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 477 (673)
+|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|+.++..++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999764 4789999998764322223346678899999999999999999999887 7899
Q ss_pred EEEecccCCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC----CCceEEecc
Q 005864 478 LVYECLERGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS----EYEARVSDF 551 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~----~~~~kl~Df 551 (673)
+||||+++ ++.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 77777754321 23588899999999999999999999 9999999999999999 899999999
Q ss_pred cceeecCCCCC---CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-ccccc---
Q 005864 552 GIAKFLKPGSS---NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-NMNLS--- 623 (673)
Q Consensus 552 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~--- 623 (673)
|++........ ......++..|+|||.+.+. .++.++||||||+++|||++|+.||........... .....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 12334678899999987664 578999999999999999999999864322110000 00000
Q ss_pred ---------------------cccc--cCCCCCCCCcchH-------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 ---------------------LNEI--LDPRLPLPSRNIQ-------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ---------------------~~~~--~~~~~~~~~~~~~-------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.... .......+..... .....+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0000011100000 22346889999999999999999999975
No 324
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.2e-35 Score=291.30 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=205.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 479 (673)
+|...+.||+|++|.||+|... +++.|++|.+...... ....+.+.+|++.+++++||||+++++.+... +..++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4677899999999999999776 7999999998765332 34567899999999999999999999999888 889999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999998653 689999999999999999999998 999999999999999999999999999987755
Q ss_pred CCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 560 GSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 560 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
... ......++..|+|||...+...+.++||||||+++|+|++|..||...... ............. ..
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~--~~ 224 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-------MAALYKIGSSGEP--PE 224 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHhccccCCC--cC
Confidence 432 134456888999999998888999999999999999999999998744310 0011111110000 01
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+.+++.+|++.+|++||++.|+++
T Consensus 225 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11122456999999999999999999999986
No 325
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.6e-35 Score=300.69 Aligned_cols=262 Identities=20% Similarity=0.278 Sum_probs=196.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|++|+||+|... +|+.||+|.+...... ....+.+.+|++++++++||||+++++++..+...++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 46888999999999999999765 6899999988654221 223467888999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~ 559 (673)
||+++ +|.+++..... ..+++..+..++.||+.||+|||+. +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 81 e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 81 EYLDL-DLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ecccc-cHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 99964 88888865432 3467888889999999999999999 9999999999999985 56799999999976544
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc------
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN------ 625 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~------ 625 (673)
.........+++.|+|||++.+ ..++.++||||+|+++|+|+||+.||......+..... ....+.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 3333334467889999998865 45788999999999999999999998643221110000 000000
Q ss_pred cc--cCCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EI--LDPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~--~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. ..+...... ......+.++.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000000000 001122345889999999999999999999985
No 326
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=325.12 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=205.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC----C----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP----S----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFC 470 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 470 (673)
..++..+.+.+|+|.||.|++|... . ...||||.++..... .+.+.+..|+++|+.+ +||||+.++|+|
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 3344566679999999999999542 1 457999998876433 5688999999999999 699999999999
Q ss_pred ecCCeeeEEEecccCCChHHHHhcCC-------C----C--ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 005864 471 SHPRHSFLVYECLERGSLAEILSNDG-------S----I--KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKN 537 (673)
Q Consensus 471 ~~~~~~~lv~e~~~~gsL~~~l~~~~-------~----~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 537 (673)
.+.+..++|.||++.|+|.++++..+ . . ..++......++.|||.||+||++. +++||||.++|
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRN 448 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARN 448 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhhh
Confidence 99999999999999999999998765 0 0 2388899999999999999999999 99999999999
Q ss_pred eEeCCCCceEEecccceeecCCCCCCc-eecc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccc
Q 005864 538 VLLSSEYEARVSDFGIAKFLKPGSSNW-TEFA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLL 613 (673)
Q Consensus 538 ill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~ 613 (673)
|+++++..+||+|||+|+......... .... -+..|||||.+....|+.|+||||||+++|||++ |..||......
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 999999999999999999654433222 2122 2457999999999999999999999999999998 88998742211
Q ss_pred cccccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 614 SSSSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 614 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....-+.++ ++..|.. +..+++++++.||+.+|++||++.|+++.++
T Consensus 529 -------~~l~~~l~~G~r~~~P~~----c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 529 -------EELLEFLKEGNRMEQPEH----CSDEIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred -------HHHHHHHhcCCCCCCCCC----CCHHHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 1111111122 2233322 2446889999999999999999999999875
No 327
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.7e-35 Score=291.44 Aligned_cols=249 Identities=25% Similarity=0.446 Sum_probs=204.9
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|++|.||+|... +++.|++|.+...... ....+.+.+|++++.+++|||++++++++..++..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 4778899999999999999765 6889999998765332 2346789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 80 YAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred cCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999999765 3589999999999999999999999 99999999999999999999999999998876554
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......++..|+|||...+..++.++||||+|+++|+|++|+.||.......... ... .......+ ..
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~-----~~~--~~~~~~~~----~~ 222 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALF-----RIV--QDDHPPLP----EG 222 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHH-----HHh--ccCCCCCC----CC
Confidence 43344568889999999988888999999999999999999999986432211100 000 01111111 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||..+|++|||+.+++.
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 2346889999999999999999999975
No 328
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.5e-35 Score=300.11 Aligned_cols=253 Identities=24% Similarity=0.325 Sum_probs=193.9
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 480 (673)
+|+..+.||+|+||.||++... +|+.||+|.+...... .....+.+|+.++.++. ||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 4556678999999999999764 6899999998654322 34667889999999996 999999999999999999999
Q ss_pred ecccCCChHHHHh---cCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 481 ECLERGSLAEILS---NDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 481 e~~~~gsL~~~l~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
||+.. ++.++.. ... ...+++..+..++.|++.||+|||+.. +++||||||+||+++.++.++|+|||++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 99875 6555432 211 245889999999999999999999742 8999999999999999999999999999765
Q ss_pred CCCCCCceecccccccccccccccC---CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC-C
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL-P 633 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 633 (673)
..... .....++..|+|||++.+. .++.++||||+|+++|||++|+.||..... ......+...... .
T Consensus 159 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~ 230 (288)
T cd06616 159 VDSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-------VFDQLTQVVKGDPPI 230 (288)
T ss_pred ccCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-------HHHHHhhhcCCCCCc
Confidence 33221 2334578899999998766 688999999999999999999999864321 0011111111111 1
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+.++.+++.+||+.+|++|||++++++
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111234567999999999999999999999986
No 329
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.6e-35 Score=297.14 Aligned_cols=250 Identities=24% Similarity=0.372 Sum_probs=204.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 479 (673)
++|.+.+.||+|+||.||+|... +|+.||+|.+...........+.+..|++++.+++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888999999999999999765 79999999987644333444677889999999998 99999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++...+ .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998753 589999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC--------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc
Q 005864 560 GSS--------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619 (673)
Q Consensus 560 ~~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 619 (673)
... ......++..|+|||...+..++.++||||+|++++++++|+.||.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----- 229 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----- 229 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-----
Confidence 221 1123457889999999988889999999999999999999999987433111
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTM----QTVCQ 669 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~v~~ 669 (673)
............+. ..+..+.+++.+||+.+|++||++ +|+++
T Consensus 230 ---~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 ---TFQKILKLEYSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHhcCCCCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11112222222222 224458899999999999999999 77764
No 330
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=7e-35 Score=290.13 Aligned_cols=252 Identities=26% Similarity=0.384 Sum_probs=205.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||.|+||.||++... +++.|++|++..... .....+.+.+|+++++.++|||++++.+.+..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 4778899999999999999765 689999999865432 23446778899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++.... ....+++..+..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999997642 125689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||...+..++.++||||+|+++++|++|+.||+.....+ ...............
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~--- 225 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE--------LALKILKGQYPPIPS--- 225 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH--------HHHHHhcCCCCCCCC---
Confidence 333344568889999999988889999999999999999999999987432211 111111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||..+|++|||+.++++
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22345889999999999999999999986
No 331
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.2e-36 Score=280.28 Aligned_cols=204 Identities=20% Similarity=0.334 Sum_probs=171.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC---C--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP---S--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 474 (673)
...|+....||+|.||.||+|.-+ + .+.+|+|+++...... .......+|+.+++.++|||++.+..++.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 356889999999999999999432 2 2369999997653321 223456789999999999999999999876 78
Q ss_pred eeeEEEecccCCChHHHHhcCC--CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC----CceEE
Q 005864 475 HSFLVYECLERGSLAEILSNDG--SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE----YEARV 548 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl 548 (673)
..++++||.+. +|.++++.++ ....++-..+.+|+.||+.|+.|||++ .|+||||||.||++..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 89999999998 9999997543 235688889999999999999999999 89999999999999888 89999
Q ss_pred ecccceeecCCCCCC---ceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 549 SDFGIAKFLKPGSSN---WTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
+|||+++.+...-.. ...++.|++|+|||.+.+. .||++.||||.|||+.||+|-++-|.+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999988654332 2456789999999998865 489999999999999999998887754
No 332
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.2e-35 Score=296.38 Aligned_cols=259 Identities=20% Similarity=0.240 Sum_probs=185.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHH--------HHHHHHHHHHHhccCCCcccceeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISV--------QREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
++|.+.+.||+|+||+||+|...+ +..+|+|............ ......+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999997654 4456666533221110000 1122334455667789999999998
Q ss_pred eecCC----eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc
Q 005864 470 CSHPR----HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545 (673)
Q Consensus 470 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 545 (673)
+.... ..++++|++.. ++.+.+.... ..++..+..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 75443 34678887654 6766665432 356778889999999999999999 9999999999999999999
Q ss_pred eEEecccceeecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 546 ARVSDFGIAKFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
++|+|||+++....... ......||+.|+|||+..+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221 11234689999999999999999999999999999999999999975422111000
Q ss_pred cc-ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 619 NM-NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 619 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.. ......+..+....+ ..+..+.+++..|+..+|++||+++++.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKIK-----NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHHhhhhhhccC-----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 00 001111122222211 22356889999999999999999999999874
No 333
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.8e-35 Score=291.79 Aligned_cols=250 Identities=23% Similarity=0.283 Sum_probs=204.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|+||.||++... +++.+|+|.+...... ......+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 4778899999999999999654 6889999998754332 2345678889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCC-CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++..... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+|++|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 9999999999876321 24578999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......++..|+|||...+..++.++|+||+|+++|||++|+.||......+ ....+.....+.. ..
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~---~~ 223 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--------LRYKVQRGKYPPI---PP 223 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCCCCC---ch
Confidence 2223457889999999999889999999999999999999999987432211 1111111222211 12
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+|++.+|++||++.|+++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 34566999999999999999999999986
No 334
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.1e-35 Score=290.73 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=194.1
Q ss_pred HHHHHHHhcCCCcccee--ccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 394 YEEIIRATKNFDAEQCI--GIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~i--g~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
..+.....+.|++.+.+ |+|+||.||++.. .+++.+|+|.+....... .|+.....+ +|||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEE
Confidence 44555566778887777 9999999999976 468899999876432111 122222222 79999999999
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEE
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARV 548 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl 548 (673)
+..++..++||||+++|+|.+++.... .+++.++..++.|+++|+.|||+. +++||||+|+||+++.++ .++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEE
Confidence 999999999999999999999998653 589999999999999999999999 999999999999999988 9999
Q ss_pred ecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 549 SDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
+|||++...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||........ ....+....
T Consensus 152 ~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~ 223 (267)
T PHA03390 152 CDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL----DLESLLKRQ 223 (267)
T ss_pred ecCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh----hHHHHHHhh
Confidence 999999865432 234578899999999988999999999999999999999999873221100 000111111
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 005864 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPT-MQTVCQ 669 (673)
Q Consensus 629 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~v~~ 669 (673)
..... .....+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 224 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 QKKLP----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cccCC----cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11111 22244566899999999999999996 588874
No 335
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-37 Score=331.74 Aligned_cols=251 Identities=27% Similarity=0.384 Sum_probs=203.0
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+-++.....||.|.||.||.|. ..+|.-.|+|.++..... ....+...+|..++..++|||+|+++|+-.+.+..+|-
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 3456677889999999999995 457999999987654322 44567788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||++|+|.+.+...+ ..++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.|..+.+
T Consensus 1313 MEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 99999999999998654 356677777889999999999999 999999999999999999999999999998866
Q ss_pred CCCC----ceecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC-
Q 005864 560 GSSN----WTEFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR- 631 (673)
Q Consensus 560 ~~~~----~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 631 (673)
..+. .....||+.|||||++.+.. ...+.||||+|||+.||+||+.||...+.. ...+-.+-.+.
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh~ 1459 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGHK 1459 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccCC
Confidence 5422 23567999999999997544 566899999999999999999998733210 11111111112
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.| ...+.+-.+++..|+..||++|.++.|+++
T Consensus 1460 Pq~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1460 PQIP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCCc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 2222 235667889999999999999999999876
No 336
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.8e-35 Score=303.68 Aligned_cols=259 Identities=20% Similarity=0.317 Sum_probs=197.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP----- 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 473 (673)
..++|+..+.||+|+||.||+|... +|+.||+|.+..... .......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3478999999999999999999764 799999999865322 223345677899999999999999999998643
Q ss_pred -CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
...++||||+++ +|.+.+... +++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 346999999975 888887642 78888999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN------------- 619 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~------------- 619 (673)
+++...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||...+........
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 164 LARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred cceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 998764332 223345788999999999999999999999999999999999998643211100000
Q ss_pred -cccccccccCCCC--------------CCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 -MNLSLNEILDPRL--------------PLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 -~~~~~~~~~~~~~--------------~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.........+.+. ..+. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000000000 0000 001123456889999999999999999999985
No 337
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=7.6e-35 Score=294.25 Aligned_cols=259 Identities=22% Similarity=0.306 Sum_probs=202.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++.+.||+|++|.||+|... +|+.+++|.+...... ......+.+|++++++++||||+++++++..++..++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 567789999999999999765 6899999998754332 23456788899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++ ++.+++.... ..+++.++..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 80 MDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred cCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 986 8888887643 4689999999999999999999999 999999999999999999999999999987755442
Q ss_pred CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccccccC-----
Q 005864 563 NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNEILD----- 629 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~----- 629 (673)
......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+..... ....+....+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 33345678889999998776 7899999999999999999999998643322110000 0000000000
Q ss_pred ------CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 ------PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.............+.++.+++.+||+.||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000001112234567999999999999999999999985
No 338
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=8.5e-35 Score=294.53 Aligned_cols=259 Identities=22% Similarity=0.315 Sum_probs=196.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeecCCe----
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSHPRH---- 475 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~---- 475 (673)
|++.+.||+|+||.||+|... +++.||+|+++..... ......+.+|+.++.++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 567889999999999999876 4899999998754332 22234566777777666 59999999999987766
Q ss_pred -eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 476 -SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 476 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
.+++|||+.+ +|.+++..... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999985 89998876432 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------ccc-c--
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLS-L-- 624 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~-~-- 624 (673)
........ .....++..|+|||++.+..++.++||||||+++|||++|+.||+.....+...... ... .
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 155 RIYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eeccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 87643322 233457889999999998899999999999999999999999987433211100000 000 0
Q ss_pred ----ccccCCCC-CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 ----NEILDPRL-PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ----~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ .............+.+++.+||+.||++||+++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 0111122234567889999999999999999999975
No 339
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.6e-35 Score=304.83 Aligned_cols=260 Identities=24% Similarity=0.368 Sum_probs=195.8
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|++.+.||+|+||.||+|.. .+|+.||+|.+... ........+.+|+.++++++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46799999999999999999965 46899999998642 2223456678899999999999999999987543 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+++ ++.+++... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred eEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 57999999975 888887643 488899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------ccccccc
Q 005864 555 KFLKPGSS---NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLS 623 (673)
Q Consensus 555 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~ 623 (673)
........ ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......... .....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 87643222 1223467889999998754 46889999999999999999999998643211100 0000000
Q ss_pred cccccCCC-------CCCC-Cc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 624 LNEILDPR-------LPLP-SR----NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 624 ~~~~~~~~-------~~~~-~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
...+.+.. .+.. .. .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11001000 0000 00 011234568899999999999999999999863
No 340
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-36 Score=306.05 Aligned_cols=261 Identities=26% Similarity=0.372 Sum_probs=201.8
Q ss_pred CCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------Cee
Q 005864 404 FDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------RHS 476 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 476 (673)
+...+.||+|+||.||+|+. .+|+.||||.+.... .....+...+|+++|++++|||||++.+.-.+. +..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 34457899999999999985 579999999987643 334567788999999999999999999986543 356
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC--CCCc--eEEeccc
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS--SEYE--ARVSDFG 552 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~--~kl~Dfg 552 (673)
.+|||||.+|||+..+.+......+++.+.+.++.+++.||.|||++ +|+||||||.||++- ++|+ -||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 89999999999999999887778899999999999999999999999 999999999999984 3343 6999999
Q ss_pred ceeecCCCCCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-----------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM----------- 620 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~----------- 620 (673)
.|+-.+.+. .....+||..|.+||... .+.|+..+|.|||||++|+.+||..||.............
T Consensus 170 ~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v 248 (732)
T KOG4250|consen 170 AARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV 248 (732)
T ss_pred ccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence 999876544 667789999999999998 4889999999999999999999999997443322111110
Q ss_pred ------ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHH
Q 005864 621 ------NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP--TMQTVCQL 670 (673)
Q Consensus 621 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp--s~~~v~~~ 670 (673)
.+...-.....++.+....+.....+...+..++.-+|.+|- .+.++.+.
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~ 306 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAE 306 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHH
Confidence 000001111223333333344445566677778888888887 55444433
No 341
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-36 Score=272.19 Aligned_cols=249 Identities=20% Similarity=0.327 Sum_probs=197.1
Q ss_pred CccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEec
Q 005864 405 DAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+...-+|.|..|.||+++.. +|..+|||.+... ...++.+++...+.++..- ++|+||+.+|||..+...++.||.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 34566999999999999775 5999999999765 3444567788888887776 599999999999999999999998
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
|.. ....+++... .++++.-.-++...+..||.||.++. +|+|||+||+||++|+.|++|+||||.+.++-...
T Consensus 173 Ms~-C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk- 246 (391)
T KOG0983|consen 173 MST-CAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK- 246 (391)
T ss_pred HHH-HHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc-
Confidence 865 6666666543 45788888889999999999999884 99999999999999999999999999998775432
Q ss_pred Cceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 563 NWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
..+..+|-+.|||||.+.- ..|+-.+||||||+.++|+.||+.||..... ..+.+..+++...+.. ...
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t-------dFe~ltkvln~ePP~L-~~~ 318 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT-------DFEVLTKVLNEEPPLL-PGH 318 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc-------cHHHHHHHHhcCCCCC-Ccc
Confidence 2345677889999999863 3588899999999999999999999875322 1222333343222211 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++..||.+|+.+||...++++
T Consensus 319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 319 MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 225567999999999999999999999875
No 342
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.5e-35 Score=295.93 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=198.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeEEE
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFLVY 480 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 480 (673)
|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|+++++.++|||++++++++... +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 567889999999999999776 58999999997653 2233456788999999999999999999999887 8899999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 80 EYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 99985 8998887653 4689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccccccc-----
Q 005864 561 SS-NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLSLNE----- 626 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~----- 626 (673)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+.......... .....+..
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 32 2233456788999997764 4578999999999999999999999864332110000 00000000
Q ss_pred ---ccCCCCCCCC---cchHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ---ILDPRLPLPS---RNIQD-KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ---~~~~~~~~~~---~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+. ..... .+.++.+++.+||..+|.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000 00011 1557899999999999999999999986
No 343
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.5e-35 Score=296.47 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|++.+.||+|+||.||+|.+.+ ++.||||.++.... .....++..|+.++.+. +||||+++++++.++...++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 3568889999999999999998864 89999999875422 22345666777777777 49999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++ ++.++..... ..+++..+..++.|++.|++|||+.. +++||||+|+||++++++.+||+|||++....
T Consensus 92 v~e~~~~-~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 92 CMELMST-CLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EeeccCc-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 9999864 7777776533 36889999999999999999999731 89999999999999999999999999987654
Q ss_pred CCCCCceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... ......++....+.
T Consensus 167 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~ 238 (296)
T cd06618 167 DSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEEPPS 238 (296)
T ss_pred CCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCCCCC
Confidence 3222 22345778999999987553 788999999999999999999998642110 01111111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.. .....+.++.+++.+||+.||++||++.++++.
T Consensus 239 ~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 LP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 011234568999999999999999999999753
No 344
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.6e-35 Score=304.02 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=197.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC--Ce
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP--RH 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~ 475 (673)
..++|++.+.||+|+||.||+|... +|+.||+|++..... .......+.+|+.++.++ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 3467888999999999999999765 688999998864322 222345677899999999 999999999998653 46
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++||||+++ +|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~~-~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 84 IYLVFEYMET-DLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEEeccccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 7999999985 999988753 478889999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-----Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc-
Q 005864 556 FLKPGSS-----NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN- 621 (673)
Q Consensus 556 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~- 621 (673)
....... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6643321 2233567889999998764 45788999999999999999999998643221110000 00
Q ss_pred -------ccccccc----CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 622 -------LSLNEIL----DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 622 -------~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
......+ ..............+.++.+++.+||+.||++|||+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000001 011110011111234568999999999999999999999863
No 345
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.2e-35 Score=293.84 Aligned_cols=256 Identities=21% Similarity=0.270 Sum_probs=192.9
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecC--CeeeEE
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP--RHSFLV 479 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 479 (673)
|++.+.||+|+||.||+|... +++.||+|+++...... ......+|+..+.++. |||++++++++.++ +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 567889999999999999764 68999999987543221 2234457888999885 99999999999887 889999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++ ++.+++.... ..+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||++.....
T Consensus 79 ~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 79 FELMDM-NLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EecCCc-cHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 999975 8888887643 4589999999999999999999999 9999999999999999 9999999999987643
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc------cccccccccC---
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN------MNLSLNEILD--- 629 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~------~~~~~~~~~~--- 629 (673)
... .....++..|+|||++.. ..++.++||||+||++|||++|..||......+..... ....+.+...
T Consensus 152 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 152 KPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred CCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 322 233457889999997654 55788999999999999999999999643321100000 0000000000
Q ss_pred -CCCCCCCc-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 -PRLPLPSR-------NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 -~~~~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+.. .....+.++.+++.+||+++|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00000000 01234567999999999999999999999986
No 346
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.5e-35 Score=297.47 Aligned_cols=249 Identities=27% Similarity=0.401 Sum_probs=196.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||+|+||.||+|... +++.||+|.+...........+++.+|+++++.++|+|++++++++..++..++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34667788999999999999765 58889999886433333334567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9997 58888776543 3578899999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
....+++.|+|||++. ...++.++|||||||++|||++|+.||........ .........+. .
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~~--~ 234 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--------LYHIAQNESPA--L 234 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH--------HHHHhhcCCCC--c
Confidence 2345788999999874 34678899999999999999999999763221110 00011111111 0
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....+..+.+++.+||+.+|++||++.++++.
T Consensus 235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred CcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 112334568899999999999999999999863
No 347
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-36 Score=275.48 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=208.6
Q ss_pred cCCCcc-ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec----CC
Q 005864 402 KNFDAE-QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH----PR 474 (673)
Q Consensus 402 ~~~~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~ 474 (673)
++|.+. ++||-|-.|.|.....+ +|+++|+|++... ....+|++..-.. .|||||.++++|.. ..
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 445443 56999999999988554 7999999987532 3455788876666 69999999999854 34
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 551 (673)
..++|||.|+||.|.+.++.++. ..+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+. |..+|++||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 67899999999999999998764 5699999999999999999999999 9999999999999964 456999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|+|+.-.. ........-|+.|.|||++...+|+...|+||+||++|-|+.|.+||...... .........+..+.
T Consensus 209 GFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~----aispgMk~rI~~gq 283 (400)
T KOG0604|consen 209 GFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKRRIRTGQ 283 (400)
T ss_pred ccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc----cCChhHHhHhhccC
Confidence 99986432 23345677899999999999999999999999999999999999999754332 11223344566777
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+|...|...+....++|+.+|..+|++|-|+.|++.
T Consensus 284 y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 284 YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 88888999999999999999999999999999999875
No 348
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-34 Score=297.35 Aligned_cols=258 Identities=19% Similarity=0.254 Sum_probs=192.8
Q ss_pred ccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 406 AEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.+.+|.|+++.||++.. +|+.||+|++..... .....+.+.+|++++++++||||+++++++..++..+++|||+++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 344455666666666655 799999999875422 233567899999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC---
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS--- 562 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 562 (673)
|+|.+++..... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||.+........
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 84 GSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999999986532 3478888999999999999999999 999999999999999999999999999876532221
Q ss_pred ----Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccc-------------
Q 005864 563 ----NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS------------- 623 (673)
Q Consensus 563 ----~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~------------- 623 (673)
......++..|+|||++.. ..++.++|||||||++|||++|+.||................
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 1123446778999999865 357889999999999999999999997432211000000000
Q ss_pred ---ccc----ccCCC--CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 ---LNE----ILDPR--LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ---~~~----~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... ..++. .............++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 00000 00111122334457889999999999999999999986
No 349
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.5e-35 Score=292.52 Aligned_cols=244 Identities=22% Similarity=0.226 Sum_probs=187.3
Q ss_pred eeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHH---HHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 409 CIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEI---KALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
.||+|+||.||+|... +|+.||+|.+.............+..|. ..++...||+|+++++++..++..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999764 6899999988654322222122233343 34445579999999999999999999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
+|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++....... .
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~ 152 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--P 152 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--C
Confidence 99999998754 3589999999999999999999999 99999999999999999999999999987553221 2
Q ss_pred eecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||........ ..............+. ..+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~s 223 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HEIDRMTLTMAVELPD----SFS 223 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-----HHHHHHhhccCCCCCC----cCC
Confidence 234688999999998754 588999999999999999999999874321110 0000011111111111 224
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 644 ISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.++.+++.+|+..+|.+|| ++.++++
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 5688999999999999999 9999875
No 350
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8e-35 Score=295.00 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=197.0
Q ss_pred CCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999975 36899999998754322 223356788899999999 599999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 9999999999999999765 3477888999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CceecccccccccccccccC--CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
...... ......++..|+|||.+.+. .++.++||||||+++|+|++|+.||....... ..............+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~----~~~~~~~~~~~~~~~ 230 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN----SQAEISRRILKSEPP 230 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc----cHHHHHHHhhccCCC
Confidence 643322 22345688899999998753 46789999999999999999999986321110 001111111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+ ......+.+++.+||+.||++|| ++++++.
T Consensus 231 ~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 231 YP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11 12344688999999999999997 6677654
No 351
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.7e-34 Score=295.50 Aligned_cols=246 Identities=26% Similarity=0.392 Sum_probs=194.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|...+.||+|+||+||+|... +|+.|++|++...........+.+.+|+++++.++|||++++++++.+++..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999764 6889999998754433444456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 58888876543 4588999999999999999999999 999999999999999999999999999864322
Q ss_pred Cceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 563 NWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.....++..|+|||++. ...++.++||||||+++|||++|..||......... ........+. ...
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~--------~~~~~~~~~~--~~~ 242 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--------YHIAQNDSPT--LQS 242 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH--------HHHHhcCCCC--CCc
Confidence 23356788999999974 456888999999999999999999998643221110 0000001110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++.+||+.+|.+||++.++++
T Consensus 243 ~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 243 NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 122345889999999999999999999985
No 352
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.4e-34 Score=288.95 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=197.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccch--hhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Cee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLL--LSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 476 (673)
.+|++.+.||+|+||.||+|... +|+.||+|.+.... .........+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999764 69999999875321 12233457889999999999999999999998654 467
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++++|.+++...+ .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999997643 377888999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC---CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... .......++..|+|||.+.+..++.++|+||||+++||+++|+.||........ ..+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~ 227 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA--------IFKIATQPTK 227 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH--------HHHHHcCCCC
Confidence 53211 112335678899999999888899999999999999999999999874322111 1111111100
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+.+++.+||. +|.+||++.+++.
T Consensus 228 --~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 --PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred --CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11122344568899999999 5799999998875
No 353
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.3e-35 Score=316.11 Aligned_cols=266 Identities=16% Similarity=0.191 Sum_probs=186.6
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCC--CCEEEEEe--------------eccchhhhhHHHHHHHHHHHHHhccCCCcc
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPS--GEVVAVKK--------------FHSLLLSEISVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~--------------~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 463 (673)
..++|++.+.||+|+||+||++..+. +..+++|. +.+...........+.+|+.++.+++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34689999999999999999986532 22222221 111111122235668899999999999999
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 541 (673)
|++++++..++..++|+|++.+ ++.+++..... ........+..++.|++.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999865 77777754321 12234566778999999999999999 999999999999999
Q ss_pred CCCceEEecccceeecCCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC-Cccccccc--ccc
Q 005864 542 SEYEARVSDFGIAKFLKPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISLLS--SSS 617 (673)
Q Consensus 542 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p-~~~~~~~~--~~~ 617 (673)
.++.+||+|||+++.+...... .....|+..|+|||++.+..++.++|||||||++|||++|..+ +....... ...
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 9999999999999876543322 2345789999999999999999999999999999999998754 32111000 000
Q ss_pred c------cccc-------ccccccCC-CCCCCCcchH------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 618 S------NMNL-------SLNEILDP-RLPLPSRNIQ------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 618 ~------~~~~-------~~~~~~~~-~~~~~~~~~~------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .... ...+.++. .+........ ..+..+.+++.+|++.||++|||+.|+++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 0000 00000000 0000000000 11234677899999999999999999986
No 354
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.8e-34 Score=285.87 Aligned_cols=241 Identities=27% Similarity=0.324 Sum_probs=199.5
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||.||++... +++.||+|.+.............+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999765 5899999998776544444567899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++.... .+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.++++|||++..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99998653 478899999999999999999998 999999999999999999999999999987654433344566
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
++..|+|||...+...+.++|+||||+++||+++|+.||..... ......+.....+.+... +..+.+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~l~~ 222 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILKDPLRFPEFL----SPEARD 222 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhcCCCCCCCCC----CHHHHH
Confidence 78899999999888889999999999999999999999864321 111122222233333222 345889
Q ss_pred HHHHcccCCCCCCCCH---HHHH
Q 005864 649 VALLCLEESPESRPTM---QTVC 668 (673)
Q Consensus 649 li~~cl~~dp~~Rps~---~~v~ 668 (673)
++.+||..||++||++ +++.
T Consensus 223 ~i~~~l~~~p~~R~~~~~~~~l~ 245 (250)
T cd05123 223 LISGLLQKDPTKRLGSGGAEEIK 245 (250)
T ss_pred HHHHHhcCCHhhCCCcccHHHHH
Confidence 9999999999999999 5554
No 355
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.9e-34 Score=297.31 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=192.1
Q ss_pred ceeccC--CcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIG--GQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G--~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
..||+| +||+||+|.+. +|+.||+|.+....... ...+.+.+|+.+++.++||||+++++++..++..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 99999999764 79999999986543222 345788999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
+|++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999999986542 3478899999999999999999999 99999999999999999999999998654332211111
Q ss_pred -------eecccccccccccccccC--CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccc-------------
Q 005864 565 -------TEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL------------- 622 (673)
Q Consensus 565 -------~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------------- 622 (673)
....++..|+|||++.+. .++.++||||+||++|||++|+.||......+........
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 112345679999998763 4788999999999999999999998643211100000000
Q ss_pred c----------c-----c---------cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 S----------L-----N---------EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ~----------~-----~---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. . . ........ ..........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR--TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhccchhhhhcccccchhcccccccccccccc--chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 0 0 00000111 1112345567999999999999999999999985
No 356
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.7e-35 Score=302.24 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=198.3
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|.+.+.||+|+||+||+|.. .+|+.||||.+...... ......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN-RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 35789999999999999999966 46899999998754222 22345677899999999999999999988644 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 4799999996 6899988765 3588899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------ccccc----
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNL---- 622 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~---- 622 (673)
..............++..|+|||.+.. ..++.++|||||||++|+|++|+.||.......... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 876543333344567889999998764 468899999999999999999999986432210000 00000
Q ss_pred ----ccccccC--CCCCCC--CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 623 ----SLNEILD--PRLPLP--SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 623 ----~~~~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....+. +..+.. .......+.++.+++.+||+.+|++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000 000000 00112344568899999999999999999999863
No 357
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.9e-35 Score=295.17 Aligned_cols=256 Identities=23% Similarity=0.300 Sum_probs=199.9
Q ss_pred CCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|++|.||+|.. .+++.||||.++..... .....+.+..|++++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 377889999999999999964 35788999998754322 223456788999999999 599999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +++||||+|+||+++.++.++++|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999998754 3478889999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCC-ceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSSN-WTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... .....++..|+|||...+.. .+.++||||||+++|||++|..||........ .............+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~ 230 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS----QSEISRRILKSKPP 230 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch----HHHHHHHHHccCCC
Confidence 5433222 22345788999999987655 78899999999999999999999853211100 00111111111222
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. .....+.+++.+||+.||++|||+.++.+.|+
T Consensus 231 ~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 231 FPK----TMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 221 22345889999999999999999988877664
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=8e-35 Score=300.78 Aligned_cols=259 Identities=22% Similarity=0.333 Sum_probs=201.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----ee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 476 (673)
+|++.+.||.|++|.||+|... +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.... ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4788899999999999999775 589999999876432 2334577899999999999999999999998765 78
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++ +|.+++.... .+++..+..++.|++.||+|||+. +++||||||.||+++.++.++|+|||.+..
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEEecchhh-hHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 999999985 8999887653 688999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCC---CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cc-----
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NM----- 620 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~----- 620 (673)
..... .......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+.... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 75543 123445678899999999887 789999999999999999999999864332110000 00
Q ss_pred ---ccccccccCCCCCCCC----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 ---NLSLNEILDPRLPLPS----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ---~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+........ ......+..+.+++.+||+.+|.+||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0000000000000000 001123456889999999999999999999986
No 359
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.7e-35 Score=296.37 Aligned_cols=264 Identities=25% Similarity=0.337 Sum_probs=198.2
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC---
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR--- 474 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 474 (673)
+..++|++.+.||+|+||.||+|..+ +|+.||+|.++..... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 45578999999999999999999775 5899999998654322 223456778999999999999999999987654
Q ss_pred -------eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceE
Q 005864 475 -------HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 475 -------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 547 (673)
..++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +|+|+||+|+||++++++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999987 7777776542 4589999999999999999999999 999999999999999999999
Q ss_pred EecccceeecCCCCC-Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------cc
Q 005864 548 VSDFGIAKFLKPGSS-NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SS 618 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~ 618 (673)
|+|||.+........ ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+.. ..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 999999987654332 2233456788999998764 35788999999999999999999998743221100 00
Q ss_pred ccccccccc--------cCCCCCCC---CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEI--------LDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+ .++..... .......+..+.+++.+||+.||.+||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000 00000000 0001112456899999999999999999999975
No 360
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=8.9e-35 Score=289.77 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=198.0
Q ss_pred CCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|.+.+.||+|+||.||++.... +..+++|..+..... .......+..|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47888999999999999997643 455666665443221 122344577899999999999999999999998999999
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+||+++++|.+++.... ....+++..+..++.|++.|+.|||+. +++|+||+|+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999986532 234689999999999999999999999 9999999999999985 569999999998765
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........+++.|+|||...+..++.++|+||||+++|+|++|..||....... ..........+. .
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~ 225 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS--------VVLRIVEGPTPS---L 225 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCCCCC---C
Confidence 44443444567889999999988888999999999999999999999986322111 111111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||..+|++||++.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 2244567899999999999999999999985
No 361
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.7e-35 Score=301.46 Aligned_cols=261 Identities=23% Similarity=0.352 Sum_probs=198.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CCe
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PRH 475 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 475 (673)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 367899999999999999999764 699999999875422 22235667789999999999999999998753 346
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++|+||+. |+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 799999996 58999987643 488999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCC----ceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccc--
Q 005864 556 FLKPGSSN----WTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMN-- 621 (673)
Q Consensus 556 ~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~-- 621 (673)
........ .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 66432221 123467889999998765 458899999999999999999999996433211000 0000
Q ss_pred ------ccccccc---CCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ------LSLNEIL---DPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ------~~~~~~~---~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.. ......+ .......+.++.+++.+||+.+|.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000000 0010100 0011223567999999999999999999999886
No 362
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4e-34 Score=293.03 Aligned_cols=261 Identities=24% Similarity=0.316 Sum_probs=192.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR------ 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 474 (673)
++|++.+.||+|+||.||+|... +++.||||.+...... ......+.+|++++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 56889999999999999999764 6899999988643222 122345668999999999999999999987654
Q ss_pred --eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 --HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++||||+.+ +|.+.+.... ..+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 34999999975 8888886543 3588999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCC----CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------ccc
Q 005864 553 IAKFLKPGSS----NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNM 620 (673)
Q Consensus 553 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~ 620 (673)
++........ ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9986643221 11234567889999987654 36889999999999999999999986432110000 000
Q ss_pred ccccccc----cCCCCCCCCcch---H------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 NLSLNEI----LDPRLPLPSRNI---Q------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ~~~~~~~----~~~~~~~~~~~~---~------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....... .......+.... . .....+.+++.+||..||.+|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000000 000000000000 0 01235678999999999999999999985
No 363
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.6e-34 Score=291.75 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=200.6
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+..+.||+|++|.||+|... +++.||+|.+.... ......+.+..|+.++++++|+|++++++++...+..++|+||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 566788999999999999775 59999999987653 2233456778899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++ +|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~-~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 80 CDM-DLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cCc-CHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 985 9999998753 3588999999999999999999999 999999999999999999999999999987654433
Q ss_pred CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccc---cc--cC
Q 005864 563 NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLN---EI--LD 629 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~---~~--~~ 629 (673)
......++..|+|||.+.+. .++.++||||||+++||+++|+.||.......... ......+. .. .+
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 33344567789999998766 78999999999999999999999986432211100 00000000 00 01
Q ss_pred CCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..++... ......+..+.+++.+||..||++||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 1111000 011122456999999999999999999999985
No 364
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.7e-34 Score=297.86 Aligned_cols=266 Identities=20% Similarity=0.275 Sum_probs=198.8
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC 470 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 470 (673)
...+++....++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.++.+++||||+++++++
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 34556677789999999999999999999965 57999999998754322 22345678899999999999999999988
Q ss_pred ecC------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 471 SHP------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 471 ~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
... ...+++++++ +++|.+++... .+++..+..++.|+++|++|||+. +++||||||+||++++++
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 543 3467888876 77999888653 378899999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-----
Q 005864 545 EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS----- 618 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----- 618 (673)
.+||+|||++..... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 158 ~~kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 158 ELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred CEEEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999999999875432 2233567889999998766 4678899999999999999999999853221110000
Q ss_pred --ccccccc-----------cccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 --NMNLSLN-----------EILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 --~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....... ..+....... .......+..+.+++.+|++.||.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0000000 0000000000 0000012345889999999999999999999875
No 365
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.3e-34 Score=296.66 Aligned_cols=261 Identities=20% Similarity=0.255 Sum_probs=193.8
Q ss_pred cCCC-ccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhH-----------HHHHHHHHHHHHhccCCCcccceee
Q 005864 402 KNFD-AEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEIS-----------VQREFLNEIKALTEIRHRNIVKFYG 468 (673)
Q Consensus 402 ~~~~-~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 468 (673)
++|. +.+.||+|+||+||+|... +++.||||.+......... ....+.+|++++.+++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4454 3577999999999999765 6999999998654222100 1125778999999999999999999
Q ss_pred eeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 469 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
++..++..++||||++ |+|.+++... ..+++.....++.|++.||+|||+. +++|+||+|+||+++.++.+++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999997 5999998754 3478899999999999999999999 9999999999999999999999
Q ss_pred ecccceeecCC--------------CCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccc
Q 005864 549 SDFGIAKFLKP--------------GSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLL 613 (673)
Q Consensus 549 ~Dfg~~~~~~~--------------~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 613 (673)
+|||++..... .........++..|+|||.+.+. .++.++||||+|+++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999986641 11112233467889999998764 4688999999999999999999998643321
Q ss_pred ccccc-------cccccccccc-----CCCCCC-CC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 614 SSSSS-------NMNLSLNEIL-----DPRLPL-PS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 614 ~~~~~-------~~~~~~~~~~-----~~~~~~-~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.... .....+.... .+.... +. ......+..+.+++.+||+.+|++|||++|++.
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11000 0000000000 000000 00 001112456889999999999999999999985
No 366
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.7e-34 Score=295.47 Aligned_cols=260 Identities=23% Similarity=0.348 Sum_probs=196.5
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CCe
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PRH 475 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 475 (673)
...+++|++.+.||.|+||.||+|... +|+.||+|++...... ....+.+.+|++++.+++||||+++.+++.. ...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 345678999999999999999999654 7999999988653222 2235677889999999999999999999865 557
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++|+||+ +++|.++++.. .+++..+..++.|++.||+|||+. +++||||+|+||++++++.++++|||.+.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 88999998 45899888643 367788889999999999999999 99999999999999999999999999997
Q ss_pred ecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------ccccccccccc
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLSLNEI 627 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~~~~ 627 (673)
..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... +..........
T Consensus 157 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 157 IQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred ccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 54322 223456888999998765 56899999999999999999999998643221000 00000000000
Q ss_pred cCC-------CC----CCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDP-------RL----PLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~-------~~----~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+. .. +.+. ......+.++.+++.+||+.+|++|||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00 0000 001123456899999999999999999999975
No 367
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.2e-34 Score=288.80 Aligned_cols=258 Identities=24% Similarity=0.367 Sum_probs=196.0
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEe
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 481 (673)
|.+.+.||+|++|+||+|... +++.|++|++...... .......+|+..+.+++ |||++++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 567889999999999999875 5889999998654322 12334457899999998 9999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+ +|+|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 79 YM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred cC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 99 789999987654 24579999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccc------cccccc
Q 005864 562 SNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMN------LSLNEI 627 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~------~~~~~~ 627 (673)
......++..|+|||++. +..++.++|+||||++++||++|+.||......+.... ... ......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 223456788999999875 45578999999999999999999999864332111000 000 000000
Q ss_pred cCCCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++...+... .........+.+++.+||+.+|++|||++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 110111000 000111356889999999999999999999986
No 368
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=282.68 Aligned_cols=243 Identities=22% Similarity=0.298 Sum_probs=208.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
.+|....+||+|+||.|..|..+ +.+-+|||++++......+..+--..|-++|.-. +-|.+++++.+|++.+..|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 56889999999999999999654 5678999999887666555566667788888777 688999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+.||+|.-+++.-+. +.+..+..+|..||-||-+||++ ||+.||||..|||++.+|.+||+|||+++----
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999999988754 66788899999999999999999 999999999999999999999999999985434
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
+........||+.|+|||++...+|+..+|.|||||++|||+.|+.||++. ..++....+++.....|.
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe--------DE~elF~aI~ehnvsyPK--- 571 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE--------DEDELFQAIMEHNVSYPK--- 571 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHHccCcCcc---
Confidence 445566789999999999999999999999999999999999999999843 334556677777766554
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC
Q 005864 640 QDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
..+.+...+++..+.+.|.+|.
T Consensus 572 -slSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 572 -SLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -cccHHHHHHHHHHhhcCCcccc
Confidence 3445578899999999999985
No 369
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.7e-34 Score=318.17 Aligned_cols=148 Identities=28% Similarity=0.396 Sum_probs=133.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|.+. +++.||+|+++............+.+|+.++..++||||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999775 68999999987654444455678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
||+++++|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997653 478888999999999999999999 99999999999999999999999999885
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3e-34 Score=294.07 Aligned_cols=262 Identities=21% Similarity=0.277 Sum_probs=193.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----- 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 474 (673)
.++|++.+.||+|+||.||+|... +++.||+|++......+. ....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 467999999999999999999765 689999998865432221 2345678999999999999999999875433
Q ss_pred ---eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 475 ---HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 475 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
..++|+||+++ ++.+.+.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++++||
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46899999976 7777776543 4589999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCC-----------ceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-
Q 005864 552 GIAKFLKPGSSN-----------WTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS- 618 (673)
Q Consensus 552 g~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~- 618 (673)
|++......... .....+++.|+|||.+.+. .++.++||||||+++|||++|+.||...........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999865432211 1223567889999987654 578999999999999999999999864332110000
Q ss_pred ------ccccc------ccc----ccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 ------NMNLS------LNE----ILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ------~~~~~------~~~----~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..... ... ......+.. ..........+.+++.+|++.||++|||+.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00000 000 000001000 0001112256889999999999999999999875
No 371
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=316.02 Aligned_cols=253 Identities=22% Similarity=0.260 Sum_probs=211.2
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
-..++|++.++||+|+||.|..++++ +++.||.|++.+...-......-|..|-.+|.--+.+-|++++-.|.++++.|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence 33578999999999999999999886 58999999998765555556788999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||||+||+|..++.+.. .+++..+..++..|.-||+-+|+. |+|||||||.|||+|..|++|++|||.+-.+
T Consensus 152 lVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred EEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhc
Confidence 9999999999999998764 578888889999999999999999 9999999999999999999999999999988
Q ss_pred CCCCC-Cceecccccccccccccc----c-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC-
Q 005864 558 KPGSS-NWTEFAGTFGYVAPELAY----T-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP- 630 (673)
Q Consensus 558 ~~~~~-~~~~~~~~~~y~aPE~~~----~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 630 (673)
..+.. .....+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||.-.... +....+++.
T Consensus 226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv--------eTY~KIm~hk 297 (1317)
T KOG0612|consen 226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV--------ETYGKIMNHK 297 (1317)
T ss_pred CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH--------HHHHHHhchh
Confidence 75544 445678999999999885 2 56899999999999999999999999743332 333445544
Q ss_pred -CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHH
Q 005864 631 -RLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVC 668 (673)
Q Consensus 631 -~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~ 668 (673)
.+.+| ...+.+.+..++|.+.+. +|+.|-. +.++-
T Consensus 298 ~~l~FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 298 ESLSFP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred hhcCCC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 44444 223466778888888775 6667765 66553
No 372
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=289.51 Aligned_cols=245 Identities=23% Similarity=0.364 Sum_probs=207.9
Q ss_pred cceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 407 EQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.+++|+|.||+||-|.+ ++|+.||||++.+....... ...+.+|+.+|+.++||.||.+.-.|++++..++|||.+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 47899999999999966 47999999999876554433 47789999999999999999999999999999999999966
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEecccceeecCCCCC
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~~~~~~ 562 (673)
+..+.+-.... ..+++.....++.||+.||.|||.+ +|+|+||||+||++... -++|+||||+|+++.. ..
T Consensus 648 -DMLEMILSsEk-gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-ks 721 (888)
T KOG4236|consen 648 -DMLEMILSSEK-GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-KS 721 (888)
T ss_pred -hHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch-hh
Confidence 66666644332 5688888889999999999999999 99999999999999754 3699999999998854 34
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
.....+||+.|.|||++.++.|...-|+||.|||+|.-+.|..||... ++.-+++.+..+..|+..|.+.
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----------EdIndQIQNAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----------EDINDQIQNAAFMYPPNPWSEI 791 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----------cchhHHhhccccccCCCchhhc
Confidence 556789999999999999999999999999999999999999998621 2233344455666777788899
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
+.+..++|...|+..-.+|-|.++.+
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 99999999999999999998887654
No 373
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.9e-34 Score=295.72 Aligned_cols=256 Identities=20% Similarity=0.327 Sum_probs=192.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------ 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 473 (673)
..+|...+.||+|+||.||+|... +|+.||+|++...... ......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 368999999999999999999764 6999999998754322 22345688999999999999999999998654
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
...++|+||+.. ++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 245899999975 7776653 2478899999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-----------
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN----------- 621 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----------- 621 (673)
++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..............
T Consensus 164 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 164 ARHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CcCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 875432 2233457888999999876 4588899999999999999999999974332111000000
Q ss_pred ----cccccccCCCCCCCCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ----LSLNEILDPRLPLPSRN----IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ----~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.............+... .......+.+++.+||+.||++||+++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000000000000000 0112345889999999999999999999984
No 374
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.6e-34 Score=294.74 Aligned_cols=258 Identities=21% Similarity=0.293 Sum_probs=194.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 474 (673)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ........+.+|+.++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 456899999999999999999965 479999999986432 22233456889999999999999999999987543
Q ss_pred --eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 --HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999998 6799988864 2478999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc------ccccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------NLSLN 625 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------~~~~~ 625 (673)
++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||............. ...+.
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 164 LARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred cccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99765322 233457889999998875 457889999999999999999999987432211000000 00000
Q ss_pred cccC--------CCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILD--------PRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~--------~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+. ..++... .........+.+++.+|++.||++|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 0000000 001122345889999999999999999999984
No 375
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-36 Score=298.08 Aligned_cols=297 Identities=27% Similarity=0.257 Sum_probs=233.0
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
+|+|+.+-+..|.++++|+.+.|.+|.++ .+|.......+|+.|+|.+|.|+....++++.++.|+.|||+.|.|+.+.
T Consensus 87 nNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~ 165 (873)
T KOG4194|consen 87 NNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIP 165 (873)
T ss_pred ccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhccc
Confidence 47888888899999999999999999999 77877677778999999999999888888999999999999999999999
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
...|..-.++++|+|++|.|+.+..+.|.++.+|.+|.|++|+|+...+..|.+++.|+.|+|..|+|.-.....|.+++
T Consensus 166 ~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~ 245 (873)
T KOG4194|consen 166 KPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLP 245 (873)
T ss_pred CCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCch
Confidence 99998888999999999999999999999999999999999999977777888899999999999998744356677777
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|+.|.|..|.+......+|..+.++++|+|..|++...-..++.++++|+.|+||+|.|..+.+..+.-.++|+.|+|+
T Consensus 246 Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs 325 (873)
T KOG4194|consen 246 SLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLS 325 (873)
T ss_pred hhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecc
Confidence 77777777777775555566667777777777777765555666666667777777776666666666666666777777
Q ss_pred CCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCC
Q 005864 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298 (673)
Q Consensus 241 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~ 298 (673)
+|+|+...+..|..+..|++|+|++|++..+...+|..+.+|++|||+.|.++..+.+
T Consensus 326 ~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 326 SNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred ccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 7766665566666666666666666666666566666666666666666666655443
No 376
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=8.2e-34 Score=294.05 Aligned_cols=257 Identities=23% Similarity=0.291 Sum_probs=190.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-------
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------- 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 473 (673)
.+|.+.+.||.|+||.||+|.. .+|+.||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 5788999999999999999966 4689999998865422 3456788899999999999999999876543
Q ss_pred -------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCc
Q 005864 474 -------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYE 545 (673)
Q Consensus 474 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~ 545 (673)
...++|+||+++ +|.+++... .+++..+..++.|++.|+.|||+. +++||||||+||+++. ++.
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 82 VGSLTELNSVYIVQEYMET-DLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccccceEEEEeecccc-cHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 357899999974 898888643 478899999999999999999999 9999999999999974 567
Q ss_pred eEEecccceeecCCCCCC---ceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-
Q 005864 546 ARVSDFGIAKFLKPGSSN---WTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM- 620 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~- 620 (673)
++++|||.+......... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||......+......
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 899999999876432221 122357888999997654 567889999999999999999999996433211100000
Q ss_pred ------ccccc-------cccCCCCCCCCc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 ------NLSLN-------EILDPRLPLPSR----NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ------~~~~~-------~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..... .........+.. .......++.+++.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000 000000000000 00123356889999999999999999999974
No 377
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=7.7e-34 Score=294.39 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=195.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe---
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH--- 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 475 (673)
..++|++.+.||+|++|.||+|+.. +++.||+|++...... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3567999999999999999999775 6889999988654222 2234667789999999999999999998866554
Q ss_pred ---eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 476 ---SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 476 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
.++|+||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5699999875 3488999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSL 624 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~ 624 (673)
++...... .....++..|+|||.+.+ ..++.++||||+|+++||+++|+.||............ .....
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 164 LARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred cccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 99865332 233467888999998765 36788999999999999999999998643221110000 00000
Q ss_pred --------ccccCCCCCCC-C---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 --------NEILDPRLPLP-S---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 --------~~~~~~~~~~~-~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+....... . ......+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00000000000 0 000112457899999999999999999999875
No 378
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-34 Score=270.60 Aligned_cols=261 Identities=21% Similarity=0.305 Sum_probs=206.5
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceee
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 468 (673)
.++.....+++....+-+|.||.||+|.|. +.+.|.||.++.. ..+-....+..|.-.+..+.|||+..+.+
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 345555567788888999999999999553 3446777877544 23335677899999999999999999999
Q ss_pred eeec-CCeeeEEEecccCCChHHHHhcC-----CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 469 FCSH-PRHSFLVYECLERGSLAEILSND-----GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 469 ~~~~-~~~~~lv~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
++.+ ...++++|.++.-|+|..++... .....++..+...++.|++.|++|||.+ ++||.||.++|.++++
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 9865 46789999999999999999832 2334567778888999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
..+||++|=.+++..-+.+... ...-.+..||+||.+....|+.++|||||||++|||+| |+.||..+++.+..
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~--- 508 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME--- 508 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH---
Confidence 9999999999999775544322 11224678999999999999999999999999999998 99998755543321
Q ss_pred cccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 620 MNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 620 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.-+.|+ ++..|..+ +.++..++.-||+.+|++||+++|++.-|+
T Consensus 509 -----~ylkdGyRlaQP~NC----PDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 509 -----HYLKDGYRLAQPFNC----PDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred -----HHHhccceecCCCCC----cHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 111222 33333333 335899999999999999999999998775
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8e-34 Score=242.80 Aligned_cols=260 Identities=19% Similarity=0.292 Sum_probs=198.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|.||+||+|+.. +++.||+|++.-... ++.......+|+-+++.++|.|||++++....+....+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 4667788999999999999654 688999999876532 23345667899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||.. +|..+..... ..++...+.+.+.|+.+|+.++|++ ++.|||+||.|.+++.+|+.|++|||+++.+.-..
T Consensus 82 ~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 9987 8888877654 4578888999999999999999999 99999999999999999999999999999776555
Q ss_pred CCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHh-CCCCCccccccccc-------ccccccccccc---cC
Q 005864 562 SNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS-------SSNMNLSLNEI---LD 629 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~-------~~~~~~~~~~~---~~ 629 (673)
...+..+.|.+|++|.++.+.+ |++..|+||-|||+.|+.. |++-|.+.+..++. +...++.+..+ -|
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 5666777899999999988765 7889999999999999997 44445433222111 11111111111 11
Q ss_pred CC-CCCC--CcchHHHH----HHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PR-LPLP--SRNIQDKL----ISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~-~~~~--~~~~~~~~----~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
-+ ++.. ...+.... ..-.+++.+.+.-+|.+|-++++.++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 00 1111 11222221 22456778888889999999998875
No 380
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.8e-33 Score=289.12 Aligned_cols=258 Identities=22% Similarity=0.339 Sum_probs=191.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-C--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC----C
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-S--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP----R 474 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~ 474 (673)
+|++.+.||+|+||.||+++.. . +..||+|++..... .....+.+.+|++++.++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4778899999999999999764 3 78999998864322 222356678899999999 599999999875432 4
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++++||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 5688889886 5899998754 3588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC----Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------ccccc
Q 005864 555 KFLKPGSS----NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNL 622 (673)
Q Consensus 555 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~ 622 (673)
........ ......|+..|+|||++.+ ..++.++|+||+|+++|+|++|+.||.......... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 86643221 1223468899999998765 468899999999999999999999986432110000 00000
Q ss_pred ccccc-----------cC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 SLNEI-----------LD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ~~~~~-----------~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+ .. +..... .........+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 00 000000 000112356889999999999999999999874
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-33 Score=292.72 Aligned_cols=259 Identities=24% Similarity=0.390 Sum_probs=214.6
Q ss_pred cHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeee
Q 005864 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFC 470 (673)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 470 (673)
.++.....++.|++.+.||.|.+|.||+++. ++|+.+|+|+....... .+++..|..+++.. .|||++.++|++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3445555677899999999999999999965 46899999988654333 45677788898888 699999999998
Q ss_pred e-----cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc
Q 005864 471 S-----HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545 (673)
Q Consensus 471 ~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 545 (673)
. .++..|+|||||.+||..|+++... ...+.|..+..|+..++.|+.+||.. .++|||+|-.||+++.++.
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 5 3578899999999999999998776 56799999999999999999999999 9999999999999999999
Q ss_pred eEEecccceeecCCCCCCceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc
Q 005864 546 ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 620 (673)
||++|||.+..+..........+||+.|||||++.. ..|+..+|+||+|++..||.-|.+|+..+.+....
T Consensus 162 VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL---- 237 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL---- 237 (953)
T ss_pred EEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh----
Confidence 999999999988877777788899999999999864 34778999999999999999999998755443221
Q ss_pred ccccccccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 NLSLNEILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .-++-+.| -..+.....++.++|..|+.+|-++||++.++++
T Consensus 238 ----F--~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 238 ----F--LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ----c--cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 11111111 1234556678999999999999999999999875
No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=268.74 Aligned_cols=250 Identities=24% Similarity=0.325 Sum_probs=193.2
Q ss_pred cceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEeccc
Q 005864 407 EQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
...||.|+||+|++-.++ +|+..|||++..... ..+++++..|.++..+- +.||||+++|.+..++..|+.||.|+
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 356999999999999664 799999999987644 34577788888866555 79999999999999999999999997
Q ss_pred CCChHHHHhcC--CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 485 RGSLAEILSND--GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 485 ~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
- |+..+-+.- -....+++.-.-.|.....+||.||-+.. .|+|||+||+||+++..|.+|+||||.+..+... -
T Consensus 147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-i 222 (361)
T KOG1006|consen 147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-I 222 (361)
T ss_pred h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH-H
Confidence 5 766554321 11245777777888889999999999874 8999999999999999999999999998765322 1
Q ss_pred Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC--Ccc
Q 005864 563 NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP--SRN 638 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 638 (673)
..+.-+|-..|||||.+.. ..|+-+|||||+|+++||+.||..||..- ....+++..+..+..+.. ...
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w-------~svfeql~~Vv~gdpp~l~~~~~ 295 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW-------DSVFEQLCQVVIGDPPILLFDKE 295 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH-------HHHHHHHHHHHcCCCCeecCccc
Confidence 1233456678999998863 35899999999999999999999998621 112333334444433322 222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+....+..+|..|+-+|-..||+..++.+
T Consensus 296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 2345677999999999999999999998865
No 383
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.4e-32 Score=269.35 Aligned_cols=219 Identities=21% Similarity=0.187 Sum_probs=175.4
Q ss_pred CCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHH
Q 005864 413 GGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEI 491 (673)
Q Consensus 413 G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 491 (673)
|.+|.||+++.. +|+.||+|++.... .+..|...+....|||++++++++...+..++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999764 68999999986532 223445555566799999999999999999999999999999999
Q ss_pred HhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccc
Q 005864 492 LSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571 (673)
Q Consensus 492 l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 571 (673)
+.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+...... .....++.
T Consensus 76 l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~ 146 (237)
T cd05576 76 ISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVEN 146 (237)
T ss_pred HHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCc
Confidence 97653 488999999999999999999999 9999999999999999999999999988655432 12234567
Q ss_pred ccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHH
Q 005864 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVAL 651 (673)
Q Consensus 572 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 651 (673)
.|+|||...+..++.++||||+|+++|||++|+.|++..... .... ..+..+. ..+..+.+++.
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~--~~~~~~~----~~~~~~~~li~ 210 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTH--TTLNIPE----WVSEEARSLLQ 210 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccc--cccCCcc----cCCHHHHHHHH
Confidence 899999998888999999999999999999999886532110 0000 0111111 23345889999
Q ss_pred HcccCCCCCCCCH
Q 005864 652 LCLEESPESRPTM 664 (673)
Q Consensus 652 ~cl~~dp~~Rps~ 664 (673)
+|++.||++||++
T Consensus 211 ~~l~~dp~~R~~~ 223 (237)
T cd05576 211 QLLQFNPTERLGA 223 (237)
T ss_pred HHccCCHHHhcCC
Confidence 9999999999996
No 384
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=262.55 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=209.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|+..++||+|+|.+|..++++ +.+.||+|++++....+.+...-...|-.+..+- +||.+|-++.+|+++...+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467999999999999999999875 5888999999987777666677777888888877 79999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|.||++||+|.-++++.+ .++++.+..+...|.-||.|||+. ||+.||||..||++|..|.+|+.|+|+++---
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999999888764 488899999999999999999999 99999999999999999999999999998544
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccc-cccccCCCCCCCCc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS-LNEILDPRLPLPSR 637 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 637 (673)
.+....+.+.||+.|.|||.+.+..|...+|.|++||+++||+.|+.||+-... +....+.+.. ++-++...++.|..
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm-~n~d~ntedylfqvilekqiriprs 481 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGM-DNPDMNTEDYLFQVILEKQIRIPRS 481 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecC-CCcccchhHHHHHHHhhhcccccce
Confidence 444556778999999999999999999999999999999999999999985542 2222222222 33445555555533
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCC
Q 005864 638 NIQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
. +.....+++.-+++||++|.
T Consensus 482 l----svkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 482 L----SVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred e----ehhhHHHHHHhhcCCcHHhc
Confidence 2 23456788889999999985
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-34 Score=275.17 Aligned_cols=256 Identities=27% Similarity=0.371 Sum_probs=196.8
Q ss_pred cCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhH----HHHHHHHHHHHHhccCCCcccceeeeee-cCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEIS----VQREFLNEIKALTEIRHRNIVKFYGFCS-HPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~ 475 (673)
++|-+...||+|+|+.||+| .+...+.||||+-........+ ..+...+|..+.+.++||.||++++|+. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45667788999999999999 5567889999987654333222 2345788999999999999999999996 4567
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEeccc
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFG 552 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg 552 (673)
+|-|.|||+|.+|.-+++..+ .+++.++..|+.||+.||.||.+.. ++|+|-||||.||++..+ |.+||.|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecc
Confidence 899999999999999998874 5889999999999999999999874 599999999999999543 789999999
Q ss_pred ceeecCCCCCC-------ceecccccccccccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc
Q 005864 553 IAKFLKPGSSN-------WTEFAGTFGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 553 ~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 621 (673)
+++.++.+... .+..+||.+|++||.+.-+ .++.|+||||.|||+|+.+.|+.||.....-.+... +
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq--e 696 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ--E 696 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh--h
Confidence 99999765432 2456799999999987533 478899999999999999999999984321111000 0
Q ss_pred cccccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 622 LSLNEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 622 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
..++. ....+|+. +....+...+|.+||++--++|....|+.
T Consensus 697 ---NTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 697 ---NTILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ---hchhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 00111 11112211 12344578899999999888888777654
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-34 Score=259.51 Aligned_cols=261 Identities=25% Similarity=0.352 Sum_probs=192.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-------- 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 472 (673)
..|+....||+|.||+||+|+.+ +|++||+|++...... ........+|+.++..++|+|++.++..|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 44566678999999999999765 5888999876442211 2233456789999999999999999998843
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
....|+||++|+. +|.-++.... ..++..++.++++++..||.|+|.. .|+|||+||.|++++.++.+||+|||
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 2347999999998 8999887653 4588899999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCC----CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccc-------------
Q 005864 553 IAKFLKPG----SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS------------- 614 (673)
Q Consensus 553 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------------- 614 (673)
+++.+... ...++..+.|.+|++||.+.+ ..|+++.|||..|||+.||+||.+-+.......
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 99755322 123455677999999998875 568999999999999999999998875322110
Q ss_pred --ccccccccccccccC-CCCCC-CCcchHHH------HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 615 --SSSSNMNLSLNEILD-PRLPL-PSRNIQDK------LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 615 --~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~------~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+.+.+. +.++. ......+. ..+..+++..++..||.+|+.++|++.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 000000000111110 00100 00011111 125778999999999999999999874
No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-34 Score=280.39 Aligned_cols=243 Identities=24% Similarity=0.402 Sum_probs=205.3
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCC-EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGE-VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+++.+..+|-|+||.|=.++..+.. .+|+|++++.-.-+....+.+..|-.+|...+.|.||++|..|.++...|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34556677999999999999775433 48999988776666667788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|-|-||.++..++.++ .++..++..++..+.+|++|||++ +||.|||||+|.+++.+|.+|+.|||+|+.+..+
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999875 488888999999999999999999 9999999999999999999999999999999877
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--CCCCCCcc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLPSRN 638 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 638 (673)
...|+ ++||+.|.|||++.+...+.++|.||+|+++||+++|.+||...+++.... .++.+ .+.+|
T Consensus 574 ~KTwT-FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn--------~ILkGid~i~~P--- 641 (732)
T KOG0614|consen 574 RKTWT-FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN--------LILKGIDKIEFP--- 641 (732)
T ss_pred Cceee-ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH--------HHHhhhhhhhcc---
Confidence 66654 789999999999999999999999999999999999999998655443221 11111 11122
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCC
Q 005864 639 IQDKLISILEVALLCLEESPESRPT 663 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps 663 (673)
........+++++....+|.+|.-
T Consensus 642 -r~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 642 -RRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -cccchhHHHHHHHHHhcCcHhhhc
Confidence 233445778999999999999964
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-33 Score=284.10 Aligned_cols=239 Identities=26% Similarity=0.318 Sum_probs=193.0
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
++.|.....+|.|+|+.|-.... ++++..+||++.+.. .+..+|+.++... .||||+++.+.+.++...|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceeee
Confidence 56788888899999999988855 568999999987651 2334577666666 69999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-CCCCceEEecccceeec
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL-SSEYEARVSDFGIAKFL 557 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfg~~~~~ 557 (673)
|||.+.|+-+.+.+.... .+. .++..|+.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++..
T Consensus 394 v~e~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eehhccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 999999998888887653 233 67778999999999999999 99999999999999 58899999999999876
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.+. ....+-|..|.|||+.....|++++|+||||++||+|++|+.||..... ..+....+..+++.
T Consensus 467 ~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~-------~~ei~~~i~~~~~s---- 532 (612)
T KOG0603|consen 467 ERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA-------GIEIHTRIQMPKFS---- 532 (612)
T ss_pred chh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc-------hHHHHHhhcCCccc----
Confidence 544 2334567899999999999999999999999999999999999873221 01111111122211
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+....+|+.+||+.||.+||+|.|+..
T Consensus 533 --~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 --ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 445567889999999999999999999864
No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.98 E-value=4.6e-32 Score=294.34 Aligned_cols=259 Identities=19% Similarity=0.217 Sum_probs=168.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-C----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeee-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-S----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF----- 469 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~----- 469 (673)
..++|++.+.||+|+||.||+|.+. + +..||+|++...... +....| .+....+.+++.+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 4568999999999999999999775 4 689999987543211 111111 1111122222222211
Q ss_pred -eecCCeeeEEEecccCCChHHHHhcCCCC-----------------ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 005864 470 -CSHPRHSFLVYECLERGSLAEILSNDGSI-----------------KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHR 531 (673)
Q Consensus 470 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 531 (673)
+..+...++|+||+++++|.+++...... .......+..++.|++.||+|||+. +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 24566789999999999999998754210 0112344567999999999999999 99999
Q ss_pred cCCCCCeEeCC-CCceEEecccceeecCCCC-CCceecccccccccccccccC----------------------CcCcc
Q 005864 532 DISSKNVLLSS-EYEARVSDFGIAKFLKPGS-SNWTEFAGTFGYVAPELAYTM----------------------KVTEK 587 (673)
Q Consensus 532 dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~----------------------~~~~~ 587 (673)
||||+|||+++ ++.+||+|||+++.+.... .......+++.|+|||.+... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999986 5789999999998664332 223456789999999965322 23456
Q ss_pred hhHHHHHHHHHHHHhCCCCCccccc-----ccccccccccccccccCCCCCCC----CcchHHHHHHHHHHHHHcccCCC
Q 005864 588 CDVYSFGVLALEVIKGKHPRDFISL-----LSSSSSNMNLSLNEILDPRLPLP----SRNIQDKLISILEVALLCLEESP 658 (673)
Q Consensus 588 ~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp 658 (673)
+||||+||++|||+++..|++.... ....... ...+.....+..... .+..........+++.+|++.||
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYD-LVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCc-HHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 7999999999999998877542110 0000000 001111111111000 00000111235589999999999
Q ss_pred CCCCCHHHHHH
Q 005864 659 ESRPTMQTVCQ 669 (673)
Q Consensus 659 ~~Rps~~~v~~ 669 (673)
++|||++|+++
T Consensus 439 ~kR~ta~e~L~ 449 (566)
T PLN03225 439 RQRISAKAALA 449 (566)
T ss_pred ccCCCHHHHhC
Confidence 99999999985
No 390
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=1.1e-31 Score=264.33 Aligned_cols=239 Identities=29% Similarity=0.450 Sum_probs=192.9
Q ss_pred CcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHH
Q 005864 414 GQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL 492 (673)
Q Consensus 414 ~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 492 (673)
+||.||+|... +|+.+|+|++....... ..+.+.+|++.+++++|+|++++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK--KRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc--HHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999876 58999999987643322 1678999999999999999999999999999999999999999999999
Q ss_pred hcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecccccc
Q 005864 493 SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572 (673)
Q Consensus 493 ~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 572 (673)
..... +++..+..++.++++++.|||+. +++|+||+|+||++++++.++++|||.+....... ......++..
T Consensus 79 ~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 151 (244)
T smart00220 79 KKRGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPE 151 (244)
T ss_pred HhccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcC
Confidence 76532 78899999999999999999999 99999999999999999999999999998765432 2344567889
Q ss_pred cccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHH
Q 005864 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALL 652 (673)
Q Consensus 573 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 652 (673)
|+|||......++.++||||+|++++++++|..||...... ............... ......+.++.+++.+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ 223 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-------LELFKKIGKPKPPFP-PPEWKISPEAKDLIRK 223 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHHHHhccCCCCc-cccccCCHHHHHHHHH
Confidence 99999998888999999999999999999999998642111 111111111111111 1100134568899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 005864 653 CLEESPESRPTMQTVCQ 669 (673)
Q Consensus 653 cl~~dp~~Rps~~~v~~ 669 (673)
|+..+|++||++.++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999999986
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1e-32 Score=263.92 Aligned_cols=258 Identities=21% Similarity=0.271 Sum_probs=197.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CC-----cccceeeeeec
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HR-----NIVKFYGFCSH 472 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~ 472 (673)
.+++|.++..+|+|.||.|.+..+ ..+..||||+++.... ..+...-|+++++++. +. -+|.+.++|..
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k----YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK----YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH----HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 367899999999999999999954 3578999999875422 3455677999999993 22 46788899999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC----------
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---------- 542 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---------- 542 (673)
.++.++|+|.+ |-|+.+++..+. ..+++..++..|+.|+++++++||+. +++|-||||+||++.+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k 237 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPK 237 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccC
Confidence 99999999987 449999998864 46799999999999999999999999 9999999999999941
Q ss_pred ----------CCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccc
Q 005864 543 ----------EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISL 612 (673)
Q Consensus 543 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 612 (673)
+..++|+|||.|+..... .+..+.|..|+|||++.+-+++.++||||+||||+|+.||..-|..-+.
T Consensus 238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 238 KKVCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred CccceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 234899999999875433 3667889999999999999999999999999999999999998864432
Q ss_pred ccc-------cccccc-----ccccccc-CCCCCCC---------------------CcchHHHHHHHHHHHHHcccCCC
Q 005864 613 LSS-------SSSNMN-----LSLNEIL-DPRLPLP---------------------SRNIQDKLISILEVALLCLEESP 658 (673)
Q Consensus 613 ~~~-------~~~~~~-----~~~~~~~-~~~~~~~---------------------~~~~~~~~~~l~~li~~cl~~dp 658 (673)
.+. .++... ....+.+ .+++..+ -.....+..++.+++.+||..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 211 000000 0000000 0001000 00112334569999999999999
Q ss_pred CCCCCHHHHHH
Q 005864 659 ESRPTMQTVCQ 669 (673)
Q Consensus 659 ~~Rps~~~v~~ 669 (673)
.+|+|+.|++.
T Consensus 395 ~~RiTl~EAL~ 405 (415)
T KOG0671|consen 395 ARRITLREALS 405 (415)
T ss_pred cccccHHHHhc
Confidence 99999999875
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=9.1e-33 Score=288.19 Aligned_cols=242 Identities=28% Similarity=0.413 Sum_probs=188.5
Q ss_pred CCccceeccCCcEE-EEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEe
Q 005864 404 FDAEQCIGIGGQAS-VYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 481 (673)
|...+++|.|+.|+ ||+|.. +|+.||||++-.. ......+|+..++.- +|||||++++.-.++...|++.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44556799998887 588988 7899999987543 345667899999999 59999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCc-cchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---C--CceEEeccccee
Q 005864 482 CLERGSLAEILSNDGSIK-EFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---E--YEARVSDFGIAK 555 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~--~~~kl~Dfg~~~ 555 (673)
.|.. +|.+++...+... .......+.+..|++.|+++||+. +||||||||.|||++. + .+++|+|||+++
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9976 9999998742111 111134567889999999999998 9999999999999976 3 469999999999
Q ss_pred ecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhC-CCCCcccccccccccccccccccccCCC
Q 005864 556 FLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 556 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
.+..+... .....||-||+|||++....-+.++|+||+||++|+.++| .+||...-..+. .++...
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~----------NIl~~~ 729 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA----------NILTGN 729 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh----------hhhcCc
Confidence 98766543 3456799999999999998888999999999999999985 999974322111 111111
Q ss_pred CC--CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LP--LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. ... ...+. +..++|.+|++++|..||++.+|+.
T Consensus 730 ~~L~~L~-~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 730 YTLVHLE-PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cceeeec-cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 10 000 00111 5789999999999999999999974
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=4.8e-31 Score=278.58 Aligned_cols=264 Identities=17% Similarity=0.196 Sum_probs=182.9
Q ss_pred hcCCCccceeccCCcEEEEEEEe-----------------CCCCEEEEEeeccchhhhh-----------HHHHHHHHHH
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-----------------PSGEVVAVKKFHSLLLSEI-----------SVQREFLNEI 452 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-----------------~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~ 452 (673)
.++|++.++||+|+||+||+|.. ..++.||||++........ ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 46899999999999999999953 2457899999864321110 0112344577
Q ss_pred HHHhccCCCcc-----cceeeeeec--------CCeeeEEEecccCCChHHHHhcCCC---------------------C
Q 005864 453 KALTEIRHRNI-----VKFYGFCSH--------PRHSFLVYECLERGSLAEILSNDGS---------------------I 498 (673)
Q Consensus 453 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~ 498 (673)
.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77888876554 677888753 3567999999999999999974311 1
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC-ceeccccccccccc
Q 005864 499 KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-WTEFAGTFGYVAPE 577 (673)
Q Consensus 499 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE 577 (673)
..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+...... .....+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 2346788899999999999999999 9999999999999999999999999999765433221 11233478999999
Q ss_pred ccccCC----------------------cCcchhHHHHHHHHHHHHhCCC-CCcccccccccccc---cccccccccCCC
Q 005864 578 LAYTMK----------------------VTEKCDVYSFGVLALEVIKGKH-PRDFISLLSSSSSN---MNLSLNEILDPR 631 (673)
Q Consensus 578 ~~~~~~----------------------~~~~~Dv~slG~il~el~~g~~-p~~~~~~~~~~~~~---~~~~~~~~~~~~ 631 (673)
.+.... ...+.||||+||+++||++|.. ||............ ....+.......
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 875322 1234799999999999999886 66533221111000 001111111112
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCC---CCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESP---ESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp---~~Rps~~~v~~ 669 (673)
...+ .+........+++.+++..+| .+|+|++|+++
T Consensus 461 ~~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 461 YDFS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCcc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 2111 223344568889999999866 68999999985
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=248.89 Aligned_cols=259 Identities=23% Similarity=0.345 Sum_probs=196.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----eee
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HSF 477 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 477 (673)
.+..+.||-|+||.||.+.++ +|+.||.|++.... ......+.+.+|++++..++|.|++..++...-.. +.|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 344588999999999999764 89999999986543 33345678889999999999999999988775432 468
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+++|.|.. +|+.++-.. ..++-..++-...||++||.|||+. +|.||||||.|.+++.+...||||||+++..
T Consensus 134 V~TELmQS-DLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHHh-hhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccccc
Confidence 89999876 888888765 3477788888999999999999999 9999999999999999999999999999977
Q ss_pred CCCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc---------------cc
Q 005864 558 KPGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS---------------NM 620 (673)
Q Consensus 558 ~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---------------~~ 620 (673)
+.+.. ..+..+.|..|+|||.+++. .|+.+.||||.|||+.|++.++.-|.-.++.+...- ..
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 55433 34556678999999999875 589999999999999999998888865444322110 01
Q ss_pred ccccccccCCCCCCCCc-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 621 NLSLNEILDPRLPLPSR-------NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+.....++......|.. ...+.-.+...+...++..||.+|.+..+.+..
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 11112222222221110 111223346678889999999999998887653
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.5e-31 Score=236.34 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=191.3
Q ss_pred cCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecC--Ceee
Q 005864 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP--RHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~ 477 (673)
++|++++.+|+|.+++||.|. ..+.++++||+++.. ..+.+.+|+.+|..++ ||||+++++...++ ..+.
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 578889999999999999994 567899999998764 2567889999999996 99999999999765 4678
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccceee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKF 556 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~ 556 (673)
+|+||+.+.+...+-. .++...+...+.+++.||.|+|+. ||.|||+||.|+++|.. ...+++|+|+|.+
T Consensus 112 LiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhh
Confidence 9999999987776543 356677788999999999999999 99999999999999865 5699999999999
Q ss_pred cCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccc-ccc------------------
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLL-SSS------------------ 616 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~------------------ 616 (673)
+.++.. ..-.+.+..|--||.+... .|+..-|+|||||++.+|+..+.||-..... ++.
T Consensus 183 YHp~~e-YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 183 YHPGKE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred cCCCce-eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 876544 3445567788999988764 4788999999999999999999997421110 000
Q ss_pred -ccccccccccccCCCCCCCC------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 617 -SSNMNLSLNEILDPRLPLPS------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 617 -~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.-........++......+. +...-...+..+++.+.+..|-++|||++|.++
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 00000111111111111110 000112356889999999999999999999874
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-31 Score=231.39 Aligned_cols=206 Identities=23% Similarity=0.345 Sum_probs=166.9
Q ss_pred HHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC
Q 005864 397 IIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR 474 (673)
Q Consensus 397 ~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 474 (673)
+....+.......||+|++|.|-+.++ .+|+..|+|++..... .+..++...|+.+..+. .+|++|+++|......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 333444555567799999999988876 4799999999976533 33467777888876665 7999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 475 HSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
..++.||.|+- ||..+-++- ......++...-+||..+.+||.|||++. .++|||+||+|||++.+|+||+||||.
T Consensus 119 dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 119 DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999976 887665432 22356788889999999999999999985 899999999999999999999999999
Q ss_pred eeecCCCCCCceecccccccccccccc----cCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAY----TMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+..+...-. .+.-.|-..|||||.+. ...|+-||||||+|+.+.||.+++.||+
T Consensus 196 sG~L~dSiA-kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 196 SGYLVDSIA-KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred ceeehhhhH-HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 987643211 12234567899999875 3468999999999999999999999987
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.9e-30 Score=261.68 Aligned_cols=201 Identities=22% Similarity=0.339 Sum_probs=175.1
Q ss_pred CCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
-|-..+.||-|+||+|.+++ ..+...||.|.+.+...-........+.|-++|..-+.+-||+++-.|.+.+.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 46667789999999999995 44577899999987766666677889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC---
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK--- 558 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~--- 558 (673)
|++||++.++|-+-+ .|.+..+..++..+..|+++.|.. |+|||||||.|||||.||.+||.|||++.-+.
T Consensus 710 YIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999997753 588888899999999999999999 99999999999999999999999999986321
Q ss_pred ------CCCC---------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHH
Q 005864 559 ------PGSS---------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALE 599 (673)
Q Consensus 559 ------~~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 599 (673)
.++. .....+||+.|+|||++....++.-+|.||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 1100 0012458999999999999999999999999999999
Q ss_pred HHhCCCCCcc
Q 005864 600 VIKGKHPRDF 609 (673)
Q Consensus 600 l~~g~~p~~~ 609 (673)
|+.|+.||-.
T Consensus 864 m~~g~~pf~~ 873 (1034)
T KOG0608|consen 864 MLVGQPPFLA 873 (1034)
T ss_pred HhhCCCCccC
Confidence 9999999864
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-30 Score=252.18 Aligned_cols=132 Identities=24% Similarity=0.451 Sum_probs=112.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-----C---Ccccceeeeeec
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-----H---RNIVKFYGFCSH 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~ 472 (673)
.+|.+.+.||.|.|++||++.+ ...+.||+|+.+.. ....+....||.+|++++ | .+||+++++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 5788999999999999999955 46788999998764 334567788999999994 2 489999999964
Q ss_pred ----CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC
Q 005864 473 ----PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 473 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 541 (673)
+.++++|+|++ |.+|..+|.... .+.++...+.+|++||+.||.|||..| +|+|-||||+|||+.
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 56889999988 459999998764 356889999999999999999999998 999999999999994
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.2e-28 Score=237.06 Aligned_cols=212 Identities=32% Similarity=0.540 Sum_probs=185.4
Q ss_pred eccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|.+|.||++...+ |+.+++|++....... ..+.+.+|+..++.++|++++++++++......++++||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 6899999999998754 8999999987653221 357799999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecCCCCCCceec
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLKPGSSNWTEF 567 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~ 567 (673)
.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++++|||.+.............
T Consensus 79 ~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 79 KDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred HHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 99998653 3578899999999999999999999 9999999999999999 8999999999998765443223445
Q ss_pred ccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 568 AGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 568 ~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
.+...|++||..... .++.++|+|++|++++++ ..+
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~ 190 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PEL 190 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHH
Confidence 678899999998877 788999999999999999 358
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 647 LEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
.+++.+|++.+|++||++.++++.+
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhCC
Confidence 8999999999999999999998753
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-30 Score=258.56 Aligned_cols=210 Identities=24% Similarity=0.325 Sum_probs=178.9
Q ss_pred cccHHHHHHHhcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHH-----HHHHHHHHHhccC---CC
Q 005864 391 KIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQR-----EFLNEIKALTEIR---HR 461 (673)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~-----~~~~e~~~l~~l~---h~ 461 (673)
.+..+........|...+.+|.|+||.|+.|.++. ...|+||.+.+...-...+.+ ...-|+++|..++ |+
T Consensus 550 ~~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 550 NIGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCcc
Confidence 33344444445678999999999999999998764 667999988776544333333 2667999999997 99
Q ss_pred cccceeeeeecCCeeeEEEecc-cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe
Q 005864 462 NIVKFYGFCSHPRHSFLVYECL-ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL 540 (673)
Q Consensus 462 niv~l~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 540 (673)
||++++++|++++.+|++||-. ++.+|.+++... ..+++.++.-|++||+.|+++||+. +|||||||-+||.+
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k---p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenviv 703 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK---PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIV 703 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhhcc---CccchHHHHHHHHHHHhcccccccc---CceecccccccEEE
Confidence 9999999999999999999976 456999999876 4588899999999999999999999 99999999999999
Q ss_pred CCCCceEEecccceeecCCCCCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCc
Q 005864 541 SSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 541 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+.+|-+|++|||.+..... .....+.||.+|.|||++.+.+| +..-|||++|+++|-++....||.
T Consensus 704 d~~g~~klidfgsaa~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 704 DSNGFVKLIDFGSAAYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ecCCeEEEeeccchhhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999999987653 34566889999999999998887 567899999999999999999976
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=234.40 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=190.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee-eecCCeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF-CSHPRHSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~ 477 (673)
.+.|++.+.+|+|.||.+-.++++ +.+.+++|.++.+... .++|.+|...--.+ .|.||+.-++. |+..+.+.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh----HHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 456889999999999999999876 5788999998876443 67888888776666 58999987754 67778888
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-CC-CCceEEeccccee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL-SS-EYEARVSDFGIAK 555 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~~-~~~~kl~Dfg~~~ 555 (673)
.++||++.|+|.+-+...+ +-+....+++.|++.|+.|||++ ++||||||.+|||+ +. ..++|+||||..+
T Consensus 99 F~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccc
Confidence 9999999999999887754 66677889999999999999999 99999999999999 33 3579999999998
Q ss_pred ecCCCCCCceecccccccccccccccC-----CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
..... .....-+-.|.|||..... ...+.+|+|.||+++|.++||..||......+.. .-....+.....+
T Consensus 172 k~g~t---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~-Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 172 KVGTT---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP-YWEWEQWLKRKNP 247 (378)
T ss_pred ccCce---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch-HHHHHHHhcccCc
Confidence 54322 2223345679999976532 3567899999999999999999999832222111 1111222333333
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+.+ ......++.+.++.++-+.++|++|-...++.++
T Consensus 248 ~~P---~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 248 ALP---KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred cCc---hhhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 333 3334455668889999999999999666665544
No 402
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=237.29 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=196.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------C
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------R 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 474 (673)
.+|.....+|.|.- .|..|-+ -.+++||+|+...+... ....++..+|...+..+.|+|+++++.++.-. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 45666788999988 6666633 36899999998777433 44567778999999999999999999999643 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..|+|||+|.. +|...+.- +++-.+...|..|++.|++|||+. +|+||||||+||++..+..+||.|||+|
T Consensus 95 e~y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 56999999976 89988873 366788889999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-------------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN------------- 621 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~------------- 621 (673)
+..... -..+..+.+..|.|||++.+..+.+.+||||.||++.||++|+.-|.+....+++....+
T Consensus 166 r~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 875544 245667889999999999999999999999999999999999988865444332211100
Q ss_pred ----------------ccccc-ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ----------------LSLNE-ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ----------------~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+ +-|..++...+...-....+.+++.+||..||++|-+++++++
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00000 0011111111111122335788999999999999999999875
No 403
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=2e-31 Score=268.39 Aligned_cols=289 Identities=29% Similarity=0.436 Sum_probs=172.1
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCcccc-CCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSG-SVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
|+++ .+-+.++.|+.|+.+.+..|+++. =+|..+-++..|+.||||.|++. ..|..+..-+++-.|+|++|+|..++
T Consensus 65 N~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIP 142 (1255)
T KOG0444|consen 65 NQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIP 142 (1255)
T ss_pred hhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCC
Confidence 4444 344555555555555555555542 23445555566666666666665 55555555566666666666666666
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCc-------------------------cCChhhhcc
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG-------------------------SIPPEIGKL 135 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------~~~~~l~~l 135 (673)
...|.++..|-+||||+|++. ..|.....+..|++|.|++|.+.. -+|..+..+
T Consensus 143 n~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l 221 (1255)
T KOG0444|consen 143 NSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDL 221 (1255)
T ss_pred chHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhh
Confidence 666666666666666666655 233334444455555555554321 245555555
Q ss_pred ccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEc
Q 005864 136 YQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNL 215 (673)
Q Consensus 136 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 215 (673)
.+|..+|||.|.+. ..|..+..+++|+.|+|++|+|+ .+.-....-.+|++|+||.|+++ .+|.++.++++|+.|++
T Consensus 222 ~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~ 298 (1255)
T KOG0444|consen 222 HNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYA 298 (1255)
T ss_pred hhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHh
Confidence 66666666666665 56666666666666666666666 33323334456666666666666 66666666666666666
Q ss_pred cCCcCcc-CCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccC
Q 005864 216 SNNQFRK-EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 216 ~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~ 294 (673)
.+|+++- -+|..++.+.+|+.+..++|.+. ..|+.++.+..|+.|.|+.|++.+. |+++.-++.|+.||+..|+-.-
T Consensus 299 n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTL-PeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 299 NNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITL-PEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred ccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeec-hhhhhhcCCcceeeccCCcCcc
Confidence 6666653 25666666666666666666665 6666677777777777777766543 6666666777777777776655
Q ss_pred CCCC
Q 005864 295 LIPN 298 (673)
Q Consensus 295 ~~~~ 298 (673)
.+|.
T Consensus 377 MPPK 380 (1255)
T KOG0444|consen 377 MPPK 380 (1255)
T ss_pred CCCC
Confidence 5554
No 404
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-30 Score=260.59 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|+...++|.|.||.||||++. +++..|+|.++-.... ..+-..+|+-+++..+|||||.++|.+-..+..++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d---d~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD---DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc---cccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 357889999999999999999764 7999999998765433 366778899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||.+|+|.+.-+-.+ ++++.++..+++...+|++|||+. +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 91 MEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999999877654 588889999999999999999999 889999999999999999999999999987766
Q ss_pred CCCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC-CCCCCC
Q 005864 560 GSSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLP 635 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 635 (673)
.-.....+.||+.|||||+.. .+.|..++|||+.|+...|+-.-+.|.-.....+... .......+ +++.
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~----LmTkS~~qpp~lk-- 238 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALF----LMTKSGFQPPTLK-- 238 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHH----HhhccCCCCCccc--
Confidence 656667889999999999763 5678999999999999999988888733222221100 00001111 1111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.-......+-++++.|+-++|++||+++.+++
T Consensus 239 --Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 --DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred --CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11223445888999999999999999987653
No 405
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=2.4e-29 Score=248.58 Aligned_cols=268 Identities=19% Similarity=0.206 Sum_probs=205.5
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC------CCccc
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR------HRNIV 464 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv 464 (673)
+.+.--+.....|.+....|+|-|++|.+|.+. -|..||||++...... .+.=..|+++|.++. --|.+
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 333333345578999999999999999999764 4889999999765333 345567999999995 34899
Q ss_pred ceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 465 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+++..|...+++|+|||-+.- +|.++++..+....+....+..+++|+.-||..|-.. +|+|.||||.|||+++..
T Consensus 498 rl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCc
Confidence 999999999999999998765 9999999988878899999999999999999999998 999999999999999864
Q ss_pred -ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc-------ccc
Q 005864 545 -EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL-------SSS 616 (673)
Q Consensus 545 -~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~ 616 (673)
.+||||||.|...... ..+....+..|.|||++.+.+|+...|+||.||.|||+.||+.-|.+.... +..
T Consensus 574 ~iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K 651 (752)
T KOG0670|consen 574 NILKLCDFGSASFASEN--EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK 651 (752)
T ss_pred ceeeeccCccccccccc--cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence 5899999999876432 234445567899999999999999999999999999999999887532110 000
Q ss_pred ccc----------c-------------------ccc---cccccCC------CCC---CCCcchHHHHHHHHHHHHHccc
Q 005864 617 SSN----------M-------------------NLS---LNEILDP------RLP---LPSRNIQDKLISILEVALLCLE 655 (673)
Q Consensus 617 ~~~----------~-------------------~~~---~~~~~~~------~~~---~~~~~~~~~~~~l~~li~~cl~ 655 (673)
+.. . +.. +-..+.| .+. -.+........++.+|+..|+.
T Consensus 652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~ 731 (752)
T KOG0670|consen 652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI 731 (752)
T ss_pred CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence 000 0 000 0000011 000 0122334456779999999999
Q ss_pred CCCCCCCCHHHHHH
Q 005864 656 ESPESRPTMQTVCQ 669 (673)
Q Consensus 656 ~dp~~Rps~~~v~~ 669 (673)
.||++|-|..|.++
T Consensus 732 LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 732 LDPEKRITVNQALK 745 (752)
T ss_pred cChhhcCCHHHHhc
Confidence 99999999999875
No 406
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=1.5e-30 Score=262.05 Aligned_cols=276 Identities=27% Similarity=0.338 Sum_probs=231.4
Q ss_pred ccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccC
Q 005864 6 GAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFG 85 (673)
Q Consensus 6 ~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~ 85 (673)
.-+|..+-.|..|+.||||.|+++ ..|..+.+-+++-+|+||+|+|..+...-|.+++.|-.|+|++|++..++| ...
T Consensus 93 sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPP-Q~R 170 (1255)
T KOG0444|consen 93 SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPP-QIR 170 (1255)
T ss_pred CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCH-HHH
Confidence 347888889999999999999999 788888888999999999999985555567788888888898888885544 456
Q ss_pred CCCCccEEEccCCccc-------------------------cccccCccccCCCcEEEcccCccCccCChhhhccccccc
Q 005864 86 IYPNLTFLDISHNNFY-------------------------GEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHK 140 (673)
Q Consensus 86 ~l~~L~~L~L~~n~i~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 140 (673)
.+.+|++|+|++|.+. .-.|.++..+.+|..++|+.|.+. ..|+++.++.+|+.
T Consensus 171 RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~Lrr 249 (1255)
T KOG0444|consen 171 RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRR 249 (1255)
T ss_pred HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhhe
Confidence 6667777777776642 123455667788999999999999 89999999999999
Q ss_pred cccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCC-cCCccccccccccEEEccCCc
Q 005864 141 LDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG-SIPETLGNLLKVHYLNLSNNQ 219 (673)
Q Consensus 141 L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~ 219 (673)
|+||+|+|+ .+........+|++|+|++|+++ .+|+++++++.|+.|.+.+|+++- -+|..++++.+|+.+..++|.
T Consensus 250 LNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 250 LNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred eccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 999999998 55556667789999999999999 899999999999999999999863 479999999999999999999
Q ss_pred CccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEcc
Q 005864 220 FRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288 (673)
Q Consensus 220 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~ 288 (673)
+. ..|..++.+..|+.|.|+.|++. .+|+++.-++.|+.||+..|.---.+|+.-..-..|..-++.
T Consensus 328 LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 328 LE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNID 394 (1255)
T ss_pred cc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeecc
Confidence 98 79999999999999999999998 899999999999999999997655555443333455555444
No 407
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=3.1e-27 Score=229.78 Aligned_cols=199 Identities=32% Similarity=0.510 Sum_probs=172.6
Q ss_pred CCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+..+.||+|++|+||+|.... ++.+|+|.+...... ...+.+.+|++.+.+++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5677899999999999998765 899999998764332 2467889999999999999999999999998999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC-
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS- 561 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~- 561 (673)
+++++|.+++..... .+++.....++.+++.++.+||+. +++|+|++|.||+++.++.++++|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 79 CEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred cCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999999987542 178899999999999999999999 99999999999999999999999999998775432
Q ss_pred CCceeccccccccccccc-ccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 562 SNWTEFAGTFGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
.......++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334577889999998 666788899999999999999999999863
No 408
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=1e-29 Score=244.04 Aligned_cols=306 Identities=32% Similarity=0.467 Sum_probs=189.5
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
||+++ .+|+.+..+.++..|++++|.+. ..+.+++.+-.|..|+..+|+++ ..|.++.++.+|..|++.+|++...+
T Consensus 100 ~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~ 176 (565)
T KOG0472|consen 100 HNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALP 176 (565)
T ss_pred cchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCC
Confidence 45566 66777777777777777777777 55666777777777777777776 55666666666666666666666555
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCc---------------------cCCh-hhhccccc
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG---------------------SIPP-EIGKLYQL 138 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~-~l~~l~~L 138 (673)
+.... ++.|++||..+|-+. ..|..++.+.+|..|+|..|+|.. .+|. ...++++|
T Consensus 177 ~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l 254 (565)
T KOG0472|consen 177 ENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSL 254 (565)
T ss_pred HHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHHHHhcccccc
Confidence 44444 555555555555554 334444555555555555555441 2222 23355566
Q ss_pred cccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCC--------------------
Q 005864 139 HKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG-------------------- 198 (673)
Q Consensus 139 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-------------------- 198 (673)
..|||++|+++ ..|..++-+.+|.+||+++|.|+ .+|..++++ +|+.|.+.+|.+..
T Consensus 255 ~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~ 331 (565)
T KOG0472|consen 255 LVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSK 331 (565)
T ss_pred eeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHh
Confidence 66666666665 55666666666666666666666 444455555 55555555554420
Q ss_pred --------------------------------------------cCCcccccccc---ccEEEccCCcCc----------
Q 005864 199 --------------------------------------------SIPETLGNLLK---VHYLNLSNNQFR---------- 221 (673)
Q Consensus 199 --------------------------------------------~~~~~l~~l~~---L~~L~l~~n~l~---------- 221 (673)
.+|+....... .+.++++.|++.
T Consensus 332 ~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lk 411 (565)
T KOG0472|consen 332 IKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELK 411 (565)
T ss_pred hccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHH
Confidence 00000000000 233444444432
Q ss_pred -------------cCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCcccc-------------------
Q 005864 222 -------------KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS------------------- 269 (673)
Q Consensus 222 -------------~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~------------------- 269 (673)
+.+|..++.+++|.-|+|++|.+. .+|..++.+..|+.||++.|++.
T Consensus 412 elvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~ 490 (565)
T KOG0472|consen 412 ELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASN 490 (565)
T ss_pred HHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhcc
Confidence 234556667778888888888887 77888888888888888877754
Q ss_pred ----ccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcC
Q 005864 270 ----GLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRG 315 (673)
Q Consensus 270 ----~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~ 315 (673)
.+.+..+.+|.+|.+|||.+|.+...+|............+.|||.
T Consensus 491 nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 491 NQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred ccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 3344457888999999999999999988887777777777788763
No 409
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=3e-29 Score=240.74 Aligned_cols=270 Identities=29% Similarity=0.435 Sum_probs=165.6
Q ss_pred CCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 15 FTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 15 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
++.|++|+...|.++ .+|..++.+.+|.-|+|..|.|. ..| .|.+|..|.+|++..|+|..++++...++++|..||
T Consensus 182 m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLD 258 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLD 258 (565)
T ss_pred HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeee
Confidence 555555555555555 45556666666666666666665 445 566666666666666666666666667777777777
Q ss_pred ccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccccc-----------------------
Q 005864 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGE----------------------- 151 (673)
Q Consensus 95 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~----------------------- 151 (673)
|.+|+++ ..|+.+..+.+|..|++++|.|+ ..|..++++ +|+.|-+.+|.+..+
T Consensus 259 LRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~d 335 (565)
T KOG0472|consen 259 LRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDD 335 (565)
T ss_pred ccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccC
Confidence 7777776 45666677777777777777777 466677777 777777777765210
Q ss_pred --------------CCcc-c---cCCCC--------------------------CCEEEccCcccc--------------
Q 005864 152 --------------IPIE-L---GNLKS--------------------------LNYLVLNGNKLS-------------- 173 (673)
Q Consensus 152 --------------~~~~-l---~~l~~--------------------------L~~L~L~~n~l~-------------- 173 (673)
.+.. + ..+.+ ++..++++|++.
T Consensus 336 glS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT 415 (565)
T KOG0472|consen 336 GLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVT 415 (565)
T ss_pred CCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHH
Confidence 0000 0 00011 233444444443
Q ss_pred ---------ccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcC
Q 005864 174 ---------GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFL 244 (673)
Q Consensus 174 ---------~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l 244 (673)
+.+|..++.+++|+.|+|++|.+. .+|..++.+-.|+.|+++.|++. ..|..+-.+..|+.+-.++|++
T Consensus 416 ~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi 493 (565)
T KOG0472|consen 416 DLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQI 493 (565)
T ss_pred HHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccc
Confidence 122223334444445555544444 34444444444555555555444 3444444444444444445555
Q ss_pred CCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCcccc
Q 005864 245 GGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 245 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
....+..+.+|.+|..|||.+|.+.. +|..+++|.+|++|+++||+|.
T Consensus 494 ~~vd~~~l~nm~nL~tLDL~nNdlq~-IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 494 GSVDPSGLKNMRNLTTLDLQNNDLQQ-IPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccChHHhhhhhhcceeccCCCchhh-CChhhccccceeEEEecCCccC
Confidence 54455558899999999999999984 5778999999999999999998
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=8e-27 Score=226.97 Aligned_cols=198 Identities=25% Similarity=0.367 Sum_probs=164.3
Q ss_pred HHHHhcCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 397 IIRATKNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 397 ~~~~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
+....+.|..++.||.|.|++||+|.+. .++.||+|.+.... ...++..|+++|..+ .+.||+++.+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFR 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhc
Confidence 3444577999999999999999999542 47789999885432 245688999999999 5999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEec
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSD 550 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~D 550 (673)
..+...+|+||++.....++... ++..++..++..+..||+++|.+ |||||||||+|++.+.. +.-.|+|
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 99999999999999999998764 56778888999999999999999 99999999999999754 6789999
Q ss_pred ccceeecCCCC--------------C------------------------------Cceeccccccccccccccc-CCcC
Q 005864 551 FGIAKFLKPGS--------------S------------------------------NWTEFAGTFGYVAPELAYT-MKVT 585 (673)
Q Consensus 551 fg~~~~~~~~~--------------~------------------------------~~~~~~~~~~y~aPE~~~~-~~~~ 585 (673)
||+|...+... . .....+||+||+|||++.. ...+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 99997221000 0 0012459999999998864 4578
Q ss_pred cchhHHHHHHHHHHHHhCCCCCc
Q 005864 586 EKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 586 ~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+++||||.|||+.-+++++.||-
T Consensus 257 taiDiws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred Cccceeeccceeehhhccccccc
Confidence 89999999999999999999973
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1e-25 Score=209.97 Aligned_cols=165 Identities=23% Similarity=0.240 Sum_probs=125.1
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|||.++++..+ ..+++.+++.|+.|++.||+|||+. + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 68999998643 4589999999999999999999998 5 999999999999999 99998764322
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHH-
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI- 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 644 (673)
..|++.|+|||++.+..++.++|||||||++|||++|+.||........... ... .......+...........
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~ 138 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILE---ILL-NGMPADDPRDRSNLESVSAA 138 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHH---HHH-HHhccCCccccccHHHHHhh
Confidence 2578999999999999999999999999999999999999864322111000 000 0001111100011122222
Q ss_pred -HHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 645 -SILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 645 -~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
++.+++.+||+.+|.+||++.|+++.+.
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 5899999999999999999999998763
No 412
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1.2e-26 Score=265.50 Aligned_cols=194 Identities=20% Similarity=0.228 Sum_probs=139.9
Q ss_pred ccCC-Ccccceeeee-------ecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 005864 457 EIRH-RNIVKFYGFC-------SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528 (673)
Q Consensus 457 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 528 (673)
.++| +||++++++| ...+..+.++||+ +++|.+++.... ..+++.++..++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3455 6888888887 2334567888987 459999997543 4589999999999999999999999 99
Q ss_pred EEecCCCCCeEeCC-------------------CCceEEecccceeecCCCC----------------CCceeccccccc
Q 005864 529 VHRDISSKNVLLSS-------------------EYEARVSDFGIAKFLKPGS----------------SNWTEFAGTFGY 573 (673)
Q Consensus 529 vH~dlk~~Nill~~-------------------~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~~y 573 (673)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4456677777765421100 000123578889
Q ss_pred ccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHc
Q 005864 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLC 653 (673)
Q Consensus 574 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 653 (673)
||||++.+..++.++|||||||++|||++|..|+...... ..........+. ..........++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT------MSSLRHRVLPPQ-------ILLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH------HHHHHHhhcChh-------hhhcCHHHHHHHHHh
Confidence 9999999999999999999999999999999886522110 000000111111 011123456788899
Q ss_pred ccCCCCCCCCHHHHHH
Q 005864 654 LEESPESRPTMQTVCQ 669 (673)
Q Consensus 654 l~~dp~~Rps~~~v~~ 669 (673)
|+++|.+||++.|+++
T Consensus 249 L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 249 LHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCCChhhCcChHHHhh
Confidence 9999999999999985
No 413
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.7e-26 Score=207.87 Aligned_cols=248 Identities=20% Similarity=0.318 Sum_probs=189.7
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
......|.+...|+.|+|++. |..+++|++..... .....++|..|.-.++-+.||||++++|.|..+....++..||
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCccccccccc-Ccchhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 344556889999999999994 55666677654322 2334578999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeE-EecCCCCCeEeCCCCceEEe--cccceeecCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV-HRDISSKNVLLSSEYEARVS--DFGIAKFLKPG 560 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv-H~dlk~~Nill~~~~~~kl~--Dfg~~~~~~~~ 560 (673)
+.|+|+..+++... -..+-.++.+.+.++|+|++|||+.. +++ ---|.++.|++|++.+++|+ |--++..
T Consensus 270 p~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfsfq---- 342 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ---- 342 (448)
T ss_pred cchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceeeee----
Confidence 99999999998753 45678899999999999999999974 444 44689999999999888774 3222211
Q ss_pred CCCceecccccccccccccccCCcC---cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVT---EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~---~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.....-.+.||+||.+...+.+ .++|+|||++++||+.|+..||...+..+-..... -+-+...++
T Consensus 343 ---e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----leglrv~ip---- 411 (448)
T KOG0195|consen 343 ---EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----LEGLRVHIP---- 411 (448)
T ss_pred ---ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh----hccccccCC----
Confidence 1122346889999999876644 47999999999999999999998665544322111 122222222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+..+..+.+++.-|.+.||.+||.++.++-.|||
T Consensus 412 --pgis~hm~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 412 --PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred --CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 2334458889999999999999999999998875
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.6e-27 Score=228.75 Aligned_cols=292 Identities=21% Similarity=0.228 Sum_probs=230.8
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccC-cccccccccccC
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ-NHLTGNISEVFG 85 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~-n~i~~~~~~~~~ 85 (673)
.+|..+. +..+.++|..|+|+.+.+++|+.+++|+.|||++|+|+.+.|++|.++++|.+|.+-+ |+|+.++.++|.
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 5666665 5778899999999988899999999999999999999988999999999988887777 889999999999
Q ss_pred CCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccc------------ccCC
Q 005864 86 IYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV------------GEIP 153 (673)
Q Consensus 86 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~------------~~~~ 153 (673)
++..|+.|.+.-|++.-+..++|..+++|..|.+.+|.+..+--..|..+.+++.+.+..|.+. ...|
T Consensus 138 gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ 217 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNP 217 (498)
T ss_pred hHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhch
Confidence 9999999999999998888888999999999999999988554458888889999988888732 2234
Q ss_pred ccccCCCCCCEEEccCccccccCCccccC-CCCCCEEEeCCCCCCCcCC-ccccccccccEEEccCCcCccCCchhhhcc
Q 005864 154 IELGNLKSLNYLVLNGNKLSGNLPRVLGS-LSELEYLDLSTNKLSGSIP-ETLGNLLKVHYLNLSNNQFRKEFPVELEKL 231 (673)
Q Consensus 154 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 231 (673)
..++...-..-..+..+++..+.+..|.. +.++..=..+.+...+..| ..|..+++|+.|+|++|+|+.+-+.+|.++
T Consensus 218 ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~ 297 (498)
T KOG4237|consen 218 IETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGA 297 (498)
T ss_pred hhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcch
Confidence 44444445555555666665444444432 1222111122332333444 468899999999999999999989999999
Q ss_pred cCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCc
Q 005864 232 VQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300 (673)
Q Consensus 232 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 300 (673)
.+++.|.|..|+|.......|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|++.+-..-.+
T Consensus 298 a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~w 366 (498)
T KOG4237|consen 298 AELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAW 366 (498)
T ss_pred hhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHH
Confidence 999999999999987777788999999999999999999999999999999999999999876654333
No 415
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=8.6e-24 Score=214.14 Aligned_cols=168 Identities=21% Similarity=0.182 Sum_probs=129.7
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeC--CCCEEEEEeeccchh--hhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELP--SGEVVAVKKFHSLLL--SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
....++|.+.+.||+|+||+||+|.+. +++.||||+...... ......+.+.+|++++.+++|+|+++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 344578999999999999999999764 577889998653211 1223456799999999999999999633322
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC-CCCCeEeCCCCceEEeccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI-SSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg 552 (673)
+..++||||++|++|... ... . ...++.++++||+|||+. +|+|||| ||+||+++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~~---~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RPH---G------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Ccc---c------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999732 111 1 135788999999999999 9999999 9999999999999999999
Q ss_pred ceeecCCCCCC--------ceeccccccccccccccc
Q 005864 553 IAKFLKPGSSN--------WTEFAGTFGYVAPELAYT 581 (673)
Q Consensus 553 ~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~ 581 (673)
+|+.+...... .....+++.|+|||++..
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99977543211 134557788999998753
No 416
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-25 Score=216.25 Aligned_cols=296 Identities=18% Similarity=0.161 Sum_probs=204.1
Q ss_pred EEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccC-Cc
Q 005864 21 LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH-NN 99 (673)
Q Consensus 21 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~-n~ 99 (673)
.+-++-+++ .+|..+. ..-+.++|..|+|+.+.+.+|+.+++|+.|||++|+|+.|.+.+|.++++|..|-+.+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 344444555 4554443 3566777777777766677777777777777777777777777777777777766655 77
Q ss_pred cccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccc-----
Q 005864 100 FYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG----- 174 (673)
Q Consensus 100 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~----- 174 (673)
|+.+..+.|.++..|+.|.+.-|++.-+..++|..+++|..|.+.+|.+..+-...|..+.+++.+.+..|.+-.
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 777777777777777777777777776666777777777777777777764444466777777777777766321
Q ss_pred -------cCCccccCCCCCCEEEeCCCCCCCcCCcccccc-ccccEEEccCCcCccCC-chhhhcccCCCeEeecCCcCC
Q 005864 175 -------NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNL-LKVHYLNLSNNQFRKEF-PVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 175 -------~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l-~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~ls~N~l~ 245 (673)
..|..++...-..-..+.++++....+..|... ..+.+=..+.+....+. ...|..+++|++|+|++|+|+
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~ 287 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT 287 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc
Confidence 112222222223333333444433333333321 12211112223233333 356999999999999999999
Q ss_pred CCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccc-cCccccccCCcCCCCC
Q 005864 246 GEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ-YDPIQALRGNRGLCGD 319 (673)
Q Consensus 246 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~ 319 (673)
++-+.+|.++..|++|.|..|+|..+....|.++.+|+.|+|.+|+|+...|.++... ......+.+||+.|..
T Consensus 288 ~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 288 RIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred hhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 9999999999999999999999999989999999999999999999999999876554 3456778899998853
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=1.3e-22 Score=221.81 Aligned_cols=254 Identities=26% Similarity=0.284 Sum_probs=198.4
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.|+ .+|+.+. ++|+.|++++|+++. +|. ..++|++|+|++|+|+ .+|. ..++|+.|+|++|.+..++.
T Consensus 211 ~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~---lp~sL~~L~Ls~N~L~~Lp~ 279 (788)
T PRK15387 211 SGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA 279 (788)
T ss_pred CCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccC---cccccceeeccCCchhhhhh
Confidence 5676 6888886 489999999999994 553 3578999999999998 4453 24688999999999886543
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
.+++|+.|+|++|+++.++. .+++|+.|+|++|++++ +|.. ..+|+.|++++|+++ .+|.. .++
T Consensus 280 ----lp~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~-~LP~l---p~~ 343 (788)
T PRK15387 280 ----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT-SLPTL---PSG 343 (788)
T ss_pred ----chhhcCEEECcCCccccccc----cccccceeECCCCcccc-CCCC---cccccccccccCccc-ccccc---ccc
Confidence 23678899999999985432 34789999999999995 4432 246888999999997 45532 258
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|+.|+|++|+|+. +|.. .++|+.|++++|.++ .+|.. ..+|+.|++++|+|++ +|.. .++|+.|++++
T Consensus 344 Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~ 411 (788)
T PRK15387 344 LQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSG 411 (788)
T ss_pred cceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccC
Confidence 9999999999994 5543 357888999999998 46654 3579999999999985 4433 25799999999
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~ 299 (673)
|.++ .+|.. ..+|+.|++++|+|+. +|..+..+++|+.|+|++|+|++.++..
T Consensus 412 N~Ls-sIP~l---~~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs~N~Ls~~~~~~ 464 (788)
T PRK15387 412 NRLT-SLPML---PSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQA 464 (788)
T ss_pred CcCC-CCCcc---hhhhhhhhhccCcccc-cChHHhhccCCCeEECCCCCCCchHHHH
Confidence 9998 56653 3578899999999985 5888999999999999999999877653
No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=3.3e-22 Score=204.14 Aligned_cols=255 Identities=22% Similarity=0.229 Sum_probs=187.6
Q ss_pred CCCccceeccCCcEEEEEEEeCCC--CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC----Ccccceeeee-ecCCe
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSG--EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH----RNIVKFYGFC-SHPRH 475 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~ 475 (673)
+|.+.+.||+|+||.||.+..... ..+|+|......... ...+..|..++..+.. +++..+++.. ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 789999999999999999976553 478888765532221 1156778888888863 6899999999 57888
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-----CceEEec
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-----YEARVSD 550 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-----~~~kl~D 550 (673)
.++||+.+ |.+|.++..... ...++..+..+|+.|+..+|.++|+. |++||||||.|+++... ..+.+.|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 99999966 669999886655 46799999999999999999999999 99999999999999765 4699999
Q ss_pred cccee--ecCCCCC-------C-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc
Q 005864 551 FGIAK--FLKPGSS-------N-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 551 fg~~~--~~~~~~~-------~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 620 (673)
||+++ .+..... . .....||..|+++....+...+.+.|+||++.++.|+..|..||.............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 99998 3211111 1 123559999999999999999999999999999999999999986443221110000
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 621 NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.......... .....+.++.++...+-..+..++|....+...++
T Consensus 251 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~ 295 (322)
T KOG1164|consen 251 KDPRKLLTDR-------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLK 295 (322)
T ss_pred HHhhhhcccc-------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHH
Confidence 0000000110 01112234555555566688999999988877653
No 419
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=2.2e-21 Score=201.34 Aligned_cols=260 Identities=28% Similarity=0.392 Sum_probs=198.3
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCC-cccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR-NIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 482 (673)
|...+.+|.|+||.||++... ..+++|.+.............+.+|+..+..+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999876 88999998776544433578899999999999988 799999999777778999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceeecCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGS 561 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~ 561 (673)
+.++++.+++........++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997777653112577888999999999999999999 999999999999999988 79999999998665433
Q ss_pred C------Cceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--
Q 005864 562 S------NWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP-- 630 (673)
Q Consensus 562 ~------~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 630 (673)
. ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||........ .............+
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA-TSQTLKIILELPTPSL 235 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc-HHHHHHHHHhcCCccc
Confidence 2 2356789999999999987 5788899999999999999999999764332100 00000001111100
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...............+.+++..|+..+|..|.++.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 000000000122345788999999999999999887654
No 420
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=4.3e-23 Score=223.18 Aligned_cols=254 Identities=19% Similarity=0.239 Sum_probs=191.2
Q ss_pred CccceeccCCcEEEEEEEe-CCCCEEEEEeecc---chhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 405 DAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHS---LLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
...+++|.|++|.|+.+.. ......+.|.+.. ....+......+..|+.+-..++|||++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567899999998887744 3344455554331 11222222333778888889999999998888887776666669
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||++ +|...+...+ .+....+..+++|+..|++|+|+. |+.|||+|++|++++.++.+||+|||.+....-+
T Consensus 401 E~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 9999998752 366678888999999999999999 9999999999999999999999999999866433
Q ss_pred CC----CceecccccccccccccccCCcCc-chhHHHHHHHHHHHHhCCCCCcccccccccc-cccccccccccCCCCCC
Q 005864 561 SS----NWTEFAGTFGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFISLLSSSS-SNMNLSLNEILDPRLPL 634 (673)
Q Consensus 561 ~~----~~~~~~~~~~y~aPE~~~~~~~~~-~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 634 (673)
.. ......|+-.|+|||.+.+..|++ ..||||.|+++..|++|+.||..+...+... ......... ....
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~----~~~~ 549 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRN----IFEG 549 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccc----cccC
Confidence 22 235678999999999999999877 5899999999999999999987554332211 111111111 1112
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.......+.+...++-++++.||.+|-|++++++
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 22334455667888999999999999999999986
No 421
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=8e-22 Score=185.15 Aligned_cols=186 Identities=14% Similarity=0.151 Sum_probs=141.5
Q ss_pred ccCcccHHHHHHH--hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHH------HHHHHHHHhccC
Q 005864 388 FEGKIVYEEIIRA--TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQRE------FLNEIKALTEIR 459 (673)
Q Consensus 388 ~~~~~~~~~~~~~--~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e~~~l~~l~ 459 (673)
.+.+..|.++... .++|...+++|.|+||.||.+.. ++..+|+|.+.......+..... +.+|+..+.+++
T Consensus 15 ~~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~ 93 (232)
T PRK10359 15 KDNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR 93 (232)
T ss_pred cCCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 3344444444432 57899999999999999999866 67789999997655444433333 689999999999
Q ss_pred CCcccceeeeeecC--------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 005864 460 HRNIVKFYGFCSHP--------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHR 531 (673)
Q Consensus 460 h~niv~l~~~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 531 (673)
||+|..+.+++... +..++||||++|.+|.++.. ++. ....+++.++..+|+. |++||
T Consensus 94 ~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~ 159 (232)
T PRK10359 94 SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSG 159 (232)
T ss_pred HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccC
Confidence 99999999886532 35789999999999988732 221 2456899999999999 99999
Q ss_pred cCCCCCeEeCCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHH
Q 005864 532 DISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601 (673)
Q Consensus 532 dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 601 (673)
|++|+||++++++ ++++|||........... ..+.....+..++|+||||+.+....
T Consensus 160 Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 160 DPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCChHHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999999999988 999999988654221111 11334445667999999999977654
No 422
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=1.4e-22 Score=217.77 Aligned_cols=245 Identities=23% Similarity=0.259 Sum_probs=184.5
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccch-hhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLL-LSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|..++.+|++.|=+|.+|+++.|. |+||++-+.. ...-....+-..|++ ....+|||.+++.-+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5777899999999999999998888 8888885542 122222333344444 555689999999998888888899999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec--CC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL--KP 559 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~--~~ 559 (673)
|... +|+|.+..+ .-+...+.+.|+.|++.|+.-+|.. ||+|||||.+|||++.=..+.|+||..-+.. ..
T Consensus 102 yvkh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9988 999999765 4577888889999999999999999 9999999999999999888999999877532 11
Q ss_pred CC-CCceecc----cccccccccccccCC-----------cCcchhHHHHHHHHHHHHh-CCCCCccccccccc---ccc
Q 005864 560 GS-SNWTEFA----GTFGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS---SSN 619 (673)
Q Consensus 560 ~~-~~~~~~~----~~~~y~aPE~~~~~~-----------~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~---~~~ 619 (673)
++ ...+.+. .-..|.|||.+.... .+++.||||+||+++|+++ |++||...+...-. ...
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 11 1122222 234699999875421 5678999999999999998 78888855443211 111
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..++++-|. .+..++..|++.||++|-+++++++.
T Consensus 255 ~e~~Le~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 255 PEQLLEKIEDV--------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhCcCc--------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 12222222222 37789999999999999999999875
No 423
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=1.3e-20 Score=222.50 Aligned_cols=274 Identities=22% Similarity=0.273 Sum_probs=148.8
Q ss_pred cCCCcccCCC-CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcc-ccccccccc
Q 005864 7 AIPPSVGNFT-NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNH-LTGNISEVF 84 (673)
Q Consensus 7 ~~p~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~-i~~~~~~~~ 84 (673)
.+|+.|..++ +|+.|.+.++.++ ..|..| ...+|+.|+|++|++. .++..+..+++|+.|+|++|. +..+ + .+
T Consensus 579 ~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~i-p-~l 653 (1153)
T PLN03210 579 HLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEI-P-DL 653 (1153)
T ss_pred ecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcC-C-cc
Confidence 4555555543 3666666666555 445444 3456666666666665 445556666666666666553 3322 2 25
Q ss_pred CCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCE
Q 005864 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNY 164 (673)
Q Consensus 85 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~ 164 (673)
+.+++|++|+|++|......+..+.++++|+.|++++|.....+|..+ ++++|+.|++++|......|.. .++|+.
T Consensus 654 s~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~ 729 (1153)
T PLN03210 654 SMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISW 729 (1153)
T ss_pred ccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCe
Confidence 566666666666654444455566666666666666643333444433 4566666666665443333321 245566
Q ss_pred EEccCccccccCCccc------------------------------cCCCCCCEEEeCCCCCCCcCCccccccccccEEE
Q 005864 165 LVLNGNKLSGNLPRVL------------------------------GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214 (673)
Q Consensus 165 L~L~~n~l~~~~~~~l------------------------------~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 214 (673)
|++++|.+. .+|..+ ...++|+.|++++|.....+|..+.++++|+.|+
T Consensus 730 L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~ 808 (1153)
T PLN03210 730 LDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLE 808 (1153)
T ss_pred eecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEE
Confidence 666666654 233221 1123555555555554445566666666666666
Q ss_pred ccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccC-cccc
Q 005864 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY-NELL 293 (673)
Q Consensus 215 l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~-N~l~ 293 (673)
+++|...+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|+|++|.++. +|..+..+++|+.|++++ |.+.
T Consensus 809 Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~-iP~si~~l~~L~~L~L~~C~~L~ 883 (1153)
T PLN03210 809 IENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEE-VPWWIEKFSNLSFLDMNGCNNLQ 883 (1153)
T ss_pred CCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCcc-ChHHHhcCCCCCEEECCCCCCcC
Confidence 66554333344333 4556666666665443333322 2456666666666653 355666677777777776 3344
Q ss_pred CC
Q 005864 294 GL 295 (673)
Q Consensus 294 ~~ 295 (673)
+.
T Consensus 884 ~l 885 (1153)
T PLN03210 884 RV 885 (1153)
T ss_pred cc
Confidence 43
No 424
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=4.3e-21 Score=185.74 Aligned_cols=236 Identities=19% Similarity=0.208 Sum_probs=156.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC----------Ccccceeeeee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH----------RNIVKFYGFCS 471 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~ 471 (673)
.+...+.||.|+++.||.+++. +|+.+|||++...........+.+.+|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3445688999999999999775 599999999977665555567888888766666432 22222222221
Q ss_pred ---------cC---C-----eeeEEEecccCCChHHHHhc---C-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEE
Q 005864 472 ---------HP---R-----HSFLVYECLERGSLAEILSN---D-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVH 530 (673)
Q Consensus 472 ---------~~---~-----~~~lv~e~~~~gsL~~~l~~---~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 530 (673)
.. . ..+++|+-+.+ +|.+++.. . .....+....+..+..|+.+.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 11 1 12578887754 88887643 2 1123466677788889999999999999 9999
Q ss_pred ecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccccccccccccc--------CCcCcchhHHHHHHHHHHHHh
Q 005864 531 RDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIK 602 (673)
Q Consensus 531 ~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~el~~ 602 (673)
+||+|+|++++++|.++++||+........ ......+..|.|||.... ..++.+.|.|++|+++|.|.+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 999999999999999999999988765321 111344577999997643 247889999999999999999
Q ss_pred CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCC
Q 005864 603 GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661 (673)
Q Consensus 603 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 661 (673)
|..||+......... . .+ ..+. +.+..+..+|..+|+++|.+|
T Consensus 246 ~~lPf~~~~~~~~~~----~--------~f---~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPE----W--------DF---SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSG----G--------GG---TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCcccccc----c--------cc---hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999998442211110 0 11 1233 666779999999999999988
No 425
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=2e-21 Score=181.24 Aligned_cols=143 Identities=20% Similarity=0.214 Sum_probs=110.7
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhH-----------------------HHHHHHHHHHHHhccCCCcc
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEIS-----------------------VQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~h~ni 463 (673)
...||+|+||.||+|..++|+.||||+++........ .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998889999999999764321111 01223459999999988877
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHH-hhcCCCCeEEecCCCCCeEeCC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM-HHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dlk~~Nill~~ 542 (673)
.....+... ..++||||++++++....... ..+++.....++.|++.+|.|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 544433322 238999999998776553322 3478889999999999999999 688 999999999999998
Q ss_pred CCceEEecccceeecC
Q 005864 543 EYEARVSDFGIAKFLK 558 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~ 558 (673)
++.++++|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999997543
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=1.6e-21 Score=175.48 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=189.1
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeee
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCS 471 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 471 (673)
.+++.+ ..+|.+++.||.|+||.+|.| ...+|..||||.-..... ...+..|..+...++ ...|..+..|..
T Consensus 8 ~~~~iv-~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~ 81 (341)
T KOG1163|consen 8 LEELIV-GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGT 81 (341)
T ss_pred hhhhee-ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhcc
Confidence 344443 367999999999999999999 557899999998544321 245678899999896 567888888888
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEE
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARV 548 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl 548 (673)
+...-.+|||.. |.||.++..-+. ..++..+++-+|-|+..-++|+|.+ +++||||||+|+++.-+ ..+.+
T Consensus 82 e~~ynvlVMdLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 82 EKDYNVLVMDLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred ccccceeeeecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEE
Confidence 999999999977 569999988764 4689999999999999999999999 89999999999999654 46899
Q ss_pred ecccceeecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc
Q 005864 549 SDFGIAKFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 621 (673)
+|||+|+.+..... ......||.+|.+-....+...+...|+=|+|.++.+.-.|..||.+...... .
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-----~ 230 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-----K 230 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-----H
Confidence 99999998754322 12346799999988888788888899999999999999999999986543211 1
Q ss_pred cccccccCCCCCCCCc-chHHHHHHHHHHHHHcccCCCCCCCCHH
Q 005864 622 LSLNEILDPRLPLPSR-NIQDKLISILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ 665 (673)
...+.+...++..+.+ .....+.++.-.+.-|-..--++-|...
T Consensus 231 QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 231 QKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred HHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 1122222333322211 0112233455556666666555656543
No 427
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.85 E-value=5.3e-23 Score=217.65 Aligned_cols=298 Identities=31% Similarity=0.357 Sum_probs=208.5
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.+.+.++..+.++.. .|+|++|.+. . -.+..+.+|+.|....|+++... -.-++|+.|+.++|.++.+..
T Consensus 166 n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~ 236 (1081)
T KOG0618|consen 166 NVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV 236 (1081)
T ss_pred hhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecc
Confidence 4556666666666666 6777777776 2 23566677777777777776321 223667777777777773221
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
. ....+|+++++++|+++..+ +.++.+.+|+.|...+|.++ .+|..+...++|+.|++..|.+. .+|..+..+++
T Consensus 237 -~-p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~s 311 (1081)
T KOG0618|consen 237 -H-PVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKS 311 (1081)
T ss_pred -c-cccccceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccce
Confidence 1 23457889999999888655 88888899999999999986 67777888888888888888887 66777777888
Q ss_pred CCEEEccCccccccCCccccC-------------------------CCCCCEEEeCCCCCCCcCCccccccccccEEEcc
Q 005864 162 LNYLVLNGNKLSGNLPRVLGS-------------------------LSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLS 216 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~-------------------------l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 216 (673)
|++|+|..|+|....+..|.. ++.|+.|.+.+|.+++..-..+.++++|+.|+|+
T Consensus 312 L~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLs 391 (1081)
T KOG0618|consen 312 LRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLS 391 (1081)
T ss_pred eeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeec
Confidence 888888888887322211111 1234556667777776655566777788888888
Q ss_pred CCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCC-
Q 005864 217 NNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL- 295 (673)
Q Consensus 217 ~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~- 295 (673)
+|++.......+.+++.|+.|+||+|+++ .+|..+..++.|++|...+|++... | .+..++.|+.+|++.|.|+..
T Consensus 392 yNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f-P-e~~~l~qL~~lDlS~N~L~~~~ 468 (1081)
T KOG0618|consen 392 YNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF-P-ELAQLPQLKVLDLSCNNLSEVT 468 (1081)
T ss_pred ccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec-h-hhhhcCcceEEecccchhhhhh
Confidence 88887666667777888888888888887 6777777777777777777777644 4 677778888888888887754
Q ss_pred CCCCcccccCccccccCCcCC
Q 005864 296 IPNSTGFQYDPIQALRGNRGL 316 (673)
Q Consensus 296 ~~~~~~~~~~~~~~~~~n~~~ 316 (673)
+|....+.......+.||.++
T Consensus 469 l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 469 LPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhhhCCCcccceeeccCCccc
Confidence 343444455556667777764
No 428
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=1.1e-20 Score=206.72 Aligned_cols=258 Identities=27% Similarity=0.275 Sum_probs=200.1
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
..-..|+|++|.++ .+|..+. ++|+.|++++|+++ .+|. .+++|++|+|++|+|+.++. ..++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~LtsLP~----lp~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCcccC----cccccceeec
Confidence 44678999999999 6787776 48999999999998 4564 35899999999999997653 3578999999
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|.++.+.. .+.+|+.|++++|+++. +|. ..++|+.|++++|++++ +|.. ..+|+.|++++|++++
T Consensus 270 s~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchhhhhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-
Confidence 9999985432 23678999999999994 454 24789999999999984 4542 2478899999999984
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+|.. ..+|+.|+|++|+|+ .+|.. ..+|+.|++++|+|+. +|.. ..+|+.|++++|.|+ .+|.. .
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l---~ 401 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVL---P 401 (788)
T ss_pred cccc---ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCc---c
Confidence 5532 258999999999999 45643 3578899999999995 4543 247999999999998 45643 3
Q ss_pred CcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCC
Q 005864 256 ESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGL 316 (673)
Q Consensus 256 ~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 316 (673)
++|+.|++++|+|+++ |.. ..+|+.|++++|+++..+.....+.....+.+.+|+..
T Consensus 402 s~L~~LdLS~N~LssI-P~l---~~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 402 SELKELMVSGNRLTSL-PML---PSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred cCCCEEEccCCcCCCC-Ccc---hhhhhhhhhccCcccccChHHhhccCCCeEECCCCCCC
Confidence 6899999999999875 543 34688999999999965444444555566777777643
No 429
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=4.3e-21 Score=211.58 Aligned_cols=248 Identities=27% Similarity=0.373 Sum_probs=187.4
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.+.+.|+|+++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+++.++... .++|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsLP~~l---~~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTSIPATL---PDTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccccCChhh---hccccEEEC
Confidence 35788999999988 5676654 57999999999998 4565443 58999999999998665432 247899999
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|.+..+ +..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~~L-P~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRITEL-PERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccCcC-ChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-
Confidence 99998854 33332 57899999999998 4566553 48999999999988 4554443 578899999999984
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+|..+ .++|+.|++++|.++ .+|..+. ++|+.|++++|+++. +|..+. ++|+.|+|++|.++ .+|..+.
T Consensus 319 LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~-- 387 (754)
T PRK15370 319 LPETL--PPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALT-NLPENLP-- 387 (754)
T ss_pred CCccc--cccceeccccCCccc-cCChhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCC-CCCHhHH--
Confidence 45433 268999999999998 4666554 689999999999884 565554 58999999999998 5666554
Q ss_pred CcccEEEecCccccccCcc----ccccCCCccEEEccCccccC
Q 005864 256 ESLEKLNVSHNNLSGLIPS----CFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 256 ~~L~~L~l~~N~l~~~~~~----~~~~~~~L~~l~l~~N~l~~ 294 (673)
..|+.|++++|+|++. |. .+..++.+..|++.+|+++.
T Consensus 388 ~sL~~LdLs~N~L~~L-P~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 388 AALQIMQASRNNLVRL-PESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHHHhhccCCcccC-chhHHHHhhcCCCccEEEeeCCCccH
Confidence 3688999999999854 43 33445888999999999873
No 430
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=1.9e-20 Score=176.53 Aligned_cols=199 Identities=21% Similarity=0.331 Sum_probs=169.4
Q ss_pred cCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
-.|.+++.||.|.||.++.| .+-+++.||||.-... +...++..|....+.+ ..+.|..++-|..++.+-.+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 47999999999999999999 4458999999974332 2245667788888888 589999999888888888999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-----ceEEecccce
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-----EARVSDFGIA 554 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfg~~ 554 (673)
+|.+ |-||.|+..-++ ..|+..++..||.|+..-++|+|++ .+|.|||||+|+||...+ .+.++|||+|
T Consensus 103 idLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9977 569999988776 5699999999999999999999999 999999999999997543 4899999999
Q ss_pred eecCCCCCC-------ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 555 KFLKPGSSN-------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 555 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
+.+...... .....||.+||+-....+.+.+...|.=|+|=++.+.+.|..||.+..
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 987554322 234679999999999999999999999999999999999999998654
No 431
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.85 E-value=3.7e-20 Score=218.60 Aligned_cols=272 Identities=22% Similarity=0.246 Sum_probs=195.1
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCC
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGI 86 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~ 86 (673)
.+|..| ...+|++|+|++|.+. .++..+..+++|+.|+|++|.....+| .++.+++|++|+|++|......+..+..
T Consensus 603 ~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~ 679 (1153)
T PLN03210 603 CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQY 679 (1153)
T ss_pred CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhc
Confidence 566666 4577888888888777 456667777788888887765433555 3677777888888777544455566777
Q ss_pred CCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCcc-----------
Q 005864 87 YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE----------- 155 (673)
Q Consensus 87 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~----------- 155 (673)
+++|+.|++++|.--...+..+ ++++|+.|+|++|......|.. .++|++|++++|.+. .+|..
T Consensus 680 L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l 754 (1153)
T PLN03210 680 LNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELIL 754 (1153)
T ss_pred cCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccc
Confidence 7777777777753322333333 5667777777766544333322 245566666666554 22321
Q ss_pred -------------------ccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEcc
Q 005864 156 -------------------LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLS 216 (673)
Q Consensus 156 -------------------l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 216 (673)
....++|+.|+|++|.....+|..+.++++|+.|++++|...+.+|..+ ++++|+.|+++
T Consensus 755 ~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls 833 (1153)
T PLN03210 755 CEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLS 833 (1153)
T ss_pred cccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECC
Confidence 1123588999999998777889999999999999999986544777765 78999999999
Q ss_pred CCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCc-cccccCccccccCCCccEEEccCccc
Q 005864 217 NNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHN-NLSGLIPSCFEGMHGLSCIDISYNEL 292 (673)
Q Consensus 217 ~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~~~~L~~l~l~~N~l 292 (673)
+|......|.. ..+|+.|+|++|.++ .+|..+..+++|+.|+|++| ++.+ +|..+..++.|+.+++++|.-
T Consensus 834 ~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~-l~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 834 GCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQR-VSLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred CCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCc-cCcccccccCCCeeecCCCcc
Confidence 98655444443 358999999999998 78999999999999999995 5554 566788899999999999853
No 432
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.84 E-value=4e-20 Score=173.52 Aligned_cols=142 Identities=21% Similarity=0.227 Sum_probs=112.5
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh-----------------------HHHHHHHHHHHHHhccCCCcc
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI-----------------------SVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-----------------------~~~~~~~~e~~~l~~l~h~ni 463 (673)
...||+|++|.||+|...+|+.||||++........ .....+..|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467999999999999887899999999876422100 001234678999999999988
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHH-HhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEI-LSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~ 541 (673)
.....+.... .++||||++++++... +.. ..++......++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 6555554432 4899999999865443 332 236778889999999999999999 8 999999999999999
Q ss_pred CCCceEEecccceeecC
Q 005864 542 SEYEARVSDFGIAKFLK 558 (673)
Q Consensus 542 ~~~~~kl~Dfg~~~~~~ 558 (673)
++.++++|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 7899999999998764
No 433
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=1.2e-20 Score=208.07 Aligned_cols=237 Identities=27% Similarity=0.372 Sum_probs=188.2
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
+.++ .+|..+. +.|+.|+|++|.|+ .+|..+. ++|+.|+|++|+++ .+|..+. .+|+.|+|++|++..++.
T Consensus 188 ~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~~LP~ 258 (754)
T PRK15370 188 LGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRITELPE 258 (754)
T ss_pred CCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccCcCCh
Confidence 3455 5677765 58999999999999 4565554 58999999999998 5666553 579999999999997654
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
... .+|+.|+|++|+++.+ +..+. ++|+.|+|++|+++. +|..+. ++|+.|++++|.++ .+|..+. ++
T Consensus 259 ~l~---s~L~~L~Ls~N~L~~L-P~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~s 326 (754)
T PRK15370 259 RLP---SALQSLDLFHNKISCL-PENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETLP--PG 326 (754)
T ss_pred hHh---CCCCEEECcCCccCcc-ccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCcccc--cc
Confidence 432 5799999999999854 44443 589999999999995 555443 47999999999998 4555443 68
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|+.|++++|.++. +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+++. +|..+.. .|+.|++++
T Consensus 327 L~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~~--sL~~LdLs~ 397 (754)
T PRK15370 327 LKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LPENLPA--ALQIMQASR 397 (754)
T ss_pred ceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCHhHHH--HHHHHhhcc
Confidence 9999999999994 565553 79999999999998 5776663 689999999999995 5655553 799999999
Q ss_pred CcCCCCCcccc----cCCCcccEEEecCcccc
Q 005864 242 NFLGGEIPPQI----CNLESLEKLNVSHNNLS 269 (673)
Q Consensus 242 N~l~~~~~~~~----~~l~~L~~L~l~~N~l~ 269 (673)
|++. .+|..+ ..++++..|++.+|+++
T Consensus 398 N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 398 NNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 9998 556543 44588999999999997
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=5.6e-20 Score=168.49 Aligned_cols=187 Identities=10% Similarity=0.016 Sum_probs=138.8
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh-HHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEe
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI-SVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 481 (673)
+.++..|++|+||+||.+.. .+.+++.+.+........ -....+.+|+++|+++. |+++++++++ +..+++||
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred cccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 34678899999999998866 678888777654322111 11235889999999995 5889999886 34689999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC-CCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI-SSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|++|.+|.+.... . ...++.|+++++.++|+. ||+|||| ||+||+++.++.++|+|||++....+.
T Consensus 79 yI~G~~L~~~~~~----~------~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 79 YLAGAAMYQRPPR----G------DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred eecCccHHhhhhh----h------hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 9999998754321 0 134678999999999999 9999999 799999999999999999999865443
Q ss_pred CCC-----c--------eecccccccccccccccC-CcC-cchhHHHHHHHHHHHHhCCCCCc
Q 005864 561 SSN-----W--------TEFAGTFGYVAPELAYTM-KVT-EKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 561 ~~~-----~--------~~~~~~~~y~aPE~~~~~-~~~-~~~Dv~slG~il~el~~g~~p~~ 608 (673)
... . .....++.|++|+...-. ..+ ...+.++-|.-+|.++||..|..
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 321 0 011246677777653221 222 46788999999999999999853
No 435
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.83 E-value=2.1e-22 Score=213.14 Aligned_cols=269 Identities=26% Similarity=0.285 Sum_probs=206.5
Q ss_pred CCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 15 FTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 15 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
.++|+.|+.+.|.++...+ .+ .-.+|++++++.|+++ .+|+.+..+.+|+.|+..+|++..++ .....+.+|++|.
T Consensus 218 g~~l~~L~a~~n~l~~~~~-~p-~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~~lp-~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTLDV-HP-VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLVALP-LRISRITSLVSLS 293 (1081)
T ss_pred CcchheeeeccCcceeecc-cc-ccccceeeecchhhhh-cchHHHHhcccceEecccchhHHhhH-HHHhhhhhHHHHH
Confidence 4678889999998884333 22 3368999999999998 56688999999999999999997544 4555678899999
Q ss_pred ccCCccccccccCccccCCCcEEEcccCccCccCChh-hhcccc-ccccccccccccccCCccccCCCCCCEEEccCccc
Q 005864 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPE-IGKLYQ-LHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172 (673)
Q Consensus 95 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~-L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l 172 (673)
+.+|.+. -.+....+++.|++|+|..|+|.. .|+. +.-+.. |+.|+.+.|++....-..-..++.|+.|++.+|.+
T Consensus 294 ~~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 294 AAYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred hhhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcc
Confidence 9999987 445666778899999999999984 4443 333333 77788888887633222223356888888999998
Q ss_pred cccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccc
Q 005864 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI 252 (673)
Q Consensus 173 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 252 (673)
++..-..+.++++|+.|+|++|++.......+.++..|+.|+||+|+++. +|..+..+..|++|...+|.+. ..| .+
T Consensus 372 td~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~-~fP-e~ 448 (1081)
T KOG0618|consen 372 TDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLL-SFP-EL 448 (1081)
T ss_pred cccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCcee-ech-hh
Confidence 87766778888889999999998875545567888888899999998884 6788888888999999888887 677 78
Q ss_pred cCCCcccEEEecCccccccCccccccCCCccEEEccCccc
Q 005864 253 CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292 (673)
Q Consensus 253 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l 292 (673)
..++.|+.+|+|.|+|+...-......++|++|||+||..
T Consensus 449 ~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 449 AQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 8888999999999988866444444458889999999874
No 436
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.83 E-value=5.5e-22 Score=203.91 Aligned_cols=273 Identities=23% Similarity=0.256 Sum_probs=186.5
Q ss_pred EEEeeCCccc-cCCCccccCCCCCCEEEcccCccccc----cCccccCCCCCcEEEccCccccc------ccccccCCCC
Q 005864 20 GLYLYSNSLS-GSVPGEIGNLMQLTNLEIDNNQLFGQ----IPRSLRNLASLNRVHLEQNHLTG------NISEVFGIYP 88 (673)
Q Consensus 20 ~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~L~~n~i~~------~~~~~~~~l~ 88 (673)
.|+|+++.++ ......|..+.+|+.|++++|.++.. ++..+...++|++|+++++.+.. ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776 34445566777788888888887532 44556677778888888887762 2234566778
Q ss_pred CccEEEccCCccccccccCccccCC---CcEEEcccCccCc----cCChhhhcc-ccccccccccccccc----cCCccc
Q 005864 89 NLTFLDISHNNFYGEIWSSWGKCQQ---LGTLNFSMNNITG----SIPPEIGKL-YQLHKLDFSLNQIVG----EIPIEL 156 (673)
Q Consensus 89 ~L~~L~L~~n~i~~~~~~~~~~l~~---L~~L~L~~n~l~~----~~~~~l~~l-~~L~~L~l~~n~i~~----~~~~~l 156 (673)
+|++|+|++|.+....+..+..+.+ |++|++++|+++. .+...+..+ ++|++|++++|.+++ ..+..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888886555555555554 8888888888773 223344555 788888888888763 233445
Q ss_pred cCCCCCCEEEccCcccccc----CCccccCCCCCCEEEeCCCCCCCcC----CccccccccccEEEccCCcCccCCchhh
Q 005864 157 GNLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSI----PETLGNLLKVHYLNLSNNQFRKEFPVEL 228 (673)
Q Consensus 157 ~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 228 (673)
..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 6667888888888888742 2334555678888888888876432 3345567788888888888876434333
Q ss_pred hc-----ccCCCeEeecCCcCCCC----CcccccCCCcccEEEecCcccccc----CccccccC-CCccEEEccCccc
Q 005864 229 EK-----LVQLSELDLSHNFLGGE----IPPQICNLESLEKLNVSHNNLSGL----IPSCFEGM-HGLSCIDISYNEL 292 (673)
Q Consensus 229 ~~-----l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~~-~~L~~l~l~~N~l 292 (673)
.. .+.|+.|++++|.+++. +...+..+++|+.+++++|.++.. ....+... +.|+++++.+|++
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 32 26888888888888632 234455667888888888888755 33444445 6788888888764
No 437
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.83 E-value=2e-20 Score=192.59 Aligned_cols=209 Identities=26% Similarity=0.490 Sum_probs=159.2
Q ss_pred HhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCe-EEecC
Q 005864 455 LTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI-VHRDI 533 (673)
Q Consensus 455 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~dl 533 (673)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.|.+.... ..++|.......++++.||+|+|.. +| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 456899999999999999999999999999999999998743 5689999999999999999999988 55 89999
Q ss_pred CCCCeEeCCCCceEEecccceeecCCC--CCCceecccccccccccccccCC-------cCcchhHHHHHHHHHHHHhCC
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLKPG--SSNWTEFAGTFGYVAPELAYTMK-------VTEKCDVYSFGVLALEVIKGK 604 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~-------~~~~~Dv~slG~il~el~~g~ 604 (673)
+++|.+++..+.+|++|||+....... ...........-|.|||.+.... .+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998876421 11112223446799999987642 466799999999999999999
Q ss_pred CCCcccccccccccccccccccccC-CCCCCCCcc--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 605 HPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRN--IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 605 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.||+........ .+....+.+ ..-+..+.. ..+...++..++..||..+|.+||++++|-..++
T Consensus 156 ~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 156 GPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred CccccccccCCh----HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 999854332221 111111111 111111111 1133446899999999999999999999987664
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.7e-19 Score=173.89 Aligned_cols=193 Identities=22% Similarity=0.300 Sum_probs=136.3
Q ss_pred CCCcccceeeeeecC---------------------------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHH
Q 005864 459 RHRNIVKFYGFCSHP---------------------------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511 (673)
Q Consensus 459 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 511 (673)
+|||||++.++|.+. ...|+||..++. +|++++..+. .+...+.-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 599999999877432 235899988876 9999997653 44556667889
Q ss_pred HHHHHHHHHhhcCCCCeEEecCCCCCeEe--CCCC--ceEEecccceeecCCC------CCCceeccccccccccccccc
Q 005864 512 SVANALSYMHHDCFPPIVHRDISSKNVLL--SSEY--EARVSDFGIAKFLKPG------SSNWTEFAGTFGYVAPELAYT 581 (673)
Q Consensus 512 ~i~~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~--~~kl~Dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~ 581 (673)
|+++|+.|||.+ ||.|||+|+.||++ ++|+ ..+|+|||.+---+.- ....-...|.-.-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999999 3443 4789999988533221 111123457778999998765
Q ss_pred CC------cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccc
Q 005864 582 MK------VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLE 655 (673)
Q Consensus 582 ~~------~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 655 (673)
.+ -..|+|.|+.|.+.||+++...||..-...-- .....-...++..+ ...+..+.+++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-------~~r~Yqe~qLPalp---~~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-------DTRTYQESQLPALP---SRVPPVARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee-------chhhhhhhhCCCCc---ccCChHHHHHHHHHhc
Confidence 43 23489999999999999999999874211100 00111112222211 2334458889999999
Q ss_pred CCCCCCCCHHHHHH
Q 005864 656 ESPESRPTMQTVCQ 669 (673)
Q Consensus 656 ~dp~~Rps~~~v~~ 669 (673)
+||++|++..-...
T Consensus 496 r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 496 RDPSKRVSPNIAAN 509 (598)
T ss_pred CCccccCCccHHHh
Confidence 99999998765443
No 439
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80 E-value=6.8e-21 Score=195.49 Aligned_cols=227 Identities=25% Similarity=0.306 Sum_probs=182.2
Q ss_pred eeccCCcEEEEEEE----eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEecc
Q 005864 409 CIGIGGQASVYRGE----LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 409 ~ig~G~~g~vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
.+|+|.||.|+.++ ...|.-+|.|..++......... ....|..++..++ ||.+|++.-.++.+...+++.+|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 37999999999873 33577899998877654433323 6677888999996 999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
.+|.+...+.... .++..........+|-+++++|+. +++|||+|++||+++.+|.+++.|||+++..-....
T Consensus 80 rgg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 80 RGGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred ccchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 9999998887653 366666677788899999999999 999999999999999999999999999986533222
Q ss_pred ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 564 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
.+||..|||||++. .....+|.||||++.+||+||..||.. +....++...+..| ....
T Consensus 153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~~~~p----~~l~ 211 (612)
T KOG0603|consen 153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAELEMP----RELS 211 (612)
T ss_pred ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhccCCc----hhhh
Confidence 27899999999987 678899999999999999999999873 22333444444444 3444
Q ss_pred HHHHHHHHHcccCCCCCCCCH
Q 005864 644 ISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.+++..+...+|..|.-.
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhcc
Confidence 557788888888899888644
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=5.8e-21 Score=196.33 Aligned_cols=263 Identities=23% Similarity=0.265 Sum_probs=200.9
Q ss_pred ccCCCcccCCCCCCEEEeeCCccccC----CCccccCCCCCCEEEcccCcccc------ccCccccCCCCCcEEEccCcc
Q 005864 6 GAIPPSVGNFTNLKGLYLYSNSLSGS----VPGEIGNLMQLTNLEIDNNQLFG------QIPRSLRNLASLNRVHLEQNH 75 (673)
Q Consensus 6 ~~~p~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~------~~~~~l~~l~~L~~L~L~~n~ 75 (673)
+..+..+..+..|+.|+|+++.++.. ++..+...++|+.|+++++.+.. ..+..+..+++|+.|++++|.
T Consensus 13 ~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~ 92 (319)
T cd00116 13 ERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNA 92 (319)
T ss_pred cchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCC
Confidence 34455667788899999999999643 45557788889999999998862 234567889999999999999
Q ss_pred cccccccccCCCCC---ccEEEccCCccccc----cccCcccc-CCCcEEEcccCccCcc----CChhhhcccccccccc
Q 005864 76 LTGNISEVFGIYPN---LTFLDISHNNFYGE----IWSSWGKC-QQLGTLNFSMNNITGS----IPPEIGKLYQLHKLDF 143 (673)
Q Consensus 76 i~~~~~~~~~~l~~---L~~L~L~~n~i~~~----~~~~~~~l-~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l 143 (673)
+....+..+..+.+ |++|++++|.++.. ....+..+ ++|+.|++++|.+++. .+..+..+.+|++|++
T Consensus 93 ~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l 172 (319)
T cd00116 93 LGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNL 172 (319)
T ss_pred CChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEEC
Confidence 98655555555554 99999999998742 22345566 8999999999999843 3445667789999999
Q ss_pred cccccccc----CCccccCCCCCCEEEccCcccccc----CCccccCCCCCCEEEeCCCCCCCcCCccccc-----cccc
Q 005864 144 SLNQIVGE----IPIELGNLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSIPETLGN-----LLKV 210 (673)
Q Consensus 144 ~~n~i~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-----l~~L 210 (673)
++|.+++. ++..+..+++|+.|++++|.+++. +...+..+++|++|++++|.+++.....+.. .+.|
T Consensus 173 ~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L 252 (319)
T cd00116 173 ANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISL 252 (319)
T ss_pred cCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCc
Confidence 99998742 334456668999999999998743 3345677899999999999998643333332 3799
Q ss_pred cEEEccCCcCccC----CchhhhcccCCCeEeecCCcCCCC----CcccccCC-CcccEEEecCccc
Q 005864 211 HYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLGGE----IPPQICNL-ESLEKLNVSHNNL 268 (673)
Q Consensus 211 ~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~l-~~L~~L~l~~N~l 268 (673)
++|++++|.++.. ....+..+++|+.+++++|.+... ....+... +.|+.|++.+|++
T Consensus 253 ~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 253 LTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred eEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 9999999999732 344566778999999999999965 33445555 7899999998864
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=2.8e-18 Score=161.22 Aligned_cols=136 Identities=16% Similarity=0.189 Sum_probs=104.2
Q ss_pred CccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-----CCCcccceeeeeecCC---e-
Q 005864 405 DAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-----RHRNIVKFYGFCSHPR---H- 475 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~- 475 (673)
.-.+.||+|+||.||. +++....+||++..... ...+.+.+|+.++..+ +||||++++|++.++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 3457899999999996 54333336888765322 2356789999999999 5799999999998763 3
Q ss_pred eeEEEec--ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHH-HHHhhcCCCCeEEecCCCCCeEeCC----CCceEE
Q 005864 476 SFLVYEC--LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL-SYMHHDCFPPIVHRDISSKNVLLSS----EYEARV 548 (673)
Q Consensus 476 ~~lv~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~dlk~~Nill~~----~~~~kl 548 (673)
..+|+|| +++|+|.+++.... +++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.++|
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEE
Confidence 3378999 56899999997632 4444 35677788777 999999 9999999999999974 347999
Q ss_pred ecccce
Q 005864 549 SDFGIA 554 (673)
Q Consensus 549 ~Dfg~~ 554 (673)
+||+-+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 994433
No 442
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.6e-18 Score=190.95 Aligned_cols=199 Identities=20% Similarity=0.188 Sum_probs=162.8
Q ss_pred HHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC---CCcccceeeeeec
Q 005864 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR---HRNIVKFYGFCSH 472 (673)
Q Consensus 396 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 472 (673)
+.......|.+.+.+|+|+||+||+|...+|+.||+|.-+.....+.- --.+++.+|+ -+.|.++..++.-
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfY------I~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFY------ICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeee------ehHHHHHhhchhhhcchHHHHHHHcc
Confidence 334445678888999999999999998888999999997766554322 2233444444 3456666666677
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-------CCc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-------EYE 545 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-------~~~ 545 (673)
.+.-++|+||.+.|||.+++... +..+|.....+..|+++-+++||.. +|||+||||+|+++.. ..-
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~~---~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINTN---KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred CCcceeeeeccccccHHHhhccC---CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccc
Confidence 78889999999999999999843 5689999999999999999999999 9999999999999952 235
Q ss_pred eEEecccceeecCC--CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 005864 546 ARVSDFGIAKFLKP--GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 606 (673)
++|+|||.+-.+.. +.......++|-.+-++|...+.+.+.+.|-|.++.+++-|+.|+.-
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 89999999976643 33455677889999999999999999999999999999999999864
No 443
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=3.4e-19 Score=179.59 Aligned_cols=174 Identities=25% Similarity=0.399 Sum_probs=137.5
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++.|++|...+|.+|+.........++.....++.|++.|++| + +.+|+|+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 568999999999999999877666778899999999999999999 6 8899999999999999999999999999
Q ss_pred eecCCCC------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 555 KFLKPGS------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 555 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
..+.... ...+...||..||+||.+.+..|+.|+||||+|++++|++. =..+++.. ....++
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-----------~t~~d~ 472 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-----------ATLTDI 472 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-----------Hhhhhh
Confidence 8775544 13355679999999999999999999999999999999997 33333322 223333
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
-+..++. ....+.+ .-+.++.+++.+.|.+||++.++.
T Consensus 473 r~g~ip~--~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 473 RDGIIPP--EFLQDYP-EEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hcCCCCh--HHhhcCc-HHHHHHHHhcCCCcccCchHHHHh
Confidence 4444441 1222222 234688999999999999665543
No 444
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=8.5e-18 Score=162.32 Aligned_cols=146 Identities=21% Similarity=0.210 Sum_probs=112.7
Q ss_pred cCCCccceeccCCcEEEEEEE--eCCCCEEEEEeeccchhhh---------------------hHHHHHHHHHHHHHhcc
Q 005864 402 KNFDAEQCIGIGGQASVYRGE--LPSGEVVAVKKFHSLLLSE---------------------ISVQREFLNEIKALTEI 458 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~--~~~~~~vavK~~~~~~~~~---------------------~~~~~~~~~e~~~l~~l 458 (673)
.-|++.+.||+|+||.||+|. ..+|+.||+|+++...... ......+..|+..+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358889999999999999998 5689999999987542110 00123467899999999
Q ss_pred CCCc--ccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC-eEEecCCC
Q 005864 459 RHRN--IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP-IVHRDISS 535 (673)
Q Consensus 459 ~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk~ 535 (673)
.+.. +.+++++ ...++||||++++++....... ..+...+...++.|++.++++||+. + ++||||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 7533 3344443 2358999999998887765332 2345566778999999999999999 8 99999999
Q ss_pred CCeEeCCCCceEEecccceeecC
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+||+++ ++.++++|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 7899999999987543
No 445
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.75 E-value=1e-17 Score=158.77 Aligned_cols=148 Identities=18% Similarity=0.173 Sum_probs=114.8
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh-------------------HHHHHHHHHHHHH
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI-------------------SVQREFLNEIKAL 455 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l 455 (673)
.++.+....|.+.+.||+|+||.||+|..++|+.||||++........ .....+..|...+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 455555556888999999999999999888999999998764321100 1122367789999
Q ss_pred hccCCC--cccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC
Q 005864 456 TEIRHR--NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533 (673)
Q Consensus 456 ~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 533 (673)
..+.|+ .+.+.++. ...++||||+++++|.+.... .....++.+++.++.++|+. +++||||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 999877 44444442 345899999999998775431 23456888999999999998 9999999
Q ss_pred CCCCeEeCCCCceEEecccceeecC
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+|+||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996544
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=1.6e-17 Score=159.49 Aligned_cols=137 Identities=20% Similarity=0.353 Sum_probs=115.8
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+.||+|++|.||+|.. .|..|++|+....... .......+.+|+.++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 7788999976543211 112235688899999999999998888888777888999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|++|.+++.... + .+..++.+++.++.++|+. +++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986532 1 7788999999999999999 999999999999999 78899999999864
No 447
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=8e-20 Score=156.06 Aligned_cols=158 Identities=34% Similarity=0.511 Sum_probs=98.4
Q ss_pred ccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCC
Q 005864 108 WGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELE 187 (673)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 187 (673)
+.++.+.+.|.|++|+++ ..|..+..+.+|+.|++++|+|+ .+|..++.++.|+.|+++-|++. ..|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 334556666667777766 45556666666666777766666 56666666666666666666666 6666666666666
Q ss_pred EEEeCCCCCCC-cCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCc
Q 005864 188 YLDLSTNKLSG-SIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHN 266 (673)
Q Consensus 188 ~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N 266 (673)
.|||+.|++.. .+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+.+|.+. ..|..++.+..|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 66666666632 45556666666666666666665 45556666666666666666655 55555555555555555555
Q ss_pred cccc
Q 005864 267 NLSG 270 (673)
Q Consensus 267 ~l~~ 270 (673)
+++-
T Consensus 184 rl~v 187 (264)
T KOG0617|consen 184 RLTV 187 (264)
T ss_pred eeee
Confidence 5553
No 448
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=1.8e-19 Score=153.94 Aligned_cols=167 Identities=26% Similarity=0.452 Sum_probs=150.5
Q ss_pred hhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccc
Q 005864 131 EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV 210 (673)
Q Consensus 131 ~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 210 (673)
.+..+.+++.|.||+|+++ .+|..++++.+|+.|++.+|+++ .+|..++.+++|+.|+++-|++. ..|..|+.+|.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4556788899999999998 77888999999999999999999 77888999999999999999998 899999999999
Q ss_pred cEEEccCCcCcc-CCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccC
Q 005864 211 HYLNLSNNQFRK-EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289 (673)
Q Consensus 211 ~~L~l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~ 289 (673)
+.|+|++|++.. ..|..|..+..|+.|+|++|.+. .+|..++.+.+|+.|.+.+|.+-.. |..+..+..|++|++.|
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~l-pkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSL-PKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhC-cHHHHHHHHHHHHhccc
Confidence 999999999874 57888989999999999999998 8999999999999999999998754 88899999999999999
Q ss_pred ccccCCCCCCccc
Q 005864 290 NELLGLIPNSTGF 302 (673)
Q Consensus 290 N~l~~~~~~~~~~ 302 (673)
|+++-.+|.....
T Consensus 183 nrl~vlppel~~l 195 (264)
T KOG0617|consen 183 NRLTVLPPELANL 195 (264)
T ss_pred ceeeecChhhhhh
Confidence 9999888875443
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=4.8e-17 Score=154.60 Aligned_cols=134 Identities=20% Similarity=0.362 Sum_probs=110.0
Q ss_pred eeccCCcEEEEEEEeCCCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 409 CIGIGGQASVYRGELPSGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
.||+|+||.||+|.+ +|..|++|........ ......++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 6788999986542211 1223466889999999999988776666666777789999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|++|.+++.... . .++.++++++.++|+. +++|+|++|.||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999999875431 0 6889999999999999 999999999999999 789999999998753
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=4.7e-17 Score=177.75 Aligned_cols=142 Identities=20% Similarity=0.333 Sum_probs=114.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCCCCEEEEEe-eccchh----hhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKK-FHSLLL----SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~-~~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
....|...+.||+|+||+||+|.+.... +++|+ ..+... ......+.+.+|++++..++|++++....++..+.
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3445567899999999999999875444 34443 222111 11223467889999999999999999888888877
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++++|.+++. ....++.++++++.|||+. +++|||+||+||++ +++.++|+|||++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 8899999999999999875 3467899999999999999 99999999999999 5779999999999
Q ss_pred eec
Q 005864 555 KFL 557 (673)
Q Consensus 555 ~~~ 557 (673)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=1.9e-17 Score=178.61 Aligned_cols=206 Identities=23% Similarity=0.303 Sum_probs=144.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|+.++.|..|+||.||..+++ ..+++|.|+ .+... +.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l--------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL--------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccch--------hhhc--cccccCCccee----------------
Confidence 57889999999999999999886 477888854 22111 1111 33333455444
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+-...++..+. ++. +++.+++|+|+. +|+|||+||.|.+++.-|.+|+.|||+++..-..
T Consensus 136 -----gDc~tllk~~g~---lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGP---LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -----chhhhhcccCCC---Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 444444544332 222 237899999999 9999999999999999999999999998743111
Q ss_pred CC---------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 561 SS---------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 561 ~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
.. .....+||+.|+|||++....|+..+|.|++|+|+||.+.|..||..... ++.+.
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp--------eelfg 268 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFG 268 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH--------HHHHh
Confidence 00 12346799999999999999999999999999999999999999874321 22222
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
.++.....++.. ....+.+..+++...|+.+|..|-
T Consensus 269 ~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 269 QVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 222222222221 223345688999999999999995
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.65 E-value=6.8e-16 Score=145.12 Aligned_cols=139 Identities=21% Similarity=0.215 Sum_probs=99.4
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHH---------------------HHHHHHHHhccCCCc--c
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQRE---------------------FLNEIKALTEIRHRN--I 463 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~---------------------~~~e~~~l~~l~h~n--i 463 (673)
.+.||+|+||+||+|...+|+.||||++............. ...|...+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988889999999886542221111111 135566666664432 3
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHH-HhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEI-LSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~ 541 (673)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. . +++|+||+|+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444443 235899999999654321 11111 01 5567899999999999999 7 999999999999999
Q ss_pred CCCceEEecccceeecC
Q 005864 542 SEYEARVSDFGIAKFLK 558 (673)
Q Consensus 542 ~~~~~kl~Dfg~~~~~~ 558 (673)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999997554
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=1.4e-15 Score=137.89 Aligned_cols=135 Identities=19% Similarity=0.173 Sum_probs=113.6
Q ss_pred ccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC--CcccceeeeeecCCeeeEEEecc
Q 005864 406 AEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH--RNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+++.||+|.++.||++...+ +.+++|....... ...+.+|+..+..++| +++++++++...++..++++||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 45789999999999998854 7899998765422 4578889999999976 58999999988888899999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
+++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99777654 4456677889999999999986444799999999999999989999999999864
No 454
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.61 E-value=5.2e-15 Score=143.32 Aligned_cols=139 Identities=14% Similarity=0.224 Sum_probs=107.6
Q ss_pred cceec-cCCcEEEEEEEeCCCCEEEEEeeccchh----------hhhHHHHHHHHHHHHHhccCCCcc--cceeeeeecC
Q 005864 407 EQCIG-IGGQASVYRGELPSGEVVAVKKFHSLLL----------SEISVQREFLNEIKALTEIRHRNI--VKFYGFCSHP 473 (673)
Q Consensus 407 ~~~ig-~G~~g~vy~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~ 473 (673)
...|| .|+.|+||.+... +..++||++..... ........+.+|++++..++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 9999999999884 78899998854211 011234568889999999998875 6777765432
Q ss_pred C----eeeEEEecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 474 R----HSFLVYECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 474 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
. ..++|+|+++| .+|.+++... .++.. .+.+++.++.+||+. ||+||||||.||+++.++.+++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6999988653 23332 356899999999999 9999999999999999889999
Q ss_pred ecccceeec
Q 005864 549 SDFGIAKFL 557 (673)
Q Consensus 549 ~Dfg~~~~~ 557 (673)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999998753
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=2.2e-16 Score=171.22 Aligned_cols=254 Identities=20% Similarity=0.266 Sum_probs=189.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 478 (673)
..|.+.+.||+|.|+.|-.+... ....+|+|.+.... ...........|..+-..+. |+|++++++...+.+..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45778888999999999888553 34456777665443 23344556666888877785 9999999999999999999
Q ss_pred EEecccCCChHHHH-hcCCCCccchHHHHHHHHHHHHHHHHHHh-hcCCCCeEEecCCCCCeEeCCCC-ceEEeccccee
Q 005864 479 VYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~ 555 (673)
+.+|.+++++.+.+ +... ...+......++.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||+|.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999999988 4432 23455666778999999999999 77 999999999999999999 99999999998
Q ss_pred ecCC-CCC--Cceeccc-ccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC
Q 005864 556 FLKP-GSS--NWTEFAG-TFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 556 ~~~~-~~~--~~~~~~~-~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
.+.. ... ......| ++.|+|||...+. -..+..|+||.|+++..+++|..|++....... ........
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-------~~~~~~~~ 246 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-------RYSSWKSN 246 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-------cceeeccc
Confidence 7755 222 2344567 9999999998874 446789999999999999999999875433221 11111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
+...-...+........++..+++..+|..|.+.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 11101112233334577888899999999999988764
No 456
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.50 E-value=1.3e-13 Score=145.34 Aligned_cols=149 Identities=21% Similarity=0.278 Sum_probs=104.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhH-------------------------------------H
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEIS-------------------------------------V 444 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~ 444 (673)
..|+ .+.||+|++|.||+|++++|+.||||+.+........ .
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 3689999999999999999999999998654211100 0
Q ss_pred HHHHHHHHHHHhccC-----CCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHH-HHH
Q 005864 445 QREFLNEIKALTEIR-----HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN-ALS 518 (673)
Q Consensus 445 ~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~ 518 (673)
.-+|..|+..+.+++ ++++.-..-|....+..++||||++|++|.++...... .. .+..++..+++ .+.
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLN 271 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHH
Confidence 012555666666653 33332222222334457999999999999988653211 11 23456666666 467
Q ss_pred HHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 519 ~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
.+|.. |++|+|++|.||+++++++++++|||++..+.+
T Consensus 272 ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 272 QVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 88988 999999999999999999999999999987753
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.49 E-value=3e-15 Score=151.35 Aligned_cols=173 Identities=34% Similarity=0.512 Sum_probs=96.3
Q ss_pred cEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCC
Q 005864 115 GTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTN 194 (673)
Q Consensus 115 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 194 (673)
...+|+.|++. .+|..+..+-.|+.+.|+.|.+. .+|..++++..|++|+|+.|+++ .+|..++.++ |+.|.+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 34555555555 45555555555555555555554 55555555555555555555555 4555555554 555555555
Q ss_pred CCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCcc
Q 005864 195 KLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS 274 (673)
Q Consensus 195 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 274 (673)
+++ .+|..++..+.|..|+.+.|.+.. +|..++.+.+|+.|++..|++. .+|..++.+ .|..||+|.|+++.+ |-
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~s-lpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~i-Pv 228 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQS-LPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISYL-PV 228 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhhh-chHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceeec-ch
Confidence 555 555555555555555666555552 4455555555566666666555 445455533 455556666655533 55
Q ss_pred ccccCCCccEEEccCccccCCC
Q 005864 275 CFEGMHGLSCIDISYNELLGLI 296 (673)
Q Consensus 275 ~~~~~~~L~~l~l~~N~l~~~~ 296 (673)
.|..|..|++|-|.+|+|+..+
T Consensus 229 ~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hhhhhhhheeeeeccCCCCCCh
Confidence 5556666666666666655443
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=2.1e-13 Score=150.63 Aligned_cols=118 Identities=31% Similarity=0.540 Sum_probs=102.2
Q ss_pred cccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEcc
Q 005864 209 KVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288 (673)
Q Consensus 209 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~ 288 (673)
.++.|+|++|.+++.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCccc--ccCccccccCCcCCCCCCCCCcccc
Q 005864 289 YNELLGLIPNSTGF--QYDPIQALRGNRGLCGDVEGFQSCK 327 (673)
Q Consensus 289 ~N~l~~~~~~~~~~--~~~~~~~~~~n~~~c~~~~~~~~~~ 327 (673)
+|+++|.+|..... .......+.+|+.+|+.+ ....|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p-~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP-GLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC-CCCCCc
Confidence 99999999875432 223356788999999865 345675
No 459
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.2e-13 Score=142.85 Aligned_cols=248 Identities=25% Similarity=0.273 Sum_probs=184.8
Q ss_pred CCCccceecc--CCcEEEEEEEe---CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGI--GGQASVYRGEL---PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~--G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 476 (673)
.|.....+|. |.+|.||.+.. .++..+|+|+-+....... ....=.+|+.....++ |++.++.+..+...+..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~-~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPL-DSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcc-ccccccchhhcccccCccccccccCcccccCCcc
Confidence 4566788999 99999999965 4688999998654433221 2233346777777774 99999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHH----HHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecc
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN----ALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDF 551 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Df 551 (673)
++-+|++. .+|.++.+... ..++....+.+..+..+ |+.++|.. +++|-|+||.||+..++ ...+++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 99999886 58888877653 34666777888888888 99999999 99999999999999999 88999999
Q ss_pred cceeecCCCCCCce-----ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccc
Q 005864 552 GIAKFLKPGSSNWT-----EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 552 g~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
|+...+..+.-... ...+...|++||...+ -++..+|+|++|.++.+-.++..+...-. ...|.+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~---------~~~W~~ 337 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK---------NSSWSQ 337 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC---------CCCccc
Confidence 99998866542221 2257788999998644 57889999999999999999887744210 001111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+++.+ .+.++......++...+..+++.+|-.|++.+.+..
T Consensus 338 -~r~~~-ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 -LRQGY-IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -ccccc-CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111 222333334445666899999999999999988764
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=2.4e-13 Score=128.87 Aligned_cols=202 Identities=21% Similarity=0.306 Sum_probs=138.5
Q ss_pred HHHHhccCCCcccceeeeeecCC-----eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCC
Q 005864 452 IKALTEIRHRNIVKFYGFCSHPR-----HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCF 525 (673)
Q Consensus 452 ~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 525 (673)
..-+-++.|-|+|+++.|+.+.. ...+++|||..|++.++|++.+ ....+....-.+|+.||..||.|||+. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 44555667999999999996543 4678999999999999998643 234566677778999999999999985 5
Q ss_pred CCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC----CceecccccccccccccccCCcCcchhHHHHHHHHHHHH
Q 005864 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601 (673)
Q Consensus 526 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 601 (673)
|+|+|+++.-+-|++..++-+|++--.-......-.. ......+-++|.|||+=.....+.++|||+||....||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 7999999999999999998888753211111000000 011233568999999877777888999999999999999
Q ss_pred hCCCCC-cccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 602 KGKHPR-DFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 602 ~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..-- ...+.. ..++.....+..--.. . =..++.+|++..|..||+|++++.
T Consensus 277 ilEiq~tnseS~~-----~~ee~ia~~i~~len~----l------qr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESKV-----EVEENIANVIIGLENG----L------QRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCccee-----ehhhhhhhheeeccCc----c------ccCcCcccccCCCCCCcchhhhhc
Confidence 876541 111110 0111111111111010 0 124678999999999999998763
No 461
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42 E-value=2.2e-12 Score=137.33 Aligned_cols=147 Identities=19% Similarity=0.248 Sum_probs=96.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhh---------------------------h----HHHH--
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSE---------------------------I----SVQR-- 446 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~---------------------------~----~~~~-- 446 (673)
...|+. +.||+|++|.||+|++++ |+.||||+.++..... . +..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 789999999999999987 9999999997542110 0 1111
Q ss_pred ----HHHHHHHHHhccC----CCcccceeeeee-cCCeeeEEEecccCCChHHH--HhcCC-CCccchHHHHHHHHHHHH
Q 005864 447 ----EFLNEIKALTEIR----HRNIVKFYGFCS-HPRHSFLVYECLERGSLAEI--LSNDG-SIKEFSWIVRTNVIKSVA 514 (673)
Q Consensus 447 ----~~~~e~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~--l~~~~-~~~~l~~~~~~~i~~~i~ 514 (673)
+|.+|+..+.+++ +...+.+-.++. .....++||||++|+.+.++ +...+ ....+.......++.|+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 2344554444442 333333222222 23456899999999999875 33222 111233333333444443
Q ss_pred HHHHHHhhcCCCCeEEecCCCCCeEeCCCC----ceEEecccceeecC
Q 005864 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEY----EARVSDFGIAKFLK 558 (673)
Q Consensus 515 ~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~~~~ 558 (673)
.. |++|+|++|.||+++.++ +++++|||++..+.
T Consensus 278 -------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 -------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 45 999999999999999888 99999999998764
No 462
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.42 E-value=1.1e-14 Score=147.29 Aligned_cols=213 Identities=30% Similarity=0.398 Sum_probs=166.7
Q ss_pred EEccCccccccccccc-CCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccc
Q 005864 69 VHLEQNHLTGNISEVF-GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQ 147 (673)
Q Consensus 69 L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 147 (673)
|.|++-++..-+...+ -.+..-...||+.|++. ..+..++.+..|+.+.|..|.+. .+|.++.++..|+.|||+.|+
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccch
Confidence 3444444443333333 23445567888899887 56777788888999999999988 788899999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchh
Q 005864 148 IVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE 227 (673)
Q Consensus 148 i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 227 (673)
+. ..|..++.|+ |+.|-+++|+++ .+|+.++.++.|..|+.+.|.+. .+|..+..+.+|+.|++..|++.. .|..
T Consensus 133 lS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~E 207 (722)
T KOG0532|consen 133 LS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEE 207 (722)
T ss_pred hh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHH
Confidence 97 7888888775 889999999999 77888888889999999999998 778888999999999999999984 6667
Q ss_pred hhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCcccccc---CCCccEEEccCcc
Q 005864 228 LEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEG---MHGLSCIDISYNE 291 (673)
Q Consensus 228 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~---~~~L~~l~l~~N~ 291 (673)
+..| .|..||+|.|++. .+|-.|.+|..|++|-|.+|.+... |..+.- ..=.|+|+..-++
T Consensus 208 l~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP-PAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 208 LCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP-PAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred HhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC-hHHHHhccceeeeeeecchhcc
Confidence 7755 7899999999998 8899999999999999999999744 433322 2233566666554
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.41 E-value=3.8e-13 Score=142.22 Aligned_cols=198 Identities=34% Similarity=0.488 Sum_probs=108.9
Q ss_pred EEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCC-CCccEEEccCCccccccccCccccCCCcEEEcccC
Q 005864 44 NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIY-PNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMN 122 (673)
Q Consensus 44 ~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 122 (673)
.|+++.|.+. .....+..++.++.|++.+|.++.+.+ ....+ ++|+.|++++|++..+ +..+..+++|+.|+++.|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~i~~-~~~~~~~nL~~L~l~~N~i~~l-~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPP-LIGLLKSNLKELDLSDNKIESL-PSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccccCcc-ccccchhhcccccccccchhhh-hhhhhccccccccccCCc
Confidence 4555555553 122234444556666666666664432 22333 2566666666666522 244556666666666666
Q ss_pred ccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCc
Q 005864 123 NITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE 202 (673)
Q Consensus 123 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 202 (673)
+++ .++...+.+++|+.|++++|++. .+|.....+..|++|.+++|.+. ..+..+.++.++..+.+.+|++. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 666 34444445566666666666665 44443333444666666666433 33444556666666666666665 3345
Q ss_pred cccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcc
Q 005864 203 TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250 (673)
Q Consensus 203 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 250 (673)
.+..+++++.|++++|.++.... +..+.+++.|++++|.+....+.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 55666666666666666664333 55666666666666666644443
No 464
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.38 E-value=4.6e-14 Score=135.08 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=161.3
Q ss_pred ccCCCCCCEEEcccCcccc----ccCccccCCCCCcEEEccCcccc---cc-------cccccCCCCCccEEEccCCccc
Q 005864 36 IGNLMQLTNLEIDNNQLFG----QIPRSLRNLASLNRVHLEQNHLT---GN-------ISEVFGIYPNLTFLDISHNNFY 101 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~----~~~~~l~~l~~L~~L~L~~n~i~---~~-------~~~~~~~l~~L~~L~L~~n~i~ 101 (673)
+..+..++.|+|++|-+.. .+...+.+.++|+..++++--.+ .. ...++...|+|++||||+|-+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 4456677777777777653 23345566677777777653211 11 1233445566777777777665
Q ss_pred cccccCc----cccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc--
Q 005864 102 GEIWSSW----GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN-- 175 (673)
Q Consensus 102 ~~~~~~~----~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~-- 175 (673)
...+..| .++..|++|.|.+|.+...-...++. .|..|. .|+ ....-+.|+.+...+|++...
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga 174 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGGA 174 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccccH
Confidence 4443332 34556666666666665332222222 222222 111 123447899999999998743
Q ss_pred --CCccccCCCCCCEEEeCCCCCCC----cCCccccccccccEEEccCCcCccC----CchhhhcccCCCeEeecCCcCC
Q 005864 176 --LPRVLGSLSELEYLDLSTNKLSG----SIPETLGNLLKVHYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 176 --~~~~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~ 245 (673)
+...|...+.|+.+.++.|.+.. .+...|..+++|+.|||.+|.++.. ....++.+++|+.|++++|.+.
T Consensus 175 ~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 175 TALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred HHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccc
Confidence 23356677899999999998852 2234677899999999999998754 3445777889999999999998
Q ss_pred CCCccccc-----CCCcccEEEecCcccccc----CccccccCCCccEEEccCcccc
Q 005864 246 GEIPPQIC-----NLESLEKLNVSHNNLSGL----IPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 246 ~~~~~~~~-----~l~~L~~L~l~~N~l~~~----~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
.....+|. ..++|+.|.+.+|.++.. +..+....|.|..|+|++|.+.
T Consensus 255 ~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 255 NEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 76554442 368999999999998743 3345667899999999999874
No 465
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.38 E-value=7e-12 Score=130.84 Aligned_cols=167 Identities=19% Similarity=0.240 Sum_probs=127.4
Q ss_pred EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccc
Q 005864 422 ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEF 501 (673)
Q Consensus 422 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l 501 (673)
+..++.+|.|..++.... .......+.++.++.+|||||+++++.+..++..|+|+|-+. .|..++++.+
T Consensus 33 ~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----- 102 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----- 102 (690)
T ss_pred eeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----
Confidence 334688888887765432 345667788999999999999999999999999999999874 5666666543
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccccccccccccc
Q 005864 502 SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581 (673)
Q Consensus 502 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 581 (673)
.....-.+.||+.||.|||+.| +++|+++.-..|++++.|+.||++|.++..............---.|..|+.+..
T Consensus 103 -~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 103 -KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 3444556789999999999776 8999999999999999999999999998765433222222222335677775432
Q ss_pred CCcCcchhHHHHHHHHHHHHhC
Q 005864 582 MKVTEKCDVYSFGVLALEVIKG 603 (673)
Q Consensus 582 ~~~~~~~Dv~slG~il~el~~g 603 (673)
.. -..|.|.||++++|++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 22 346999999999999998
No 466
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=8.1e-14 Score=136.97 Aligned_cols=209 Identities=22% Similarity=0.243 Sum_probs=111.2
Q ss_pred CCCCCCEEEcccCccccccC-ccccCCCCCcEEEccCcccccc--cccccCCCCCccEEEccCCcccccccc-CccccCC
Q 005864 38 NLMQLTNLEIDNNQLFGQIP-RSLRNLASLNRVHLEQNHLTGN--ISEVFGIYPNLTFLDISHNNFYGEIWS-SWGKCQQ 113 (673)
Q Consensus 38 ~l~~L~~L~L~~n~i~~~~~-~~l~~l~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~~ 113 (673)
++.+|+...|.++.+....- .....|++++.|||+.|-+... .......+|+|+.|+|+.|++...... .-..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 34556666666665542111 2455566666666666655522 223445566666666666665421111 1113456
Q ss_pred CcEEEcccCccCcc-CChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCC-ccccCCCCCCEEEe
Q 005864 114 LGTLNFSMNNITGS-IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP-RVLGSLSELEYLDL 191 (673)
Q Consensus 114 L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l 191 (673)
|+.|.|+.|+++.- +...+..+|+|+.|+|..|............+..|+.|+|++|++-.... .....++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 66666666666621 12233456666666666664322333333445566666777666653221 23455666666666
Q ss_pred CCCCCCCc-CCcc-----ccccccccEEEccCCcCccC-CchhhhcccCCCeEeecCCcCCC
Q 005864 192 STNKLSGS-IPET-----LGNLLKVHYLNLSNNQFRKE-FPVELEKLVQLSELDLSHNFLGG 246 (673)
Q Consensus 192 ~~n~l~~~-~~~~-----l~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ls~N~l~~ 246 (673)
+.+.+.+. .|+. ...+++|++|+++.|+|..- .-..+..+++|+.|.+..|.+..
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 66666532 2222 23456777777777777531 12234445667777777777764
No 467
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.37 E-value=8.2e-13 Score=139.71 Aligned_cols=199 Identities=39% Similarity=0.530 Sum_probs=138.2
Q ss_pred EEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccc-cccccccccccccccCCccccCCCCCCEEEccCc
Q 005864 92 FLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLY-QLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170 (673)
Q Consensus 92 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n 170 (673)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5666666653 12233444567777777777777 4555555553 7888888888776 45556677788888888888
Q ss_pred cccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcc
Q 005864 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250 (673)
Q Consensus 171 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 250 (673)
+++ .++......++|+.|++++|++. .+|........|++|.+++|.+. ..+..+..+.++..+.+.+|++. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 887 44444446777888888888887 55655445556788888888543 35556777777777778888776 4466
Q ss_pred cccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCC
Q 005864 251 QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299 (673)
Q Consensus 251 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~ 299 (673)
.+..+++++.|++++|.++.... +..+.+++.|++++|.+...+|..
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 67777888888888888876644 777888888888888887776653
No 468
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.36 E-value=4.8e-14 Score=134.96 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=141.1
Q ss_pred CcccCCCCCCEEEeeCCccccC----CCccccCCCCCCEEEcccC---ccccccC-------ccccCCCCCcEEEccCcc
Q 005864 10 PSVGNFTNLKGLYLYSNSLSGS----VPGEIGNLMQLTNLEIDNN---QLFGQIP-------RSLRNLASLNRVHLEQNH 75 (673)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n---~i~~~~~-------~~l~~l~~L~~L~L~~n~ 75 (673)
+.+..+..++.|+||+|.+... +.+.+++.++|+..++++- ++...+| .++..+++|++|+||+|-
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 3455678899999999999743 4455778899999999984 2333344 456677899999999999
Q ss_pred cccccc----cccCCCCCccEEEccCCccccccccCcc-------------ccCCCcEEEcccCccCccCChhhhccccc
Q 005864 76 LTGNIS----EVFGIYPNLTFLDISHNNFYGEIWSSWG-------------KCQQLGTLNFSMNNITGSIPPEIGKLYQL 138 (673)
Q Consensus 76 i~~~~~----~~~~~l~~L~~L~L~~n~i~~~~~~~~~-------------~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 138 (673)
++.... ..++.+.+|++|.|.+|.+.......++ .-+.|+++...+|++.......
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~------- 176 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATA------- 176 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHH-------
Confidence 984443 3457789999999999998754433322 2345555555555555321111
Q ss_pred cccccccccccccCCccccCCCCCCEEEccCccccc----cCCccccCCCCCCEEEeCCCCCCC----cCCccccccccc
Q 005864 139 HKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG----NLPRVLGSLSELEYLDLSTNKLSG----SIPETLGNLLKV 210 (673)
Q Consensus 139 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L 210 (673)
+...|...+.|+.+.++.|.|.. .+...|..+++|+.|||..|.++. .+...+..++.|
T Consensus 177 -------------~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L 243 (382)
T KOG1909|consen 177 -------------LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHL 243 (382)
T ss_pred -------------HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchh
Confidence 11223333444444444444431 111234445555555555555532 122334445555
Q ss_pred cEEEccCCcCccCCchhh-----hcccCCCeEeecCCcCCCCC----cccccCCCcccEEEecCcccc
Q 005864 211 HYLNLSNNQFRKEFPVEL-----EKLVQLSELDLSHNFLGGEI----PPQICNLESLEKLNVSHNNLS 269 (673)
Q Consensus 211 ~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 269 (673)
+.|++++|.++......| ...++|+.|.+.+|.++..- .......+.|+.|+|++|++.
T Consensus 244 ~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 244 RELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred eeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 566666655554433332 12456666666666665321 122344677777777777773
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.33 E-value=3.4e-13 Score=126.05 Aligned_cols=133 Identities=24% Similarity=0.304 Sum_probs=78.3
Q ss_pred CCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEe
Q 005864 159 LKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238 (673)
Q Consensus 159 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 238 (673)
...|++|+|++|.|+ .+.+...-.|.++.|++|.|.+. .+ ..++.+++|+.||||+|.++. ...+-..+-++++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeee
Confidence 345566666666665 33334444556666666666665 22 225556666666666666653 223334455666666
Q ss_pred ecCCcCCCCCcccccCCCcccEEEecCccccccC-ccccccCCCccEEEccCccccCCCC
Q 005864 239 LSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLI-PSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 239 ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|+.|.|.+ -..+..+-+|..||+++|+|.... ...++++|.|+++.|.+|++.+.+.
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 66666642 234556666777777777765432 2456777888888888888877653
No 470
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=5.3e-12 Score=116.60 Aligned_cols=131 Identities=19% Similarity=0.145 Sum_probs=96.6
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCccc-ceeeeeecCCeeeEEEecccC
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV-KFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.+.++.|.++.||+++.. |+.|++|....... ....+..|+.++..+.+.+++ +++++.. ...++||||++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence 367899999999999874 78899998754321 123457889999988655544 4544432 345799999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC--CCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC--FPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
.++.+. . .....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~--~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTE--D---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Cccccc--c---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 887653 0 011235678999999999982 12359999999999999 66899999999863
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=3.9e-13 Score=132.22 Aligned_cols=209 Identities=21% Similarity=0.222 Sum_probs=115.8
Q ss_pred cCCCCCCEEEeeCCccccCCC--ccccCCCCCCEEEcccCccccc--cCccccCCCCCcEEEccCcccc-cccccccCCC
Q 005864 13 GNFTNLKGLYLYSNSLSGSVP--GEIGNLMQLTNLEIDNNQLFGQ--IPRSLRNLASLNRVHLEQNHLT-GNISEVFGIY 87 (673)
Q Consensus 13 ~~l~~L~~L~L~~n~i~~~~~--~~~~~l~~L~~L~L~~n~i~~~--~~~~l~~l~~L~~L~L~~n~i~-~~~~~~~~~l 87 (673)
+++++|+.+.|.++.+. ..+ .....|++++.|||+.|-+... +..-...|++|+.|+|+.|++. ......-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 35566666777776666 222 2455667777777777655431 2233455667777777777665 1222222345
Q ss_pred CCccEEEccCCcccccc-ccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccC-CccccCCCCCCEE
Q 005864 88 PNLTFLDISHNNFYGEI-WSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEI-PIELGNLKSLNYL 165 (673)
Q Consensus 88 ~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L 165 (673)
++|+.|.|+.|.++... ......+++|+.|+|..|....+......-++.|++|||++|.+.... ....+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 66777777777665311 122334567777777776433233334445566777777777665221 1345566677777
Q ss_pred EccCcccccc-CCcc-----ccCCCCCCEEEeCCCCCCCc-CCccccccccccEEEccCCcCcc
Q 005864 166 VLNGNKLSGN-LPRV-----LGSLSELEYLDLSTNKLSGS-IPETLGNLLKVHYLNLSNNQFRK 222 (673)
Q Consensus 166 ~L~~n~l~~~-~~~~-----l~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~ 222 (673)
+++.|.++.. .|+. ...+++|++|+++.|++.+. .-..+..+++|+.|.+..|.+..
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 7777766642 1222 24456777777777776421 12234445566666666666654
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.29 E-value=4.9e-13 Score=125.01 Aligned_cols=226 Identities=24% Similarity=0.239 Sum_probs=152.4
Q ss_pred CCCCCEEEcccC--------ccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccc
Q 005864 39 LMQLTNLEIDNN--------QLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGK 110 (673)
Q Consensus 39 l~~L~~L~L~~n--------~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 110 (673)
+.+|..|.++.. -+....|..+.-+++|.++.++.+.-..+. +....-|.|+.+.+.+..++.. ..+-.
T Consensus 181 ~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~i~-~~~~~kptl~t~~v~~s~~~~~--~~l~p 257 (490)
T KOG1259|consen 181 CTQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTENIV-DIELLKPTLQTICVHNTTIQDV--PSLLP 257 (490)
T ss_pred hhheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhhee-ceeecCchhheeeeeccccccc--ccccc
Confidence 457777777653 222334445555667777777766544222 2223346777777776655421 11111
Q ss_pred cCCCcEEEccc-CccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEE
Q 005864 111 CQQLGTLNFSM-NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189 (673)
Q Consensus 111 l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 189 (673)
...+..+.... .-.+|.........+.|++||||+|.|+ .+..+..-+|.++.|+++.|.+... +.+..+++|+.|
T Consensus 258 e~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~L 334 (490)
T KOG1259|consen 258 ETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLL 334 (490)
T ss_pred hhhhcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEe
Confidence 12222222111 1122223333445678999999999998 5566667779999999999999833 348889999999
Q ss_pred EeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCC-CcccccCCCcccEEEecCccc
Q 005864 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE-IPPQICNLESLEKLNVSHNNL 268 (673)
Q Consensus 190 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l 268 (673)
|||+|.++ .+..+=.++-+++.|.|+.|.|.+ ...+..+-+|..||+++|+|... -...++++|-|+.+.|.+|.+
T Consensus 335 DLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 335 DLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ecccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 99999998 555555678899999999999874 34677888999999999999742 234688999999999999999
Q ss_pred cccCc
Q 005864 269 SGLIP 273 (673)
Q Consensus 269 ~~~~~ 273 (673)
.+...
T Consensus 412 ~~~vd 416 (490)
T KOG1259|consen 412 AGSVD 416 (490)
T ss_pred cccch
Confidence 87643
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.27 E-value=3.4e-12 Score=115.19 Aligned_cols=108 Identities=25% Similarity=0.299 Sum_probs=32.0
Q ss_pred CCCCCCEEEeeCCccccCCCcccc-CCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIG-NLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTF 92 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 92 (673)
+...+++|+|++|.|+.+ ..++ .+.+|+.|+|++|.|+.. +.+..++.|++|++++|+|+.+.......+|+|++
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 334567777777777733 2344 466777777777777632 24666677777777777777554333345667777
Q ss_pred EEccCCcccccc-ccCccccCCCcEEEcccCccC
Q 005864 93 LDISHNNFYGEI-WSSWGKCQQLGTLNFSMNNIT 125 (673)
Q Consensus 93 L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~ 125 (673)
|+|++|+|.... ...++.+++|+.|+|.+|.++
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777777765422 234455666666666666655
No 474
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.26 E-value=9.3e-11 Score=108.14 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=100.4
Q ss_pred ceeccCCcEEEEEEEeCC-------CCEEEEEeeccchhh----------h---------hHHHHHHH----HHHHHHhc
Q 005864 408 QCIGIGGQASVYRGELPS-------GEVVAVKKFHSLLLS----------E---------ISVQREFL----NEIKALTE 457 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~----------~---------~~~~~~~~----~e~~~l~~ 457 (673)
.+||.|--+.||.|...+ +..+|||+++..... + ....+.+. +|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999996543 579999988532210 0 11223333 89999999
Q ss_pred cCC--CcccceeeeeecCCeeeEEEecccCCChHH-HHhcCCCCccchHHHHHHHHHHHHHHHHHH-hhcCCCCeEEecC
Q 005864 458 IRH--RNIVKFYGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKEFSWIVRTNVIKSVANALSYM-HHDCFPPIVHRDI 533 (673)
Q Consensus 458 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dl 533 (673)
++. -++.+++++ ...++||||+.++.+.. .++. ..++..+...+..+++.+|..+ |+. ++|||||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 953 456666654 45789999998754422 2222 1234455667889999999999 788 9999999
Q ss_pred CCCCeEeCCCCceEEecccceeecC
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+++||+++ ++.+.++|||.+....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999987654
No 475
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=5.7e-12 Score=130.47 Aligned_cols=249 Identities=19% Similarity=0.162 Sum_probs=179.7
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEe--CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGEL--PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR 474 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 474 (673)
.....+|..+..||.|.|+.|+.... .++..|++|.+........+.. .-..|+.+...+ -|.++++....|...+
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh-cchhhhhHhhHhhcccccCCCCCCccccc
Confidence 34456888999999999999999843 4788999998876554433322 234566666666 5999999998888888
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGI 553 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 553 (673)
..++--||++++++.....-. ..++...++++..|++.++.++|+. .++|+|++|+||++..+ +..+++|||.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTS---QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred cccCchhhhcCcchhhhhHHH---HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 888999999999887766322 3467777888999999999999998 99999999999999876 7889999999
Q ss_pred eeecCCCCCCceeccccccc-ccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGY-VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y-~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
+..+.-. .......+..| .+|+......+..+.|+||||.-+.|.++|..--.. ...+..+..+..
T Consensus 414 ~t~~~~~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-----------~~~~~~i~~~~~ 480 (524)
T KOG0601|consen 414 WTRLAFS--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-----------GVQSLTIRSGDT 480 (524)
T ss_pred cccccee--cccccccccccccchhhccccccccccccccccccccccccCcccCcc-----------cccceeeecccc
Confidence 8643211 11111122334 366666778889999999999999999987764221 112222333333
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+-... ....+..+.+.+..+++..||.+.+....
T Consensus 481 p~~~~----~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 481 PNLPG----LKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred cCCCc----hHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 22111 11456778888999999999999887644
No 476
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.24 E-value=1.2e-10 Score=102.24 Aligned_cols=146 Identities=18% Similarity=0.280 Sum_probs=112.4
Q ss_pred ccceeccCCcEEEEEEEeCCCCEEEEEe-----eccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 406 AEQCIGIGGQASVYRGELPSGEVVAVKK-----FHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~~~~vavK~-----~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
....+-+|+-+.|+++.+ +|+.+.||. +..+..+..-..++..+|+..+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 457889999999999988 577766663 23333334445677889999999998777776666777777788999
Q ss_pred ecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEEecccceee
Q 005864 481 ECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARVSDFGIAKF 556 (673)
Q Consensus 481 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~ 556 (673)
||++| .++.+++........ ........+..|-+.+.-||.. +|+|+||..+||++.+++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 588888876543222 2233367888999999999999 999999999999997664 358999999864
No 477
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1e-10 Score=103.49 Aligned_cols=134 Identities=24% Similarity=0.368 Sum_probs=105.4
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeec-c----chhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFH-S----LLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~-~----~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
..+++|+-+.+|.+.+. |..+++|.-. + +..+..-...+..+|+.++.+++--.|....=+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999774 4446666432 2 2222223445678899999999877777777788888889999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|..|.+.+... +..++..+-.-+.-||.. +|+|+||.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888764 244667788888899999 999999999999999764 99999999974
No 478
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=6.1e-13 Score=140.69 Aligned_cols=217 Identities=31% Similarity=0.344 Sum_probs=96.1
Q ss_pred CCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEE
Q 005864 38 NLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTL 117 (673)
Q Consensus 38 ~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 117 (673)
.+..++.+++..|.|.. +-..+..+++|..|++.+|+|..+.. .+..+++|++|+|++|.|+.+ ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccc--cchhhccchhhh
Confidence 34444555555555542 22334455555555555555553322 144455555555555555432 333444445555
Q ss_pred EcccCccCccCChhhhccccccccccccccccccCC-ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCC
Q 005864 118 NFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP-IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKL 196 (673)
Q Consensus 118 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 196 (673)
++.+|.|+.+ ..+..++.|+.+++++|++....+ . ...+.+++.+.+.+|.+... ..+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccc
Confidence 5555555522 233335555555555555543222 1 23444555555555555421 2233333333444455554
Q ss_pred CCcCCcccccccc--ccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccc
Q 005864 197 SGSIPETLGNLLK--VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNL 268 (673)
Q Consensus 197 ~~~~~~~l~~l~~--L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 268 (673)
+...+ +..+.. |+.+++++|.+.. .+..+..+..+..|++++|++... ..+.....+..+....|.+
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKL 289 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchh
Confidence 42111 111111 4555555555542 113344444555555555554422 1233334444444444444
No 479
>PLN03150 hypothetical protein; Provisional
Probab=99.22 E-value=4.2e-11 Score=132.38 Aligned_cols=113 Identities=34% Similarity=0.491 Sum_probs=104.0
Q ss_pred CCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEec
Q 005864 185 ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVS 264 (673)
Q Consensus 185 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~ 264 (673)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|.+++.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCccccccC-CCccEEEccCccccCCCC
Q 005864 265 HNNLSGLIPSCFEGM-HGLSCIDISYNELLGLIP 297 (673)
Q Consensus 265 ~N~l~~~~~~~~~~~-~~L~~l~l~~N~l~~~~~ 297 (673)
+|++++.+|..+..+ .++..+++.+|+..+..|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999888764 467889999998766554
No 480
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.22 E-value=1.3e-12 Score=138.12 Aligned_cols=245 Identities=29% Similarity=0.288 Sum_probs=180.2
Q ss_pred CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
.+..++.+.+..|.|+. .-..+..+++|+.|++.+|+|... ...+..+++|++|+|++|+|+.+. .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 45677777889999983 445688899999999999999843 333788999999999999999663 46677789999
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCC-hhhhccccccccccccccccccCCccccCCCCCCEEEccCccc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP-PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l 172 (673)
++++|.|+. ...+..+..|+.+++++|.+....+ . ...+.+|+.+++.+|.+... ..+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccc
Confidence 999999974 4556668999999999999995544 2 57888999999999998632 3344555666668889988
Q ss_pred cccCCccccCCCC--CCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCC---
Q 005864 173 SGNLPRVLGSLSE--LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE--- 247 (673)
Q Consensus 173 ~~~~~~~l~~l~~--L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~--- 247 (673)
+...+ +..+.. |+.+++++|.+. ..+..+..+..+..|++.+|++... ..+.....+..+....|.+...
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAI 295 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhh
Confidence 84322 223333 899999999997 4446677888999999999998753 2355556777888888877632
Q ss_pred Cccc-ccCCCcccEEEecCccccccC
Q 005864 248 IPPQ-ICNLESLEKLNVSHNNLSGLI 272 (673)
Q Consensus 248 ~~~~-~~~l~~L~~L~l~~N~l~~~~ 272 (673)
.... ....+.++.+.+.+|.+....
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 296 SQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred hccccccccccccccccccCcccccc
Confidence 1111 445566666666666665443
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.19 E-value=2.7e-11 Score=109.42 Aligned_cols=122 Identities=30% Similarity=0.345 Sum_probs=35.5
Q ss_pred CCCEEEccCccccccCCcccc-CCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEee
Q 005864 161 SLNYLVLNGNKLSGNLPRVLG-SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 239 (673)
.+++|+|++|+|+.+ +.+. .+.+|+.|++++|.++. + +.+..++.|+.|++++|.|+...+.....+++|+.|++
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 455555555555522 1233 34555555555555552 2 13455556666666666665432222234556666666
Q ss_pred cCCcCCCC-CcccccCCCcccEEEecCccccccCc---cccccCCCccEEE
Q 005864 240 SHNFLGGE-IPPQICNLESLEKLNVSHNNLSGLIP---SCFEGMHGLSCID 286 (673)
Q Consensus 240 s~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~~~~L~~l~ 286 (673)
++|+|.+. .-..+..+++|+.|+|.+|+++.... ..+..+|+|+.||
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 66666532 11345556666666666666653311 2455667777766
No 482
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.18 E-value=1.1e-09 Score=108.06 Aligned_cols=256 Identities=16% Similarity=0.203 Sum_probs=165.6
Q ss_pred CccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee------eec-CCee
Q 005864 405 DAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF------CSH-PRHS 476 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~------~~~-~~~~ 476 (673)
...+.+|+|+-+.+|-.-. -...+-|+++....... .+.++.|... .||-+-.-+.+ ..+ +...
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQ------AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchHH------HHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 3467899999999997522 12234577766532221 1233444444 56644331111 111 2225
Q ss_pred eEEEecccCC-ChHHHH---hcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 477 FLVYECLERG-SLAEIL---SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 477 ~lv~e~~~~g-sL~~~l---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
.+.|+.+.+. ....+. .++......+|....+++..+|.+.+.||.. |.+-+|+.++|+|+.+++.|++.|-+
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 6777777664 233333 2234456789999999999999999999999 99999999999999999999999977
Q ss_pred ceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhC-CCCCccccccccccccccccc--
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSNMNLSL-- 624 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~-- 624 (673)
...... ........+|...|.+||... +..-+..+|.|.+|+++++++.| ++||.++..........+..+
T Consensus 163 sfqi~~-ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 163 SFQINA-NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred ceeecc-CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 665543 233345567889999999754 34457789999999999999986 999987654433222222111
Q ss_pred ------ccccCCCCCCCC-cchHHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHhh
Q 005864 625 ------NEILDPRLPLPS-RNIQDKLISILEVALLCLEES--PESRPTMQTVCQLLC 672 (673)
Q Consensus 625 ------~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~d--p~~Rps~~~v~~~L~ 672 (673)
.+.-.+..+.|. ..+.-.+.++..+...|+... +.-|||++.++..|.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~ 298 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALD 298 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Confidence 111111111111 122233456788888898764 467999999988764
No 483
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.15 E-value=2.5e-10 Score=110.52 Aligned_cols=143 Identities=21% Similarity=0.277 Sum_probs=110.2
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC--CcccceeeeeecC---CeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH--RNIVKFYGFCSHP---RHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~e~ 482 (673)
+.++.|.++.||++...+|+.+++|........ .....+..|++++..+++ ..+.+++.+.... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999998877789999987553221 124567899999999975 4467778877654 356899999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-------------------------------------- 524 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 524 (673)
++|+++.+.+.. ..++......++.++++++.+||+..
T Consensus 82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 999988876532 23566777788888888888888531
Q ss_pred ---------------CCCeEEecCCCCCeEeCC--CCceEEecccceee
Q 005864 525 ---------------FPPIVHRDISSKNVLLSS--EYEARVSDFGIAKF 556 (673)
Q Consensus 525 ---------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~ 556 (673)
...++|+|+.+.||+++. ++.+.++||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 146799999999999998 66789999998863
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.11 E-value=1.7e-11 Score=133.44 Aligned_cols=250 Identities=20% Similarity=0.235 Sum_probs=172.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.+.+.+-+-+|.++.++-+.-. .|...+.|.............+....+-.+.-..+||.++...--+......+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 355667778889999999988443 3544444443322111111233344444444445667777665555566778999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
++|..+++|...++..+. .+..-.......+.++.+|||.. .+.|+|++|.|.+...++..++.|||......-
T Consensus 883 ~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999987652 33334445566788999999998 789999999999999999999999984332210
Q ss_pred ---------------------CC----------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 560 ---------------------GS----------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 560 ---------------------~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
.. .......+|+.|.+||...+......+|.|+.|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 00 01123568999999999999999999999999999999999999987
Q ss_pred ccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHH
Q 005864 609 FISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 665 (673)
.... ...++.+.....+++ ........+..+++...+..+|.+|-.+.
T Consensus 1037 a~tp--------q~~f~ni~~~~~~~p-~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETP--------QQIFENILNRDIPWP-EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccch--------hhhhhccccCCCCCC-CCccccChhhhhhhhhhhccCchhccCcc
Confidence 3322 222233333333333 23344455688899999999999997665
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.03 E-value=3.8e-09 Score=97.25 Aligned_cols=129 Identities=23% Similarity=0.307 Sum_probs=85.2
Q ss_pred EEEEEEeCCCCEEEEEeeccchh-----------------------hhhHHHHHHHHHHHHHhccCCC--cccceeeeee
Q 005864 417 SVYRGELPSGEVVAVKKFHSLLL-----------------------SEISVQREFLNEIKALTEIRHR--NIVKFYGFCS 471 (673)
Q Consensus 417 ~vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 471 (673)
.||.|..++|..+|||..+.... ..........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999998854211 0111234578899999999765 456666442
Q ss_pred cCCeeeEEEeccc--CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHH-HhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 472 HPRHSFLVYECLE--RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY-MHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 472 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
...+||||++ |..+..+.... ++......++.++...+.. +|.. |++|+|+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 3579999999 65554433321 1233455677788886666 4677 99999999999999987 9999
Q ss_pred ecccceeecC
Q 005864 549 SDFGIAKFLK 558 (673)
Q Consensus 549 ~Dfg~~~~~~ 558 (673)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999987653
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.00 E-value=3e-10 Score=128.18 Aligned_cols=128 Identities=22% Similarity=0.304 Sum_probs=57.2
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCc--cccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQ--LFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~--i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
...+.+.+-+|.+. .++... .+++|++|-+.+|. +....+..|..++.|..|||++|.=.+..|..++.+-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 33444444444444 222222 22345555555543 332223334445555555555444333444444455555555
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLN 146 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 146 (673)
+|+++.++ ..|..+.++..|.+|++..+.-...++.....+++|++|.+...
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 55555544 33444555555555555544433333444444555555544433
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=3.2e-10 Score=128.03 Aligned_cols=259 Identities=22% Similarity=0.263 Sum_probs=157.6
Q ss_pred cCCCcccCCCCCCEEEeeCCc--cccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccccc
Q 005864 7 AIPPSVGNFTNLKGLYLYSNS--LSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVF 84 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~ 84 (673)
.++....+ ++|++|-+.+|. +.....+.|..++.|++|||++|.=.+.+|..+++|-+|+.|+|++..|. ..|..+
T Consensus 537 ~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l 614 (889)
T KOG4658|consen 537 HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGL 614 (889)
T ss_pred hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHH
Confidence 44444443 579999999996 66566666889999999999988666689999999999999999999998 456778
Q ss_pred CCCCCccEEEccCCccccccccCccccCCCcEEEcccCccC--ccCChhhhccccccccccccccccccCCccccCCCCC
Q 005864 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT--GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSL 162 (673)
Q Consensus 85 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 162 (673)
.++..|.+|++..+.-....+.....+.+|++|.+...... ...-..+..+.+|+.+....... .+-..+..+..|
T Consensus 615 ~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L 692 (889)
T KOG4658|consen 615 GNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRL 692 (889)
T ss_pred HHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHH
Confidence 89999999999987765555677777999999998776532 22333444555555555543332 111112222222
Q ss_pred C----EEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccc------cccccEEEccCCcCccCCchhhhccc
Q 005864 163 N----YLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGN------LLKVHYLNLSNNQFRKEFPVELEKLV 232 (673)
Q Consensus 163 ~----~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~------l~~L~~L~l~~n~l~~~~~~~~~~l~ 232 (673)
. .+.+.++... ..+..+..+.+|+.|.+..+.+.......... ++++..+...++..-. .+...--.+
T Consensus 693 ~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r-~l~~~~f~~ 770 (889)
T KOG4658|consen 693 RSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLR-DLTWLLFAP 770 (889)
T ss_pred HHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcccccc-ccchhhccC
Confidence 2 3333333333 34445667777777777777765332222111 1122222222222111 122222335
Q ss_pred CCCeEeecCCcCCCCCcccccCCCcccEEEecCcccccc
Q 005864 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL 271 (673)
Q Consensus 233 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 271 (673)
+|+.|.+..+.....+.+....+..+..+-+..+.+.+.
T Consensus 771 ~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 771 HLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred cccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 777777777766655555555555555555555555544
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.96 E-value=1.4e-08 Score=99.49 Aligned_cols=144 Identities=22% Similarity=0.179 Sum_probs=103.4
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh--------HHHHHHHHHHHHHhccCCC--cccceeeeeec-----
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI--------SVQREFLNEIKALTEIRHR--NIVKFYGFCSH----- 472 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~--------~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~----- 472 (673)
+.+-......|+++.. +|+.|.||+......... .....+.+|...+.++... .+.+++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4555555566778766 688999997744321110 0112477899999888533 34455666543
Q ss_pred CCeeeEEEecccCC-ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-------CC
Q 005864 473 PRHSFLVYECLERG-SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-------EY 544 (673)
Q Consensus 473 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-------~~ 544 (673)
...-++|+|++++. +|.+++..... .+.+...+..++.+++..+.-||+. ||+|+|++++||+++. +.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 23467999999986 89999864221 2345567778999999999999999 9999999999999975 46
Q ss_pred ceEEecccceee
Q 005864 545 EARVSDFGIAKF 556 (673)
Q Consensus 545 ~~kl~Dfg~~~~ 556 (673)
.+.++||+.+..
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 799999998864
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.94 E-value=7.8e-10 Score=82.05 Aligned_cols=59 Identities=39% Similarity=0.624 Sum_probs=25.7
Q ss_pred CCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCc
Q 005864 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN 99 (673)
Q Consensus 41 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 99 (673)
+|++|++++|+|+...+..|.++++|++|++++|.|+.+.+..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333344444444444444444444444444444444444444443
No 490
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.94 E-value=3.3e-10 Score=106.31 Aligned_cols=211 Identities=16% Similarity=0.116 Sum_probs=125.2
Q ss_pred ccCCCCCCEEEcccCccccccC-cccc-CCCCCcEEEccCccccc--ccccccCCCCCccEEEccCCccccccccCcccc
Q 005864 36 IGNLMQLTNLEIDNNQLFGQIP-RSLR-NLASLNRVHLEQNHLTG--NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKC 111 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~~~~-~~l~-~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 111 (673)
+..++.++.|.+.++.|..... ..|+ .++.++.|+|.+|.|+. .+...+.++|.|+.|+|+.|++...+...-..+
T Consensus 41 v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~ 120 (418)
T KOG2982|consen 41 VSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPL 120 (418)
T ss_pred eccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccc
Confidence 4444556677777777754332 1222 35678888888888883 344567888889999999888874332222466
Q ss_pred CCCcEEEcccCccCcc-CChhhhcccccccccccccccccc--CCccccCC-CCCCEEEccCcccccc--CCccccCCCC
Q 005864 112 QQLGTLNFSMNNITGS-IPPEIGKLYQLHKLDFSLNQIVGE--IPIELGNL-KSLNYLVLNGNKLSGN--LPRVLGSLSE 185 (673)
Q Consensus 112 ~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~i~~~--~~~~l~~l-~~L~~L~L~~n~l~~~--~~~~l~~l~~ 185 (673)
.+|++|.|.+..+.-. ....+..+|.+++|.++.|.+... ........ +.+.+|.+..|...-. ....-.-+|+
T Consensus 121 ~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpn 200 (418)
T KOG2982|consen 121 KNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPN 200 (418)
T ss_pred cceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhccc
Confidence 7888888888877632 233456778888888888844311 11112222 3555666555544310 1111123466
Q ss_pred CCEEEeCCCCCCCc-CCccccccccccEEEccCCcCccC-CchhhhcccCCCeEeecCCcCCC
Q 005864 186 LEYLDLSTNKLSGS-IPETLGNLLKVHYLNLSNNQFRKE-FPVELEKLVQLSELDLSHNFLGG 246 (673)
Q Consensus 186 L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ls~N~l~~ 246 (673)
+..+.+..|.+... ..+.+..++.+-.|+|+.|+|..- .-..+.+++.|..|.+++|++.+
T Consensus 201 v~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 201 VNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred chheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 77777777766532 223445556666777777776542 22345666666666677666654
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.92 E-value=8.8e-10 Score=81.77 Aligned_cols=61 Identities=34% Similarity=0.505 Sum_probs=58.0
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHL 76 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i 76 (673)
|+|++|+|++|+|+.+.++.|.++++|++|++++|.++...+.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999988889999999999999999999988889999999999999999986
No 492
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.88 E-value=5.9e-08 Score=98.67 Aligned_cols=216 Identities=17% Similarity=0.210 Sum_probs=150.3
Q ss_pred CcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee----cCCeeeEEEecccC-CC
Q 005864 414 GQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS----HPRHSFLVYECLER-GS 487 (673)
Q Consensus 414 ~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-gs 487 (673)
-..+.|++.. .||..|++|+++....... ..-..-+++++++.|+|+|++.+++. .+...++||+|.++ ++
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 4568899954 4899999999954432221 12234688999999999999999886 34567899999986 47
Q ss_pred hHHHHhcCC------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 488 LAEILSNDG------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 488 L~~~l~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
|.+.--... .....++...|.++.|+..||.++|+. |+.-+-|.+++|+++.+.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEeccccee
Confidence 777642221 123467899999999999999999999 99999999999999999999999999887
Q ss_pred ecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
....+.. |.+ .--.+-|.-.||.+++.+.||..--. ..+ ...+. ++.
T Consensus 442 vl~~d~~--------------~~l---e~~Qq~D~~~lG~ll~aLAt~~~ns~----~~d-------~~~~s---~~~-- 488 (655)
T KOG3741|consen 442 VLQEDPT--------------EPL---ESQQQNDLRDLGLLLLALATGTENSN----RTD-------STQSS---HLT-- 488 (655)
T ss_pred eecCCCC--------------cch---hHHhhhhHHHHHHHHHHHhhcccccc----ccc-------chHHH---HHH--
Confidence 7655431 111 11236799999999999999854310 000 00000 000
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....++.++.+++.......+.+ -+..+++.+
T Consensus 489 -~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 489 -RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred -HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 112244455777777777777765 566666654
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.85 E-value=2e-08 Score=94.64 Aligned_cols=138 Identities=22% Similarity=0.214 Sum_probs=98.6
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhh-----------------h--hHHHHHHHHHHHHHhccCCC--c
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLS-----------------E--ISVQREFLNEIKALTEIRHR--N 462 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----------------~--~~~~~~~~~e~~~l~~l~h~--n 462 (673)
..++..||.|--+.||.|..+.|.++|||.-+..... + .-......+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4567889999999999999999999999965322110 0 01234467899999988644 5
Q ss_pred ccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 463 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
|.+.+++ +...+||||++|--|...- ++......++..|.+-+.-.-.. |+||+|+++-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6666554 4568999999996665431 11223334555555555555566 9999999999999999
Q ss_pred CCceEEecccceee
Q 005864 543 EYEARVSDFGIAKF 556 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~ 556 (673)
||.+.++||--+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999976654
No 494
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.75 E-value=2.3e-09 Score=112.81 Aligned_cols=148 Identities=20% Similarity=0.274 Sum_probs=103.4
Q ss_pred HHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC----ce-----eccccccccccccccc
Q 005864 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN----WT-----EFAGTFGYVAPELAYT 581 (673)
Q Consensus 511 ~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~----~~-----~~~~~~~y~aPE~~~~ 581 (673)
.+++.|+.|+|... ++||++|.|++|.++..+.+|++.|+.+....++... +. .......|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 35669999999884 9999999999999999999999999998765442221 11 1224568999999999
Q ss_pred CCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCC
Q 005864 582 MKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPE 659 (673)
Q Consensus 582 ~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 659 (673)
...+.++|+||+|+.+|.+.. |+.-+.......... ..... +..... .....+.++.+=+.+++..++.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~------~~~~~~~~~~~~---~s~~~p~el~~~l~k~l~~~~~ 254 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS------FSRNLLNAGAFG---YSNNLPSELRESLKKLLNGDSA 254 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhh------hhhccccccccc---ccccCcHHHHHHHHHHhcCCcc
Confidence 888999999999999999994 555444221111100 00000 001111 1123455688888999999999
Q ss_pred CCCCHHHHHH
Q 005864 660 SRPTMQTVCQ 669 (673)
Q Consensus 660 ~Rps~~~v~~ 669 (673)
-||++.++..
T Consensus 255 ~rp~~~~l~~ 264 (700)
T KOG2137|consen 255 VRPTLDLLLS 264 (700)
T ss_pred cCcchhhhhc
Confidence 9998877654
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.74 E-value=1.6e-07 Score=86.79 Aligned_cols=141 Identities=21% Similarity=0.218 Sum_probs=103.8
Q ss_pred eccCCcEEEEEEEeCCCCEEEEEeeccchhhh---hHHHHHHHHHHHHHhccCC--Ccccceeeeee-c----CCeeeEE
Q 005864 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSE---ISVQREFLNEIKALTEIRH--RNIVKFYGFCS-H----PRHSFLV 479 (673)
Q Consensus 410 ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~-~----~~~~~lv 479 (673)
-|+||.+.|++... +|+.+-+|+-....... +.....|.+|+..+.++.. -.+.++. ++. . ...-++|
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46799999999877 45578888764111111 2346789999999999953 2344444 332 1 1235799
Q ss_pred EecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc--eEEecccceee
Q 005864 480 YECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE--ARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 556 (673)
+|-+++ -+|.+++.... ..+.+...+..++.++++.++-||+. |+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 48999886543 23467777889999999999999999 9999999999999986666 99999987763
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.74 E-value=1.4e-10 Score=121.09 Aligned_cols=127 Identities=30% Similarity=0.263 Sum_probs=55.7
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|...+.+.|.+. ....++.-++.|+.|+|++|++++. +.+..+++|++|||++|.++.+.-....++ .|..|.|++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrn 241 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRN 241 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeecc
Confidence 444444444444 3333444444555555555555422 144445555555555555543221122222 255555555
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCc-cccccCCCccEEEccCccccC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~~~L~~l~l~~N~l~~ 294 (673)
|.++.. ..+.++++|+.||+++|-|.+... ..+..+..|+.|+|.||++.+
T Consensus 242 N~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 242 NALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred cHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 554411 224445555555555554443211 223344445555555555543
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.71 E-value=1.6e-09 Score=101.70 Aligned_cols=209 Identities=22% Similarity=0.186 Sum_probs=105.0
Q ss_pred CCCcEEEccCccccccccc-cc-CCCCCccEEEccCCcccc--ccccCccccCCCcEEEcccCccCccCChhhhcccccc
Q 005864 64 ASLNRVHLEQNHLTGNISE-VF-GIYPNLTFLDISHNNFYG--EIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLH 139 (673)
Q Consensus 64 ~~L~~L~L~~n~i~~~~~~-~~-~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 139 (673)
.-+..|.+.++.|..+... .| +..++++.|||.+|.|+. .....+.+++.|+.|+|+.|.+..
T Consensus 45 ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s------------- 111 (418)
T KOG2982|consen 45 RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS------------- 111 (418)
T ss_pred cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC-------------
Confidence 3444555666665533221 11 334556666666666653 112223445555555555555542
Q ss_pred ccccccccccccCCccccCCCCCCEEEccCcccccc-CCccccCCCCCCEEEeCCCCCCC--cCCccccc-cccccEEEc
Q 005864 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN-LPRVLGSLSELEYLDLSTNKLSG--SIPETLGN-LLKVHYLNL 215 (673)
Q Consensus 140 ~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~--~~~~~l~~-l~~L~~L~l 215 (673)
.+...-..+.+|+.|-|.+..+... ....+..+|.++.|+++.|.+.. ...+.... -+.+++|++
T Consensus 112 -----------~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~ 180 (418)
T KOG2982|consen 112 -----------DIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQ 180 (418)
T ss_pred -----------ccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhc
Confidence 2211112334555555555444321 11233445555555555553211 00111111 123344444
Q ss_pred cCCcCcc--CCchhhhcccCCCeEeecCCcCCCCCc-ccccCCCcccEEEecCcccccc-CccccccCCCccEEEccCcc
Q 005864 216 SNNQFRK--EFPVELEKLVQLSELDLSHNFLGGEIP-PQICNLESLEKLNVSHNNLSGL-IPSCFEGMHGLSCIDISYNE 291 (673)
Q Consensus 216 ~~n~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~~~~L~~l~l~~N~ 291 (673)
..|.... .....-..++++..+.+..|++..... ..+..++.+..|+|+.|+|... ..+.+..++.|..|.+++|+
T Consensus 181 ~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~P 260 (418)
T KOG2982|consen 181 LPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENP 260 (418)
T ss_pred CCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCc
Confidence 4433210 000011224577788888887764322 3466678888889999988654 23567888999999999998
Q ss_pred ccCCC
Q 005864 292 LLGLI 296 (673)
Q Consensus 292 l~~~~ 296 (673)
+....
T Consensus 261 l~d~l 265 (418)
T KOG2982|consen 261 LSDPL 265 (418)
T ss_pred ccccc
Confidence 86544
No 498
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.65 E-value=1.5e-07 Score=99.98 Aligned_cols=143 Identities=22% Similarity=0.277 Sum_probs=96.3
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh---------------------------H----------HHHHHHH
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI---------------------------S----------VQREFLN 450 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~---------------------------~----------~~~~~~~ 450 (673)
+.|+.++-|.||+|++++|+.||||+.+....... . ..-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999998865432110 0 1112455
Q ss_pred HHHHHhccC-----CCcccceeeeeecCCeeeEEEecccCCChHHHH--hcCCCCccchHHHHHHHHHHHHHHH-HHHhh
Q 005864 451 EIKALTEIR-----HRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL--SNDGSIKEFSWIVRTNVIKSVANAL-SYMHH 522 (673)
Q Consensus 451 e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~ 522 (673)
|...+.+++ .|++.-..=|+...+...++|||++|-.+.+.. +..+ .+. ..++..++++. ..+=.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g----~d~---k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG----IDR---KELAELLVRAFLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC----CCH---HHHHHHHHHHHHHHHHh
Confidence 666666653 344433333444456678999999999998884 4432 221 22222222221 11222
Q ss_pred cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 523 ~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
. |++|.|..|.||+++.++++.+.|||+...+.+.
T Consensus 284 d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 284 D---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred c---CccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 3 8999999999999999999999999999877543
No 499
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.65 E-value=2.2e-07 Score=88.13 Aligned_cols=127 Identities=17% Similarity=0.259 Sum_probs=93.5
Q ss_pred CCCEEEEEeeccchhhh----hHHHHHHHHHHHHHhccC--CCcccceeeeeecCC----eeeEEEecccCC-ChHHHHh
Q 005864 425 SGEVVAVKKFHSLLLSE----ISVQREFLNEIKALTEIR--HRNIVKFYGFCSHPR----HSFLVYECLERG-SLAEILS 493 (673)
Q Consensus 425 ~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~ 493 (673)
.++.+.+|......... ........+|...+..++ .-.+.+.+++..... ..++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 45667777543221111 122446778888888885 334566777765532 347999999984 8999987
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEEecccceeec
Q 005864 494 NDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARVSDFGIAKFL 557 (673)
Q Consensus 494 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~ 557 (673)
.... .+......++.++++.++-||+. ||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 111 ~~~~---~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 111 QWEQ---LDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hhcc---cchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 6432 45566788999999999999999 999999999999999887 8999999988754
No 500
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=1e-09 Score=103.16 Aligned_cols=176 Identities=22% Similarity=0.228 Sum_probs=83.2
Q ss_pred CccEEEccCCccccc-cccCccccCCCcEEEcccCccCccCChhhhcccccccccccccc-cccc-CCccccCCCCCCEE
Q 005864 89 NLTFLDISHNNFYGE-IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQ-IVGE-IPIELGNLKSLNYL 165 (673)
Q Consensus 89 ~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-i~~~-~~~~l~~l~~L~~L 165 (673)
.|++|||++..|+.. ....++.|.+|+.|.|.++++.+.+...+....+|+.|+|+.+. ++.. ..-.+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 366666666555421 12234555666666666666665555556666666666666542 2110 01123445566666
Q ss_pred EccCccccccCCccc--cCCCCCCEEEeCCCCC---CCcCCccccccccccEEEccCCc-CccCCchhhhcccCCCeEee
Q 005864 166 VLNGNKLSGNLPRVL--GSLSELEYLDLSTNKL---SGSIPETLGNLLKVHYLNLSNNQ-FRKEFPVELEKLVQLSELDL 239 (673)
Q Consensus 166 ~L~~n~l~~~~~~~l--~~l~~L~~L~l~~n~l---~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l 239 (673)
+|++|.++....... .--++|+.|+|+++.- ...+..-..++++|..||||+|. ++......|.+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 666665542211111 1124555555554421 11111122345556666665543 23223334455555555555
Q ss_pred cCCcCCCCCcc---cccCCCcccEEEecCc
Q 005864 240 SHNFLGGEIPP---QICNLESLEKLNVSHN 266 (673)
Q Consensus 240 s~N~l~~~~~~---~~~~l~~L~~L~l~~N 266 (673)
+.|.. ++|. .+...|+|.+|++.++
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 55543 2332 2334455555555443
Done!