Query 005866
Match_columns 673
No_of_seqs 366 out of 2590
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 14:54:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005866.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005866hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 2E-118 5E-123 956.6 51.0 638 17-662 3-756 (972)
2 TIGR01647 ATPase-IIIA_H plasma 100.0 4E-115 9E-120 999.9 67.9 609 36-662 1-612 (755)
3 KOG0205 Plasma membrane H+-tra 100.0 3E-117 5E-122 918.9 42.2 651 8-658 8-658 (942)
4 PRK10517 magnesium-transportin 100.0 1E-114 2E-119 1007.8 68.0 634 16-665 47-718 (902)
5 PRK15122 magnesium-transportin 100.0 5E-114 1E-118 1003.3 68.7 640 16-664 25-717 (903)
6 COG0474 MgtA Cation transport 100.0 2E-115 4E-120 1017.2 55.7 647 15-665 20-720 (917)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 6E-114 1E-118 1013.1 65.2 641 14-665 3-827 (1053)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 3E-113 6E-118 996.9 69.5 634 16-665 13-683 (867)
9 KOG0204 Calcium transporting A 100.0 8E-112 2E-116 904.4 47.9 648 22-671 102-827 (1034)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 6E-110 1E-114 982.5 68.7 648 15-664 14-764 (997)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 5E-110 1E-114 980.9 67.2 639 22-663 43-748 (941)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-108 2E-113 964.5 68.4 630 16-664 2-698 (884)
13 TIGR01657 P-ATPase-V P-type AT 100.0 4E-104 9E-109 939.0 58.7 617 34-663 137-878 (1054)
14 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-100 5E-105 895.7 61.6 599 65-665 1-711 (917)
15 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.3E-99 7E-104 806.9 28.5 661 3-665 23-787 (1019)
16 PRK14010 potassium-transportin 100.0 1.6E-94 3.5E-99 802.2 53.4 540 67-663 28-582 (673)
17 PRK01122 potassium-transportin 100.0 3.6E-92 7.7E-97 784.2 58.0 522 67-644 29-567 (679)
18 TIGR01652 ATPase-Plipid phosph 100.0 4.2E-91 9.1E-96 830.5 49.7 605 49-663 1-847 (1057)
19 KOG0208 Cation transport ATPas 100.0 2.5E-90 5.4E-95 749.5 45.0 607 25-645 149-911 (1140)
20 COG2217 ZntA Cation transport 100.0 1.1E-88 2.4E-93 755.4 52.5 504 96-663 173-678 (713)
21 TIGR01497 kdpB K+-transporting 100.0 7.6E-88 1.6E-92 747.6 57.6 538 67-659 28-583 (675)
22 PLN03190 aminophospholipid tra 100.0 9.1E-87 2E-91 784.7 53.7 605 48-663 86-950 (1178)
23 PRK11033 zntA zinc/cadmium/mer 100.0 2.3E-82 4.9E-87 726.5 52.2 498 96-661 205-705 (741)
24 KOG0207 Cation transport ATPas 100.0 8.4E-83 1.8E-87 691.9 36.9 520 97-671 341-872 (951)
25 TIGR01494 ATPase_P-type ATPase 100.0 5.9E-79 1.3E-83 676.8 49.0 472 104-663 3-480 (499)
26 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.3E-78 7.1E-83 672.5 48.8 505 76-669 4-512 (536)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 1.5E-77 3.3E-82 671.5 52.5 516 77-663 5-526 (556)
28 TIGR01511 ATPase-IB1_Cu copper 100.0 9.5E-77 2.1E-81 662.8 55.2 491 96-663 53-545 (562)
29 PRK10671 copA copper exporting 100.0 5.6E-76 1.2E-80 687.2 56.6 506 96-664 285-792 (834)
30 KOG0209 P-type ATPase [Inorgan 100.0 1E-75 2.2E-80 622.3 29.8 563 35-614 161-836 (1160)
31 KOG0206 P-type ATPase [General 100.0 4.7E-74 1E-78 653.7 28.0 608 45-663 28-873 (1151)
32 KOG0210 P-type ATPase [Inorgan 100.0 4.6E-73 1E-77 591.8 28.4 590 44-654 74-851 (1051)
33 COG2216 KdpB High-affinity K+ 100.0 7.7E-63 1.7E-67 502.4 33.8 478 109-642 78-567 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.3E-36 2.7E-41 304.5 22.2 220 103-323 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 8.9E-26 1.9E-30 223.4 11.1 211 327-604 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 2E-15 4.4E-20 128.3 11.1 123 482-635 20-145 (152)
37 PF00690 Cation_ATPase_N: Cati 99.4 1.1E-12 2.4E-17 104.1 7.0 67 18-84 1-69 (69)
38 PRK11133 serB phosphoserine ph 99.1 4E-10 8.7E-15 117.1 11.4 131 492-637 181-316 (322)
39 TIGR02137 HSK-PSP phosphoserin 99.1 6.3E-10 1.4E-14 108.3 11.9 131 492-639 68-198 (203)
40 PRK01158 phosphoglycolate phos 99.1 6.7E-10 1.5E-14 111.1 11.9 153 485-637 12-226 (230)
41 TIGR01487 SPP-like sucrose-pho 99.1 4.9E-10 1.1E-14 110.8 9.3 145 492-636 18-215 (215)
42 PRK10513 sugar phosphate phosp 99.1 1.4E-09 3.1E-14 111.6 13.0 67 571-637 195-265 (270)
43 COG0561 Cof Predicted hydrolas 99.1 2E-09 4.4E-14 110.0 14.1 154 485-638 12-259 (264)
44 smart00831 Cation_ATPase_N Cat 99.0 5.7E-10 1.2E-14 87.2 7.1 59 29-87 2-62 (64)
45 PRK15126 thiamin pyrimidine py 99.0 9.2E-10 2E-14 113.1 8.9 66 572-637 188-259 (272)
46 TIGR02726 phenyl_P_delta pheny 99.0 2.7E-09 5.9E-14 100.2 10.0 105 499-633 41-147 (169)
47 PRK10976 putative hydrolase; P 99.0 2.3E-09 5E-14 109.7 10.3 66 572-637 190-261 (266)
48 TIGR01482 SPP-subfamily Sucros 98.9 4.8E-09 1E-13 104.5 11.4 146 492-637 15-222 (225)
49 TIGR00338 serB phosphoserine p 98.9 7.7E-09 1.7E-13 102.6 10.8 128 492-635 85-218 (219)
50 TIGR01670 YrbI-phosphatas 3-de 98.9 9.9E-09 2.2E-13 95.6 10.5 105 500-636 36-145 (154)
51 PRK10530 pyridoxal phosphate ( 98.9 2E-08 4.3E-13 103.2 12.4 66 572-637 199-268 (272)
52 PLN02887 hydrolase family prot 98.8 1.8E-08 3.9E-13 112.2 12.4 53 585-637 524-576 (580)
53 PF08282 Hydrolase_3: haloacid 98.8 8.4E-09 1.8E-13 104.2 9.1 66 571-636 185-254 (254)
54 COG0560 SerB Phosphoserine pho 98.8 1.7E-08 3.6E-13 98.8 10.5 119 491-624 76-199 (212)
55 TIGR01486 HAD-SF-IIB-MPGP mann 98.8 8E-08 1.7E-12 97.7 13.1 54 584-637 194-253 (256)
56 PF13246 Hydrolase_like2: Puta 98.7 3.4E-08 7.4E-13 82.8 6.2 65 374-439 20-90 (91)
57 PRK09484 3-deoxy-D-manno-octul 98.7 9.2E-08 2E-12 91.8 9.7 102 499-632 55-160 (183)
58 TIGR00099 Cof-subfamily Cof su 98.7 4.3E-08 9.3E-13 99.7 7.3 66 571-636 187-256 (256)
59 PRK13582 thrH phosphoserine ph 98.6 2.4E-07 5.2E-12 90.8 11.8 125 492-636 68-195 (205)
60 PRK03669 mannosyl-3-phosphogly 98.6 2.9E-07 6.2E-12 94.5 12.8 67 571-637 186-265 (271)
61 COG1778 Low specificity phosph 98.6 1.7E-07 3.6E-12 83.5 7.7 115 499-645 42-164 (170)
62 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 3.5E-07 7.6E-12 89.2 9.8 117 492-621 80-200 (201)
63 PRK00192 mannosyl-3-phosphogly 98.5 9.6E-07 2.1E-11 90.7 12.1 66 572-637 190-267 (273)
64 TIGR03333 salvage_mtnX 2-hydro 98.5 1.1E-06 2.3E-11 86.8 11.7 138 491-637 69-209 (214)
65 KOG1615 Phosphoserine phosphat 98.5 3E-07 6.5E-12 84.6 6.3 102 492-610 88-199 (227)
66 PF12710 HAD: haloacid dehalog 98.3 6.6E-07 1.4E-11 86.6 6.2 92 495-601 92-192 (192)
67 PLN02954 phosphoserine phospha 98.3 5.7E-06 1.2E-10 82.3 12.5 125 492-635 84-222 (224)
68 PRK09552 mtnX 2-hydroxy-3-keto 98.3 5.5E-06 1.2E-10 82.1 10.8 133 492-636 74-212 (219)
69 PRK13222 phosphoglycolate phos 98.2 1.6E-05 3.5E-10 79.0 11.8 128 491-639 92-224 (226)
70 TIGR01488 HAD-SF-IB Haloacid D 98.2 4.1E-06 8.8E-11 79.9 6.9 101 492-603 73-177 (177)
71 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 8.6E-06 1.9E-10 78.4 9.0 114 491-608 71-186 (188)
72 COG0546 Gph Predicted phosphat 98.1 1.8E-05 4E-10 78.4 11.1 126 490-637 87-218 (220)
73 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 1E-05 2.3E-10 78.9 8.7 108 490-610 85-197 (202)
74 TIGR01485 SPP_plant-cyano sucr 98.1 1.1E-05 2.3E-10 81.7 8.6 148 490-637 19-244 (249)
75 TIGR01454 AHBA_synth_RP 3-amin 97.9 5.4E-05 1.2E-09 74.1 10.6 124 492-636 75-203 (205)
76 TIGR02471 sucr_syn_bact_C sucr 97.9 1.7E-05 3.8E-10 79.5 6.0 68 571-638 158-233 (236)
77 PLN02382 probable sucrose-phos 97.9 7E-05 1.5E-09 81.0 10.9 67 571-637 174-257 (413)
78 cd01427 HAD_like Haloacid deha 97.9 4.2E-05 9E-10 68.9 7.8 118 488-608 20-138 (139)
79 TIGR02461 osmo_MPG_phos mannos 97.8 6.5E-05 1.4E-09 74.6 9.0 43 490-532 13-55 (225)
80 PRK08238 hypothetical protein; 97.8 0.00013 2.7E-09 80.3 10.8 99 492-615 72-170 (479)
81 PRK13288 pyrophosphatase PpaX; 97.8 0.00015 3.3E-09 71.5 10.1 124 492-636 82-210 (214)
82 PRK13223 phosphoglycolate phos 97.8 0.00018 3.8E-09 73.8 10.8 126 491-637 100-230 (272)
83 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00021 4.5E-09 70.9 10.7 38 495-532 19-56 (221)
84 TIGR01449 PGP_bact 2-phosphogl 97.7 0.00018 3.9E-09 70.8 9.4 122 492-634 85-211 (213)
85 PRK10187 trehalose-6-phosphate 97.6 0.00015 3.3E-09 73.9 7.6 139 492-636 36-240 (266)
86 PRK13226 phosphoglycolate phos 97.5 0.00055 1.2E-08 68.3 10.2 126 492-638 95-226 (229)
87 TIGR03351 PhnX-like phosphonat 97.5 0.00071 1.5E-08 66.9 10.5 125 491-635 86-218 (220)
88 TIGR01422 phosphonatase phosph 97.5 0.00085 1.8E-08 68.0 11.2 97 492-606 99-196 (253)
89 PRK10826 2-deoxyglucose-6-phos 97.5 0.00057 1.2E-08 67.8 9.5 122 491-633 91-216 (222)
90 TIGR01544 HAD-SF-IE haloacid d 97.4 0.0021 4.5E-08 65.0 12.9 127 491-636 120-273 (277)
91 PRK12702 mannosyl-3-phosphogly 97.4 0.0016 3.5E-08 65.7 12.0 43 491-533 17-59 (302)
92 PRK11590 hypothetical protein; 97.4 0.00092 2E-08 65.8 9.7 106 492-611 95-203 (211)
93 TIGR01545 YfhB_g-proteo haloac 97.4 0.00076 1.7E-08 66.1 9.0 107 492-611 94-202 (210)
94 PRK13478 phosphonoacetaldehyde 97.4 0.0016 3.4E-08 66.6 11.6 96 492-605 101-197 (267)
95 PRK13225 phosphoglycolate phos 97.4 0.002 4.3E-08 65.9 12.1 121 492-636 142-267 (273)
96 PLN03243 haloacid dehalogenase 97.3 0.0019 4.1E-08 65.6 10.6 122 492-634 109-232 (260)
97 COG4030 Uncharacterized protei 97.2 0.0021 4.6E-08 61.1 9.8 146 492-638 83-263 (315)
98 PRK14502 bifunctional mannosyl 97.2 0.0011 2.5E-08 74.2 9.3 48 485-532 425-473 (694)
99 PLN02770 haloacid dehalogenase 97.2 0.0025 5.4E-08 64.4 10.8 116 492-626 108-227 (248)
100 TIGR01484 HAD-SF-IIB HAD-super 97.0 0.0025 5.3E-08 62.3 8.4 39 492-530 17-55 (204)
101 TIGR01548 HAD-SF-IA-hyp1 haloa 97.0 0.0011 2.4E-08 64.4 5.9 94 490-603 104-197 (197)
102 PRK11587 putative phosphatase; 97.0 0.0043 9.3E-08 61.3 9.8 114 492-625 83-198 (218)
103 COG4359 Uncharacterized conser 97.0 0.0025 5.5E-08 58.7 7.3 112 492-609 73-184 (220)
104 PRK14501 putative bifunctional 97.0 0.01 2.2E-07 69.6 14.3 61 571-637 656-721 (726)
105 TIGR02253 CTE7 HAD superfamily 96.9 0.0035 7.7E-08 61.9 8.9 98 492-610 94-195 (221)
106 PRK06769 hypothetical protein; 96.9 0.0043 9.2E-08 58.9 8.7 98 493-608 29-134 (173)
107 PF05116 S6PP: Sucrose-6F-phos 96.9 0.0027 5.9E-08 63.9 7.4 68 570-637 163-243 (247)
108 PRK06698 bifunctional 5'-methy 96.9 0.0043 9.3E-08 68.7 9.6 124 492-639 330-456 (459)
109 PRK11009 aphA acid phosphatase 96.8 0.0034 7.4E-08 62.4 7.8 89 492-606 114-206 (237)
110 PRK08942 D,D-heptose 1,7-bisph 96.8 0.0076 1.6E-07 57.6 9.8 127 492-636 29-176 (181)
111 PHA02530 pseT polynucleotide k 96.8 0.0046 9.9E-08 64.4 8.5 108 489-607 184-292 (300)
112 PLN02779 haloacid dehalogenase 96.7 0.0065 1.4E-07 62.7 9.1 123 492-633 144-269 (286)
113 TIGR01662 HAD-SF-IIIA HAD-supe 96.7 0.0062 1.3E-07 54.9 7.9 93 491-606 24-126 (132)
114 PLN02575 haloacid dehalogenase 96.7 0.012 2.7E-07 62.3 11.0 121 492-633 216-338 (381)
115 TIGR01672 AphA HAD superfamily 96.6 0.0039 8.5E-08 62.0 6.6 89 492-606 114-206 (237)
116 PRK14988 GMP/IMP nucleotidase; 96.6 0.0053 1.1E-07 61.0 7.4 99 492-611 93-195 (224)
117 TIGR01428 HAD_type_II 2-haloal 96.6 0.0068 1.5E-07 58.8 8.0 95 492-607 92-188 (198)
118 TIGR02254 YjjG/YfnB HAD superf 96.4 0.012 2.5E-07 58.2 8.6 119 492-634 97-222 (224)
119 TIGR01668 YqeG_hyp_ppase HAD s 96.4 0.016 3.5E-07 54.7 8.8 108 454-606 20-131 (170)
120 PTZ00174 phosphomannomutase; P 96.4 0.0025 5.4E-08 64.3 3.4 54 571-624 187-245 (247)
121 TIGR01990 bPGM beta-phosphoglu 96.4 0.006 1.3E-07 58.3 5.8 94 492-606 87-180 (185)
122 PF13419 HAD_2: Haloacid dehal 96.3 0.0037 8.1E-08 58.7 4.2 98 490-606 75-172 (176)
123 TIGR01509 HAD-SF-IA-v3 haloaci 96.3 0.015 3.2E-07 55.4 8.0 95 492-606 85-179 (183)
124 TIGR00213 GmhB_yaeD D,D-heptos 96.3 0.021 4.5E-07 54.4 8.9 123 493-632 27-174 (176)
125 PRK09449 dUMP phosphatase; Pro 96.1 0.025 5.4E-07 56.0 9.1 123 492-636 95-222 (224)
126 TIGR02009 PGMB-YQAB-SF beta-ph 96.1 0.011 2.3E-07 56.6 5.9 93 491-606 87-181 (185)
127 smart00775 LNS2 LNS2 domain. T 96.1 0.036 7.8E-07 51.6 9.1 101 490-606 25-141 (157)
128 TIGR01656 Histidinol-ppas hist 96.0 0.013 2.9E-07 53.8 5.9 97 492-606 27-140 (147)
129 PLN02940 riboflavin kinase 96.0 0.021 4.5E-07 61.5 8.1 115 492-625 93-211 (382)
130 TIGR01685 MDP-1 magnesium-depe 95.9 0.029 6.3E-07 53.0 7.8 110 484-609 37-155 (174)
131 TIGR01549 HAD-SF-IA-v1 haloaci 95.3 0.024 5.3E-07 52.4 5.0 90 493-604 65-154 (154)
132 TIGR02252 DREG-2 REG-2-like, H 95.3 0.045 9.7E-07 53.3 7.0 95 492-606 105-200 (203)
133 TIGR01261 hisB_Nterm histidino 95.3 0.029 6.3E-07 52.5 5.3 99 492-608 29-144 (161)
134 PLN02811 hydrolase 95.3 0.05 1.1E-06 53.8 7.3 100 491-607 77-180 (220)
135 KOG4383 Uncharacterized conser 95.2 0.33 7.1E-06 53.6 13.4 179 481-659 815-1099(1354)
136 KOG4383 Uncharacterized conser 95.2 0.079 1.7E-06 58.2 8.7 82 95-176 86-198 (1354)
137 COG2179 Predicted hydrolase of 95.1 0.16 3.5E-06 46.5 9.3 110 451-606 20-133 (175)
138 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.1 0.25 5.4E-06 49.6 11.9 94 485-604 17-115 (242)
139 smart00577 CPDc catalytic doma 95.1 0.028 6E-07 51.8 4.4 98 490-609 43-140 (148)
140 TIGR01533 lipo_e_P4 5'-nucleot 94.8 0.15 3.3E-06 51.5 9.4 87 490-601 116-205 (266)
141 TIGR00685 T6PP trehalose-phosp 94.7 0.063 1.4E-06 54.0 6.3 67 566-636 161-239 (244)
142 TIGR01691 enolase-ppase 2,3-di 94.6 0.076 1.7E-06 52.3 6.5 100 489-609 92-194 (220)
143 PF06888 Put_Phosphatase: Puta 94.4 0.11 2.4E-06 51.4 7.0 104 492-600 71-185 (234)
144 TIGR01675 plant-AP plant acid 94.3 0.23 5E-06 48.9 8.9 89 490-598 118-210 (229)
145 TIGR01681 HAD-SF-IIIC HAD-supe 94.3 0.14 2.9E-06 45.9 6.7 39 492-530 29-68 (128)
146 TIGR01664 DNA-3'-Pase DNA 3'-p 94.2 0.14 3.1E-06 48.1 7.1 94 493-607 43-158 (166)
147 PRK05446 imidazole glycerol-ph 94.0 0.11 2.3E-06 55.0 6.3 99 491-607 29-144 (354)
148 PLN02919 haloacid dehalogenase 94.0 0.24 5.1E-06 60.4 10.0 119 492-632 161-285 (1057)
149 KOG3040 Predicted sugar phosph 93.7 0.31 6.7E-06 46.3 8.0 51 482-532 13-66 (262)
150 PLN02205 alpha,alpha-trehalose 93.6 0.34 7.4E-06 57.4 10.2 66 450-528 587-653 (854)
151 COG3769 Predicted hydrolase (H 93.5 0.45 9.7E-06 45.6 8.8 37 496-532 27-63 (274)
152 TIGR02247 HAD-1A3-hyp Epoxide 93.1 0.1 2.2E-06 51.2 4.1 97 491-606 93-191 (211)
153 PRK10563 6-phosphogluconate ph 92.8 0.2 4.4E-06 49.3 6.0 98 491-609 87-184 (221)
154 PLN03017 trehalose-phosphatase 92.3 3.2 7E-05 43.9 14.1 62 571-636 282-355 (366)
155 PLN02580 trehalose-phosphatase 92.3 0.26 5.6E-06 52.4 6.0 63 571-637 300-374 (384)
156 PRK09456 ?-D-glucose-1-phospha 92.1 0.25 5.4E-06 47.9 5.4 95 492-607 84-181 (199)
157 TIGR01686 FkbH FkbH-like domai 91.9 0.44 9.6E-06 50.0 7.4 90 492-609 31-128 (320)
158 PF09419 PGP_phosphatase: Mito 91.9 0.64 1.4E-05 43.5 7.5 107 454-604 36-157 (168)
159 TIGR01993 Pyr-5-nucltdase pyri 90.1 0.37 8E-06 46.0 4.4 98 492-607 84-181 (184)
160 PLN02645 phosphoglycolate phos 90.1 0.74 1.6E-05 48.1 6.9 48 485-532 37-87 (311)
161 PRK10725 fructose-1-P/6-phosph 90.1 0.64 1.4E-05 44.4 6.0 90 497-606 92-181 (188)
162 KOG3120 Predicted haloacid deh 89.9 0.47 1E-05 45.6 4.6 115 492-610 84-209 (256)
163 PHA02597 30.2 hypothetical pro 88.7 0.98 2.1E-05 43.5 6.2 99 492-613 74-177 (197)
164 PF13344 Hydrolase_6: Haloacid 87.1 0.5 1.1E-05 40.3 2.7 48 485-532 7-57 (101)
165 COG0637 Predicted phosphatase/ 86.5 1.9 4.2E-05 42.5 6.9 98 491-607 85-182 (221)
166 PF03767 Acid_phosphat_B: HAD 86.1 1.1 2.4E-05 44.4 4.9 89 492-599 115-207 (229)
167 PF08235 LNS2: LNS2 (Lipin/Ned 85.0 5.6 0.00012 36.7 8.5 104 490-606 25-141 (157)
168 TIGR01517 ATPase-IIB_Ca plasma 84.5 6.7 0.00015 47.6 11.4 201 99-306 134-359 (941)
169 PRK10748 flavin mononucleotide 83.1 3.3 7.2E-05 41.3 6.9 91 492-609 113-206 (238)
170 PLN02177 glycerol-3-phosphate 82.9 5.1 0.00011 44.6 8.7 98 493-611 111-215 (497)
171 PLN02423 phosphomannomutase 82.5 1.9 4.1E-05 43.3 4.9 40 571-611 188-232 (245)
172 TIGR02251 HIF-SF_euk Dullard-l 81.7 0.93 2E-05 42.4 2.1 43 489-532 39-81 (162)
173 COG1011 Predicted hydrolase (H 81.2 5.3 0.00011 39.3 7.5 121 492-636 99-226 (229)
174 TIGR01684 viral_ppase viral ph 80.1 3.1 6.7E-05 42.5 5.3 41 493-533 146-187 (301)
175 PRK10444 UMP phosphatase; Prov 79.5 2.1 4.5E-05 43.1 4.0 47 485-531 10-59 (248)
176 TIGR01680 Veg_Stor_Prot vegeta 79.3 8.8 0.00019 38.8 8.2 90 490-598 143-236 (275)
177 TIGR01458 HAD-SF-IIA-hyp3 HAD- 78.1 2.8 6.2E-05 42.4 4.5 48 485-532 10-64 (257)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 77.9 4.7 0.0001 40.8 6.0 118 495-635 123-253 (257)
179 PHA03398 viral phosphatase sup 76.9 4.4 9.6E-05 41.4 5.3 41 493-533 148-189 (303)
180 TIGR01493 HAD-SF-IA-v2 Haloaci 76.8 3.5 7.5E-05 38.7 4.5 86 492-603 90-175 (175)
181 TIGR01663 PNK-3'Pase polynucle 76.0 6.7 0.00014 43.9 6.9 40 493-532 198-249 (526)
182 TIGR01457 HAD-SF-IIA-hyp2 HAD- 75.2 5.2 0.00011 40.2 5.5 49 485-533 10-61 (249)
183 COG3700 AphA Acid phosphatase 74.9 7.1 0.00015 36.3 5.5 89 493-609 115-210 (237)
184 COG0241 HisB Histidinol phosph 73.9 10 0.00023 35.9 6.6 24 493-516 32-55 (181)
185 TIGR02244 HAD-IG-Ncltidse HAD 72.9 19 0.00041 38.0 9.0 106 494-605 186-317 (343)
186 PF05822 UMPH-1: Pyrimidine 5' 72.2 20 0.00043 35.8 8.4 134 491-636 89-241 (246)
187 TIGR01647 ATPase-IIIA_H plasma 71.8 80 0.0017 37.4 14.9 157 140-305 111-268 (755)
188 TIGR01689 EcbF-BcbF capsule bi 70.8 5.1 0.00011 35.6 3.6 31 491-521 23-53 (126)
189 COG0474 MgtA Cation transport 68.9 1.1E+02 0.0023 37.3 15.4 202 102-305 111-330 (917)
190 KOG0210 P-type ATPase [Inorgan 68.5 26 0.00057 39.7 9.1 104 58-163 95-205 (1051)
191 PTZ00174 phosphomannomutase; P 67.2 8.4 0.00018 38.7 4.9 35 492-526 22-56 (247)
192 TIGR01494 ATPase_P-type ATPase 65.9 8 0.00017 43.3 4.9 149 140-306 53-213 (499)
193 TIGR01524 ATPase-IIIB_Mg magne 65.4 1.6E+02 0.0036 35.5 16.0 197 102-304 97-317 (867)
194 PRK15122 magnesium-transportin 62.5 1.5E+02 0.0031 36.1 14.8 158 141-305 174-351 (903)
195 PRK10517 magnesium-transportin 61.6 2.3E+02 0.005 34.4 16.2 159 141-303 185-351 (902)
196 PTZ00445 p36-lilke protein; Pr 60.8 17 0.00036 35.3 5.2 62 444-518 28-101 (219)
197 COG0647 NagD Predicted sugar p 58.6 12 0.00026 37.9 4.1 47 483-529 15-61 (269)
198 TIGR01452 PGP_euk phosphoglyco 57.7 11 0.00025 38.5 3.9 48 485-532 11-61 (279)
199 TIGR01657 P-ATPase-V P-type AT 57.6 4.6E+02 0.01 32.5 20.3 75 103-188 196-273 (1054)
200 TIGR01522 ATPase-IIA2_Ca golgi 57.1 2.7E+02 0.0058 33.8 15.8 200 102-306 89-307 (884)
201 TIGR01106 ATPase-IIC_X-K sodiu 55.6 3.3E+02 0.0072 33.5 16.4 200 101-304 111-325 (997)
202 CHL00200 trpA tryptophan synth 53.8 67 0.0015 32.6 8.6 90 490-601 126-218 (263)
203 cd02433 Nodulin-21_like_2 Nodu 53.0 48 0.001 32.9 7.3 43 9-51 83-126 (234)
204 PF13242 Hydrolase_like: HAD-h 52.9 15 0.00032 29.1 3.0 52 574-625 11-70 (75)
205 TIGR01459 HAD-SF-IIA-hyp4 HAD- 52.2 13 0.00028 37.1 3.2 92 494-607 140-237 (242)
206 PF12689 Acid_PPase: Acid Phos 49.7 30 0.00065 32.5 4.9 41 492-532 45-86 (169)
207 PRK11507 ribosome-associated p 49.1 23 0.0005 27.8 3.4 27 136-162 37-63 (70)
208 PF03120 DNA_ligase_OB: NAD-de 48.7 11 0.00023 30.7 1.5 22 147-168 45-67 (82)
209 TIGR02250 FCP1_euk FCP1-like p 48.7 33 0.00071 31.7 5.0 42 490-532 56-97 (156)
210 PLN02591 tryptophan synthase 48.4 1.1E+02 0.0023 30.8 9.0 87 494-602 117-209 (250)
211 PRK05585 yajC preprotein trans 46.0 1.6E+02 0.0035 25.3 8.4 24 116-139 37-60 (106)
212 PF12710 HAD: haloacid dehalog 45.8 11 0.00024 35.7 1.4 14 330-343 1-14 (192)
213 PF13275 S4_2: S4 domain; PDB: 45.4 13 0.00029 28.7 1.5 27 137-164 34-60 (65)
214 PF13380 CoA_binding_2: CoA bi 44.5 25 0.00053 30.7 3.3 39 493-531 64-103 (116)
215 PF00122 E1-E2_ATPase: E1-E2 A 43.9 1.9E+02 0.0042 28.2 10.2 62 106-176 2-63 (230)
216 COG1188 Ribosome-associated he 43.3 60 0.0013 27.4 5.1 32 134-166 32-63 (100)
217 TIGR01456 CECR5 HAD-superfamil 43.2 88 0.0019 32.7 7.9 49 484-532 8-64 (321)
218 PF01455 HupF_HypC: HupF/HypC 42.8 61 0.0013 25.3 4.9 33 133-165 16-51 (68)
219 TIGR00739 yajC preprotein tran 42.6 1.9E+02 0.0041 23.7 8.3 22 118-139 24-45 (84)
220 PLN02151 trehalose-phosphatase 42.3 52 0.0011 34.9 5.8 62 571-636 268-341 (354)
221 COG1877 OtsB Trehalose-6-phosp 42.0 1.4E+02 0.0031 30.3 8.7 44 484-527 32-76 (266)
222 PF11694 DUF3290: Protein of u 41.8 1.3E+02 0.0028 27.7 7.6 21 143-163 97-117 (149)
223 PRK14194 bifunctional 5,10-met 40.9 1.5E+02 0.0031 30.8 8.7 45 489-533 12-65 (301)
224 PF00389 2-Hacid_dh: D-isomer 39.7 2.6E+02 0.0057 24.6 11.7 77 565-650 43-123 (133)
225 PRK01122 potassium-transportin 39.2 5E+02 0.011 30.3 13.6 84 442-531 445-530 (679)
226 PF15584 Imm44: Immunity prote 38.9 14 0.00029 30.4 0.7 19 154-172 13-31 (94)
227 TIGR00739 yajC preprotein tran 37.4 78 0.0017 25.9 4.9 14 150-163 36-49 (84)
228 PF06506 PrpR_N: Propionate ca 37.4 1.4E+02 0.003 28.0 7.6 106 496-648 65-172 (176)
229 PF12368 DUF3650: Protein of u 37.2 29 0.00062 21.9 1.8 15 34-48 13-27 (28)
230 KOG3085 Predicted hydrolase (H 36.5 83 0.0018 31.3 5.9 104 495-620 116-223 (237)
231 PRK10671 copA copper exporting 35.7 4.2E+02 0.0092 31.8 13.0 31 275-305 469-499 (834)
232 COG0279 GmhA Phosphoheptose is 35.2 1.1E+02 0.0023 28.6 5.8 59 439-521 91-149 (176)
233 PRK14188 bifunctional 5,10-met 35.1 1.6E+02 0.0035 30.4 8.0 45 489-533 10-64 (296)
234 TIGR01452 PGP_euk phosphoglyco 34.9 1E+02 0.0023 31.4 6.8 39 568-606 203-242 (279)
235 PRK05886 yajC preprotein trans 34.7 1.1E+02 0.0024 26.4 5.6 47 100-163 4-50 (109)
236 cd00860 ThrRS_anticodon ThrRS 34.3 87 0.0019 25.2 5.0 46 487-532 7-53 (91)
237 PF14336 DUF4392: Domain of un 33.8 94 0.002 32.1 6.1 36 496-531 64-100 (291)
238 PRK14179 bifunctional 5,10-met 33.3 2E+02 0.0044 29.5 8.3 45 489-533 10-64 (284)
239 PRK11033 zntA zinc/cadmium/mer 32.4 1.8E+02 0.0038 34.5 8.8 159 139-307 261-420 (741)
240 TIGR01460 HAD-SF-IIA Haloacid 32.4 56 0.0012 32.4 4.1 48 485-532 7-58 (236)
241 COG1862 YajC Preprotein transl 31.3 1.3E+02 0.0027 25.4 5.3 11 152-162 44-54 (97)
242 PRK05585 yajC preprotein trans 31.1 1.3E+02 0.0028 25.8 5.5 40 107-163 25-64 (106)
243 cd02071 MM_CoA_mut_B12_BD meth 30.9 44 0.00096 29.3 2.8 80 452-532 21-104 (122)
244 PF01988 VIT1: VIT family; In 30.4 1.5E+02 0.0032 29.0 6.6 44 3-48 59-105 (213)
245 PRK14189 bifunctional 5,10-met 30.2 2.2E+02 0.0047 29.3 7.9 45 489-533 11-64 (285)
246 COG5547 Small integral membran 30.2 2.4E+02 0.0051 21.1 5.9 48 65-120 3-52 (62)
247 COG2503 Predicted secreted aci 30.0 3.1E+02 0.0067 27.4 8.4 41 492-532 122-166 (274)
248 PRK14174 bifunctional 5,10-met 30.0 2E+02 0.0043 29.7 7.6 45 489-533 9-63 (295)
249 cd02067 B12-binding B12 bindin 30.0 47 0.001 28.8 2.8 80 452-532 21-104 (119)
250 cd02432 Nodulin-21_like_1 Nodu 29.9 3.9E+02 0.0084 26.2 9.4 40 9-48 71-111 (218)
251 PLN02645 phosphoglycolate phos 29.8 1E+02 0.0022 32.0 5.8 59 576-636 239-307 (311)
252 KOG2882 p-Nitrophenyl phosphat 29.5 87 0.0019 32.1 4.8 48 485-532 31-81 (306)
253 COG0078 ArgF Ornithine carbamo 29.5 5E+02 0.011 26.9 10.1 33 496-532 91-123 (310)
254 smart00306 HintN Hint (Hedgeho 28.8 60 0.0013 26.8 3.2 28 134-161 72-99 (100)
255 PF02699 YajC: Preprotein tran 28.1 97 0.0021 25.1 4.1 13 151-163 36-48 (82)
256 PRK11840 bifunctional sulfur c 27.7 7.3E+02 0.016 26.0 11.2 51 478-528 164-217 (326)
257 cd02434 Nodulin-21_like_3 Nodu 27.5 2.7E+02 0.0058 27.5 7.9 35 10-44 67-102 (225)
258 TIGR02471 sucr_syn_bact_C sucr 27.4 47 0.001 32.8 2.6 35 497-532 20-54 (236)
259 PF02358 Trehalose_PPase: Treh 27.4 70 0.0015 31.6 3.9 61 566-626 159-233 (235)
260 PRK04980 hypothetical protein; 26.5 83 0.0018 26.8 3.4 57 133-194 18-81 (102)
261 PLN03190 aminophospholipid tra 26.4 1.8E+02 0.0039 36.4 7.7 24 153-176 177-200 (1178)
262 KOG2914 Predicted haloacid-hal 26.3 1.6E+02 0.0034 29.1 5.9 101 492-609 92-194 (222)
263 PF09926 DUF2158: Uncharacteri 26.0 45 0.00097 24.6 1.6 12 153-164 2-13 (53)
264 COG1778 Low specificity phosph 25.1 50 0.0011 30.4 2.0 27 321-347 2-28 (170)
265 cd05017 SIS_PGI_PMI_1 The memb 25.0 1.2E+02 0.0027 26.2 4.6 37 493-531 55-91 (119)
266 PF08645 PNK3P: Polynucleotide 25.0 59 0.0013 30.1 2.6 22 494-515 31-52 (159)
267 COG4229 Predicted enolase-phos 24.8 1.7E+02 0.0036 27.8 5.3 31 489-519 100-130 (229)
268 PF05568 ASFV_J13L: African sw 24.6 1.2E+02 0.0026 27.2 4.1 32 118-149 53-84 (189)
269 PRK08433 flagellar motor switc 24.4 63 0.0014 28.0 2.4 26 145-170 38-63 (111)
270 TIGR00216 ispH_lytB (E)-4-hydr 24.4 6.8E+02 0.015 25.6 10.3 137 444-611 99-263 (280)
271 TIGR00262 trpA tryptophan synt 24.2 3.7E+02 0.0081 27.0 8.4 40 490-529 122-163 (256)
272 COG2217 ZntA Cation transport 24.2 1.2E+03 0.026 27.4 14.2 76 104-189 178-255 (713)
273 PRK13111 trpA tryptophan synth 24.0 3.2E+02 0.0069 27.6 7.8 85 493-598 127-213 (258)
274 PLN02423 phosphomannomutase 23.6 1.1E+02 0.0024 30.5 4.6 30 492-522 24-53 (245)
275 TIGR02329 propionate_PrpR prop 23.5 9.2E+02 0.02 27.2 12.1 70 496-595 85-155 (526)
276 PF03129 HGTP_anticodon: Antic 23.4 1.4E+02 0.003 24.4 4.4 48 485-532 3-54 (94)
277 KOG1250 Threonine/serine dehyd 23.0 2.5E+02 0.0054 30.1 6.8 72 496-598 100-174 (457)
278 COG4996 Predicted phosphatase 22.7 2E+02 0.0043 25.7 5.1 53 480-532 23-81 (164)
279 PF13748 ABC_membrane_3: ABC t 22.6 5.4E+02 0.012 25.5 8.7 39 105-143 146-184 (237)
280 cd04906 ACT_ThrD-I_1 First of 22.3 2.7E+02 0.0058 22.5 5.8 34 485-518 42-76 (85)
281 TIGR01501 MthylAspMutase methy 22.3 1.5E+02 0.0032 26.7 4.5 80 453-532 24-112 (134)
282 PF05240 APOBEC_C: APOBEC-like 22.3 92 0.002 23.2 2.6 24 495-518 2-25 (55)
283 cd00859 HisRS_anticodon HisRS 22.3 1.6E+02 0.0035 23.2 4.6 47 486-532 6-53 (91)
284 PF06738 DUF1212: Protein of u 22.2 6.1E+02 0.013 23.9 9.2 24 23-48 70-93 (193)
285 PRK15108 biotin synthase; Prov 22.1 9.2E+02 0.02 25.4 11.3 117 444-597 78-200 (345)
286 PRK15424 propionate catabolism 22.1 1E+03 0.022 27.0 12.0 70 496-595 95-165 (538)
287 cd02435 CCC1 CCC1. CCC1: This 21.9 3.4E+02 0.0073 27.1 7.4 36 10-45 85-122 (241)
288 PRK03692 putative UDP-N-acetyl 21.8 5.1E+02 0.011 25.9 8.7 125 498-647 95-230 (243)
289 PF12017 Tnp_P_element: Transp 21.7 1.4E+02 0.003 29.8 4.5 36 498-533 199-234 (236)
290 TIGR01652 ATPase-Plipid phosph 21.2 2.9E+02 0.0064 34.2 8.3 102 59-162 18-127 (1057)
291 PRK14170 bifunctional 5,10-met 21.0 1.9E+02 0.0042 29.6 5.5 45 489-533 10-63 (284)
292 PRK14169 bifunctional 5,10-met 20.8 2.1E+02 0.0045 29.3 5.8 45 489-533 9-62 (282)
293 PRK14167 bifunctional 5,10-met 20.6 2.1E+02 0.0045 29.6 5.7 45 489-533 10-63 (297)
294 COG1862 YajC Preprotein transl 20.5 5.2E+02 0.011 21.8 7.1 26 117-142 29-54 (97)
295 cd05014 SIS_Kpsf KpsF-like pro 20.5 80 0.0017 27.6 2.5 26 494-519 60-85 (128)
296 PF02219 MTHFR: Methylenetetra 20.4 1.1E+02 0.0024 31.4 3.8 39 482-520 72-111 (287)
297 TIGR02988 YaaA_near_RecF S4 do 20.2 1.1E+02 0.0024 22.8 2.8 24 137-160 35-58 (59)
298 COG2501 S4-like RNA binding pr 20.1 1.2E+02 0.0027 24.0 3.1 27 136-162 37-63 (73)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-118 Score=956.58 Aligned_cols=638 Identities=32% Similarity=0.500 Sum_probs=546.7
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005866 17 DLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (673)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 94 (673)
+.|..+++|++..|.++ .+|||.+|+.+|++.||.|+++... .+.|..+++||.+++..+|++++++||.+.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45778999999999999 7899999999999999999999766 667888999999999999999999999986
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~ 174 (673)
.|.+++.|.++++++.+..+||||++++++++|+++.|+.++|+|+|+.+.+++++|||||||.|+-||+||||.+|++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCCcccCCC--------------CCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCc
Q 005866 175 GDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGH 239 (673)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~ 239 (673)
..++.+|||+|||||.|+.|.. .|++|+||.|..|.++++|+.||.+|.+|++.+.++.. ++++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9999999999999999999953 36899999999999999999999999999999988877 56899
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHH-HHhhc---c-C---CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhc
Q 005866 240 FQKVLTAIGNFCICSIA-VGMIVEII-VMYPI---Q-D---REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (673)
Q Consensus 240 ~~~~~~~i~~~~~~~i~-~~~~~~~~-~~~~~---~-~---~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~ 310 (673)
+|+.++.++..+.-++. +.+.++++ +.++. + + ..+...+..++++.+++||++||..++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999887652222 22222222 11211 1 2 233445666788999999999999999999999999999
Q ss_pred CCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecc-----------cCC------------------ChH-
Q 005866 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-----------KGV------------------DAD- 360 (673)
Q Consensus 311 ~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-----------~~~------------------~~~- 360 (673)
++++||++.++|+||.+++||+|||||||+|+|.+.++++.... .++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999987652110 000 111
Q ss_pred --HHHHHHHHcccc------c-----ccchHHHHHHhhcCC-----h---HH-----------HhccCcEEEEecCCCCC
Q 005866 361 --TVVLMAAQASRT------E-----NQDAIDAAIVGMLAD-----P---KE-----------ARAGIQEVHFLPFNPTD 408 (673)
Q Consensus 361 --~~~~~~~~~~~~------~-----~~~~~~~a~~~~~~~-----~---~~-----------~~~~~~~~~~~~f~~~~ 408 (673)
.++.+++.|+.. . .+.|.+.|+.-.+.. . .. ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 233344443321 1 245777777643211 0 00 12234556889999999
Q ss_pred ceEEEEEEcCCCe--EEEEEeCcHHHHHHhccCC------------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCC---
Q 005866 409 KRTALTYIDNAGK--MHRVSKGAPEQILNLAHNK------------SDIERRVHAVIDKFAERGLRSLAVAYQEVPE--- 471 (673)
Q Consensus 409 ~~~~v~~~~~~g~--~~~~~kGa~e~i~~~~~~~------------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~--- 471 (673)
|+|++.+.++.+. +..|+|||+|.++++|+.. +..++.+.+...+|+++|+|||++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999865554 7889999999999999642 2346788889999999999999999997663
Q ss_pred --------CCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccc
Q 005866 472 --------GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSAL 541 (673)
Q Consensus 472 --------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~ 541 (673)
..+...|.+|+|+|++++.||||++++++|+.|+++||+|+|+|||+..||.++|+++|+..... ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 12456789999999999999999999999999999999999999999999999999999975433 45678
Q ss_pred cccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhc
Q 005866 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 620 (673)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aa 620 (673)
.|.++++ ++..+++....+..+|+|++|.+|.++|+.||++|++|+|+|||+||+||||.||+||||| +|+++||+||
T Consensus 636 TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 8988876 7778888889999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeee
Q 005866 621 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSAL 662 (673)
Q Consensus 621 d~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 662 (673)
|+||.||||++|+.|+++||.+|.|||+|+.|+++.|++.+.
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~ 756 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVV 756 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 999999999999999999999999999999999999998754
No 2
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.1e-115 Score=999.88 Aligned_cols=609 Identities=60% Similarity=0.955 Sum_probs=544.6
Q ss_pred CCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 005866 36 GLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISF 115 (673)
Q Consensus 36 GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 115 (673)
|||.+|+++|+++||+|+++.++++.|..|+++|++|+.|+++++++++++++ .|.+++.|+++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999887888899999999999999999999999874 78899999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCC
Q 005866 116 IEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (673)
Q Consensus 116 ~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~ 195 (673)
++|+++++.+++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999987799999999999999999
Q ss_pred CCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 005866 196 PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREY 274 (673)
Q Consensus 196 ~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 274 (673)
+||.+|+||.+.+|+++++|++||.+|.+|++.++++++. .++++++.+++++.++++++++.+++.+++++...+.+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998874 567999999999988766554444444444443345678
Q ss_pred hhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecc
Q 005866 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT 354 (673)
Q Consensus 275 ~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~ 354 (673)
..++..++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|.+.+.+. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8888899999999999999999999999999999999999999999999999999999999999999999988642 22
Q ss_pred cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHH
Q 005866 355 KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQI 433 (673)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~-~g~~~~~~kGa~e~i 433 (673)
.+.++++++.+++.++...+.||++.|+..+..+....+..++.++.+||++.+|+|++.+... +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2356777777777666566778999999987765444455678889999999999999888754 377888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEE
Q 005866 434 LNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (673)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m 513 (673)
++.|++..+.++++.+.+++++.+|+|++++||++ .|++|+|+|+++|+||+|||++++|+.||++|++++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999983 2568899999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHhCCCCCCCCCcc-ccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECC
Q 005866 514 ITGDQLAIGKETGRRLGMGTNMYPSSA-LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (673)
Q Consensus 514 ~TGD~~~~a~~ia~~~gi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGD 592 (673)
+|||++.+|.++|+++||..+...... ..|.+. +.+++.++++.+++.++|||++|+||.++|+.+|++|++|+|+||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 999999999999999999753222211 122222 235556788899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeee
Q 005866 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSAL 662 (673)
Q Consensus 593 g~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 662 (673)
|+||+|||++||||||||+|+|+||++||+||++|||+.|+.++++||++|+||++++.|.++.|+..++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997654
No 3
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-117 Score=918.86 Aligned_cols=651 Identities=86% Similarity=1.268 Sum_probs=632.5
Q ss_pred HHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005866 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (673)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 87 (673)
.++.++|..+...+|.+++++.|+....|||.+|+++|++.||+|++..++.+.+++|+..||+|+.|++..+++++..+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 67888888889999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeee
Q 005866 88 ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIP 167 (673)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vP 167 (673)
.++.+.+++|.++..|..++++++.++|+||+++.+...+|++.+.++++|+|||+|.++++++||||||+.++.|++||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHH
Q 005866 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247 (673)
Q Consensus 168 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (673)
||++|++|.-|+||+|.|||||.|+.|++|+.+|+||+|.+|++.++|++||.+|..|+.++++..+.+..+|++.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCc
Q 005866 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (673)
Q Consensus 248 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v 327 (673)
+.++++.+++++++.+.+.|+.+.+.++..+.+.+.+++..+|.++|..+++.++.++.||+++|.++|+.+++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999888888888888888888888889889999999999999999999999999999999999999999999
Q ss_pred eEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCC
Q 005866 328 DVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPT 407 (673)
Q Consensus 328 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~ 407 (673)
|++|+|||||||.|++++.+..++.+.++.++|++++.|+.+++.++.|.+|.|+++.+.+|.+.+.+++.++++||+|.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888888999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEe
Q 005866 408 DKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487 (673)
Q Consensus 408 ~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i 487 (673)
.||.+..+.+++|..+..+||||+++++.|..+.++++...+.+++|+++|+|.+++|++..++...+....+|.|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
-+-||+|.++.++|+.....|++|.|+|||....++..++++|+..+.+++..+.|...++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~ 647 (673)
+.|+||.++|+.||+++|.++|+|||+||+|+||.||+|||+.+++|+|+.++|+|++.+.++.+..++..+|.+|++|+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccc
Q 005866 648 NYTVSIFPDLG 658 (673)
Q Consensus 648 ~~~~~~~~~~~ 658 (673)
.|..|.++-.+
T Consensus 648 nytiyavsiti 658 (942)
T KOG0205|consen 648 NYTIYAVSITI 658 (942)
T ss_pred hheeeeehhHH
Confidence 99888875443
No 4
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=9.5e-115 Score=1007.79 Aligned_cols=634 Identities=30% Similarity=0.467 Sum_probs=556.6
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccch-HHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005866 16 VDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 94 (673)
..++..+.+++++.|+++.+|||++|+++|+++||+|+++.++++ +|..|+++|++|++++++++++++++++
T Consensus 47 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------ 120 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120 (902)
T ss_pred HHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc------
Confidence 346788999999999999999999999999999999999988765 6778999999999999999999999874
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC------CEEEEEeCCCCCCCcEEEEcCCCeeec
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGDIIPA 168 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~Lv~GDiI~l~~G~~vPa 168 (673)
+|.+++.|+++++++.++++++|+++++++++|++..+++++|+|| |++++|++++|||||+|.|++||+|||
T Consensus 121 -~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 121 -DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 7888999999999999999999999999999999999999999999 789999999999999999999999999
Q ss_pred eEEEEecCCeeEecccccCCCCcccCCCCC-------------eeeecceeeeCeEEEEEEEecccccccchhhhhccc-
Q 005866 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT- 234 (673)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (673)
||+|++|+++.||||+|||||.|+.|.+++ ++|+||.+.+|+++++|++||.+|.+|++.++++++
T Consensus 200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~ 279 (902)
T PRK10517 200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279 (902)
T ss_pred eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence 999999988899999999999999998874 799999999999999999999999999999999876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 235 NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
.+++++++.+++++++++.+.++.+.+.+++++ +...+|..++..++++++++|||+||++++++++.++.+|+|+|++
T Consensus 280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~-~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~il 358 (902)
T PRK10517 280 SEPNAFQQGISRVSWLLIRFMLVMAPVVLLING-YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVI 358 (902)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 668999999999987765444333333333322 2345677788889999999999999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--H
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--K 390 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~~~~--~ 390 (673)
+|+++++|+||++|++|||||||||+|+|.+.+.. . ..+.+.++++..++..+.. ...||++.|++.+.... .
T Consensus 359 Vk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~ 435 (902)
T PRK10517 359 VKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESAR 435 (902)
T ss_pred EecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999998642 1 1233455666666554332 24689999998875432 1
Q ss_pred HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCe
Q 005866 391 EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLR 460 (673)
Q Consensus 391 ~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r 460 (673)
.....++.++.+||++.+|+|++++...++.+..++||+||.++++|+.. ++..+.+.+..++++++|+|
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~r 515 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLR 515 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCE
Confidence 23446788899999999999999887667778899999999999999641 23355677778899999999
Q ss_pred EEEEEEeecCCCCCC---CCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC
Q 005866 461 SLAVAYQEVPEGRKD---SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 537 (673)
Q Consensus 461 ~l~~a~~~~~~~~~~---~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~ 537 (673)
++++||++++..+.+ ..|++++|+|+++|+||+||+++++|+.|+++|++++|+|||++.||.++|+++||. .
T Consensus 516 vlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~ 591 (902)
T PRK10517 516 VVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD----A 591 (902)
T ss_pred EEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----c
Confidence 999999987643321 236789999999999999999999999999999999999999999999999999995 2
Q ss_pred CccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHH
Q 005866 538 SSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (673)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~ 617 (673)
..++.|.+++. ++++++++.+++.+||||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||
T Consensus 592 ~~v~~G~el~~-l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAk 670 (902)
T PRK10517 592 GEVLIGSDIET-LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670 (902)
T ss_pred cCceeHHHHHh-CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHH
Confidence 45777877764 66778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 618 ~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
++||+||++|||+.|+.++++||++|+||+|++.|.++.|+..+++++
T Consensus 671 eaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~ 718 (902)
T PRK10517 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVL 718 (902)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999998877654
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=5.3e-114 Score=1003.27 Aligned_cols=640 Identities=30% Similarity=0.471 Sum_probs=555.4
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC---
Q 005866 16 VDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGG--- 91 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~--- 91 (673)
...|..+.+++++.|+++.+|||.+|+++|+++||+|+++.++ +++|..|+++|++|+.++++++++++++++...
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3578999999999999999999999999999999999999877 557788999999999999999999999885321
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC------CEEEEEeCCCCCCCcEEEEcCCC
Q 005866 92 -GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGD 164 (673)
Q Consensus 92 -~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~Lv~GDiI~l~~G~ 164 (673)
+...+|.+++.|+++++++.+++++||++++++.++|+++.+++++|+|| |++++|++++|+|||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 22347889999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred eeeceEEEEecCCeeEecccccCCCCcccCCC-----------------------CCeeeecceeeeCeEEEEEEEeccc
Q 005866 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDGVYSGSTCKQGEIEAVVIATGVH 221 (673)
Q Consensus 165 ~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~-----------------------~~~v~aGt~v~~g~~~~~V~~tG~~ 221 (673)
+|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.+.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999988999999999999999975 3789999999999999999999999
Q ss_pred ccccchhhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHH
Q 005866 222 TFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301 (673)
Q Consensus 222 T~~g~i~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~ 301 (673)
|++|++.+++.+....+++++.++++.+++..+..+.+.+.+++. .....+|..++..++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~-~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN-GFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 999999999887666789999988887764433222222222221 2234567778888999999999999999999999
Q ss_pred HHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHccc--ccccchHH
Q 005866 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR--TENQDAID 379 (673)
Q Consensus 302 ~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 379 (673)
+.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|.+.+.+ .. .+.+.++++.+++.++. ....||++
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~~-~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--DV-SGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--cC-CCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 999999999999999999999999999999999999999999998753 11 23344556665554322 23468999
Q ss_pred HHHHhhcCChH--HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----------hHHHHHH
Q 005866 380 AAIVGMLADPK--EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRV 447 (673)
Q Consensus 380 ~a~~~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~----------~~~~~~~ 447 (673)
.|++.+..... .....++.++.+||++.+++|++++...+|+++.++|||||.++++|++. ++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 99998764321 12345778899999999999999988767888999999999999999631 2335567
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCC-----CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHH
Q 005866 448 HAVIDKFAERGLRSLAVAYQEVPEGRK-----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG 522 (673)
Q Consensus 448 ~~~~~~~~~~G~r~l~~a~~~~~~~~~-----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a 522 (673)
.+..+.++.+|+|++++||++++..+. +..|++++|+|+++|+||+||+++++|++|+++||+++|+|||++.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 778899999999999999998765331 235778999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhh
Q 005866 523 KETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (673)
Q Consensus 523 ~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~ 602 (673)
.++|+++||.. ..++.|.+++. +++.++.+.+++.+||||++|+||.++|+.+|++|++|+|+|||+||+|||++
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 35677877764 66778889999999999999999999999999999999999999999999999
Q ss_pred CCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Q 005866 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664 (673)
Q Consensus 603 AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 664 (673)
||||||||+|+|+||++||+||++|||++|+.++++||++|+||+|++.|.++.|+..++++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~ 717 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSV 717 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998776653
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-115 Score=1017.24 Aligned_cols=647 Identities=35% Similarity=0.527 Sum_probs=563.7
Q ss_pred ccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 005866 15 TVDLENIPIE--EVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANG 90 (673)
Q Consensus 15 ~~~~~~~~~~--~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 90 (673)
...+|..+.+ ++...+.++ .+||+.+|+.+|++.||.|+++..+ .+.|..|+.+|++|+.++++++++++++++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~ 99 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDW 99 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3467888888 999999887 7899999999999999999999665 67888999999999999999999999988621
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceE
Q 005866 91 GGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (673)
Q Consensus 91 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~ 170 (673)
.... .++..|+++++++++++++||+++++++++|++..+++++|+|||++++|++++|||||||+|++||+||||+
T Consensus 100 ~~~~---~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~ 176 (917)
T COG0474 100 VDAG---VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADL 176 (917)
T ss_pred cccC---cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccce
Confidence 1000 4556788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCeeEecccccCCCCcccCCC--------------CCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-C
Q 005866 171 RLLEGDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (673)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (673)
+|++++++.||||+|||||.|+.|.+ .|++|+||.+.+|.+.++|++||.+|.+|+++.++... .
T Consensus 177 rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~ 256 (917)
T COG0474 177 RLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE 256 (917)
T ss_pred EEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc
Confidence 99999998999999999999999963 58899999999999999999999999999999999888 6
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcc
Q 005866 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (673)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilv 315 (673)
..+++++.+++++.+++.+.++..++.+++.+......|...+..++++++.++|++||+.++++++.++.+|+++++++
T Consensus 257 ~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~iv 336 (917)
T COG0474 257 VKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV 336 (917)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchh
Confidence 88999999999988866555444444444433332334788899999999999999999999999999999999999999
Q ss_pred cchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCC------h---HHHHHHHHHccc--cc------ccchH
Q 005866 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD------A---DTVVLMAAQASR--TE------NQDAI 378 (673)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~------~---~~~~~~~~~~~~--~~------~~~~~ 378 (673)
|+++++|+||++++||||||||||+|+|+|.+++...-..+.+ . ..++..++.|+. .. ..||.
T Consensus 337 r~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdpt 416 (917)
T COG0474 337 RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPT 416 (917)
T ss_pred hccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCcc
Confidence 9999999999999999999999999999999977542011111 1 123343344432 11 46899
Q ss_pred HHHHHhhcCC------hHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccC-------ChHHHH
Q 005866 379 DAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN-------KSDIER 445 (673)
Q Consensus 379 ~~a~~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~-------~~~~~~ 445 (673)
|.|++.++.+ ....+..+++++.+||+|++|||+++++..+|+++.++|||||.|+++|+. .++.++
T Consensus 417 E~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~ 496 (917)
T COG0474 417 EGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496 (917)
T ss_pred HHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHH
Confidence 9999987643 333445567799999999999999999977777999999999999999974 345678
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCCC----CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHH
Q 005866 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRK----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (673)
Q Consensus 446 ~~~~~~~~~~~~G~r~l~~a~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~ 521 (673)
.+....++|+++|+|++++|||.++..+. +..|++|+|+|+++|+||||++++++|+.|+++||++||+|||++.|
T Consensus 497 ~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~T 576 (917)
T COG0474 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVET 576 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHH
Confidence 89999999999999999999998766544 56899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHh
Q 005866 522 GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601 (673)
Q Consensus 522 a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~ 601 (673)
|+++|++||+..+.....++.|.+++. +.+.++.+.+++..||||++|+||.++|+.+|++|++|+|+|||+||+||||
T Consensus 577 A~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk 655 (917)
T COG0474 577 AIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALK 655 (917)
T ss_pred HHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHH
Confidence 999999999876533344777888765 4455788888899999999999999999999999999999999999999999
Q ss_pred hCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 602 KADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 602 ~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
+|||||||| +|+|+||+|||+++++++|..++.++.+||++|.|+++++.|.+++|++.+++++
T Consensus 656 ~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~ 720 (917)
T COG0474 656 AADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLL 720 (917)
T ss_pred hcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 7999999999999999999999999999999999999999999999999766543
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=6.2e-114 Score=1013.08 Aligned_cols=641 Identities=29% Similarity=0.439 Sum_probs=545.6
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Q 005866 14 ETVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (673)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 91 (673)
|-.+||..+++++++.|+++ .+|||++|+++|+++||+|+++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 34589999999999999999 5899999999999999999999876 567888999999999999999999999874
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 005866 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (673)
Q Consensus 92 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ 171 (673)
+|.+++.|+++++++++++++||+++++++++|+++.+++++|+|||++++|++++|||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeEecccccCCCCcccCCCC---------------CeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-
Q 005866 172 LLEGDPLKIDQSALTGESLPVTKGPG---------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN- 235 (673)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~---------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~- 235 (673)
|++++.|.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|.+|+|.+++.+..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998899999999999999999642 57899999999999999999999999999998875421
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHH
Q 005866 236 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280 (673)
Q Consensus 236 -----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (673)
.++|+|+.+++++.++..+.++..++.+++.+ . ..+...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHH
Confidence 13899999999987754433332222222211 1 112345566
Q ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeee---c--c-
Q 005866 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV---F--T- 354 (673)
Q Consensus 281 ~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~---~--~- 354 (673)
.++++++++|++||+.++++++++++||++++++||++.++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 788999999999999999999999999999999999999999999999999999999999999999875421 0 0
Q ss_pred --cCC---------------------------------------C-h--------HHHHHHHHHcccc------------
Q 005866 355 --KGV---------------------------------------D-A--------DTVVLMAAQASRT------------ 372 (673)
Q Consensus 355 --~~~---------------------------------------~-~--------~~~~~~~~~~~~~------------ 372 (673)
.++ + + ..++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 0 1234444444321
Q ss_pred cccchHHHHHHhhcCChH----------HH-------------------hccCcEEEEecCCCCCceEEEEEEcCCC-eE
Q 005866 373 ENQDAIDAAIVGMLADPK----------EA-------------------RAGIQEVHFLPFNPTDKRTALTYIDNAG-KM 422 (673)
Q Consensus 373 ~~~~~~~~a~~~~~~~~~----------~~-------------------~~~~~~~~~~~f~~~~~~~~v~~~~~~g-~~ 422 (673)
..+||.|.|++.++...+ .. +..++.+..+||+|++|||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 125899999987642110 11 2246788999999999999999886544 57
Q ss_pred EEEEeCcHHHHHHhccCC------------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC------------CCCCC
Q 005866 423 HRVSKGAPEQILNLAHNK------------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR------------KDSPG 478 (673)
Q Consensus 423 ~~~~kGa~e~i~~~~~~~------------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------------~~~~e 478 (673)
++|+|||||.|+++|+.. ++.++.+.+.+++|+++|+||+++||+.++..+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 889999999999999631 234667888899999999999999999886532 23457
Q ss_pred CCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--------CCcccccccccccc
Q 005866 479 GPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSALLGQDKDESI 550 (673)
Q Consensus 479 ~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--------~~~~~~~~~~~~~~ 550 (673)
++|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.||.++|+++||..+.. ...++.|.+++. +
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-L 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-c
Confidence 8999999999999999999999999999999999999999999999999999964311 234667776654 4
Q ss_pred CCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCCh
Q 005866 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 629 (673)
Q Consensus 551 ~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~ 629 (673)
++.+++++.....||||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+++|+++||+++++|+|
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 556677788888899999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 630 SVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 630 ~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
++|+.++.+||++|+||++++.|.+++|++.+++++
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~ 827 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLI 827 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999998887644
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.5e-113 Score=996.92 Aligned_cols=634 Identities=29% Similarity=0.461 Sum_probs=555.5
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005866 16 VDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 94 (673)
...|+.+.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++|+++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 34688999999999999989999999999999999999998875 57788999999999999999999999874
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEE------CCEEEEEeCCCCCCCcEEEEcCCCeeec
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR------DGRWNEQDASILVPGDIISIKLGDIIPA 168 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r------~g~~~~i~~~~Lv~GDiI~l~~G~~vPa 168 (673)
+|.+++.|+++++++.++++++|++++++.++|+++.+++++|+| ||++++|++++|+|||+|.|++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 788888999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred eEEEEecCCeeEecccccCCCCcccCCCCC-------------eeeecceeeeCeEEEEEEEecccccccchhhhhcccC
Q 005866 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN 235 (673)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~ 235 (673)
||+|++|+++.||||+|||||.|+.|.+++ ++|+||.+.+|.++++|++||.+|.+|++.+++.+..
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999988899999999999999998864 6999999999999999999999999999999988766
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcc
Q 005866 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (673)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilv 315 (673)
+++++++.++++++++..+.++.+.+.+++++ +...+|..++..++++++++|||+||++++++++.++++|+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMING-LMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHH-HhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 67899999999988765544433333333222 23456777888899999999999999999999999999999999999
Q ss_pred cchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--HH
Q 005866 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--KE 391 (673)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~~~~--~~ 391 (673)
|+++++|+||++|++|||||||||+|+|++.+.. . ..+.+.++++.+++..+.. ...||++.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 9999999999999999999999999999998743 1 1233455566655543332 23589999998876432 12
Q ss_pred HhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeE
Q 005866 392 ARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLRS 461 (673)
Q Consensus 392 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r~ 461 (673)
.+..++.++.+||+|++|+|++++.+.++.++.++||+||.++++|++. ++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 3346778899999999999999887656667889999999999999642 234556788889999999999
Q ss_pred EEEEEeecCCCCC---CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC
Q 005866 462 LAVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 538 (673)
Q Consensus 462 l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~ 538 (673)
+++||++++..+. +..|++|+|+|+++|+||+|||++++|++|+++|++++|+|||++.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998765432 12477899999999999999999999999999999999999999999999999999963 3
Q ss_pred ccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHh
Q 005866 539 SALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (673)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~ 618 (673)
.++.|.+++. +++.++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 4677776654 556678888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 619 aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
+||+||++|||+.|+.++++||++|+||+|++.|.++.|+..++++.
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~ 683 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVL 683 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999998877543
No 9
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-112 Score=904.38 Aligned_cols=648 Identities=26% Similarity=0.397 Sum_probs=538.4
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccchHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCC
Q 005866 22 PIEEVFENLRCS-REGLSS--QAAEERLSIFGYNKLEEKKESKFL-KFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPD 96 (673)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~~--~~~~~r~~~~G~N~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~il~~~~~~~~-~~~~~ 96 (673)
.+++++++|+++ ..||+. +|..+|++.||.|.+|+++++.|+ ..|+.+.+...+++.+++++++.+++.. +.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 499999999999 689986 889999999999999998876654 5578888888889999999999998753 44679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-hcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 97 WQDFVGIITLLVINSTISFIEENNAGNAAAALMA-RLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 97 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
|++++.|++.+++..+...+.+|+.+++.+.|++ ..+.++.|+|||+.++|+..||+||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998877665555566666666666666653 335678999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCC--CCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHH-
Q 005866 176 DPLKIDQSALTGESLPVTKGP--GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFC- 251 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~--~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~- 251 (673)
++|.+|||++||||.++.|.+ +.++++||++.+|.++++|+.+|.+|..|++..++... ..++|+|-++++++...
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 56899999999999999999999999999999888776 48899998888775432
Q ss_pred ---HHHHHHHHHHHHHHHhhcc-----C---Ccchh----hHHH----HHHHHHhhcCCcchHHHHHHHHHHHHHHhcCC
Q 005866 252 ---ICSIAVGMIVEIIVMYPIQ-----D---REYRP----GIDN----LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (673)
Q Consensus 252 ---~~~i~~~~~~~~~~~~~~~-----~---~~~~~----~~~~----~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~g 312 (673)
..+.++. ++.++..|... + ..+.. .+.. .+.++++++|++||+++++++++++++|.+++
T Consensus 342 k~Gl~~A~~~-~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~ 420 (1034)
T KOG0204|consen 342 KIGLLFAALT-FIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDN 420 (1034)
T ss_pred HHHHHHHHHH-HHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcch
Confidence 1111111 11122222211 1 12221 1222 23357789999999999999999999999999
Q ss_pred CcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeeccc--------CCChHH--HHHHHH-Hcc-----------
Q 005866 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK--------GVDADT--VVLMAA-QAS----------- 370 (673)
Q Consensus 313 ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~--------~~~~~~--~~~~~~-~~~----------- 370 (673)
.++|+++++|+||+.++||+|||||||.|+|+|.+.++..... ..++.. ++.... ..+
T Consensus 421 ~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g 500 (1034)
T KOG0204|consen 421 NLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGG 500 (1034)
T ss_pred hHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCC
Confidence 9999999999999999999999999999999998866532111 122221 111111 110
Q ss_pred --cccccchHHHHHHhhc----CChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----
Q 005866 371 --RTENQDAIDAAIVGML----ADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK---- 440 (673)
Q Consensus 371 --~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~---- 440 (673)
....++|.+.|++++. .+....|.....++.+||+|.+|+|+++++.+++..|.++|||+|.++..|+..
T Consensus 501 ~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~ 580 (1034)
T KOG0204|consen 501 EQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSN 580 (1034)
T ss_pred cCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCC
Confidence 1122578999998764 345566778889999999999999999999776663499999999999999752
Q ss_pred -------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC-----C---CCCCCCCeEEEEEecccCCCCcchHHHHHHHH
Q 005866 441 -------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEG-----R---KDSPGGPWQFMGLMPLFDPPRHDSAETIRRAL 505 (673)
Q Consensus 441 -------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-----~---~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~ 505 (673)
++-...+...++.|+++|+|++|+||+++... + .+..+.+|+++|+++++||+|||++++|+.|+
T Consensus 581 g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq 660 (1034)
T KOG0204|consen 581 GELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQ 660 (1034)
T ss_pred CCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHH
Confidence 24455789999999999999999999985432 1 13567889999999999999999999999999
Q ss_pred hCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCC
Q 005866 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKH 585 (673)
Q Consensus 506 ~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~ 585 (673)
+|||+|.|+||||..||++||.+|||..+..+...+.|.++. .++++++++++.+.+|+||.+|.||..+|+.++++|+
T Consensus 661 ~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~ 739 (1034)
T KOG0204|consen 661 RAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGE 739 (1034)
T ss_pred HcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCc
Confidence 999999999999999999999999998876666788898887 4788899999999999999999999999999999999
Q ss_pred EEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccee-eee
Q 005866 586 ICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGS-ALT 663 (673)
Q Consensus 586 ~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~-~~~ 663 (673)
+|+++|||+||+|||+.||||.||| .|+++|||+||+||+||||++|++++.|||+.|.||+||++|.++-|+.. ++.
T Consensus 740 VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~ 819 (1034)
T KOG0204|consen 740 VVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVN 819 (1034)
T ss_pred EEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhh
Confidence 9999999999999999999999999 89999999999999999999999999999999999999999999887754 558
Q ss_pred eeccccCC
Q 005866 664 FNKNVSES 671 (673)
Q Consensus 664 ~~~~~~~~ 671 (673)
|++|++.+
T Consensus 820 fv~A~~~~ 827 (1034)
T KOG0204|consen 820 FVSACATG 827 (1034)
T ss_pred hhhhhhcC
Confidence 99988765
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=6.2e-110 Score=982.54 Aligned_cols=648 Identities=25% Similarity=0.386 Sum_probs=549.4
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-
Q 005866 15 TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGG- 91 (673)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~- 91 (673)
.+++|..+.++++++|+++ .+|||++|+++|+++||+|+++++++ ++|+.|+++|++|++++++++++++++.....
T Consensus 14 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~ 93 (997)
T TIGR01106 14 EMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQA 93 (997)
T ss_pred cCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999999 67999999999999999999988664 57788999999999999999999987753211
Q ss_pred -----CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCee
Q 005866 92 -----GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (673)
Q Consensus 92 -----~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~v 166 (673)
.....|++++++++++++++++++++++++++.++++++..+++++|+|||++++|++++|||||+|.|++||+|
T Consensus 94 ~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 94 STEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEE
Confidence 122468888888899999999999999999999999998889999999999999999999999999999999999
Q ss_pred eceEEEEecCCeeEecccccCCCCcccCCCCC----------eeeecceeeeCeEEEEEEEecccccccchhhhhccc-C
Q 005866 167 PADARLLEGDPLKIDQSALTGESLPVTKGPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (673)
Q Consensus 167 PaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (673)
||||+|++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++++. .
T Consensus 174 PaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 174 PADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 99999999987899999999999999998763 799999999999999999999999999999988765 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcc
Q 005866 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (673)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilv 315 (673)
+++++++.++++..++....++..++.++++ ...+..|...+..++++++++|||+||++++++++.++++|+++|+++
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilv 332 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 332 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEe
Confidence 6789999999988775544433333333322 233456777888888899999999999999999999999999999999
Q ss_pred cchhhhhhhcCceEEEecccCccccCceEeeeeeeee--cc-c--------CCCh-----HHHHHHHHHcccc-------
Q 005866 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV--FT-K--------GVDA-----DTVVLMAAQASRT------- 372 (673)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~--~~-~--------~~~~-----~~~~~~~~~~~~~------- 372 (673)
|+++++|+||+++++|||||||||+|+|+|.++++.. +. . ..+. +.++..++.++..
T Consensus 333 k~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~ 412 (997)
T TIGR01106 333 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQE 412 (997)
T ss_pred cCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccC
Confidence 9999999999999999999999999999998876421 00 0 0111 1344444444321
Q ss_pred --------cccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcC---CCeEEEEEeCcHHHHHHhc
Q 005866 373 --------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRVSKGAPEQILNLA 437 (673)
Q Consensus 373 --------~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~g~~~~~~kGa~e~i~~~~ 437 (673)
..++|.|.|++.++. +....+..++.++.+||+|++|||++++... ++++++|+|||||.|+++|
T Consensus 413 ~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 125789999987753 2334456788899999999999998877532 2467899999999999999
Q ss_pred cC----------ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC--------C---CCCCCeEEEEEecccCCCCcc
Q 005866 438 HN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK--------D---SPGGPWQFMGLMPLFDPPRHD 496 (673)
Q Consensus 438 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr~~ 496 (673)
+. +++.++.+.+.+++++++|+||+++||+.++.++. + ..|++|+|+|+++++||||++
T Consensus 493 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 493 SSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred hHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 63 12446678888999999999999999998865321 1 127899999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccccccccccCCcc
Q 005866 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLGQDKDESIAALP 554 (673)
Q Consensus 497 ~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~~~~~~~~~~~~ 554 (673)
++++|+.|+++|++++|+|||++.+|.++|+++|+..+... ..++.|.+++. +.+.+
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~e 651 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQ 651 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHH
Confidence 99999999999999999999999999999999999643210 13566666654 44556
Q ss_pred HHHHhhhcC--EEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhH
Q 005866 555 IDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 631 (673)
Q Consensus 555 ~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~ 631 (673)
+++.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||+||+|||++|||||||| +|+++|+++||++|++|||++
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 777777665 99999999999999999999999999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Q 005866 632 IISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664 (673)
Q Consensus 632 i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 664 (673)
|++++++||++|.|+++++.|.++.|++.++++
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 764 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 764 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999876654
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=5.2e-110 Score=980.92 Aligned_cols=639 Identities=25% Similarity=0.402 Sum_probs=540.5
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 005866 22 PIEEVFENLRCS-REGLS--SQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (673)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~--~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~------~ 91 (673)
+.++++++|+++ ++||| ++|+++|+++||+|+++.+++ ++|..|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999 67999 999999999999999999876 5667889999999999999999999987632 2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh-cCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceE
Q 005866 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMAR-LAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (673)
Q Consensus 92 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~ 170 (673)
++..+|++++.|+++++++.+++++++++++++.+++++. .+++++|+|||++++|++++|+|||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345799999988889999999999999999999998764 467899999999999999999999999999999999999
Q ss_pred EEEecCCeeEecccccCCCCcccCCCCCe--eeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHHH
Q 005866 171 RLLEGDPLKIDQSALTGESLPVTKGPGDG--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (673)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (673)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+|++.+++..+.+++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999667999999999999999998765 9999999999999999999999999999998887766779999999888
Q ss_pred HHHHHHHHHHHHHHHHHH---hhcc---C---------CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCC
Q 005866 249 NFCICSIAVGMIVEIIVM---YPIQ---D---------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (673)
Q Consensus 249 ~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gi 313 (673)
.++..+.++.+++.++++ +... . .++...+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 765433222222222111 1111 1 135556778889999999999999999999999999999999
Q ss_pred cccchhhhhhhcCceEEEecccCccccCceEeeeeeeeec--c-cC----CC--hHHHHHHHHHcccc------------
Q 005866 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF--T-KG----VD--ADTVVLMAAQASRT------------ 372 (673)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~----~~--~~~~~~~~~~~~~~------------ 372 (673)
++|+++++|+||+++++|||||||||+|+|.+.+++.... . .+ .+ ..+++..++.++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999988654211 0 00 01 11222222222111
Q ss_pred cccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC--------
Q 005866 373 ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-------- 440 (673)
Q Consensus 373 ~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-------- 440 (673)
..+||.|.|++.++. +....+..++.++.+||++++|+|++++..++++++.++|||||.+++.|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125789999988753 22233445677888999999999999988766778999999999999999641
Q ss_pred --hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC---CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEc
Q 005866 441 --SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (673)
Q Consensus 441 --~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~T 515 (673)
.+.++.+.+.+++++++|+|++++||++++.++. +..|++|+|+|+++|+||+||+++++|+.||++|++++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0134667888899999999999999999864432 23478899999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCC
Q 005866 516 GDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (673)
Q Consensus 516 GD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~N 595 (673)
||++.||.++|+++||..+ +..++.|.+++. +..+++++++.+..||||++|+||.++|+.+|++|++|+|+|||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999743 235677777654 4556788888899999999999999999999999999999999999
Q ss_pred CHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 596 D~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|+|||++|||||||| +|+|+|+++||+++++|+|++|++++++||++|+||++++.|.+++|++.++.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~ 748 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVIL 748 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999999999999977554
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=9.7e-109 Score=964.50 Aligned_cols=630 Identities=30% Similarity=0.475 Sum_probs=545.6
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-chHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 005866 16 VDLENIPIEEVFENLRCS-REGLS-SQAAEERLSIFGYNKLEEKK-ESKFLKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~-~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~~~~~~il~~~~~~~~ 91 (673)
.+||.++++++++.|+++ .+||| .+|+++|+++||+|+++.++ +++|..|+++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 368999999999999999 67999 89999999999999999876 56778899999 8999999999999999875
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 005866 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (673)
Q Consensus 92 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ 171 (673)
.|.+++.|+++++++..+++++|+++++.+++|++..+++++|+|||++++|++++|||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 7888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeEecccccCCCCcccCCCC--------------CeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CC
Q 005866 172 LLEGDPLKIDQSALTGESLPVTKGPG--------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQ 236 (673)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~--------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~ 236 (673)
|++|+.+.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|++||.+|.+|++.+++++. ..
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 99998779999999999999999886 3899999999999999999999999999999998876 55
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCccc
Q 005866 237 VGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (673)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk 316 (673)
++++++.+++++.++..+.++.+++.+++.| +.+.+|...+...+++++++|||+||++++++++.+++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7899999999988765433332333333333 245567788888999999999999999999999999999999999999
Q ss_pred chhhhhhhcCceEEEecccCccccCceEeeeeeeeec-c---c--CC-----------------C--hHHHHHHHHHccc
Q 005866 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF-T---K--GV-----------------D--ADTVVLMAAQASR 371 (673)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~---~--~~-----------------~--~~~~~~~~~~~~~ 371 (673)
+++++|+||++|++|||||||||+|+|++.+++.... . . +. + ..+++..++.++.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999988653110 0 0 00 0 1223334443332
Q ss_pred c--------cccchHHHHHHhhcCCh--HHHhccCcEEEEecCCCCCceEEEEEEc-CCCeEEEEEeCcHHHHHHhccCC
Q 005866 372 T--------ENQDAIDAAIVGMLADP--KEARAGIQEVHFLPFNPTDKRTALTYID-NAGKMHRVSKGAPEQILNLAHNK 440 (673)
Q Consensus 372 ~--------~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~f~~~~~~~~v~~~~-~~g~~~~~~kGa~e~i~~~~~~~ 440 (673)
. ..+||++.|++.++... ...+..++.++.+||++.+|||++++.. .+++++.++||+||.++..|+..
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 12469999998875422 2233467889999999999999998875 35678899999999999999631
Q ss_pred -----------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC
Q 005866 441 -----------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV 509 (673)
Q Consensus 441 -----------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi 509 (673)
++.++.+.+.+++++++|+|++++||+++ +.+|+|+|+++|+||+|||++++|+.|+++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 23456677888899999999999999975 35689999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEE
Q 005866 510 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (673)
Q Consensus 510 ~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~ 589 (673)
+++|+|||+..+|.++|+++|+... ....+.|.+++. +++.++++.+.+..||||++|+||.++|+.+|+.|+.|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999753 234566666653 5566788888999999999999999999999999999999
Q ss_pred ECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Q 005866 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664 (673)
Q Consensus 590 iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 664 (673)
+|||.||+|||++|||||+|| +|+++++++||+++++|||+.++.++++||++|+||++++.|.++.|+..++++
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~ 698 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLI 698 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 999999999999999999999 799999999999999999999999999999999999999999999998877543
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=4.2e-104 Score=938.99 Aligned_cols=617 Identities=23% Similarity=0.282 Sum_probs=505.9
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005866 34 REGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (673)
Q Consensus 34 ~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 113 (673)
..|||.+|+++|+++||+|+++.+.+++|..|++++++|++++++++++++++ . .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~-~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLL-D------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHh-h------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888888899999999998777776555443 2 3688888999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEc--CCCeeeceEEEEecCCeeEecccccCCCCc
Q 005866 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (673)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~--~G~~vPaD~~ll~g~~l~Vdes~LTGEs~p 191 (673)
.+++++++.++++++. ..++.++|+|||+|++|++++|+|||+|.|+ +|++|||||+|++|+ +.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~-~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMV-HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhh-cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc
Confidence 9999999998888754 4577899999999999999999999999999 999999999999997 58999999999999
Q ss_pred ccCCCC------------------Ceeeecceeee-------CeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHH
Q 005866 192 VTKGPG------------------DGVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLT 245 (673)
Q Consensus 192 v~k~~~------------------~~v~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~ 245 (673)
+.|.+. +++|+||.+.+ |.+.++|++||.+|..|++.+++..+ ....++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999752 35999999985 78999999999999999999888765 44567777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhc
Q 005866 246 AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (673)
Q Consensus 246 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg 325 (673)
++..+++.+.+++++.. ++.+...+.++...+..++.++++++|++||+++++++++++.||+|+|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 66555433222222221 22222335577788899999999999999999999999999999999999999999999999
Q ss_pred CceEEEecccCccccCceEeeeeeeeecccC----------CChHHHHHHHHHccc------ccccchHHHHHHhhcCCh
Q 005866 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----------VDADTVVLMAAQASR------TENQDAIDAAIVGMLADP 389 (673)
Q Consensus 326 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~ 389 (673)
++|++|||||||||+|+|.|.+++....... ..........+.|.. ...+||+|.++..+....
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988653111000 011122222233321 224789999998875311
Q ss_pred H----H--H-------------hccCcEEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhccCChHHHHHHHH
Q 005866 390 K----E--A-------------RAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHA 449 (673)
Q Consensus 390 ~----~--~-------------~~~~~~~~~~~f~~~~~~~~v~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~ 449 (673)
. . . ...+++++.+||+|++|||+++++.. +++++.++|||||.|+++|... ..++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 0 0 0 13567889999999999999998854 3567899999999999999854 46788899
Q ss_pred HHHHHHHcCCeEEEEEEeecCCC--------CCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHH
Q 005866 450 VIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (673)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~ 521 (673)
.+++|+++|+||+++|||++++. +++..|++|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------Ccccccccccc--
Q 005866 522 GKETGRRLGMGTNMYP---------------------------------------------------SSALLGQDKDE-- 548 (673)
Q Consensus 522 a~~ia~~~gi~~~~~~---------------------------------------------------~~~~~~~~~~~-- 548 (673)
|.++|+++||..+... ..++.|.+++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 00112222211
Q ss_pred ccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCC
Q 005866 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (673)
Q Consensus 549 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~ 628 (673)
...+.++.+++.++.||||++|+||.++|+.+|+.|++|+|||||+||+||||+||||||||++ |+ ..|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-da-s~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EA-SVAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cc-eeecccccCCCc
Confidence 0122346667788899999999999999999999999999999999999999999999999965 44 479999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 629 LSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 629 ~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|++++.+|++||+++.|+++++.|++..++..+++
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~ 878 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYS 878 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888777766544
No 14
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.3e-100 Score=895.69 Aligned_cols=599 Identities=30% Similarity=0.446 Sum_probs=499.2
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC
Q 005866 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD 141 (673)
Q Consensus 65 ~~~~~~~~~~~~~~~~~il~~~~~~~~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~ 141 (673)
++++|++|+.++|+++++++++++... .....|.+++.|++++++++.+++++++++++.+++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986432 22347999999999999999999999999999999999888999999999
Q ss_pred CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCC-------------Ceeeecceeee
Q 005866 142 GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DGVYSGSTCKQ 208 (673)
Q Consensus 142 g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~v~~ 208 (673)
|++++|++++|||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.++ +.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998789999999999999999875 78999999999
Q ss_pred CeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-c----CCcch----hhH
Q 005866 209 GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-Q----DREYR----PGI 278 (673)
Q Consensus 209 g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~----~~~~~----~~~ 278 (673)
|++.++|++||.+|++|++.++++.+ .+++++++.+++++.++...+++.+++.++++... . ...|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999888776 56899999999998765543333222222221111 1 11222 233
Q ss_pred HHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeec-----
Q 005866 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF----- 353 (673)
Q Consensus 279 ~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~----- 353 (673)
..++++++++||++||+++++++++++++|+++|+++|+++++|+||++++||||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 345678899999999999999999999999999999999999999999999999999999999999988653210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHcccc------------cccchHHHHHHhhcCChH------
Q 005866 354 ------TKGVD-------------------ADTVVLMAAQASRT------------ENQDAIDAAIVGMLADPK------ 390 (673)
Q Consensus 354 ------~~~~~-------------------~~~~~~~~~~~~~~------------~~~~~~~~a~~~~~~~~~------ 390 (673)
..+++ .+.++..++.|+.. ..++|.|.|++.++.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00010 11233334444321 125899999987642210
Q ss_pred --------------HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC-----------hHHHH
Q 005866 391 --------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-----------SDIER 445 (673)
Q Consensus 391 --------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-----------~~~~~ 445 (673)
..+..++.++.+||+|++|||+++++. +++++.|+|||||.|++.|++. ++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123456788999999999999999875 4668899999999999999641 23466
Q ss_pred HHHHHHHHHHH-cCCeEEEEEEeecCCCC----------CCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 005866 446 RVHAVIDKFAE-RGLRSLAVAYQEVPEGR----------KDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (673)
Q Consensus 446 ~~~~~~~~~~~-~G~r~l~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~ 514 (673)
++.+.+++|++ +|+||+++||+.++.++ ++..|++|+|+|+++++||+|++++++|+.||++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78888999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCCCCCCC--CccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECC
Q 005866 515 TGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (673)
Q Consensus 515 TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGD 592 (673)
|||+..+|.++|+++|+..+... ...+.|.+++. +++.+......+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 23455655443 4444566667778899999999999999999999999999999
Q ss_pred CCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 593 g~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
|.||+|||++||||||||+|++.++++||+++.+|||+.+++++++||++|+|+++++.|.+++|++.+++++
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777544
No 15
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-99 Score=806.89 Aligned_cols=661 Identities=26% Similarity=0.414 Sum_probs=555.7
Q ss_pred chHHHHHHhhccc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHH
Q 005866 3 DKEEVLEAVLKET-VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEA 79 (673)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (673)
++.++++++++|. .+.|++|++|+.+++.++ .+|||.+++.+++.+.|+|.+++|+. +.|.+|.+|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 3556778999996 589999999999999999 89999999999999999999999884 46778999999999999999
Q ss_pred HHHHHHHHhcCC-----C-CCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCC
Q 005866 80 AAIMAIALANGG-----G-KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILV 153 (673)
Q Consensus 80 ~~il~~~~~~~~-----~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv 153 (673)
+++++++..... . +....+.+..++.+++++.+..++|+.+..+.++++.++.|+.+.|+|||+...+..++||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 999988754311 1 1223344455556677888999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCC----------CCeeeecceeeeCeEEEEEEEeccccc
Q 005866 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDGVYSGSTCKQGEIEAVVIATGVHTF 223 (673)
Q Consensus 154 ~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~----------~~~v~aGt~v~~g~~~~~V~~tG~~T~ 223 (673)
|||++.++-|++||||.+++++.++++|+|+|||||.|..+.+ .|+-|.+|.+++|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 9999999999999999999999999999999999999999976 368899999999999999999999999
Q ss_pred ccchhhhhcc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHH
Q 005866 224 FGKAAHLVDT-TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (673)
Q Consensus 224 ~g~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~ 302 (673)
+|+|+.+... ...++++++.++.+..+..... +.+.+.+|......++.|..++..++.++++.+|++|+..++.+++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vA-i~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVA-IFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHH-HHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999988766 3677888888888766533222 2222222322223367788888888889999999999999999999
Q ss_pred HHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeeccc----------------CCChHHHHHHH
Q 005866 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK----------------GVDADTVVLMA 366 (673)
Q Consensus 303 ~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~----------------~~~~~~~~~~~ 366 (673)
...+||+++++++|++.+.|+||..++||+|||||||+|+|.|.+.|++.... +.....+..++
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877532110 01112334444
Q ss_pred HHccc---------------ccccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcC---CCeEEE
Q 005866 367 AQASR---------------TENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHR 424 (673)
Q Consensus 367 ~~~~~---------------~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~g~~~~ 424 (673)
..++. ...+++.+.|+.++.. +....|...+.+..+||+|.+|+.-.+.... +.++.+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 44432 1235677888887642 3355677888889999999999987666533 356788
Q ss_pred EEeCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-----------CCCCCCeEE
Q 005866 425 VSKGAPEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQF 483 (673)
Q Consensus 425 ~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~~ 483 (673)
..|||||.++++|+. ++...+.+.+...++...|.||++++++.+++.++ .....+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 899999999999974 23567788888899999999999999998876542 234567899
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----------------------CCccc
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------------------PSSAL 541 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------------------~~~~~ 541 (673)
+|++++-||||..+|+++..||.|||+++|+|||++.||+++|++.||..... ...++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 99999999999999999999999999999999999999999999999754221 01234
Q ss_pred cccccccccCCccHHHHhhhcC--EEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHh
Q 005866 542 LGQDKDESIAALPIDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 618 (673)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~ 618 (673)
.|.++.+ ++..++++++.+.. ||||.||+||..||+.+|++|.+|+++|||+||+||||.|||||||| .|+|++|+
T Consensus 662 hG~eL~~-~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSELPD-MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred ecccccc-cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 4555443 66778888887765 99999999999999999999999999999999999999999999999 99999999
Q ss_pred hcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 619 aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
|||+||+||||++|+..+++||.+|+|+||.+.|.+++|++.+.||+
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL 787 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 787 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHH
Confidence 99999999999999999999999999999999999999999998875
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.6e-94 Score=802.20 Aligned_cols=540 Identities=24% Similarity=0.347 Sum_probs=441.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHhHHHHHHHHHHhcCC-eeE
Q 005866 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIITLLVINSTISFIE----ENNAGNAAAALMARLAP-KGK 137 (673)
Q Consensus 67 ~~~~~~~~~~~~~~~il~~~~~~~~~--~~~~~--~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~ 137 (673)
.++++|+.|+++++++++++++.... ....| ++.+.|.++++++.++..++ |+|++++.++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 56789999999999999998764311 11112 34555666666666665555 78888999999988876 675
Q ss_pred -EEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCC---CeeeecceeeeCeEEE
Q 005866 138 -VLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEA 213 (673)
Q Consensus 138 -V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~---~~v~aGt~v~~g~~~~ 213 (673)
|.|||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999987 8999999999999999999 8899999999999999
Q ss_pred EEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCc
Q 005866 214 VVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIA 292 (673)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~ 292 (673)
+|+++|.+|.+||+.++++++ .+++|++.....+...+.. +++.++++ + ++......+...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~~~-~-~~~~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVILT-M-YPLAKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHHHH-H-HHHHhhccHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999887 4678888655444322211 11111111 1 111111133345566677888999999
Q ss_pred chHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccc
Q 005866 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT 372 (673)
Q Consensus 293 l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (673)
||..++++...++.||+|+|+++|+.+++|++|++|++|||||||||+|++.+.... +. .+.+.++++..+..++.
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~- 339 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI- 339 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999999999999999999887765532 22 23445566666655543
Q ss_pred cccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCCh-HHHHHHHHHH
Q 005866 373 ENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVI 451 (673)
Q Consensus 373 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~~~ 451 (673)
.+.||++.|++.++...... ......+.+||++++++|++.+ +|+ .+.||+++.++++|.... ..+..+.+..
T Consensus 340 ~s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 340 ADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred CCCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 34579999998875321100 0011234689999999998864 243 455999999999987421 2334566677
Q ss_pred HHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 005866 452 DKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (673)
Q Consensus 452 ~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi 531 (673)
++++++|+|+++++.. ++++|+++++||+|||++++|++||++|++++|+|||++.||.++|+++|+
T Consensus 414 ~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 8899999999998743 389999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 532 GTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
. ++|||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 5 3799999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 612 ~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|+|+||++||+|++||||+.|++++++||++|.|+++++.|.+++|++..++
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~ 582 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFA 582 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHH
Confidence 9999999999999999999999999999999999999999999999987664
No 17
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.6e-92 Score=784.19 Aligned_cols=522 Identities=25% Similarity=0.336 Sum_probs=437.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-eeEE
Q 005866 67 GFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAP-KGKV 138 (673)
Q Consensus 67 ~~~~~~~~~~~~~~~il~~~~~~~~----~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V 138 (673)
.||++|+.++++++++++++++... +. ...|...+.+++.+++..+++.++++|+++..++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 6788999999999999999886421 11 12233334455556677788889999999999999988775 6999
Q ss_pred EECCE-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCe---eeecceeeeCeEEEE
Q 005866 139 LRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIEAV 214 (673)
Q Consensus 139 ~r~g~-~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~~~ 214 (673)
+|||+ +++|++++|+|||+|.+++||+|||||+|++|.. .||||+|||||.|+.|.+|+. +|+||.+.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 9999999999999999999999999999999985 899999999999999999988 999999999999999
Q ss_pred EEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcc
Q 005866 215 VIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAM 293 (673)
Q Consensus 215 V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l 293 (673)
|+++|.+|.+|++.++++++ .+++|++...+.+..++...+++.++..+++.+ +.+.. ..+..++++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~-~~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA-YSGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999887 567888877776655443322222222222212 12222 367778889999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHccccc
Q 005866 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTE 373 (673)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (673)
+..+++....++.||+|+|+++|+.+++|+||++|++|||||||||+|+|.+.+.+ +. .+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999998753 22 3456666777666665544
Q ss_pred ccchHHHHHHhhcCCh---HHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC-hHHHHHHHH
Q 005866 374 NQDAIDAAIVGMLADP---KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVHA 449 (673)
Q Consensus 374 ~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~ 449 (673)
.||.+.+++.++... ......++..+.+||++.++++++.+ +| ..+.||++|.+++.|... ...++++.+
T Consensus 342 -~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 -ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred -CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 468999998775431 11111234567889999888777643 24 467899999999998542 234567788
Q ss_pred HHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 005866 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (673)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~ 529 (673)
.+++++++|+|++++|++. +++|+++++||+|||++++|++||++|++++|+|||++.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999753 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 530 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
|++ +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 995 37999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHH
Q 005866 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 644 (673)
Q Consensus 610 ~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~ 644 (673)
|+|+|+||++||+|++||||+.+++++++||++.-
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~ 567 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLM 567 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999763
No 18
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=4.2e-91 Score=830.47 Aligned_cols=605 Identities=20% Similarity=0.262 Sum_probs=481.0
Q ss_pred cCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 005866 49 FGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNA 124 (673)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 124 (673)
|.+|.+.+.+|++| +.|++||.++.+++|++++++++++... +...+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s--~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS--PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC--CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 68899999999886 6789999999999999999999985432 22345666788888889999999999999999
Q ss_pred HHHHHHhcCCeeEEEEC-CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCC----eeEecccccCCCCcccCCC---
Q 005866 125 AAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGP--- 196 (673)
Q Consensus 125 ~~~l~~~~~~~~~V~r~-g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~--- 196 (673)
.++. +++.++|+|+ |+++++++++|+|||+|.|++||+||||++|++++. +.||||+|||||.|+.|.+
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8654 4678999997 899999999999999999999999999999998543 6899999999999998853
Q ss_pred ---------------------------------------------CCeeeecceeee-CeEEEEEEEecccccccchhhh
Q 005866 197 ---------------------------------------------GDGVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (673)
Q Consensus 197 ---------------------------------------------~~~v~aGt~v~~-g~~~~~V~~tG~~T~~g~i~~~ 230 (673)
.|++|+||.+.+ |.+.|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 146789999998 899999999999999876322
Q ss_pred hcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----Ccc---------------hhhHHHHHHHHHhhcCC
Q 005866 231 VDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQD----REY---------------RPGIDNLLVLLIGGIPI 291 (673)
Q Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~ll~~~iP~ 291 (673)
....+.+++++.++++..+++.+.++.+++.+++...+.. ..| ...+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2235678999999999876554433333333332211111 012 11456678888999999
Q ss_pred cchHHHHHHHHHHH------HHHhcC----CCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccC-----
Q 005866 292 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----- 356 (673)
Q Consensus 292 ~l~~~~~~~~~~~~------~~l~~~----gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----- 356 (673)
+||+.+++++..++ .+|.++ ++++|+.+.+|+||++++||+|||||||+|+|.+.++.+.....+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 778764 599999999999999999999999999999999998765311000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHccc-------c-------cccchH
Q 005866 357 --------V--------------------D----------------ADTVVLMAAQASR-------T-------ENQDAI 378 (673)
Q Consensus 357 --------~--------------------~----------------~~~~~~~~~~~~~-------~-------~~~~~~ 378 (673)
. + ..+.+..++.|.. . ...+|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 0112222222221 1 135799
Q ss_pred HHHHHhhcCChH------------------HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccC-
Q 005866 379 DAAIVGMLADPK------------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN- 439 (673)
Q Consensus 379 ~~a~~~~~~~~~------------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~- 439 (673)
|.|++.++...+ .....++.++.+||+|++|||+++++++++++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999987642211 0123577888999999999999999988888899999999999999975
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCeEEEEEecccCCCC
Q 005866 440 KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPR 494 (673)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~D~lr 494 (673)
.++.++.+.+.+++|+.+|+||+++|||.+++++. +..|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 33456778899999999999999999999875421 23588999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC------------------------------------
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------------------------------ 538 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~------------------------------------ 538 (673)
++++++|+.|+++||++||+|||+.+||.++|++||+..+....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997543211
Q ss_pred ---ccccccccccccCCc---cHHHHhhhcC--EEEecChhhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 539 ---SALLGQDKDESIAAL---PIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 539 ---~~~~~~~~~~~~~~~---~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
.++.|..++...+.. .+.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 123333332222211 2333445555 99999999999999999998 99999999999999999999999988
Q ss_pred c--cccHHHHhhcCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 610 ~--~~~~~a~~aad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
. +|. .|+.+||+++.+ |+.+.+++ .+||++|+|+++++.|.||+|++++++
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~ 847 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAII 847 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 333 477899999975 99999998 889999999999999999999987765
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-90 Score=749.50 Aligned_cols=607 Identities=24% Similarity=0.341 Sum_probs=472.7
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHH
Q 005866 25 EVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGII 104 (673)
Q Consensus 25 ~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii 104 (673)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..+||.. |.+.+++.|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYl-FQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYL-FQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHHH-HHhHHhhhhhcc------cchhhhhHHH
Confidence 344444455789999999999999999999999999999999999999954 444444434321 2445555666
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcC-CCeeeceEEEEecCCeeEecc
Q 005866 105 TLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL-GDIIPADARLLEGDPLKIDQS 183 (673)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~-G~~vPaD~~ll~g~~l~Vdes 183 (673)
++.+.+...+.++.++..+.++++- .....|+|+|||.|++|+++|||||||+.+.+ |-..|||++|++|++ .||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeecc
Confidence 6677888889999999998888753 55678999999999999999999999999998 999999999999997 59999
Q ss_pred cccCCCCcccCCCC-------------------Ceeeecceeee------CeEEEEEEEecccccccchhhhhcccCCCC
Q 005866 184 ALTGESLPVTKGPG-------------------DGVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDTTNQVG 238 (673)
Q Consensus 184 ~LTGEs~pv~k~~~-------------------~~v~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 238 (673)
+|||||.|+.|.|- +.+|+||.+++ +.+.++|++||.+|..|++.+.+..+++ .
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP-~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP-V 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC-c
Confidence 99999999999872 47999999986 5689999999999999998887777643 2
Q ss_pred cHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCccc
Q 005866 239 HFQKVLTAIG--NFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (673)
Q Consensus 239 ~~~~~~~~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk 316 (673)
+++-.-|.+. .+..++.+++ ++..++.+...+.+....+.+++.++.+.+|+|||.+++++..++.+||.|+||+|.
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~g-fiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIG-FIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-HHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 3333333332 2211111112 222222334456777888899999999999999999999999999999999999999
Q ss_pred chhhhhhhcCceEEEecccCccccCceEeeeeeeeecc---c--------------------C-CChH-HHHHHHHHcc-
Q 005866 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT---K--------------------G-VDAD-TVVLMAAQAS- 370 (673)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~---~--------------------~-~~~~-~~~~~~~~~~- 370 (673)
+|+.+...|++|++|||||||||++.+.+..+.....+ . + ..+. .+....+.+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999999764421000 0 0 0010 1111111111
Q ss_pred -----cccccchHHHHHHhhcC------------------------ChHH-----H----hccCcEEEEecCCCCCceEE
Q 005866 371 -----RTENQDAIDAAIVGMLA------------------------DPKE-----A----RAGIQEVHFLPFNPTDKRTA 412 (673)
Q Consensus 371 -----~~~~~~~~~~a~~~~~~------------------------~~~~-----~----~~~~~~~~~~~f~~~~~~~~ 412 (673)
....+||+|..+.+... ++.. . ...+.+++.+||+|..+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 11234566544432110 0000 0 01467889999999999999
Q ss_pred EEEEcC-CCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC--------CCCCCCCCeEE
Q 005866 413 LTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQF 483 (673)
Q Consensus 413 v~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~ 483 (673)
|++..+ +.+.+.|+|||||.|.++|... .+|+++.+.++.|+.+|+|++++|+|+++.. .++..|++|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p~-tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKPE-TVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCcc-cCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999854 5678999999999999999865 6899999999999999999999999999876 26788999999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA----------------------- 540 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~----------------------- 540 (673)
+|++.||+++|++++.+|++|++|+|+++|+||||..||..+|++||+..+......
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 999999999999999999999999999999999999999999999999754320000
Q ss_pred -c-----------------------------cccccccc--cCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEE
Q 005866 541 -L-----------------------------LGQDKDES--IAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICG 588 (673)
Q Consensus 541 -~-----------------------------~~~~~~~~--~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~ 588 (673)
. .|+.++-. ...+.++.++.+..|||||+|.||.++|+.+|+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 0 00000000 012235556778889999999999999999999999999
Q ss_pred EECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHH
Q 005866 589 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQR 645 (673)
Q Consensus 589 ~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~ 645 (673)
|||||+|||.|||+|||||+++++. |.-||.+.-.-.+++.++..|++||+..-.
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVT 911 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVT 911 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhh
Confidence 9999999999999999999998643 556788888778999999999999985443
No 20
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-88 Score=755.44 Aligned_cols=504 Identities=28% Similarity=0.409 Sum_probs=437.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEE-CCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~ 174 (673)
+|.+++.++++++++..++.+...|+++++++|.++.|+++++++ ||++++||.++|+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 446677788888888888888889999999999999999997776 5659999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHH
Q 005866 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (673)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (673)
|++ .||||+|||||.|+.|.+||.||+||.+.+|.+..+|+++|.+|.+++|.++++++ .++++.|+.+|+++.++.+
T Consensus 253 G~s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 GSS-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred CcE-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 998 79999999999999999999999999999999999999999999999999999988 6789999999999999888
Q ss_pred HHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEec
Q 005866 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (673)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~D 333 (673)
.++++.++.+++|+...+.+|..++..++++++++|||+|.+++|+++..+..+.+++||++|+..++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 66555555555555555567888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEE
Q 005866 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (673)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (673)
||||||+|++.+.++. ... + ++++++.+++..+..+ .||++.|++++..+.. .......+.+| .+ ++
T Consensus 412 KTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S-~HPiA~AIv~~a~~~~--~~~~~~~~~i~-----G~-Gv 478 (713)
T COG2217 412 KTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHS-EHPLAKAIVKAAAERG--LPDVEDFEEIP-----GR-GV 478 (713)
T ss_pred CCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcC-CChHHHHHHHHHHhcC--CCCccceeeec-----cC-cE
Confidence 9999999999998754 332 2 6788888888876654 4699999998654321 11112222222 11 11
Q ss_pred EEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCC
Q 005866 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (673)
Q Consensus 414 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (673)
.- .-+|+ .+..|++..+.+.-.. ... .....+.+..+|..++.++... +++|++.++|++
T Consensus 479 ~~-~v~g~--~v~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 479 EA-EVDGE--RVLVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred EE-EECCE--EEEEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 11 11454 4445999987653211 111 4566788889999999999887 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (673)
||+++++|++||+.|++++|+|||+..+|.++|+++||+ ++++.+.|+||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHH
Confidence 999999999999999999999999999999999999995 47999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005866 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSI 653 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~ 653 (673)
.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|++|+++.++.+++.+|+++++||+++.|.
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeee
Q 005866 654 FPDLGGSALT 663 (673)
Q Consensus 654 ~~~~~~~~~~ 663 (673)
|.+|+.++..
T Consensus 669 ~~yn~~~ipl 678 (713)
T COG2217 669 FGYNAIAIPL 678 (713)
T ss_pred HHHHHHHHHH
Confidence 9888877543
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=7.6e-88 Score=747.63 Aligned_cols=538 Identities=24% Similarity=0.304 Sum_probs=442.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC---CC---CCCChhhH---HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-ee
Q 005866 67 GFMWNPLSWVMEAAAIMAIALANG---GG---KPPDWQDF---VGIITLLVINSTISFIEENNAGNAAAALMARLAP-KG 136 (673)
Q Consensus 67 ~~~~~~~~~~~~~~~il~~~~~~~---~~---~~~~~~~~---~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 136 (673)
.||.||+.++++++++++++++.. .+ ....|+++ +.+++.+++..+++.+++++++++.++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 678899999999999999987542 11 11236654 3334446778888899999999999999888776 48
Q ss_pred EEEE-CCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCe---eeecceeeeCeEE
Q 005866 137 KVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIE 212 (673)
Q Consensus 137 ~V~r-~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~ 212 (673)
+|+| ||++++|++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|++|+. +|+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8875 8999999999999999999999999999999999975 899999999999999999874 9999999999999
Q ss_pred EEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCC
Q 005866 213 AVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPI 291 (673)
Q Consensus 213 ~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 291 (673)
++|+++|.+|.+|++.++++++ .+++|+|...+.+..++..++++..+.. ..+..+.+ ....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~-~~~~~~~~--~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATL-WPFAAYGG--NAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcC--hhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 5578998777766554332222211111 11111111 122466678899999999
Q ss_pred cchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHccc
Q 005866 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR 371 (673)
Q Consensus 292 ~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (673)
+++...+.....++.||+|+|+++|+.+++|++|++|++|||||||||+|+|.+.+.+ +. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 8887777777789999999999999999999999999999999999999999998753 22 34566677777766654
Q ss_pred ccccchHHHHHHhhcCChHHH--hccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC-hHHHHHHH
Q 005866 372 TENQDAIDAAIVGMLADPKEA--RAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVH 448 (673)
Q Consensus 372 ~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~ 448 (673)
. +.||.+.+++.++.+.... ....+..+..||++.++++++.+. +| ..+.||++|.+++.|... ...+..+.
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 4 4569999998765321110 012234578899999777765433 34 467899999999887532 23456677
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 005866 449 AVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 528 (673)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~ 528 (673)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999864 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 529 LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 529 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
+|+. ++++|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9995 3799999999999999999999999999999999999999999999
Q ss_pred cccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccce
Q 005866 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGG 659 (673)
Q Consensus 609 ~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~ 659 (673)
|++|+++++++||++++||||+.+++++++||+++-+...+..|.+.++++
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999999999999998877777777766654
No 22
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=9.1e-87 Score=784.70 Aligned_cols=605 Identities=18% Similarity=0.177 Sum_probs=472.5
Q ss_pred hcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 005866 48 IFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGN 123 (673)
Q Consensus 48 ~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 123 (673)
+|..|.+.+.+|++| +.+++||.++.|++|++.++++++.... +...++..++++++++++++.+.++++++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s--~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLA--VFGRGASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcc--cCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999876 5678999999999999999999875432 2235677889999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-----cCCeeEecccccCCCCcccCCCC-
Q 005866 124 AAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVTKGPG- 197 (673)
Q Consensus 124 ~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~-----g~~l~Vdes~LTGEs~pv~k~~~- 197 (673)
+.++. ++..++|+|+|++++++|++|+|||+|+|++||+|||||+|++ |. ++||||+|||||.|+.|.++
T Consensus 164 ~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~-~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 164 SDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGV-AYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred hHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCce-EEEEccccCCeeeeeEecccc
Confidence 98764 4678999999999999999999999999999999999999998 44 58999999999999998642
Q ss_pred --------------------------------------------CeeeecceeeeC-eEEEEEEEecccccccchhhhhc
Q 005866 198 --------------------------------------------DGVYSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (673)
Q Consensus 198 --------------------------------------------~~v~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~ 232 (673)
|.+++|+.+.+. .+.|+|++||.+|+..+ +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 345666666665 59999999999998532 2222
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhc-cCC-----cc-----------------------hhhHHHH
Q 005866 233 TTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVM--YPI-QDR-----EY-----------------------RPGIDNL 281 (673)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~--~~~-~~~-----~~-----------------------~~~~~~~ 281 (673)
...+.+++++.++++..+++++.++.+++..++. |.. ... .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2357789999999987765444433333322221 111 000 00 0112233
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHhcCC----------CcccchhhhhhhcCceEEEecccCccccCceEeeeeeee
Q 005866 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE 351 (673)
Q Consensus 282 ~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~g----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 351 (673)
+.++..++|++|++.+++++...+.++.++. +.+|+.+..|+||+|++||+|||||||+|+|.+.++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 4566789999999999999988788887754 679999999999999999999999999999999988652
Q ss_pred ecccC-----------------------------C------------C-h-----HHHHHHHHHccc-------------
Q 005866 352 VFTKG-----------------------------V------------D-A-----DTVVLMAAQASR------------- 371 (673)
Q Consensus 352 ~~~~~-----------------------------~------------~-~-----~~~~~~~~~~~~------------- 371 (673)
....+ . + + .+.+...+.|..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 0 0 0 112222222211
Q ss_pred -----ccccchHHHHHHhhcCCh----------------HHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcH
Q 005866 372 -----TENQDAIDAAIVGMLADP----------------KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAP 430 (673)
Q Consensus 372 -----~~~~~~~~~a~~~~~~~~----------------~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~ 430 (673)
....+|.+.|++.++... ...+..++.++.+||+|+||||+++++++++++++|+||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 111368899998765322 12345788999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCeEE
Q 005866 431 EQILNLAHNK--SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQF 483 (673)
Q Consensus 431 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~ 483 (673)
|.|+++|... .+.++.+.+.+++|+++|+|||++|||.+++.+. +..|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999753 3456778899999999999999999999975421 245899999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA----------------------- 540 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~----------------------- 540 (673)
+|+++++|++|++++++|+.|+++|+++||+|||+..||.++|++||+..+......
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 999999999999999999999999999999999999999999999999754321111
Q ss_pred ------------------------ccccccccccC---CccHHHHhhhcC--EEEecChhhHHHHHHHHhhC-CCEEEEE
Q 005866 541 ------------------------LLGQDKDESIA---ALPIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMT 590 (673)
Q Consensus 541 ------------------------~~~~~~~~~~~---~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-g~~v~~i 590 (673)
+.|..++...+ ...+.++..++. ||||++|.||.++|+.+|+. +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 11111111111 122344455555 79999999999999999987 5799999
Q ss_pred CCCCCCHHHHhhCCeeEEc-c-cccHHHHhhcCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 591 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 591 GDg~ND~~al~~AdvGia~-~-~~~~~a~~aad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|||+||++||++|||||++ | +|.+ |..+||+.+.. |..+.+++ .+||+.|+|+.+++.|.||+|+.+.++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~q-A~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~ 950 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQ-AVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLV 950 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHH-HHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 4 5666 45599999965 99999997 589999999999999999999998876
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.3e-82 Score=726.49 Aligned_cols=498 Identities=26% Similarity=0.346 Sum_probs=433.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
.|.+++.++++++++..++.++++|+++.+++|++..|++++|+|||++++|++++|+|||+|+|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 46777888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
+. .||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|.+++|.++++++ .+++++++.+++++.++.+.
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 56899999999999998776
Q ss_pred HHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecc
Q 005866 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DK 334 (673)
+++..++.+++|+.+.+.+|..++...+++++++|||+|.+++|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66655555555545556678888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEE-E
Q 005866 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTA-L 413 (673)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-v 413 (673)
|||||+|+|+|.+.. .+ .+.++++++.+++..+. .+.||++.|++++..+. +. .+||.++.+.+. .
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e~-~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVEQ-GSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998753 22 24567777777765543 45689999999875321 11 146666555543 1
Q ss_pred EEE-cCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCC
Q 005866 414 TYI-DNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492 (673)
Q Consensus 414 ~~~-~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 492 (673)
-+. ..+|+.+. .|+++.+.+. .+.+...++.+..+|+|+++++++. +++|++.|+|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~~-------~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPPL-------ADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhhc-------cHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 122 22455444 4899887541 2234455678899999999999865 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
+|||++++|+.|++.|++++|+|||+..++..+|+++||. .+++.+|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 367889999
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVS 652 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~ 652 (673)
|.++|+.+|+. +.|+|+|||.||+|||+.|||||+||+|++.++++||++++++++..++.++++||++++||++++.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhcccceee
Q 005866 653 IFPDLGGSA 661 (673)
Q Consensus 653 ~~~~~~~~~ 661 (673)
.+..|+..+
T Consensus 697 a~~~n~~~i 705 (741)
T PRK11033 697 ALGLKAIFL 705 (741)
T ss_pred HHHHHHHHH
Confidence 997775543
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-83 Score=691.88 Aligned_cols=520 Identities=24% Similarity=0.327 Sum_probs=440.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCE-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 97 WQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 97 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
|.+...++.++.+..+++...+.++...+..|+...|.++.++.+|+ .++||.+.|++||+|.|.||++||+||+|++|
T Consensus 341 Fdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G 420 (951)
T KOG0207|consen 341 FDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG 420 (951)
T ss_pred ccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC
Confidence 33444555566777777888888888889999999999999999996 89999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
++ +||||++|||++||.|++|+.|.+||.+.+|.+...++++|.||.+++|.++++++ ..++|+|+.+|+++.++.++
T Consensus 421 ss-~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~ 499 (951)
T KOG0207|consen 421 SS-EVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPV 499 (951)
T ss_pred ce-eechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCch
Confidence 98 89999999999999999999999999999999999999999999999999999998 67899999999999998777
Q ss_pred HHHHHHHHHHHHhhccC----------CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhh
Q 005866 255 IAVGMIVEIIVMYPIQD----------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 324 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~l 324 (673)
+++..+.++++|..... ..+..++..++.+++++|||+|.++.|++...+....+++|+++|..+.+|.+
T Consensus 500 Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~ 579 (951)
T KOG0207|consen 500 VIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKA 579 (951)
T ss_pred hhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHH
Confidence 76666666665544333 33455677788899999999999999999999999999999999999999999
Q ss_pred cCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecC
Q 005866 325 AGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPF 404 (673)
Q Consensus 325 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f 404 (673)
.++++++||||||||+|++.|.+.. .+....+..+.+.+++..+. .+.||+..|++.|+.+..........+..-.|
T Consensus 580 hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~Es-~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~ 656 (951)
T KOG0207|consen 580 HKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAMES-GSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYF 656 (951)
T ss_pred hcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHhc-CCcCchHHHHHHHHHhcccccCccccceeecc
Confidence 9999999999999999999998744 44433556666665555443 45579999999987543311111111122223
Q ss_pred CCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEE
Q 005866 405 NPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFM 484 (673)
Q Consensus 405 ~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~l 484 (673)
..+.....+.+ +++. +.-|+-+++..... ..++.+...+++....|..+.+++... ++.
T Consensus 657 pg~g~~~~~~~---~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~ 715 (951)
T KOG0207|consen 657 PGEGIYVTVTV---DGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG-------------QLV 715 (951)
T ss_pred cCCCcccceEE---eeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------EEE
Confidence 22222211121 2333 56699998876432 235557778888899999999999988 999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCE
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG 564 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (673)
|++.++|++|||+..+|..||+.|++++|+||||..+|+++|+++|+. .|
T Consensus 716 gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V 765 (951)
T KOG0207|consen 716 GVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NV 765 (951)
T ss_pred EEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eE
Confidence 999999999999999999999999999999999999999999999974 58
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHH
Q 005866 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 644 (673)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~ 644 (673)
||.+.|+||.++|+.+|++++.|+|||||+||+|||.+|||||+||.|+++|.++||+||+.||+..++.++..+|++++
T Consensus 766 ~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~ 845 (951)
T KOG0207|consen 766 YAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVK 845 (951)
T ss_pred EeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccceeeeeeeccccCC
Q 005866 645 RMKNYTVSIFPDLGGSALTFNKNVSES 671 (673)
Q Consensus 645 ~i~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (673)
+||.++.|++.+|+..+.+..|..=|=
T Consensus 846 rIk~N~~~A~~yn~~~IpIAagvF~P~ 872 (951)
T KOG0207|consen 846 RIKLNFVWALIYNLVGIPIAAGVFAPF 872 (951)
T ss_pred hHHHHHHHHHHHHHhhhhhheecccCC
Confidence 999999999999999877777765543
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=5.9e-79 Score=676.77 Aligned_cols=472 Identities=35% Similarity=0.503 Sum_probs=412.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH--hcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEe
Q 005866 104 ITLLVINSTISFIEENNAGNAAAALMA--RLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181 (673)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vd 181 (673)
+++++++.+++.++++++.+..+.+.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||+|++|++ .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 445677888899999999999999888 778899999999 9999999999999999999999999999999986 799
Q ss_pred cccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 005866 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIG-NFCICSIAVGM 259 (673)
Q Consensus 182 es~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 259 (673)
||+|||||.|+.|.+|+.+++||.+.+|.+.+.|+++|.+|..+++..++.+.. .++++++..+++. .++++++++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987764 3688899999988 55554443333
Q ss_pred HHHHHHHhhccCC--cchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCc
Q 005866 260 IVEIIVMYPIQDR--EYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (673)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGT 337 (673)
++.+++|+..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3333333222112 36778899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEEEEc
Q 005866 338 LTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYID 417 (673)
Q Consensus 338 LT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~ 417 (673)
||+|+|++.++.. ... ...+.||++.+++.++.. +.+...||++..++++..+..
T Consensus 241 LT~~~~~v~~~~~--~~~---------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSV--LGG---------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEe--cCC---------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 9999999987542 110 123567999999887532 123567999999888888765
Q ss_pred CCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcch
Q 005866 418 NAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDS 497 (673)
Q Consensus 418 ~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 497 (673)
+++ .++||+++.+.+.|.+ +.+..+++..+|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4689999999988742 2334556788999999999887 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHH
Q 005866 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIV 577 (673)
Q Consensus 498 ~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 577 (673)
+++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 5889999999999
Q ss_pred HHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 005866 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDL 657 (673)
Q Consensus 578 ~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~ 657 (673)
+.+|+.|+.|+|+|||.||+|||++|||||+|+ ++++||++++++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred ceeeee
Q 005866 658 GGSALT 663 (673)
Q Consensus 658 ~~~~~~ 663 (673)
+..+..
T Consensus 475 ~~~~~~ 480 (499)
T TIGR01494 475 LILIPL 480 (499)
T ss_pred HHHHHH
Confidence 886543
No 26
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.3e-78 Score=672.48 Aligned_cols=505 Identities=28% Similarity=0.387 Sum_probs=425.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCC
Q 005866 76 VMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPG 155 (673)
Q Consensus 76 ~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~G 155 (673)
++.++++++++++ .|.++..|+++++++..++.++++++.+.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 3445666666664 688888899999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-
Q 005866 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT- 234 (673)
Q Consensus 156 DiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (673)
|+|.+++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|+++++|++||.+|.+|++.++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999988876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 235 NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
.+++++++.+++++.++.+.++.+.++.+++++.... +..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 5678999999999988776655554544454443322 33377788999999999999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhc
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA 394 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 394 (673)
+|+++++|++++++++|||||||||+|+|++.+.. +.+++.+++..+ ..+.||++.++++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~e-~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAAE-QASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHHh-ccCCCcHHHHHHHHHHhcC----
Confidence 99999999999999999999999999999998743 125566665443 4456799999998754321
Q ss_pred cCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC
Q 005866 395 GIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK 474 (673)
Q Consensus 395 ~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~ 474 (673)
.....+.+|. + .... ..+|..+ ..|+++.+.+... ..+..+|.+++.++...
T Consensus 300 ~~~~~~~~~g---~-gi~~---~~~g~~~--~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG---E-GVRA---VVDGGEV--RIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC---C-eEEE---EECCeEE--EEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC------
Confidence 1222222221 1 1111 1245443 3588876643210 14567788888887654
Q ss_pred CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCc
Q 005866 475 DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAAL 553 (673)
Q Consensus 475 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi-~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~ 553 (673)
.+.|.+.++|++||+++++|+.|+++|+ +++|+|||+..++..+++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999995
Q ss_pred cHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHH
Q 005866 554 PIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 554 ~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i 632 (673)
++|++..|++|.++++.++.+++.|+|+|||.||++|++.||+||++| ++++.++++||+++++++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 357888999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccceeee-eeecccc
Q 005866 633 ISAVLTSRAIFQRMKNYTVSIFPDLGGSAL-TFNKNVS 669 (673)
Q Consensus 633 ~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 669 (673)
.+++.+||++++++++++.|.+..|+..+. .+.|.++
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~ 512 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLP 512 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999988865433 3334443
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.5e-77 Score=671.50 Aligned_cols=516 Identities=27% Similarity=0.374 Sum_probs=430.5
Q ss_pred HHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECC-EEEEEeCCCCCCC
Q 005866 77 MEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDG-RWNEQDASILVPG 155 (673)
Q Consensus 77 ~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g-~~~~i~~~~Lv~G 155 (673)
+.++++++++++ .|.++..++++++++..++.++++++++.+++|....|++++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 344555666553 67788899999999999999999999999999998889999999996 9999999999999
Q ss_pred cEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-
Q 005866 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT- 234 (673)
Q Consensus 156 DiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (673)
|+|.+++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|+++|.+|++|++.++++++
T Consensus 78 Div~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 9999999999999999999996 79999999999999999999999999999999999999999999999999988776
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 235 NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
.+++++++.+++++.++.+.++++.++.+++++... .. ..+..++++++++|||+||+++++++..+..+++++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-AL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 567899999999998876655544444444443322 22 678889999999999999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCC--hHHHHHHHHHcccccccchHHHHHHhhcCChHHH
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD--ADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA 392 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 392 (673)
+|+++++|+++++|++|||||||||+|+|++.+.. ... +.+ +++++.+++..+. .+.||++.|+.+++......
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998754 221 222 5666666665544 35679999999876432110
Q ss_pred hccCc-EEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCC
Q 005866 393 RAGIQ-EVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPE 471 (673)
Q Consensus 393 ~~~~~-~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~ 471 (673)
... + ....+| .+..... .+|. ..+..|+++.+ +.... +. ......++.+..+|+|+++++...
T Consensus 310 ~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~~~~~--~~-~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-ELAAE--PI-SASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-hhcCC--Cc-hhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 111111 1111111 1341 24456888876 21111 11 123345667889999999999765
Q ss_pred CCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccccccccccc
Q 005866 472 GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESI 550 (673)
Q Consensus 472 ~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~g-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~ 550 (673)
+++|.+.++|++||+++++|+.|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 899999999999999999999999999 999999999999999999999994
Q ss_pred CCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChh
Q 005866 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (673)
Q Consensus 551 ~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~ 630 (673)
++|+++.|++|.++++.++..++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.+++++
T Consensus 426 ------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 426 ------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred ------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 631 VIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 631 ~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
.++.++++||++++||++++.|.+..|+..+..
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888877553
No 28
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=9.5e-77 Score=662.79 Aligned_cols=491 Identities=27% Similarity=0.402 Sum_probs=413.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC-CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~-g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~ 174 (673)
+|.....++++++++..++.+.++++++.+++|.+..|.+++++|+ |++++|++++|+|||+|+|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455556677777888888888889999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHH
Q 005866 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (673)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (673)
|++ .||||+|||||.|+.|.+||.||+||.+.+|.++++|+++|.+|.+|++.++++++ .+++++++..++++.++++
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 997 79999999999999999999999999999999999999999999999999999876 5678999999999988776
Q ss_pred HHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEec
Q 005866 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (673)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~D 333 (673)
.+++..++.+++|+ .++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~~~~~--------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFVIWL--------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 55544444333322 3778899999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEE
Q 005866 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (673)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (673)
||||||+|+|++.++. .. .+.++++++.+++..+.. +.||++.++++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~~-s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEAG-SEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 9999999999998753 22 234567777777666543 457999999987542211000111112111 111111
Q ss_pred EEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCC
Q 005866 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (673)
Q Consensus 414 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (673)
. -+|. .+..|+++.+.+... . +..+.++|.++++++... +++|++.++|++
T Consensus 356 ~---~~g~--~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEGT--KIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECCE--EEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 1343 345699988754211 1 112457899999988765 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (673)
||+++++|++|++.|++++|+|||+..++..+++++|+. +|++..|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005866 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSI 653 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~ 653 (673)
.++++.++.+++.|+|+|||.||++|++.||+||+||+|++.++++||+++++++++.++.++++||+++++|++++.|.
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeee
Q 005866 654 FPDLGGSALT 663 (673)
Q Consensus 654 ~~~~~~~~~~ 663 (673)
+..|+..+..
T Consensus 536 ~~~n~~~i~l 545 (562)
T TIGR01511 536 FGYNVIAIPI 545 (562)
T ss_pred HHHHHHHHHH
Confidence 9888876543
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=5.6e-76 Score=687.23 Aligned_cols=506 Identities=24% Similarity=0.354 Sum_probs=427.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
+|.+...+++++.++.+++.+.+.++.+.+++|.+..|++++++|+|++++|+.++|+|||+|+|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 34446778888888989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
++ .||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.++++.++++++ ..++++++.+++++.+++++
T Consensus 365 ~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 EA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred eE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999876 56789999999999887766
Q ss_pred HHHHHHHHHHHHhhccC-CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEec
Q 005866 255 IAVGMIVEIIVMYPIQD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~D 333 (673)
++++.++.+++|+.... ..|...+..++++++++|||+|++++|+++..+..+++++|+++|+.+++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 55544444444443221 12445677789999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEE
Q 005866 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (673)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (673)
||||||+|+|+|.+.. .+ .+.++++++.+++..+. .+.||++.+++++..+. .... ..+|.....+ .+
T Consensus 524 KTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~--~~~~~~~~g~-Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQ--VNGFRTLRGL-GV 591 (834)
T ss_pred CCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCC--cccceEecce-EE
Confidence 9999999999998743 22 24566677777666654 44579999998764321 1110 1122221111 11
Q ss_pred EEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCC
Q 005866 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (673)
Q Consensus 414 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (673)
... .+|.. +.+|+++.+.+.... .+.+...++.+..+|.++++++++. .++|++.++|++
T Consensus 592 ~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 111 24543 456999987543211 2345566778889999999999876 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (673)
||+++++|+.|++.|++++|+|||+..++..+++++|+. +++++..|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHH
Confidence 999999999999999999999999999999999999995 36899999999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005866 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSI 653 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~ 653 (673)
.++++.++.+++.|+|+|||.||+||++.||+||+||+|++.++++||++++++++++|..++++||+++++|++++.|.
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeeee
Q 005866 654 FPDLGGSALTF 664 (673)
Q Consensus 654 ~~~~~~~~~~~ 664 (673)
|.+|+..+...
T Consensus 782 ~~yn~~~i~~a 792 (834)
T PRK10671 782 FIYNSLGIPIA 792 (834)
T ss_pred HHHHHHHHHHH
Confidence 98888775433
No 30
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-75 Score=622.30 Aligned_cols=563 Identities=23% Similarity=0.278 Sum_probs=424.7
Q ss_pred CCCC-HHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005866 35 EGLS-SQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (673)
Q Consensus 35 ~GL~-~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 113 (673)
.|+. ..+++....+||.|..+.+.|++-..|.+....||+ +|++.++..|.+. .+|++.+.-+++++....-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfF-VFQVFcvgLWCLD------eyWYySlFtLfMli~fE~t 233 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFF-VFQVFCVGLWCLD------EYWYYSLFTLFMLIAFEAT 233 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCcee-eHhHHhHHHHHhH------HHHHHHHHHHHHHHHHHHH
Confidence 4665 344555556699999999999988888899999995 5555566666664 4788777777776665555
Q ss_pred HHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcC---CCeeeceEEEEecCCeeEecccccCCCC
Q 005866 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL---GDIIPADARLLEGDPLKIDQSALTGESL 190 (673)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~---G~~vPaD~~ll~g~~l~Vdes~LTGEs~ 190 (673)
-.+|+.++-+..+. +...|..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+|+.|+| .|||++|||||.
T Consensus 234 lV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESv 311 (1160)
T KOG0209|consen 234 LVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCc
Confidence 55555555544443 3344667899999999999999999999999987 578999999999998 599999999999
Q ss_pred cccCCC-----------------CCeeeecceeee-------------CeEEEEEEEecccccccchhhhhcccCCCCcH
Q 005866 191 PVTKGP-----------------GDGVYSGSTCKQ-------------GEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240 (673)
Q Consensus 191 pv~k~~-----------------~~~v~aGt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 240 (673)
|..|.+ ..++|.||.+++ |.+.+.|++||.+|..|++.+.+....++...
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 999976 247999999875 56899999999999999988766554222111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQD------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 241 ~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
... ..+ ++++++.++.++ ..+|.|.. ++-...+..+..++...+|+.||+-++++...+...|+|.|++
T Consensus 392 Nn~-Etf--~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vy 466 (1160)
T KOG0209|consen 392 NNR-ETF--IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVY 466 (1160)
T ss_pred ccH-HHH--HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhcee
Confidence 111 111 112222222222 22232221 1112234556667788899999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeeccc-------CCChHHHHHHHH--Hc---ccccccchHHHHH
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK-------GVDADTVVLMAA--QA---SRTENQDAIDAAI 382 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~-------~~~~~~~~~~~~--~~---~~~~~~~~~~~a~ 382 (673)
|..|-.+.-.|++|++|||||||||+..|.|.++.-..... ....+.+..+|+ .. +..-.+||+++|.
T Consensus 467 CTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~ 546 (1160)
T KOG0209|consen 467 CTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKAT 546 (1160)
T ss_pred ecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHH
Confidence 99999999999999999999999999999998743100110 011223333332 22 1223478999999
Q ss_pred HhhcCChHH----------HhccCcEEEEecCCCCCceEEEEEEcC----CCeEEEEEeCcHHHHHHhccCChHHHHHHH
Q 005866 383 VGMLADPKE----------ARAGIQEVHFLPFNPTDKRTALTYIDN----AGKMHRVSKGAPEQILNLAHNKSDIERRVH 448 (673)
Q Consensus 383 ~~~~~~~~~----------~~~~~~~~~~~~f~~~~~~~~v~~~~~----~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~ 448 (673)
+......-+ .....++.+.+.|+|..|||+++.... .-+++..+|||||.+.++.. +.|..++
T Consensus 547 l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~ 623 (1160)
T KOG0209|consen 547 LEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYD 623 (1160)
T ss_pred HHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHH
Confidence 877632211 112467788899999999999887532 23678889999999988765 6788999
Q ss_pred HHHHHHHHcCCeEEEEEEeecCC--------CCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChH
Q 005866 449 AVIDKFAERGLRSLAVAYQEVPE--------GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (673)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~ 520 (673)
+...+|+++|.||++++||.++. -.+++.|++|+|.|++.|..|+|+|++++|+.|++.+++++|+||||+.
T Consensus 624 ~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpL 703 (1160)
T KOG0209|consen 624 EIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPL 703 (1160)
T ss_pred HHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCcc
Confidence 99999999999999999999873 2367889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCC---------------------------------------ccccccccccccCCccHHHHhhh
Q 005866 521 IGKETGRRLGMGTNMYPS---------------------------------------SALLGQDKDESIAALPIDELIEK 561 (673)
Q Consensus 521 ~a~~ia~~~gi~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
||.++|+++|+....... ..+.|..++.......+..++..
T Consensus 704 TAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h 783 (1160)
T KOG0209|consen 704 TACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPH 783 (1160)
T ss_pred chheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh
Confidence 999999999997541100 01122222222233345566677
Q ss_pred cCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccH
Q 005866 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (673)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~ 614 (673)
+.||||+.|.||..++..+++.|+.++|||||+||+.|||+||||||+-+++.
T Consensus 784 v~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 784 VWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 88999999999999999999999999999999999999999999999865443
No 31
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=4.7e-74 Score=653.73 Aligned_cols=608 Identities=19% Similarity=0.238 Sum_probs=471.4
Q ss_pred HHhhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 005866 45 RLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120 (673)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 120 (673)
+...|..|.+.+.||+.+ +++++||.++.|++|++.++++++. . ++...|.+.+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~--~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-L--SPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-c--cccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999999876 6789999999999999999999986 2 35567888899999999999999999999
Q ss_pred HHHHHHHHHHhcCCeeEEEECCE-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCC----eeEecccccCCCCcccCC
Q 005866 121 AGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (673)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~ 195 (673)
+++.+.++ +..++.|.|++. +++..|++|+|||+|.+..++.+|||.++++++. |+|++++|+||+..+.|.
T Consensus 105 R~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHh---hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 99998765 456788988644 8999999999999999999999999999997653 689999999999888764
Q ss_pred C-----------------------------------------------CCeeeecceeeeCe-EEEEEEEecccccccch
Q 005866 196 P-----------------------------------------------GDGVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (673)
Q Consensus 196 ~-----------------------------------------------~~~v~aGt~v~~g~-~~~~V~~tG~~T~~g~i 227 (673)
. .+.++.|+.+.+.. +.+.|+.||++|+.++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 2 23577888888764 78999999999987652
Q ss_pred hhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--------------C----cchhhHHHHHHHHHhhc
Q 005866 228 AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQD--------------R----EYRPGIDNLLVLLIGGI 289 (673)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~ll~~~i 289 (673)
. -..+.+++.+++..+.....+++.++..+++..+....+.. . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 22346778888888877655443333322222222111100 0 01113445667788999
Q ss_pred CCcchHHHHHHHHHHHHHHhc----------CCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCCh
Q 005866 290 PIAMPTVLSVTMAIGSHRLSQ----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDA 359 (673)
Q Consensus 290 P~~l~~~~~~~~~~~~~~l~~----------~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~ 359 (673)
|.+|++.+.+...+++..+.+ ....+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999999888754432 4678999999999999999999999999999999998776432221110
Q ss_pred H--------------------------------------------HHHHHHHHc---cc----------ccccchHHHHH
Q 005866 360 D--------------------------------------------TVVLMAAQA---SR----------TENQDAIDAAI 382 (673)
Q Consensus 360 ~--------------------------------------------~~~~~~~~~---~~----------~~~~~~~~~a~ 382 (673)
+ +.....+.+ .. .....|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 011111111 11 11134667777
Q ss_pred HhhcCChH----------------HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhcc-CChHHHH
Q 005866 383 VGMLADPK----------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAH-NKSDIER 445 (673)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~-~~~~~~~ 445 (673)
+..+.+.+ .....++.++.++|+|.||||||+++.++|+..+|||||+..|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 76542211 113578999999999999999999999999999999999999999998 4456777
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCeEEEEEecccCCCCcchHHH
Q 005866 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPRHDSAET 500 (673)
Q Consensus 446 ~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~D~lr~~~~~~ 500 (673)
...+++++|+.+|+|++|+|||.++++++ +.+|++|+++|.+++||+|++++|++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88889999999999999999999987652 34689999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc---------------------------------------
Q 005866 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL--------------------------------------- 541 (673)
Q Consensus 501 I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~--------------------------------------- 541 (673)
|+.|++||||+||+|||+.+||..+|..|++..+......+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997653321111
Q ss_pred ------cccccccccCCccHH---HHhh--hcCEEEecChhhHHHHHHHHhh-CCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 542 ------LGQDKDESIAALPID---ELIE--KADGFAGVFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 542 ------~~~~~~~~~~~~~~~---~~~~--~~~v~~~~~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
.|..+...++..... ++.. +..++||++|.||+.+|+..++ .+..+++||||+||++|++.|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111111111 1111 2348999999999999999974 478999999999999999999999999
Q ss_pred c--cccHHHHhhcCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 610 ~--~~~~~a~~aad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
+ +|.+++. +||+.+.. |.-+.+++ .+||+.|.|+.+++.|.||||+.+.++
T Consensus 820 sG~EGmQAvm-sSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred ccchhhhhhh-cccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 5 6777665 89999876 77777764 789999999999999999999998876
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-73 Score=591.76 Aligned_cols=590 Identities=22% Similarity=0.272 Sum_probs=447.7
Q ss_pred HHHhhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 005866 44 ERLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEEN 119 (673)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 119 (673)
.++++|.+|.+.+.+|.++ ..+++||...++.+|++.++.++......+. -..++.++.++++++.+.+.+++.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~--l~ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY--LSTYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc--hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999998754 4567888888888888888888775544433 223456778888888889999998
Q ss_pred hHHHHHHHHHHhcCCeeE-EEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-----cCCeeEecccccCCCCccc
Q 005866 120 NAGNAAAALMARLAPKGK-VLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVT 193 (673)
Q Consensus 120 ~~~~~~~~l~~~~~~~~~-V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~-----g~~l~Vdes~LTGEs~pv~ 193 (673)
++++.++..++ +..+ .-|+|...+ |+++|++||+|.++.+++||||.+++. |+ +.+-+-.|+||+..+.
T Consensus 152 ~r~~rd~~~Ns---e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~-~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 152 KRRRRDRELNS---EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGS-CFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHhhhhhhh---hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCc-eEEeccccCCccccee
Confidence 88888776543 3333 346776554 999999999999999999999999995 44 4799999999996555
Q ss_pred CCC-----------------------------------------------CCeeeecceeeeCeEEEEEEEecccccccc
Q 005866 194 KGP-----------------------------------------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (673)
Q Consensus 194 k~~-----------------------------------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~ 226 (673)
|-| .|.++++|.+.+|.+.|+|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 432 4689999999999999999999999974
Q ss_pred hhhhhccc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHH
Q 005866 227 AAHLVDTT---NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (673)
Q Consensus 227 i~~~~~~~---~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 303 (673)
.+... .+.+.++..++.+.+.+.+..++..++ ++.....+..|...+.+++.++...||++|-+.+.++..+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 23333 345567777787777765544433332 2223344577888899999999999999999999999999
Q ss_pred HHHHHhcC----CCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCCh--------------------
Q 005866 304 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDA-------------------- 359 (673)
Q Consensus 304 ~~~~l~~~----gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~-------------------- 359 (673)
.++.+.++ |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 98888775 678999999999999999999999999999999998776543322111
Q ss_pred ---------------HHHHHH--HHHcccc-c--------ccchHHHHHHhhcCC-----------------hHHHhccC
Q 005866 360 ---------------DTVVLM--AAQASRT-E--------NQDAIDAAIVGMLAD-----------------PKEARAGI 396 (673)
Q Consensus 360 ---------------~~~~~~--~~~~~~~-~--------~~~~~~~a~~~~~~~-----------------~~~~~~~~ 396 (673)
+.+..+ |+..... + ..+|.+.|++++.+. +......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 011111 1111100 0 012334444433211 11123478
Q ss_pred cEEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCC
Q 005866 397 QEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKD 475 (673)
Q Consensus 397 ~~~~~~~f~~~~~~~~v~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~ 475 (673)
+++..|||+|+.|||+++|+++ .++...|.|||+..|...... .+++++...+++++|+|++++|.|.+++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999975 688999999999999887654 34566778899999999999999999876521
Q ss_pred --------------------------CCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 005866 476 --------------------------SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (673)
Q Consensus 476 --------------------------~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~ 529 (673)
..|.+|.++|+.+.||+++++++.+++.||+|||++||+|||+.+||..+|+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 358899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC--------------------------ccccccccccccC--CccHHHHhh--hcCEEEecChhhHHHHHHH
Q 005866 530 GMGTNMYPS--------------------------SALLGQDKDESIA--ALPIDELIE--KADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 530 gi~~~~~~~--------------------------~~~~~~~~~~~~~--~~~~~~~~~--~~~v~~~~~p~~K~~iv~~ 579 (673)
++......- .++.|+.++-.+. ..++-++.. ...++||++|.||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 987543211 1122222111110 112222222 2348999999999999999
Q ss_pred HhhC-CCEEEEECCCCCCHHHHhhCCeeEEc-c-cccHHHHhhcCEEEcCCChhHHHHHHHH-HHHHHHHHHHHHHHHh
Q 005866 580 LQAR-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTVSIF 654 (673)
Q Consensus 580 l~~~-g~~v~~iGDg~ND~~al~~AdvGia~-~-~~~~~a~~aad~vl~~~~~~~i~~~i~~-gr~~~~~i~~~~~~~~ 654 (673)
+|+. |..|+++|||.||+.|+++||+||++ | +|.++. -|||+-+.. |+.+-+++.| ||+.|+|-.+...|.+
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQAS-LAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi 851 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQAS-LAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI 851 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccc-hhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHH
Confidence 9876 78999999999999999999999998 5 676654 489999976 9999999754 9999999877666654
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-63 Score=502.44 Aligned_cols=478 Identities=26% Similarity=0.380 Sum_probs=373.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhc-CCeeEEEEC-CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEeccccc
Q 005866 109 INSTISFIEENNAGNAAAALMARL-APKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186 (673)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V~r~-g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LT 186 (673)
+..+.+.+.|-|.+-+...|++.. ...++++++ |.++.+++.+|+.||+|+++.||+||+||.+++|.+ +||||.+|
T Consensus 78 FANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAIT 156 (681)
T COG2216 78 FANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAIT 156 (681)
T ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhcc
Confidence 333445555544443334443322 234666665 899999999999999999999999999999999998 89999999
Q ss_pred CCCCcccCCCC---CeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHH-
Q 005866 187 GESLPVTKGPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIV- 261 (673)
Q Consensus 187 GEs~pv~k~~~---~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~- 261 (673)
|||.||.|.+| +.|-.||.+++.+++.+++..-.+|.+.|+..+++.+ .+++|-+-.+.-+..-+ ..+++...+
T Consensus 157 GESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~L-TliFL~~~~T 235 (681)
T COG2216 157 GESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGL-TLIFLLAVAT 235 (681)
T ss_pred CCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHH-HHHHHHHHHh
Confidence 99999999998 6799999999999999999999999999999999887 45555443333221111 111111111
Q ss_pred -HHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCcccc
Q 005866 262 -EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340 (673)
Q Consensus 262 -~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~ 340 (673)
..+..|. + .-...+...++++++.+|-.+.-.++..-..++.|+.+.+++-++.+++|..|.+|++..|||||+|-
T Consensus 236 l~p~a~y~--~-g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~ 312 (681)
T COG2216 236 LYPFAIYS--G-GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITL 312 (681)
T ss_pred hhhHHHHc--C-CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceee
Confidence 1111111 0 11124566788999999988777666666678899999999999999999999999999999999999
Q ss_pred CceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChH-HHh-ccCc-EEEEecCCCCCceEEEEEEc
Q 005866 341 NKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPK-EAR-AGIQ-EVHFLPFNPTDKRTALTYID 417 (673)
Q Consensus 341 ~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~-~~~~-~~~~~~f~~~~~~~~v~~~~ 417 (673)
|+=.-.+.+ ...+.+.+++...|..++-. +..|..++++....+.. ..+ .... ..++.||+.+.+++++-..
T Consensus 313 GnR~A~~f~---p~~gv~~~~la~aa~lsSl~-DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~- 387 (681)
T COG2216 313 GNRQASEFI---PVPGVSEEELADAAQLASLA-DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP- 387 (681)
T ss_pred cchhhhhee---cCCCCCHHHHHHHHHHhhhc-cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC-
Confidence 875544422 22467777776666555433 22355555554432211 001 1111 3578899988766665432
Q ss_pred CCCeEEEEEeCcHHHHHHhccCCh-HHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcc
Q 005866 418 NAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHD 496 (673)
Q Consensus 418 ~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 496 (673)
++ ..+-|||.+.+........ ..++.++...++.++.|-..++++... +++|++.++|-++||
T Consensus 388 -~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~G 451 (681)
T COG2216 388 -GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPG 451 (681)
T ss_pred -CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchh
Confidence 33 4567999999998876433 378889999999999999999999876 899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHH
Q 005866 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEI 576 (673)
Q Consensus 497 ~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 576 (673)
.+|-+.+||+.||+.+|+||||+.||..+|++.|++ +..|.++|++|.++
T Consensus 452 i~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD------------------------------dfiAeatPEdK~~~ 501 (681)
T COG2216 452 IKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------DFIAEATPEDKLAL 501 (681)
T ss_pred HHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch------------------------------hhhhcCChHHHHHH
Confidence 999999999999999999999999999999999996 24799999999999
Q ss_pred HHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHH
Q 005866 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (673)
Q Consensus 577 v~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~ 642 (673)
++.-|.+|+.|+|+|||+||+|||.+||||+||.+|+++|||++++|=+|.|...+.+.++.|+++
T Consensus 502 I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 502 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred HHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999973
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.3e-36 Score=304.49 Aligned_cols=220 Identities=36% Similarity=0.533 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCe-eEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-cCCeeE
Q 005866 103 IITLLVINSTISFIEENNAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-GDPLKI 180 (673)
Q Consensus 103 ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~-g~~l~V 180 (673)
++++++++.++++++++++++.++++++..+++ ++|+|||+++++++++|+|||+|.|++||++||||+|++ |. +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 566778889999999999999999998888887 999999999999999999999999999999999999999 76 489
Q ss_pred ecccccCCCCcccCC-----CCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-CCCcHHHHHHHHHHHHHHH
Q 005866 181 DQSALTGESLPVTKG-----PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 181 des~LTGEs~pv~k~-----~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 254 (673)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+...... +++++++..+++..+++++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999998887764 4588999999998887655
Q ss_pred HHHHHHHHHHHHhh-ccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhh
Q 005866 255 IAVGMIVEIIVMYP-IQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323 (673)
Q Consensus 255 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~ 323 (673)
+++..++.+++++. ....+|...+..++.+++++||++||+++++++.+++++|.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 54444443333332 2566788889999999999999999999999999999999999999999999985
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=8.9e-26 Score=223.44 Aligned_cols=211 Identities=31% Similarity=0.420 Sum_probs=147.9
Q ss_pred ceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCC
Q 005866 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNP 406 (673)
Q Consensus 327 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~ 406 (673)
|++||||||||||++++.+. . .+...++.++... ...+.||+..++..+....... ........
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~~~~~~----- 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSLESFSE----- 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCCEEEEE-----
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhhhhhee-----
Confidence 68999999999999999991 1 3344445444433 2334568888888765432211 11111111
Q ss_pred CCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEE
Q 005866 407 TDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGL 486 (673)
Q Consensus 407 ~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 486 (673)
...++..... ++. +. |+++.+....... ............+|.+.+.++.. +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 1111111111 111 22 8888877654321 11112222335556666666652 489999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 487 i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999421 3799
Q ss_pred ec--ChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCC
Q 005866 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (673)
Q Consensus 567 ~~--~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad 604 (673)
+. +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.63 E-value=2e-15 Score=128.28 Aligned_cols=123 Identities=26% Similarity=0.387 Sum_probs=108.2
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhh
Q 005866 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (673)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
...+.++---++=++++++|++|++. +++++.|||...+....|+-.|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56777877888889999999999999 99999999999999999999998643
Q ss_pred cCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc-c--cccHHHHhhcCEEEcCCChhHHHHH
Q 005866 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~-~--~~~~~a~~aad~vl~~~~~~~i~~~ 635 (673)
++|+...|+.|.++++.|+++++.|+|+|||.||.+||+.||+||.. + +.++-+.++||+++-+ ...++.+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999876 4 4667788999999855 4444443
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.37 E-value=1.1e-12 Score=104.06 Aligned_cols=67 Identities=37% Similarity=0.526 Sum_probs=60.4
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-cchHHHHHHHHHHhHHHHHHHHHHHHH
Q 005866 18 LENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEK-KESKFLKFLGFMWNPLSWVMEAAAIMA 84 (673)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~il~ 84 (673)
||+++.++++++|+++ .+||+.+|+++|+++||+|.++.+ ++++|..|+++|++|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 6999999999999976 899999999999999999999654 577888999999999999999998875
No 38
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.10 E-value=4e-10 Score=117.09 Aligned_cols=131 Identities=18% Similarity=0.239 Sum_probs=98.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE-ecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA-GVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~p 570 (673)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.........+...-... .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCc
Confidence 578999999999999999999999999888888889999853110000000000000 0000 0224
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|.+.++.+.++ .+.++++|||.||.+|++.|++|||| ++.+..++.||.++..++++++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888777543 35799999999999999999999999 889999999999999999999987764
No 39
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.10 E-value=6.3e-10 Score=108.26 Aligned_cols=131 Identities=14% Similarity=0.100 Sum_probs=95.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-......+.+. ..... .....|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 68999999999999975 99999999999999999999986321111111000 00000 0013478
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
.|...++.+++.|..+.|+|||.||.+|++.||+||++...+ ..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~-~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPE-NVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCH-HHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999888878999999999999999999999997544 4444554433345678888877665
No 40
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.09 E-value=6.7e-10 Score=111.08 Aligned_cols=153 Identities=23% Similarity=0.294 Sum_probs=103.8
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-ccc---ccc-----ccc----
Q 005866 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSS-ALL---GQD-----KDE---- 548 (673)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~-~~~---~~~-----~~~---- 548 (673)
|.+.-.|. +.+.+.++|++|++.|++++++||++...+..+.+.+|+....+ ... +.. +.. .+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 77899999999999999999999999999999999999853221 000 000 000 000
Q ss_pred ----------------cc------------CC---ccHHHHhhhcC--E-------EEecChh--hHHHHHHHHhhC---
Q 005866 549 ----------------SI------------AA---LPIDELIEKAD--G-------FAGVFPE--HKYEIVKRLQAR--- 583 (673)
Q Consensus 549 ----------------~~------------~~---~~~~~~~~~~~--v-------~~~~~p~--~K~~iv~~l~~~--- 583 (673)
.. .. ....+.+++.. + +....|. .|..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 00 01111111111 1 1233332 366666666443
Q ss_pred -CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 584 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 584 -g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|..+++-+++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 346999999999999999999999999999999999999999999999998885
No 41
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.06 E-value=4.9e-10 Score=110.80 Aligned_cols=145 Identities=19% Similarity=0.273 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--Cccc-cc-cc------ccc-------------
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSAL-LG-QD------KDE------------- 548 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~-~~-~~------~~~------------- 548 (673)
++.+.+.++|++|++.|++++++||++...+..+++.+++....+. ...+ .. .. .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4888999999999999999999999999999999999998632110 0000 00 00 000
Q ss_pred -----c---------cCCc---cHHHHhhhcC--E-----EEec--ChhhHHHHHHHHhhC----CCEEEEECCCCCCHH
Q 005866 549 -----S---------IAAL---PIDELIEKAD--G-----FAGV--FPEHKYEIVKRLQAR----KHICGMTGDGVNDAP 598 (673)
Q Consensus 549 -----~---------~~~~---~~~~~~~~~~--v-----~~~~--~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~ 598 (673)
. .... .+...+.... + +..+ ....|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 0000 0111111111 1 1122 235787777776543 235999999999999
Q ss_pred HHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 599 al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
|++.|++|+||+||.+.+|+.||+|..+++-+++.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999888888887653
No 42
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.06 E-value=1.4e-09 Score=111.56 Aligned_cols=67 Identities=21% Similarity=0.194 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|..-++.+.+. ...|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-+++.++|+
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 3455555555432 246999999999999999999999999999999999999999999999998885
No 43
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.06 E-value=2e-09 Score=110.00 Aligned_cols=154 Identities=21% Similarity=0.233 Sum_probs=106.6
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------Ccccccccccc------
Q 005866 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSALLGQDKDE------ 548 (673)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~---------~~~~~~~~~~~------ 548 (673)
|.+.-.|. +.+.+.++|+++++.|++++++||++...+..+.+++++....+. ...+....++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999998642110 00000000000
Q ss_pred -----------------------------------------------ccC----------CccHHHHh---hh-----cC
Q 005866 549 -----------------------------------------------SIA----------ALPIDELI---EK-----AD 563 (673)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (673)
... .....+.. .. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00111111 00 11
Q ss_pred EEE-------ecCh--hhHHHHHHHHhhC-CC---EEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChh
Q 005866 564 GFA-------GVFP--EHKYEIVKRLQAR-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (673)
Q Consensus 564 v~~-------~~~p--~~K~~iv~~l~~~-g~---~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~ 630 (673)
.+. ...| .+|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+||++.+|+.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 111 2222 5687777777652 33 499999999999999999999999999999999999988999999
Q ss_pred HHHHHHHH
Q 005866 631 VIISAVLT 638 (673)
Q Consensus 631 ~i~~~i~~ 638 (673)
+|..+++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
No 44
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.04 E-value=5.7e-10 Score=87.19 Aligned_cols=59 Identities=41% Similarity=0.617 Sum_probs=52.8
Q ss_pred HcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005866 29 NLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (673)
Q Consensus 29 ~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 87 (673)
.++++ .+||+.+|+++|+++||+|.++.++ .++|..|+++|++|+.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 46677 4599999999999999999999876 77888899999999999999999999876
No 45
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.00 E-value=9.2e-10 Score=113.08 Aligned_cols=66 Identities=18% Similarity=0.167 Sum_probs=56.2
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCE--EEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~--vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+. ...|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 476666666543 246999999999999999999999999999999999986 777888999998884
No 46
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.97 E-value=2.7e-09 Score=100.16 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=84.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe--cChhhHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--VFPEHKYEI 576 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K~~i 576 (673)
..|+.|++.|+++.++|+.+...+....+.+|+.. .|.. -.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 58999999999999999999999999999999852 1111 224444455
Q ss_pred HHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHH
Q 005866 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 577 v~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~ 633 (673)
++.++-....++++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.+.+
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHH
Confidence 555544446799999999999999999999999999999999999998766655443
No 47
>PRK10976 putative hydrolase; Provisional
Probab=98.97 E-value=2.3e-09 Score=109.75 Aligned_cols=66 Identities=20% Similarity=0.213 Sum_probs=55.3
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC--EEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad--~vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+. ...|+++|||.||.+||+.|+.|+||+||++.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 465555555432 24699999999999999999999999999999999987 7788889999998885
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.95 E-value=4.8e-09 Score=104.50 Aligned_cols=146 Identities=21% Similarity=0.262 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-ccccc--------cccc------------
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSS-ALLGQ--------DKDE------------ 548 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~-~~~~~--------~~~~------------ 548 (673)
.+.+.+.++|++|++.|++++++||++...+..+.+.+|+....+ ... +.... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999998643211 000 00000 0000
Q ss_pred -------cc-------------CCccHHHHhhhcC---------EEEecCh--hhHHHHHHHHhhC----CCEEEEECCC
Q 005866 549 -------SI-------------AALPIDELIEKAD---------GFAGVFP--EHKYEIVKRLQAR----KHICGMTGDG 593 (673)
Q Consensus 549 -------~~-------------~~~~~~~~~~~~~---------v~~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg 593 (673)
.. .......+.+... .+....| ..|..-++.+.+. ...++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0000111111111 1112223 4677777766543 3569999999
Q ss_pred CCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH----HHHHHH
Q 005866 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 637 (673)
Q Consensus 594 ~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~----i~~~i~ 637 (673)
.||.+|++.|++|+||+|+.+.+|+.||.|..+++-++ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 666553
No 49
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.90 E-value=7.7e-09 Score=102.59 Aligned_cols=128 Identities=20% Similarity=0.251 Sum_probs=92.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccc-ccccccccCCccHHHHhhhcCEEEe-cC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-GQDKDESIAALPIDELIEKADGFAG-VF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~-~~ 569 (673)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- ....... +..... .+... ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~~~~--------------~~~~~~~~ 149 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDGKLTG--------------LVEGPIVD 149 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECCEEEE--------------EecCcccC
Confidence 5899999999999999999999999999999999999998531 1100000 000000 00011 11
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHH
Q 005866 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 570 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~ 635 (673)
+..|..+++.+.++ ...++++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+..+
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 23366666655433 235889999999999999999999985 567888999999999998877654
No 50
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.89 E-value=9.9e-09 Score=95.55 Aligned_cols=105 Identities=25% Similarity=0.340 Sum_probs=81.8
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (673)
+|+.|++.|+++.++||++...+..+.+.+|+... |... ..|...++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998521 1111 223333333
Q ss_pred H----hhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH-HHHHH
Q 005866 580 L----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 636 (673)
Q Consensus 580 l----~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~-i~~~i 636 (673)
+ .-....++|+||+.||.+|++.|++++++.++.+..+..|++++..+.-.+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 3 323457999999999999999999999999888899999999998775343 54444
No 51
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.86 E-value=2e-08 Score=103.17 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhC-C---CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~-g---~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+. | ..++++||+.||.+|++.|++|++||++.+..|+.||.++.+++-+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 455555544332 2 46999999999999999999999999999999999999999999999999885
No 52
>PLN02887 hydrolase family protein
Probab=98.85 E-value=1.8e-08 Score=112.19 Aligned_cols=53 Identities=21% Similarity=0.367 Sum_probs=50.2
Q ss_pred CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 585 ~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|+++|||.||.+||+.|+.|||||||.+.+|++||+|..+++-++|..+|+
T Consensus 524 eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 524 DEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999885
No 53
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.84 E-value=8.4e-09 Score=104.22 Aligned_cols=66 Identities=23% Similarity=0.194 Sum_probs=56.3
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
..|..-++.+.+ ....++++||+.||.+||+.|+.|+||+++++..+..||.++...+-++|.++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 678777777654 235799999999999999999999999999999999999999987778888765
No 54
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.84 E-value=1.7e-08 Score=98.78 Aligned_cols=119 Identities=20% Similarity=0.195 Sum_probs=85.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC-
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF- 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 569 (673)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|++.............+.. .+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG--------------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG--------------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec--------------eeeeeecC
Confidence 6899999999999999999999999999999999999999964321111110000000 2333333
Q ss_pred hhhHHHHHHHHhh-CCC---EEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEE
Q 005866 570 PEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624 (673)
Q Consensus 570 p~~K~~iv~~l~~-~g~---~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl 624 (673)
.+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+++++.... .+..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHhc
Confidence 4788888866554 344 58999999999999999999999974333 444455443
No 55
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.76 E-value=8e-08 Score=97.74 Aligned_cols=54 Identities=20% Similarity=0.226 Sum_probs=47.5
Q ss_pred CCEEEEECCCCCCHHHHhhCCeeEEccccc---HHHHhh--c-CEEEcCCChhHHHHHHH
Q 005866 584 KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 637 (673)
Q Consensus 584 g~~v~~iGDg~ND~~al~~AdvGia~~~~~---~~a~~a--a-d~vl~~~~~~~i~~~i~ 637 (673)
...++++||+.||.+|++.|++||||+|+. +..|+. | ++|..+++-+++.++++
T Consensus 194 ~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 457999999999999999999999999987 468876 4 58888999999999885
No 56
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.68 E-value=3.4e-08 Score=82.78 Aligned_cols=65 Identities=31% Similarity=0.404 Sum_probs=52.0
Q ss_pred ccchHHHHHHhhcCC------hHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccC
Q 005866 374 NQDAIDAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN 439 (673)
Q Consensus 374 ~~~~~~~a~~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~ 439 (673)
.++|.+.|++.++.. ....+..++.++.+||+|++|||+++++ .++.+++++|||||.|+++|++
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 456778887766432 3455678999999999999999999998 3445777999999999999974
No 57
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.67 E-value=9.2e-08 Score=91.82 Aligned_cols=102 Identities=25% Similarity=0.278 Sum_probs=79.7
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (673)
.+|+.|++.|+++.++||.+...+..+++++|+.. +|. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eec--CCCcHHHHHH
Confidence 68999999999999999999999999999999852 121 1233444444
Q ss_pred HH-hhC---CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHH
Q 005866 579 RL-QAR---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 579 ~l-~~~---g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i 632 (673)
.+ ++. ...++|+||+.||.+|++.|+++++++++.+..+..||+++..++-.+.
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~ 160 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGA 160 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCH
Confidence 33 222 3579999999999999999999999998888889999999975543333
No 58
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.65 E-value=4.3e-08 Score=99.73 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=56.2
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
..|..-++.+.+. ...++++||+.||.+|++.|+.|++|+++++.+++.||+++.+++-++|..+|
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 3577777766553 24699999999999999999999999999999999999999998888887653
No 59
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.64 E-value=2.4e-07 Score=90.79 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=89.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE--ecC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA--GVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~ 569 (673)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+..-........+.. .+.. -..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-----------------~i~~~~~~~ 129 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-----------------MITGYDLRQ 129 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC-----------------eEECccccc
Confidence 4689999999999999 9999999999999999999999852111000000000 0000 123
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCE-EEcCCChhHHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 636 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~-vl~~~~~~~i~~~i 636 (673)
|..|...++.++..+..++|+|||.||.+|.++|++|+..+.........++. ++ +++..+...+
T Consensus 130 p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred cchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 77888888988888889999999999999999999999887544444445555 43 4566666554
No 60
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.64 E-value=2.9e-07 Score=94.46 Aligned_cols=67 Identities=21% Similarity=0.159 Sum_probs=51.3
Q ss_pred hhHHHHHHHHh----h---CCCEEEEECCCCCCHHHHhhCCeeEEccccc-HH-----HHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQ----A---RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~----~---~g~~v~~iGDg~ND~~al~~AdvGia~~~~~-~~-----a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|..-++.+. . ....|+++|||.||.+||+.|++|||||++. +. .+..+|++....+-+++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 44555444443 3 4467999999999999999999999999544 21 3447899998888899998885
No 61
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.58 E-value=1.7e-07 Score=83.53 Aligned_cols=115 Identities=23% Similarity=0.357 Sum_probs=89.6
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (673)
-.|+.|.++|+++.++||++......-|+.+||.. +|- --.+|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~q--G~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQ--GISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eee--chHhHHHHHH
Confidence 37999999999999999999999999999999951 121 1356766665
Q ss_pred HHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChh----HHHHHHHHHHHHHHH
Q 005866 579 RLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS----VIISAVLTSRAIFQR 645 (673)
Q Consensus 579 ~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~----~i~~~i~~gr~~~~~ 645 (673)
.+.++ -+.|+++||..||.|+|+..++++|+.++.+..++.||+|+....-. .+.++|..++..++-
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 55443 35799999999999999999999999999999999999999876533 334445445544443
No 62
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.54 E-value=3.5e-07 Score=89.23 Aligned_cols=117 Identities=26% Similarity=0.367 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..- +....... + ..... -..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~-~-~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFD-E-KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEc-C-CCeEe----------cceeeEEccc
Confidence 5899999999999999999999999999999999999997421 11111000 0 00000 0012224456
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad 621 (673)
.|...++.+.++ ...++|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 677676665433 34699999999999999999999999865555565555
No 63
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.50 E-value=9.6e-07 Score=90.67 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=53.4
Q ss_pred hHHHHHHHHhh----CC-CEEEEECCCCCCHHHHhhCCeeEEcccccHHHH----hhc-CEEE--cCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQA----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~----~g-~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~----~aa-d~vl--~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.+| .+| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56555555542 35 789999999999999999999999999999999 666 6777 5666889988875
No 64
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.48 E-value=1.1e-06 Score=86.81 Aligned_cols=138 Identities=12% Similarity=0.011 Sum_probs=87.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccccccccccCCccHHHHhhhcCEE--Ee
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SALLGQDKDESIAALPIDELIEKADGF--AG 567 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~ 567 (673)
-+++|++.+.++.|++.|+++.++||........+.+.++........ ..+.+......... -..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 478999999999999999999999999998888888877543222111 11111111100000 0000 01
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.....|..+++.++.....++|+|||.||.+|++.||++++-+.-.+-.++.---...=++|..+...++
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 1135799999998877788999999999999999999988765211212211111222256777777664
No 65
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.46 E-value=3e-07 Score=84.64 Aligned_cols=102 Identities=24% Similarity=0.264 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc--------cccccccccccCCccHHHHhhhcC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--------ALLGQDKDESIAALPIDELIEKAD 563 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 563 (673)
.+-|++++.++.|++.|.+++++||--...+..+|.++||+...+... .+.|-+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 466899999999999999999999999999999999999975222111 111111000
Q ss_pred EEEecChhhHHHHHHHHhhC--CCEEEEECCCCCCHHHHhhCCeeEEcc
Q 005866 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA 610 (673)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~AdvGia~~ 610 (673)
.-....-|.+++..+++. -..++|+|||.||.+|+..||.=|+.+
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 011135688999888874 347999999999999999988777765
No 66
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.35 E-value=6.6e-07 Score=86.55 Aligned_cols=92 Identities=24% Similarity=0.315 Sum_probs=69.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh-h-
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE-H- 572 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-~- 572 (673)
+++++.|+.++++|++++++||+....+..+++.+|++... +.+..... .. ......+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~~---------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-NG---------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-TT---------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-cc---------cceeeeeECCCCCC
Confidence 78889999999999999999999999999999999996421 11111100 00 11234555555 4
Q ss_pred -HHHHHHHH------hhCCCEEEEECCCCCCHHHHh
Q 005866 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (673)
Q Consensus 573 -K~~iv~~l------~~~g~~v~~iGDg~ND~~al~ 601 (673)
|...++.+ +.....++++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 455789999999999999996
No 67
>PLN02954 phosphoserine phosphatase
Probab=98.33 E-value=5.7e-06 Score=82.29 Aligned_cols=125 Identities=22% Similarity=0.293 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCc-------cccccccccccCCccHHHHhhhcC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSS-------ALLGQDKDESIAALPIDELIEKAD 563 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 563 (673)
+++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+... .+.|.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~--------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENE--------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCC---------------
Confidence 478999999999999999999999999999999999999863 111110 011100000
Q ss_pred EEEecChhhHHHHHHHHhhC--CCEEEEECCCCCCHHHHhh--CCeeEEcccc--cHHHHhhcCEEEcCCChhHHHHH
Q 005866 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~--AdvGia~~~~--~~~a~~aad~vl~~~~~~~i~~~ 635 (673)
. ...+..|...++.+.++ ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+...
T Consensus 149 ~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 P--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred c--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 0 00123466777666543 2468999999999999888 5666665532 2334456899884 46666543
No 68
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.27 E-value=5.5e-06 Score=82.11 Aligned_cols=133 Identities=12% Similarity=0.038 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccccccccccCCccHHHHhhhcCE--EEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADG--FAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~ 567 (673)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +....+. ...+.+.......... .. +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p---------~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP---------CDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC---------ccccccc
Confidence 68999999999999999999999999998888888887 6431110 0111111110000000 00 000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHh--hcCEEEcCCChhHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~--aad~vl~~~~~~~i~~~i 636 (673)
.....|..+++.++.....++|+|||.||.+|.+.||+.++-+.-.+.+++ .+.+.+ ++|..+...+
T Consensus 144 ~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 001348888888887777899999999999999999997774321122222 233333 5577666655
No 69
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.16 E-value=1.6e-05 Score=79.04 Aligned_cols=128 Identities=16% Similarity=0.136 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ...+.+.... .....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 468899999999999999999999999999888999999985321 1111111000 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEccc----ccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~----~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
+--..+++.++.....++++||+.||+.|.+.|++ +|.+.. ..+.....+++++ +++..+...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 32344555555556679999999999999999998 555532 2344455688887 6688888877543
No 70
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.15 E-value=4.1e-06 Score=79.90 Aligned_cols=101 Identities=21% Similarity=0.213 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..-.......... ...... ...-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~---g~~~g~--------~~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDN---GLLTGP--------IEGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCC---CEEeCc--------cCCcccCCcc
Confidence 36899999999999999999999999999999999999985211000000000 000000 0000124467
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhC
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~A 603 (673)
.|...++.+.+. ...++++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899888887654 34689999999999999875
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.14 E-value=8.6e-06 Score=78.40 Aligned_cols=114 Identities=15% Similarity=0.049 Sum_probs=75.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE-ecC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA-GVF 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~ 569 (673)
-+++|++.+.++.|++.|+++.++|+........+.+..|+.... ..++ +.+...... ..+.....++..+. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFDND-GRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceECCC-CcEEEecCCCCccCcCCC
Confidence 478999999999999999999999999999999988888875321 0111 111000000 00000000000111 112
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 570 PEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 570 p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
...|..+++.++.+ ...++++|||.||..|.+.||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23588999998887 7889999999999999999987654
No 72
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.12 E-value=1.8e-05 Score=78.36 Aligned_cols=126 Identities=18% Similarity=0.212 Sum_probs=93.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccc-cccccccCCccHHHHhhhcCEEEec
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG-QDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
...+-|++++++..|+++|++..++|+++...+..+.+..|+..... .+.| .... ....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~~-----------------~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDVP-----------------PPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCCC-----------------CCCc
Confidence 45677899999999999999999999999999999999999864321 1111 1110 1223
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCC---eeEEccc--ccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad---vGia~~~--~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.|.....+++.+....+.++||||..+|..|-++|+ ||+..|. ........+|.++ +++..+...+.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 466666667776665447999999999999999998 6677763 4556666799998 44777766553
No 73
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.10 E-value=1e-05 Score=78.94 Aligned_cols=108 Identities=17% Similarity=0.117 Sum_probs=76.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEE-Eec
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF-AGV 568 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 568 (673)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..- +........+ ..... .+. ..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g----------~~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTG----------NIDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeC----------CccCCCC
Confidence 457899999999999999999999999999999999999998531 1111110000 00000 000 123
Q ss_pred ChhhHHHHHHHHhh-CC---CEEEEECCCCCCHHHHhhCCeeEEcc
Q 005866 569 FPEHKYEIVKRLQA-RK---HICGMTGDGVNDAPALKKADIGIAVA 610 (673)
Q Consensus 569 ~p~~K~~iv~~l~~-~g---~~v~~iGDg~ND~~al~~AdvGia~~ 610 (673)
.++.|...++.+.+ .+ ..+.++||+.+|.||++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 45778877766543 33 36899999999999999999999886
No 74
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.08 E-value=1.1e-05 Score=81.72 Aligned_cols=148 Identities=18% Similarity=0.152 Sum_probs=95.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--C--CCc-ccccc-cc-c---------------
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y--PSS-ALLGQ-DK-D--------------- 547 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~--~~~-~~~~~-~~-~--------------- 547 (673)
..+..|...++++++++.|+.++++||+.......+.+++++..+. + ... ++.+. .. +
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456789999999999999999999999999999999988875431 1 000 00000 00 0
Q ss_pred ---------c-----c-----------cCCcc----H---HHHhhh--cCE---EE-----ecCh--hhHHHHHHHHhhC
Q 005866 548 ---------E-----S-----------IAALP----I---DELIEK--ADG---FA-----GVFP--EHKYEIVKRLQAR 583 (673)
Q Consensus 548 ---------~-----~-----------~~~~~----~---~~~~~~--~~v---~~-----~~~p--~~K~~iv~~l~~~ 583 (673)
. . ..... + .+.+.. ..+ ++ ...| ..|..-++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 0 00000 1 111111 011 11 2233 5677777777553
Q ss_pred ----CCEEEEECCCCCCHHHHhh-CCeeEEcccccHHHHhhcC-------EEEcCCChhHHHHHHH
Q 005866 584 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 637 (673)
Q Consensus 584 ----g~~v~~iGDg~ND~~al~~-AdvGia~~~~~~~a~~aad-------~vl~~~~~~~i~~~i~ 637 (673)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999998887543 5555556677777764
No 75
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.95 E-value=5.4e-05 Score=74.11 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+....+.+|+.... ...+...+. ...+..|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885311 011111000 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-c--cc--ccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--AD--ATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~--~~--~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
-=..+++.++-....++|+||+.+|..+.+.|++... + |. ..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 3344455555445679999999999999999998632 2 32 2344566789887 4466665543
No 76
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.89 E-value=1.7e-05 Score=79.50 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhC-C---CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC----EEEcCCChhHHHHHHHH
Q 005866 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 638 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad----~vl~~~~~~~i~~~i~~ 638 (673)
..|...++.+.++ | ..++++||+.||.+|++.++.||+|+++.+..|+.|| +|...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 4677777776543 2 3589999999999999999999999999999999999 77777788899988853
No 77
>PLN02382 probable sucrose-phosphatase
Probab=97.88 E-value=7e-05 Score=81.05 Aligned_cols=67 Identities=24% Similarity=0.206 Sum_probs=52.1
Q ss_pred hhHHHHHHHHhhC-------CCEEEEECCCCCCHHHHhhCC-eeEEcccccHHHHhhc--------CEEEc-CCChhHHH
Q 005866 571 EHKYEIVKRLQAR-------KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVII 633 (673)
Q Consensus 571 ~~K~~iv~~l~~~-------g~~v~~iGDg~ND~~al~~Ad-vGia~~~~~~~a~~aa--------d~vl~-~~~~~~i~ 633 (673)
..|..-++.+.+. ...++++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +++-++|.
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~ 253 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGII 253 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHH
Confidence 4587777777544 247899999999999999999 6999999999888743 55544 45677888
Q ss_pred HHHH
Q 005866 634 SAVL 637 (673)
Q Consensus 634 ~~i~ 637 (673)
++++
T Consensus 254 ~al~ 257 (413)
T PLN02382 254 QAIG 257 (413)
T ss_pred HHHH
Confidence 7774
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.88 E-value=4.2e-05 Score=68.85 Aligned_cols=118 Identities=15% Similarity=0.069 Sum_probs=75.9
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
....++++++.+.++.|++.|++++++||.....+....+.+|+.... ...+....... ...............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAI-YYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhh-hcccccccccccccccCC
Confidence 345689999999999999999999999999999999999999873210 11111000000 000000000001112334
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhh-CCeeEE
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~-AdvGia 608 (673)
..|+.+..+.+.+......++++||+.||+.|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 55666667777776666789999999999999998 444444
No 79
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.84 E-value=6.5e-05 Score=74.61 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.5
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
.+..-+++.++|++|++.|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556667999999999999999999999999999999999974
No 80
>PRK08238 hypothetical protein; Validated
Probab=97.77 E-value=0.00013 Score=80.25 Aligned_cols=99 Identities=14% Similarity=0.193 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111110 1134566
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA 615 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~ 615 (673)
.|...+...... +.+.++||+.||.|+++.|+-.++++.+...
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 676554432222 2257899999999999999999999855443
No 81
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.76 E-value=0.00015 Score=71.47 Aligned_cols=124 Identities=19% Similarity=0.149 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-. ..++...+.. .....|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999998888888889885321 1111111000 0122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee---EEcccc-c-HHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADA-T-DAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG---ia~~~~-~-~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--.++++.+......++||||+.+|..|-++|++- +.-|.. . +.....+|.++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 33445555554456799999999999999999974 333322 2 23344588887 4577776654
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.75 E-value=0.00018 Score=73.75 Aligned_cols=126 Identities=15% Similarity=0.151 Sum_probs=82.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.++++.|++.|+++.++|+.+...+..+....|+.... ..++.+.+.. .....|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478899999999999999999999999988888888888874211 0111111000 001112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEc--c--cccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV--A--DATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~--~--~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+-=..+.+.+.-....++|+||+.||+.|.+.|++. +++ | ...+..+..+|.++ +++..+..++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 212334444443456799999999999999999973 444 3 12333455788888 45777776543
No 83
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.73 E-value=0.00021 Score=70.87 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
+.+.++|+.|+++|++++++||++...+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999975
No 84
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.68 E-value=0.00018 Score=70.77 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=79.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... ..++.+.+.. .....|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999988899999999985321 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-c--ccc--cHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~--~~~--~~~a~~aad~vl~~~~~~~i~~ 634 (673)
-=..+.+.+......++++||+.||..|.+.|++-.. + |.+ .+.....+|.++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2233444444444679999999999999999997643 3 322 123334688887 44665543
No 85
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.60 E-value=0.00015 Score=73.89 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHhCCC--C-CC---C--CCc----ccc----------------
Q 005866 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-NM---Y--PSS----ALL---------------- 542 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~-~gi~v~m~TGD~~~~a~~ia~~~gi~--~-~~---~--~~~----~~~---------------- 542 (673)
.+-+++.++|+.|++ .|+.++++||++......+.+.+++. . +. . ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999998 79999999999999888887766532 1 00 0 000 000
Q ss_pred ---cccccc----------ccCC--ccHHHHh----hhcC--------EEEecCh--hhHHHHHHHHhhC----CCEEEE
Q 005866 543 ---GQDKDE----------SIAA--LPIDELI----EKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (673)
Q Consensus 543 ---~~~~~~----------~~~~--~~~~~~~----~~~~--------v~~~~~p--~~K~~iv~~l~~~----g~~v~~ 589 (673)
|...+. .... ..+..+. +... -+-.+.| .+|..-++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0000 0011111 1111 1122233 4787777765443 357999
Q ss_pred ECCCCCCHHHHhhC----CeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 590 iGDg~ND~~al~~A----dvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
+||+.||.+|++.+ +.||+||++.+ .|++.|. +-..+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCC--CHHHHHHHH
Confidence 99999999999999 99999998753 4667774 455555554
No 86
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.51 E-value=0.00055 Score=68.28 Aligned_cols=126 Identities=13% Similarity=0.093 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.+.. .....|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTLA-----------------ERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcCC-----------------CCCCCHH
Confidence 57899999999999999999999999988888777888875321 1111111000 1122343
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-Ec--ccc--cH-HHHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV--ADA--TD-AARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~--~~~--~~-~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
-=..+++.+.-....++||||+.||..|-+.|++.. ++ |.. .+ .....+|+++ +++..+...+.|
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~~ 226 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhcC
Confidence 334556666655677999999999999999999763 33 321 11 2234588888 447776665443
No 87
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.48 E-value=0.00071 Score=66.93 Aligned_cols=125 Identities=17% Similarity=0.167 Sum_probs=80.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.++.||+.+.++.|++.|+++.++|+-.......+.+.+|+.. +.. ..++.+.+.. ..+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 4789999999999999999999999999999999988888751 111 1111111110 01122
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCeeEE--cccc--c--HHHHhhcCEEEcCCChhHHHHH
Q 005866 570 PEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA--VADA--T--DAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 570 p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvGia--~~~~--~--~~a~~aad~vl~~~~~~~i~~~ 635 (673)
|+-=...++.+.-. ...++|+||+.+|..+-+.|++..+ +..| + ......+|.++ +++..+..+
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 33223333444333 3579999999999999999999863 3222 1 12233467776 446665543
No 88
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.48 E-value=0.00085 Score=68.03 Aligned_cols=97 Identities=15% Similarity=0.076 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..... ..++.+.+.. .....|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467899999999999999999999999998888888888753211 1122111110 1122233
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCee
Q 005866 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-=...++.+.-. .+.++||||..+|..+-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444432 34699999999999999999965
No 89
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.46 E-value=0.00057 Score=67.77 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=77.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.++++.|++.|+++.++|+........+.+.+|+.... ..++.+.... ..+..|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 467899999999999999999999999998888999999875321 1111111000 011222
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc-cc---ccHHHHhhcCEEEcCCChhHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~-~~---~~~~a~~aad~vl~~~~~~~i~ 633 (673)
+-=..+.+.+.-..+.++|+||+.||+.+.+.|++.... .. +.+.-...+|.++ .++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 211222333332335699999999999999999987543 22 2222233577776 3366554
No 90
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.42 E-value=0.0021 Score=65.03 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=82.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----------CCccccccccccccCCccHHHHhh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------PSSALLGQDKDESIAALPIDELIE 560 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 560 (673)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... ....+.|.. .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~------------ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G------------ 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C------------
Confidence 5689999999999999999999999999999999999999853211 011111210 0
Q ss_pred hcCEEEecChhhHHHHHH-----HHh--hCCCEEEEECCCCCCHHHHhhC---CeeEEcc--ccc-----HHHHhhcCEE
Q 005866 561 KADGFAGVFPEHKYEIVK-----RLQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-----DAARSASDIV 623 (673)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~-----~l~--~~g~~v~~iGDg~ND~~al~~A---dvGia~~--~~~-----~~a~~aad~v 623 (673)
--+....|.+.+. .++ .....|+++|||.||++|..-. .--+.+| +.. +.=+++=|+|
T Consensus 186 -----P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -----PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -----CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011134544332 222 2345799999999999996554 2234444 322 2344678999
Q ss_pred EcCCChhHHHHHH
Q 005866 624 LTEPGLSVIISAV 636 (673)
Q Consensus 624 l~~~~~~~i~~~i 636 (673)
+.+|.=-.++..|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9988655555544
No 91
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.42 E-value=0.0016 Score=65.74 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~ 533 (673)
+..-+.+.++|++|++.|+.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999854
No 92
>PRK11590 hypothetical protein; Provisional
Probab=97.38 E-value=0.00092 Score=65.76 Aligned_cols=106 Identities=13% Similarity=0.035 Sum_probs=74.4
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCE-EEecC
Q 005866 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG-FAGVF 569 (673)
Q Consensus 492 ~lr~~~~~~I-~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~ 569 (673)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+.. ...+.+.+.+.... -.+ -..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEc----------cEECCccCC
Confidence 4589999999 57888999999999999999999999998521 01112222211000 001 12355
Q ss_pred hhhHHHHHHHH-hhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 570 p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
.+.|.+-++.. ........+-||+.||.|||+.|+-+++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 68898877654 4334456688999999999999999999974
No 93
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.38 E-value=0.00076 Score=66.14 Aligned_cols=107 Identities=12% Similarity=0.048 Sum_probs=74.0
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~-~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++|++.+.|+ .+++.|++++++|+-....+..+++..++... ..+.+.+.+.. +. ..+ .-..+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~g---g~~-----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NG---GWV-----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CC---ceE-----cCccCCC
Confidence 46899999996 78889999999999999999999988665321 11122222110 00 000 0123556
Q ss_pred hhHHHHHHHH-hhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 571 EHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 571 ~~K~~iv~~l-~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
++|.+-++.. ........+-||+.||.|||+.||..++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3233455688999999999999999999963
No 94
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.36 E-value=0.0016 Score=66.61 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=63.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-.. ..++.+.+.. ..+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 567899999999999999999999999888777777776542111 1111111100 0112222
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCe
Q 005866 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI 605 (673)
Q Consensus 572 ~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~Adv 605 (673)
-=....+.+.-. ...++||||+.+|..+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 223333344332 2569999999999999999996
No 95
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.35 E-value=0.002 Score=65.94 Aligned_cols=121 Identities=13% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+.... . .++.+.+. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCC------------------C--CCHH
Confidence 56799999999999999999999999999999999999985321 0 11111000 0 0111
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-c--ccccH--HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADATD--AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~--~~~~~--~a~~aad~vl~~~~~~~i~~~i 636 (673)
-=..+++.++-....++||||+.+|..+-++|++-.. + |..+. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1122223333334579999999999999999997632 2 32222 2334689888 5577777654
No 96
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.26 E-value=0.0019 Score=65.58 Aligned_cols=122 Identities=18% Similarity=0.107 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. .....|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999888888888875311 1122221110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-Ec-ccccHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~-~~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
-=...++.+.-....++||||..+|+.|-+.|++-. ++ |.........+|.++ ++++.+..
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~~ 232 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLSV 232 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHHH
Confidence 223444555545567999999999999999999743 33 322222333578877 44655543
No 97
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.25 E-value=0.0021 Score=61.07 Aligned_cols=146 Identities=20% Similarity=0.221 Sum_probs=92.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccc-------c------ccCCccHHHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD-------E------SIAALPIDEL 558 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~ 558 (673)
++-||+.++++.|++.= ..+++|-.-.+-+..+|..+|++......-.+.-++.. + ..+...-+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 45689999999997644 45566666778889999999985322111100000000 0 0001111112
Q ss_pred hhhc-CEEEecChhhHHHHHHHHh---------------hC---CCEEEEECCCCCCHHHHhhCC-e-eEEcc-cccHHH
Q 005866 559 IEKA-DGFAGVFPEHKYEIVKRLQ---------------AR---KHICGMTGDGVNDAPALKKAD-I-GIAVA-DATDAA 616 (673)
Q Consensus 559 ~~~~-~v~~~~~p~~K~~iv~~l~---------------~~---g~~v~~iGDg~ND~~al~~Ad-v-Gia~~-~~~~~a 616 (673)
.++. .+|.|+.|.+-.+++...+ +. ....+++||++.|+.||+.+. - |+|++ ||.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 2221 2577777765444444433 22 234688999999999999875 3 48887 888888
Q ss_pred HhhcCEEEcCCChhHHHHHHHH
Q 005866 617 RSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 617 ~~aad~vl~~~~~~~i~~~i~~ 638 (673)
..-||+.+..++...+..+|..
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8899999999999988888754
No 98
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.23 E-value=0.0011 Score=74.22 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=39.3
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
|.+.-.|. .-+.+.++|+.|+++|+.++++||+....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 4457899999999999999999999999999999999874
No 99
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.20 E-value=0.0025 Score=64.36 Aligned_cols=116 Identities=12% Similarity=0.141 Sum_probs=78.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+.+.. .....|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 56789999999999999999999999999999988999985321 1122222110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-Ecccc-c--HHHHhhcCEEEcC
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA-T--DAARSASDIVLTE 626 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~~~~-~--~~a~~aad~vl~~ 626 (673)
-=....+.++-....++||||..+|..+-++|++-. ++..+ . +.....+|.++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 334455555555567999999999999999999753 23222 1 2223467888754
No 100
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.01 E-value=0.0025 Score=62.27 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~g 530 (673)
++.+++.+++++|++.|++++++||+.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999998888754
No 101
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.01 E-value=0.0011 Score=64.39 Aligned_cols=94 Identities=18% Similarity=0.101 Sum_probs=67.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++.+.+ +..+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4556778899999999999999999999999999999999985321 11111110 111334
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhC
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~A 603 (673)
|+--..+++.+.-....++||||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5544555666665666899999999999987764
No 102
>PRK11587 putative phosphatase; Provisional
Probab=96.97 E-value=0.0043 Score=61.30 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.++++.|+++|+++.++|+.....+...-+..|+.. ...++.+.+.. .....|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc-----------------CCCCCcH
Confidence 578999999999999999999999988766666556666631 11111111000 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEccccc-HHHHhhcCEEEc
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 625 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~-~~a~~aad~vl~ 625 (673)
-=....+.+.-....++||||..+|+.+-+.|++- |++..+. ......+|.++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 33334444544457899999999999999999985 5554332 222345777763
No 103
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.97 E-value=0.0025 Score=58.66 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=71.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
.++|+-++.++.+++.+++++++|+-.......+-++++=-.......++..+.. ....-.-.++.. ....--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~---ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDY---IHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCce---EcCCCceeeecC---CccccCC
Confidence 5789999999999999999999998887666666666551111000000000000 000000000000 0112246
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
+|...|+.+++..+.+.|||||+.|..|-+.+|+=.|=
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 89999999999999999999999999998888876654
No 104
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.96 E-value=0.01 Score=69.64 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=46.3
Q ss_pred hhHHHHHHHHhhC--CCEEEEECCCCCCHHHHhhC---CeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~A---dvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.+|...++.+.+. ...++++||+.||.+|++.+ +.+|+||++ +.+|++.+.++ +.+...++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 5788888887763 24799999999999999996 588888874 45788888653 55555553
No 105
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.93 E-value=0.0035 Score=61.93 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh-
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP- 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p- 570 (673)
++.|++.++++.|++.|++++++|+-+........+.+|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998887777777888874211 11111111 111223
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee-EEcc
Q 005866 571 -EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVA 610 (673)
Q Consensus 571 -~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG-ia~~ 610 (673)
+-=..+.+.+.-....++||||.. +|+.+-+.|++- |.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 222333344433445799999998 999999999974 4454
No 106
>PRK06769 hypothetical protein; Validated
Probab=96.90 E-value=0.0043 Score=58.91 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=58.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCE
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG 564 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (673)
+.|++.++++.|++.|+++.++|+.... ......+..|+..- +......+.+. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 12222334454310 00000000000 0
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
..+..|+-=..+++.+....+.++||||..+|..+-++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222332244455554445679999999999999999997643
No 107
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.86 E-value=0.0027 Score=63.95 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHH-----HHhh---cC-EEEcCCChhHHHHHH
Q 005866 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSA---SD-IVLTEPGLSVIISAV 636 (673)
Q Consensus 570 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~-----a~~a---ad-~vl~~~~~~~i~~~i 636 (673)
...|...++.++++ .+.|+++||+.||.+||..++-||.++|+.+. .... .. +.-..+.-.+|.+++
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 36788888888765 23578899999999999999999999998777 2222 22 344455667777776
Q ss_pred H
Q 005866 637 L 637 (673)
Q Consensus 637 ~ 637 (673)
+
T Consensus 243 ~ 243 (247)
T PF05116_consen 243 Q 243 (247)
T ss_dssp H
T ss_pred H
Confidence 5
No 108
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.86 E-value=0.0043 Score=68.69 Aligned_cols=124 Identities=11% Similarity=0.071 Sum_probs=81.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999998885321 1111111110 011232
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcc--cccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~--~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
-=...++.++ ...++++||+.+|+.+-+.|++- |++. .+.+.....+|+++ ++++.+...+...
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 1122222222 35699999999999999999974 4443 22222234588887 4577777766443
No 109
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.84 E-value=0.0034 Score=62.38 Aligned_cols=89 Identities=19% Similarity=0.224 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
.+.|++.+.++.|++.|+++.++||+. ..++..+.+..|++........+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467789999999999999999999964 5688888888998522111111111100
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.-.+|... +++.+ .++|+||..+|..+-+.|++-
T Consensus 173 -~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -GQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 01344443 34444 488999999999999999965
No 110
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.82 E-value=0.0076 Score=57.65 Aligned_cols=127 Identities=21% Similarity=0.124 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
.+.||+.++++.|++.|+++.++|..+. .....+-+..|+.- . ..+....... ..
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~-~i~~~~~~~~----~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---D-GIYYCPHHPE----DG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---c-eEEECCCCCC----CC--
Confidence 3679999999999999999999998752 11112223344410 0 0000000000 00
Q ss_pred HHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEccccc--H-HHHhhc--CEEEcCCChh
Q 005866 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT--D-AARSAS--DIVLTEPGLS 630 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~--~-~a~~aa--d~vl~~~~~~ 630 (673)
.-.....|+--...++.+.-..+.++||||+.+|+.+-+.|++. |.+..|. . .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00112223333445555555557899999999999999999975 2232322 1 112234 7776 4477
Q ss_pred HHHHHH
Q 005866 631 VIISAV 636 (673)
Q Consensus 631 ~i~~~i 636 (673)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666654
No 111
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.77 E-value=0.0046 Score=64.40 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=75.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
..+++.|++.++++.|++.|++++++||.....+..+.+.+|+....+. .+.+.+. ....+... --.+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc--------hhhhcccC-CCCCC
Confidence 5789999999999999999999999999999999999999887531111 1111110 00000000 01234
Q ss_pred ChhhHHHHHHHHhh-CCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 569 FPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 569 ~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
.|+-+...++.+.. ....++|+||..+|+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46677777766543 3368999999999999999999874
No 112
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.71 E-value=0.0065 Score=62.69 Aligned_cols=123 Identities=19% Similarity=0.134 Sum_probs=73.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+-+......+-+..+...-...-..+.+.+.. .....|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 57899999999999999999999998877666655544321100000011111000 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc-ccc--cHHHHhhcCEEEcCCChhHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~-~~~--~~~a~~aad~vl~~~~~~~i~ 633 (673)
-=..+.+.+.-....++||||+.+|+.|-+.|++.... ..| .......+|+++. ++..+.
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~--~~~~l~ 269 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD--CLGDVP 269 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC--Chhhcc
Confidence 22444555554556799999999999999999977443 232 2111235788873 344443
No 113
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.71 E-value=0.0062 Score=54.85 Aligned_cols=93 Identities=16% Similarity=0.148 Sum_probs=63.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhc
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (673)
-++.|++.++++.|+++|+++.++|+.. ........+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 66677788888874110 00000 0
Q ss_pred CEEEecChhhHHHHHHHHh-hCCCEEEEECC-CCCCHHHHhhCCee
Q 005866 563 DGFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADIG 606 (673)
Q Consensus 563 ~v~~~~~p~~K~~iv~~l~-~~g~~v~~iGD-g~ND~~al~~AdvG 606 (673)
.....|+-=..+++.++ -....++|||| ..+|+.+-+.+++-
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01112222234455552 44567999999 59999999998864
No 114
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.68 E-value=0.012 Score=62.34 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. .....|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985311 1111111100 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-EcccccHHH-HhhcCEEEcCCChhHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATDAA-RSASDIVLTEPGLSVII 633 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~~~~~~~a-~~aad~vl~~~~~~~i~ 633 (673)
-=...++.++-....++|+||..+|+.|-+.|++-. ++..+.+.. ...||+++ +++..+.
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHHH
Confidence 224445555555678999999999999999999753 333332222 23588887 4466663
No 115
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.65 E-value=0.0039 Score=61.99 Aligned_cols=89 Identities=19% Similarity=0.187 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f--~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN--PVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe--eEEECCCCCC-------------------C
Confidence 34455999999999999999999998 667889999999995311 1111111110 0
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
..| +|.. .+++.+ .++|+||..||..+-+.|++-
T Consensus 173 ~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 2332 344444 478999999999999999864
No 116
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.63 E-value=0.0053 Score=60.95 Aligned_cols=99 Identities=11% Similarity=0.024 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh-
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP- 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p- 570 (673)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+.... ..++.+.+ +.+..|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 67899999999999999999999998887777777777764211 11111110 111122
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee--EEccc
Q 005866 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVAD 611 (673)
Q Consensus 571 -~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG--ia~~~ 611 (673)
+-=....+.+.-....++|+||..+|+.+-+.|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 211233344443455799999999999999999996 44444
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.62 E-value=0.0068 Score=58.83 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+-+........+.+|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 57899999999999999999999998888888888888874211 11111110 0112232
Q ss_pred hH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 572 ~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
.. ..+.+.+.-....+++|||+.+|+.+-+.|++-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 21 3344444444567999999999999999998753
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.44 E-value=0.012 Score=58.24 Aligned_cols=119 Identities=12% Similarity=0.103 Sum_probs=74.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+-.........+.+|+.... ..++...+. ....|.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-------------------CCCCCC
Confidence 5789999999999999 999999999888888888888885321 111111100 011232
Q ss_pred hH--HHHHHHH-hhCCCEEEEECCCC-CCHHHHhhCCee-EEcc--cccHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HK--YEIVKRL-QARKHICGMTGDGV-NDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K--~~iv~~l-~~~g~~v~~iGDg~-ND~~al~~AdvG-ia~~--~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
.. ...++.+ .-....++||||+. +|..+-+.+++- |.+. ..++.....++.++ ++++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 22 3334444 33345699999998 899999999963 3332 22222223456666 44665554
No 119
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.40 E-value=0.016 Score=54.74 Aligned_cols=108 Identities=10% Similarity=0.100 Sum_probs=71.1
Q ss_pred HHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCC
Q 005866 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMG 532 (673)
Q Consensus 454 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~-~~~a~~ia~~~gi~ 532 (673)
+.+.|.+.+.+-... ++.-. =...+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 456788887775432 11100 123577999999999999999999999987 56677777777763
Q ss_pred CCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee
Q 005866 533 TNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (673)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG 606 (673)
.. +....|... ..+.+.+......++||||.. .|..+-+.|++-
T Consensus 85 ~~------------------------------~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL------------------------------PHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE------------------------------cCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 001122211 223333333345699999998 799999999974
No 120
>PTZ00174 phosphomannomutase; Provisional
Probab=96.38 E-value=0.0025 Score=64.32 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=46.5
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CCCCHHHHhhC-CeeEEcccccHHHHhhcCEEE
Q 005866 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~al~~A-dvGia~~~~~~~a~~aad~vl 624 (673)
.+|..-++.+.+....|+++|| |.||.+||+.| -.|++++|+++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 6799999988877788999999 99999999987 688888899999998776543
No 121
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.36 E-value=0.006 Score=58.35 Aligned_cols=94 Identities=11% Similarity=0.039 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|+++|+++.++|+... +....+.+|+.... ...+.+.+.. ..+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC-----------------CCCCChH
Confidence 5789999999999999999999997532 34566777774221 1111111100 1112222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-=....+.+.-....++||||+.+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 21233333333345699999999999999999975
No 122
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.34 E-value=0.0037 Score=58.75 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=68.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
..++.|++.+.++.|++.|++++++|+.+........+.+|+... . ..++...+.. .....
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f-~~i~~~~~~~-----------------~~Kp~ 135 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-F-DEIISSDDVG-----------------SRKPD 135 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-C-SEEEEGGGSS-----------------SSTTS
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-c-ccccccchhh-----------------hhhhH
Confidence 346789999999999999999999999999988899999987521 1 1111111110 01111
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
|+-=..+++.+.-....+++|||+.+|+.+-+.|++-
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 2222445555555567799999999999999999864
No 123
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.29 E-value=0.015 Score=55.42 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+. -.....|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 678999999999999999999999988776 5555557774211 111111100 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-=..+.+.+......++++||...|+.+-+.+++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 23444455544556899999999999999988873
No 124
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.28 E-value=0.021 Score=54.35 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=65.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCC-CCCc-cccccc-cccccCCcc
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNM-YPSS-ALLGQD-KDESIAALP 554 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~---------------~a~~ia~~~gi~~~~-~~~~-~~~~~~-~~~~~~~~~ 554 (673)
+.|++.++++.|+++|+++.++|.-+.. ....+..+.|+.-.. +... ...+.. ...
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~------ 100 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQ------ 100 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccC------
Confidence 5789999999999999999999976531 111222233332000 0000 000000 000
Q ss_pred HHHHhhhcCEEEecChh--hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE--EcccccH---HHHhhcCEEEcCC
Q 005866 555 IDELIEKADGFAGVFPE--HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI--AVADATD---AARSASDIVLTEP 627 (673)
Q Consensus 555 ~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi--a~~~~~~---~a~~aad~vl~~~ 627 (673)
-.....|. -=....+.+.-....++||||..+|+.+-++|++.. .+..|.. .....+|.++ +
T Consensus 101 ---------~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~ 169 (176)
T TIGR00213 101 ---------VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--N 169 (176)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--c
Confidence 00111232 222333334434467999999999999999999853 4433321 1223478887 3
Q ss_pred ChhHH
Q 005866 628 GLSVI 632 (673)
Q Consensus 628 ~~~~i 632 (673)
++..+
T Consensus 170 ~~~el 174 (176)
T TIGR00213 170 SLADL 174 (176)
T ss_pred cHHHh
Confidence 45544
No 125
>PRK09449 dUMP phosphatase; Provisional
Probab=96.14 E-value=0.025 Score=56.00 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|+ .|+++.++|......+...-+..|+.... ..++.+.+.. .....|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC-----------------CCCCCHH
Confidence 46799999999999 68999999998887777777778874211 1111111000 0111122
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCC-CCHHHHhhCCee-EEcc-cccH-HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~-g~~v~~iGDg~-ND~~al~~AdvG-ia~~-~~~~-~a~~aad~vl~~~~~~~i~~~i 636 (673)
-=..+++.+.-. ...++||||+. +|+.+-+.|++- |.+. .+.. .....+|.++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 113334444322 24699999998 799999999985 4443 2221 1112467777 4477766554
No 126
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.08 E-value=0.011 Score=56.64 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=60.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.||+.++++.|++.|+++.++|+. ..+..+.+.+|+..-. ..++.+.+ ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCC
Confidence 468899999999999999999999987 5566777778874211 11111100 011223
Q ss_pred hhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 571 EHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 571 ~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
... ..+.+.+.-....++++||+.+|+.+-+.|++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 221 223333333345689999999999999999875
No 127
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.06 E-value=0.036 Score=51.58 Aligned_cols=101 Identities=14% Similarity=0.176 Sum_probs=64.5
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHh---C--CCCCCCCCcccc--ccccccccCCccHHHHh
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSALL--GQDKDESIAALPIDELI 559 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~---~ia~~~---g--i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 559 (673)
+|.+.|++.++++++++.|++++.+||+....+. ....++ | ++. ...+. |.... . .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~---------~-~ 90 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFA---------A-L 90 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchh---------h-h
Confidence 4788999999999999999999999999987764 444442 2 321 11111 10000 0 0
Q ss_pred hhcCEEEecCh-hhHHHHHHHHhh-----CCCEEEEECCCCCCHHHHhhCCee
Q 005866 560 EKADGFAGVFP-EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 560 ~~~~v~~~~~p-~~K~~iv~~l~~-----~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.+ .+.. ..| +.|...++.+.+ ....++.+||+.+|+.+-+++++-
T Consensus 91 ~~-e~i~-~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 91 HR-EVIS-KKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred hc-cccc-CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 00 1122 223 347777777665 345677899999999998887764
No 128
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.00 E-value=0.013 Score=53.83 Aligned_cols=97 Identities=21% Similarity=0.218 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
++.|++.++++.|++.|+++.++|..+. .......+.+|+.... .+.......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----~~~~~~~~~-------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG----VLFCPHHPA-------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEECCCCCC--------
Confidence 4789999999999999999999998652 3445566677764110 000000000
Q ss_pred HHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.......|.-+ ..+++.+.-..+.++||||...|+.+-+.+++-
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00000123221 233333333345799999999999999998875
No 129
>PLN02940 riboflavin kinase
Probab=95.98 E-value=0.021 Score=61.47 Aligned_cols=115 Identities=20% Similarity=0.182 Sum_probs=71.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+.+.. .....|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC-----------------CCCCCH
Confidence 467999999999999999999999998877766554 56663211 1111111000 011122
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc--cHHHHhhcCEEEc
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVLT 625 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~--~~~a~~aad~vl~ 625 (673)
+-=...++.+.-..+.++|+||+.+|+.+-+.|++. |++..+ .......+|.++.
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 222334444444456799999999999999999977 334332 2323345677663
No 130
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.91 E-value=0.029 Score=53.00 Aligned_cols=110 Identities=6% Similarity=-0.048 Sum_probs=68.4
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhc
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (673)
.....-+-++.|++.++++.|+++|+++.++|+- ....+..+...+|+..... ...+...+. .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-e
Confidence 3334445578899999999999999999999976 8888888888888741000 000000000 0
Q ss_pred CEEEecChhhH--HHHHHHHhhC------CCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 563 DGFAGVFPEHK--YEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 563 ~v~~~~~p~~K--~~iv~~l~~~------g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
.+.+.-.+..| ..+.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 2334444322 35799999999999999999976544
No 131
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.35 E-value=0.024 Score=52.36 Aligned_cols=90 Identities=20% Similarity=0.200 Sum_probs=56.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++... .+.....|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecC------------------CCCCCcCHHH
Confidence 4479999999999999999999999988877776664 3211 1 0111000 0011112222
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHhhCC
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad 604 (673)
=..+.+.+.-.. .++++||..+|..+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 223333443334 7999999999999888764
No 132
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.30 E-value=0.045 Score=53.25 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ..++...+.. .....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC-----------------CCCCCHH
Confidence 57789999999999999999999976543 45666777763211 0111100000 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee
Q 005866 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG 606 (673)
-=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 11233344443456799999997 899999888763
No 133
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.28 E-value=0.029 Score=52.47 Aligned_cols=99 Identities=15% Similarity=0.099 Sum_probs=58.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
++-|++.++++.|++.|+++.++|.-. ...+..+.+.+|+. +. ..+.+.....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd-~ii~~~~~~~-------- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FD-DVLICPHFPD-------- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---ee-EEEECCCCCC--------
Confidence 456899999999999999999999742 33455666677763 11 0111100000
Q ss_pred HHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
.-.....|... ..+++.+......++||||+.+|..+-+.|++-..
T Consensus 97 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 ------DNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00001123211 22233332233469999999999999999997643
No 134
>PLN02811 hydrolase
Probab=95.26 E-value=0.05 Score=53.75 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=57.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH-HHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
-++.|++.+.|+.|++.|+++.++||-....... ..+..++.. .+ ..++.+.+.+. -.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~~---------------~~~KP~ 139 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPEV---------------KQGKPA 139 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhhc---------------cCCCCC
Confidence 3578999999999999999999999887543322 222223321 00 01111110000 000111
Q ss_pred hhhHHHHHHHHh---hCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 570 PEHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 570 p~~K~~iv~~l~---~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
|+-=...++.+. -....++||||+..|+.|-+.|++-.
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 222233344443 23467999999999999999999763
No 135
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.20 E-value=0.33 Score=53.57 Aligned_cols=179 Identities=20% Similarity=0.179 Sum_probs=119.9
Q ss_pred eEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc------------------c
Q 005866 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL------------------L 542 (673)
Q Consensus 481 l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~------------------~ 542 (673)
-.|.|++....+.|++.-..|+.|-++-|+.+-.|-.+....+-.|+++||.........+ .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 3789999999999999999999999999999999999999999999999995422111000 0
Q ss_pred c-------------------ccccc-----------c--------cCCccHHHH-----------------hhhcCEEEe
Q 005866 543 G-------------------QDKDE-----------S--------IAALPIDEL-----------------IEKADGFAG 567 (673)
Q Consensus 543 ~-------------------~~~~~-----------~--------~~~~~~~~~-----------------~~~~~v~~~ 567 (673)
+ ..++. . .....+.++ ---+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0 00000 0 000001110 001126888
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHH--HHhhCCeeEEccc----c---------cHHH-HhhcC----------
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAP--ALKKADIGIAVAD----A---------TDAA-RSASD---------- 621 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~--al~~AdvGia~~~----~---------~~~a-~~aad---------- 621 (673)
++|+.-.++++.+|+.|++++.+|...|--. ..-+||++|++.. + +... .++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 9999999999999999999999999987443 3467899998741 1 1111 11222
Q ss_pred -------EEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccce
Q 005866 622 -------IVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGG 659 (673)
Q Consensus 622 -------~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~ 659 (673)
+-+-...+-.+..+|.-+|.....+|+.++|.++..+.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~ 1099 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLL 1099 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 22222223456677788999888999988888866543
No 136
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.17 E-value=0.079 Score=58.19 Aligned_cols=82 Identities=22% Similarity=0.274 Sum_probs=58.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHH--------HHHHhc------------CCe-----------eEEEECCE
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAA--------ALMARL------------APK-----------GKVLRDGR 143 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~------------~~~-----------~~V~r~g~ 143 (673)
..+..+....++++++.+++.+|++-++++.+ ++.+.. ++. -+..|||+
T Consensus 86 igl~nAsal~LLLLlnilL~grQdRikrr~~eqklRg~~DaI~da~kdgreiq~~nam~~dL~~pfa~s~s~h~afRDGh 165 (1354)
T KOG4383|consen 86 IGLSNASALALLLLLNILLEGRQDRIKRRAFEQKLRGAFDAILDAEKDGREIQKFNAMPKDLEAPFADSASCHSAFRDGH 165 (1354)
T ss_pred eeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccccCccCcHHHHHHHhccCe
Confidence 34556666777778888888888875443322 111111 110 12468999
Q ss_pred EEEEeCCCCCCCcEEEEcCCCeeeceEEEEecC
Q 005866 144 WNEQDASILVPGDIISIKLGDIIPADARLLEGD 176 (673)
Q Consensus 144 ~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~ 176 (673)
..++|..-||.||||-++||+.-||.+.=+++.
T Consensus 166 lm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 166 LMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred eeecceeEEEeccEEEecCCccccccccccCCC
Confidence 999999999999999999999999988766553
No 137
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.14 E-value=0.16 Score=46.54 Aligned_cols=110 Identities=12% Similarity=0.178 Sum_probs=77.6
Q ss_pred HHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 005866 451 IDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530 (673)
Q Consensus 451 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~g 530 (673)
.+.+..+|++.+.+=..+ +++..= ....-|++++=+.+++.+|+++.++|..+...+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 467889999998775544 333321 23456788888999999999999999999999999999999
Q ss_pred CCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhh---CCCEEEEECCCC-CCHHHHhhCCee
Q 005866 531 MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGV-NDAPALKKADIG 606 (673)
Q Consensus 531 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~---~g~~v~~iGDg~-ND~~al~~AdvG 606 (673)
++- ++--..|--+ .+-+++++ .-+.|+||||-. .|+-+=+.|++=
T Consensus 85 v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 85 VPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred Cce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 851 2222234333 34444444 456799999996 788776666643
No 138
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.11 E-value=0.25 Score=49.57 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=59.1
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhc
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (673)
|.+.-.+.+-|++.++++.|+++|+++.++|.-...... ...+++|+..+.. ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~----------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EM----------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ce-----------------------
Confidence 555566788999999999999999999999986554433 4557788753111 11
Q ss_pred CEEEecChhhHHHHHHHHhh---CCCEEEEECCCCCCHHHHhhCC
Q 005866 563 DGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKAD 604 (673)
Q Consensus 563 ~v~~~~~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~al~~Ad 604 (673)
++..- ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 73 -Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 -IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11100 0001122222222 3467999999999998886443
No 139
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.07 E-value=0.028 Score=51.83 Aligned_cols=98 Identities=13% Similarity=-0.014 Sum_probs=64.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+.... ...++.+.+. .+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d~-------------------~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDEC-------------------VFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECccc-------------------cccC
Confidence 3467999999999998 57999999999999999998888874211 1111111111 1111
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
|. =...++.+......++++||..+|..|-+.+++-|..
T Consensus 102 P~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 22 0111233334456899999999999987777666543
No 140
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.85 E-value=0.15 Score=51.54 Aligned_cols=87 Identities=14% Similarity=0.066 Sum_probs=57.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
..++-|++.+.++.|++.|+++.++|+..... +...-+..|+...... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 35577999999999999999999999987433 3355566787531110 1222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHh
Q 005866 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~ 601 (673)
|-....|..-.+.+.+.-.+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 22223344444555555567999999999986543
No 141
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.70 E-value=0.063 Score=54.03 Aligned_cols=67 Identities=21% Similarity=0.198 Sum_probs=48.2
Q ss_pred EecChhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhC--------CeeEEcccccHHHHhhcCEEEcCCChhHHH
Q 005866 566 AGVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~A--------dvGia~~~~~~~a~~aad~vl~~~~~~~i~ 633 (673)
.+..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHH
Confidence 344567888777766543 34799999999999999999 4788886443 3566888884 466666
Q ss_pred HHH
Q 005866 634 SAV 636 (673)
Q Consensus 634 ~~i 636 (673)
..+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 555
No 142
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.64 E-value=0.076 Score=52.34 Aligned_cols=100 Identities=13% Similarity=0.089 Sum_probs=64.1
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC---CCCCCCCCccccccccccccCCccHHHHhhhcCEE
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (673)
++-++.||+.++++.|+++|+++.++|..+......+-+..+ +.. ... ..+. ..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~-------------------~~fd-~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFS-------------------GYFD-TTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcc-------------------eEEE-eCcc
Confidence 345789999999999999999999999888766555544432 211 000 0000 0111
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
....|+-=..+++.+.-....++|+||...|+.|-++|++-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 11122222444555554456799999999999999999986443
No 143
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.40 E-value=0.11 Score=51.38 Aligned_cols=104 Identities=19% Similarity=0.164 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccc-cccccCCccHHHHhhhcCEEEec
Q 005866 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD-KDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 492 ~lr~~~~~~I~~l--~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
|+.|+.++.++.+ ++.|+.+.++|--|...-..+-+.-|+.... ..+++... .+.. -...+..... +-+.++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~-G~l~v~pyh~--h~C~~C 145 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDAD-GRLRVRPYHS--HGCSLC 145 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCC-ceEEEeCccC--CCCCcC
Confidence 6778999999999 4589999999988888888888888875321 11111110 0000 0000000000 123344
Q ss_pred Ch-hhHHHHHHHHhhC----C---CEEEEECCCCCCHHHH
Q 005866 569 FP-EHKYEIVKRLQAR----K---HICGMTGDGVNDAPAL 600 (673)
Q Consensus 569 ~p-~~K~~iv~~l~~~----g---~~v~~iGDg~ND~~al 600 (673)
.| -=|..+++.+... | ..|.+||||.||....
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 44 3688888888764 4 6899999999996533
No 144
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.31 E-value=0.23 Score=48.91 Aligned_cols=89 Identities=18% Similarity=0.244 Sum_probs=55.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
+-|.-|++.+.++.+++.|++|+++||+.... +..--++.|++. +....+.+.... .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~ 177 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------N 177 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------C
Confidence 34777899999999999999999999999755 333334567652 111111110000 0
Q ss_pred ecChhhHHHHHHHHhhCCC-EEEEECCCCCCHH
Q 005866 567 GVFPEHKYEIVKRLQARKH-ICGMTGDGVNDAP 598 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~ 598 (673)
....+-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 178 ~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 178 KTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred chHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0001226666666666765 6777999999963
No 145
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.26 E-value=0.14 Score=45.91 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=33.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 530 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD-~~~~a~~ia~~~g 530 (673)
++.|++.+.++.|++.|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777766666665
No 146
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.24 E-value=0.14 Score=48.11 Aligned_cols=94 Identities=7% Similarity=-0.014 Sum_probs=56.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH------------HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (673)
+-||+.++++.|+++|+++.++|..+.. ....+.+.+|+.. ...+.+.. .
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~-~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHA-G------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCC-C-------------
Confidence 3489999999999999999999965432 3456667777731 01111100 0
Q ss_pred hcCEEEecChhhHHHHHHHHh--hCCCEEEEECCCC--------CCHHHHhhCCeeE
Q 005866 561 KADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGV--------NDAPALKKADIGI 607 (673)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~~l~--~~g~~v~~iGDg~--------ND~~al~~AdvGi 607 (673)
.+....|+-=..+.+.+. -....++||||.. +|..+-++|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111221123334443 2335699999996 6999888887643
No 147
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.00 E-value=0.11 Score=54.98 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=58.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccH
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPI 555 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (673)
-++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.- ...+.+..... +
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~s--d---- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFPE--D---- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcCc--c----
Confidence 467899999999999999999999983 1233455556666631 01111100000 0
Q ss_pred HHHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 556 DELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
...+ ..|... ..+.+.+......++||||+.+|..+-+.|++-.
T Consensus 99 -------~~~~-rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSC-RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCC-CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0001 123222 1122222223467999999999999999999864
No 148
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.96 E-value=0.24 Score=60.43 Aligned_cols=119 Identities=16% Similarity=0.200 Sum_probs=77.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh-
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP- 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p- 570 (673)
.+-||+.+.++.|+++|+++.++|+-....+...-+..|+....+ ..++.+.+ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc-------------------cccCCCC
Confidence 357899999999999999999999998888888888888842111 11111111 112223
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc---cHHHHhhcCEEEcCCChhHH
Q 005866 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 571 -~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~---~~~a~~aad~vl~~~~~~~i 632 (673)
+-=...++.+.-....++++||..+|+.+-+.|++- |++..+ .+.....+|.++.+ +..+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~--l~el 285 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD--IGNI 285 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC--hHHC
Confidence 222344455554556799999999999999999974 444322 23334567777744 5443
No 149
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=93.75 E-value=0.31 Score=46.26 Aligned_cols=51 Identities=22% Similarity=0.347 Sum_probs=42.0
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH---HhCCC
Q 005866 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMG 532 (673)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~---~~gi~ 532 (673)
.+-|.+.++|..-|++.++++.||+++.+|..+|.-..+.-..+.+ ++|+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 5779999999999999999999999999999998776655555544 45653
No 150
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=93.61 E-value=0.34 Score=57.40 Aligned_cols=66 Identities=9% Similarity=0.138 Sum_probs=43.6
Q ss_pred HHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHH-HhCCCeEEEEcCCChHHHHHHHHH
Q 005866 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGRR 528 (673)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~~gi~v~m~TGD~~~~a~~ia~~ 528 (673)
.+..|.....|.+++=|.. +++-.....-.+-++..++++.| ++.|+.++++||+...+....-..
T Consensus 587 i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 587 IVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 3445555556666665544 33321111235567899999997 777999999999999887766543
No 151
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.51 E-value=0.45 Score=45.63 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=32.8
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
.+.+.+.+|+++|++|+.+|.-........-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888888876
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=93.10 E-value=0.1 Score=51.15 Aligned_cols=97 Identities=13% Similarity=0.057 Sum_probs=56.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
-++.|++.+.++.|++.|+++.++|...... ........++... + ..++...+. -....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-F-DAVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-C-CEEEEeeec-----------------CCCCC
Confidence 4678999999999999999999999865432 2222222333110 0 000000000 00111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.|+-=..+.+.+.-....++||||...|+.+-++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 22222333344443445689999999999999999975
No 153
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.85 E-value=0.2 Score=49.32 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=61.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+.. ..+..|
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p 145 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDP 145 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCCh
Confidence 34568999999988 4899999999887777777777775321 11111111100 011112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
+-=....+.+.-....++||||..+|..+-+.|++....
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 222333344443345699999999999999999987653
No 154
>PLN03017 trehalose-phosphatase
Probab=92.31 E-value=3.2 Score=43.90 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=43.0
Q ss_pred hhHHHHHHHHhhC-------CCEEEEECCCCCCHHHHhhC-----CeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQAR-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~-------g~~v~~iGDg~ND~~al~~A-----dvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
-+|...++.+-+. +..++++||...|-.|++.. ++||.+|.... ...|++.| ++-+.+...+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 3788888777542 23689999999999999865 46777774321 24677877 4466666655
No 155
>PLN02580 trehalose-phosphatase
Probab=92.26 E-value=0.26 Score=52.44 Aligned_cols=63 Identities=21% Similarity=0.165 Sum_probs=45.4
Q ss_pred hhHHHHHHHHhhC-C-----C-EEEEECCCCCCHHHHhh-----CCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g-----~-~v~~iGDg~ND~~al~~-----AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.+|...++.+.+. | . .++++||+.||..|++. +++||+|++|.... .|++-|.+ -+.+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HHHHHHHHH
Confidence 4888888776543 2 1 25899999999999996 68999999866433 57787744 566665553
No 156
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=92.13 E-value=0.25 Score=47.90 Aligned_cols=95 Identities=11% Similarity=0.025 Sum_probs=57.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.++++.|++.|+++.++|.-+.......-.. .++... + ..++...+ +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecc-------------------cCCCCC
Confidence 4689999999999999999999998765543322111 222110 0 00110000 011122
Q ss_pred --hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 571 --EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 571 --~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
+-=..+++.+.-....++++||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2213344444444567999999999999999999853
No 157
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=91.89 E-value=0.44 Score=50.00 Aligned_cols=90 Identities=13% Similarity=0.075 Sum_probs=65.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
++.+++.++++.|++.|+.+.++|.-+...+..+-+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6654211 0111
Q ss_pred cChhhHH----HHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 568 VFPEHKY----EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 568 ~~p~~K~----~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
..+.-|. .+.+.+.-....++|+||...|..+.+.+...+.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 1122343 33344433346899999999999999998887644
No 158
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.87 E-value=0.64 Score=43.48 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=76.2
Q ss_pred HHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCC-------ChHHHHH
Q 005866 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIGKE 524 (673)
Q Consensus 454 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi--~v~m~TGD-------~~~~a~~ 524 (673)
+.+.|.|.+.+=..+ ++. .-=++.+-|+..+.+++|++.+. +|+++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL~--~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TLT--PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CCC--CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888774443 110 12357888999999999999987 49999876 3788999
Q ss_pred HHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhC-----CCEEEEECCCC-CCHH
Q 005866 525 TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGV-NDAP 598 (673)
Q Consensus 525 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~-ND~~ 598 (673)
+.+.+|++- -.+....|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 012234576666788888754 56799999984 6777
Q ss_pred HHhhCC
Q 005866 599 ALKKAD 604 (673)
Q Consensus 599 al~~Ad 604 (673)
+=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 655544
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=90.15 E-value=0.37 Score=45.96 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.+++.++++.|+ .+++++|.-+...+....+.+|+... ++ .++...+.... ...+...|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999997 47899999888888888888888431 11 11111100000 000011222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
-=..+++.+......++|+||...|+.+-+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223445555555667999999999999999888753
No 160
>PLN02645 phosphoglycolate phosphatase
Probab=90.12 E-value=0.74 Score=48.12 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=39.0
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 532 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia---~~~gi~ 532 (673)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999977666666 456763
No 161
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=90.09 E-value=0.64 Score=44.38 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=58.6
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHH
Q 005866 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEI 576 (673)
Q Consensus 497 ~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 576 (673)
..+.++.|++. +++.++|+.....+...-+..|+.... ..++...+.. ..+..|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHHHHH
Confidence 36899999865 899999999999988888888875321 1111111100 111222222344
Q ss_pred HHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 577 VKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 577 v~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.+.++.....++++||..+|+.+-+.|++-
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444444445688999999999999999875
No 162
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=89.94 E-value=0.47 Score=45.58 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccc-cccccCCccHHHHhhhcCEEEecC
Q 005866 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD-KDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi-~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
|+-|+..++|+.+++.|. .++++|--|.-....+-+..|+.+-.. .+++... .++ .-...+.... ..+-+.++.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~--~IfTNPa~~da-~G~L~v~pyH-~~hsC~~CP 159 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS--EIFTNPACVDA-SGRLLVRPYH-TQHSCNLCP 159 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH--HHhcCCcccCC-CCcEEeecCC-CCCccCcCc
Confidence 677899999999999997 899999888766666666666632000 0000000 000 0000000000 011233332
Q ss_pred h-hhHHHHHHHHhhCC-------CEEEEECCCCCC-HHHHhhCCeeEEcc
Q 005866 570 P-EHKYEIVKRLQARK-------HICGMTGDGVND-APALKKADIGIAVA 610 (673)
Q Consensus 570 p-~~K~~iv~~l~~~g-------~~v~~iGDg~ND-~~al~~AdvGia~~ 610 (673)
| -=|..++..++..+ +.+.++|||.|| ||+++...--+||-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 2 12666666655432 378999999999 46666666666664
No 163
>PHA02597 30.2 hypothetical protein; Provisional
Probab=88.73 E-value=0.98 Score=43.54 Aligned_cols=99 Identities=13% Similarity=0.133 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.++++.|++.+ +.+++|.-+.......-+.+|+..-. +. .+ + ..+.++..+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f-----~--------------~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF-----S--------------EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc-----c--------------EEEEeccCcc
Confidence 46899999999999875 56667764444333344455553110 00 00 0 0011111111
Q ss_pred hHHHHH-HHHhhCC-CEEEEECCCCCCHHHHhhC--CeeE-Eccccc
Q 005866 572 HKYEIV-KRLQARK-HICGMTGDGVNDAPALKKA--DIGI-AVADAT 613 (673)
Q Consensus 572 ~K~~iv-~~l~~~g-~~v~~iGDg~ND~~al~~A--dvGi-a~~~~~ 613 (673)
|-+++ ..+++.| ..++|+||..+|+.+-++| ++-. .+..|.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 22222 2333333 4588999999999999999 9863 343443
No 164
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=87.14 E-value=0.5 Score=40.30 Aligned_cols=48 Identities=19% Similarity=0.270 Sum_probs=36.0
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 532 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia---~~~gi~ 532 (673)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667888899999999999999999999988765544544 456774
No 165
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=86.54 E-value=1.9 Score=42.49 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=70.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.||+.+.++.|++.|+.+.+.|+-....+..+...+|+.... ...+.+.+.. -....|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 578899999999999999999999999988899999999985321 1111111110 112334
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
+-=..-.+.|.-....++.+.|..|.+.|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 4434445555445668999999999999999999764
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=86.11 E-value=1.1 Score=44.44 Aligned_cols=89 Identities=21% Similarity=0.177 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
+.=|++.+.++.+++.|++|+.+||++.. .+..--++.|+... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~-----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS-----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS-----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc-----------------ccc
Confidence 44478999999999999999999998854 33333456676421 111111110000 000
Q ss_pred ChhhHHHHHHHHhhCCC-EEEEECCCCCCHHH
Q 005866 569 FPEHKYEIVKRLQARKH-ICGMTGDGVNDAPA 599 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~a 599 (673)
..+-|...-+.+++.|+ +++.+||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12347777788888865 67789999999774
No 167
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=84.96 E-value=5.6 Score=36.71 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=67.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHh-----CCCCCCCCCccccccccccccCCccHHHHhhh
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRL-----GMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
.|..++++.+..+.+++.|++++-+|++....+.. .-.+. +++.. .++... ..+-..+.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~sP--------~~l~~al~- 91 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLLSP--------DSLFSALH- 91 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEECC--------cchhhhhh-
Confidence 37999999999999999999999999999644433 33333 33211 111110 00000000
Q ss_pred cCEEEecChhhHHHHHHHHhhC-----CCEEEEECCCCCCHHHHhhCCee
Q 005866 562 ADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-++..+-.-+.|...++.++.. ....+..|...+|+.+-+++++-
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0234444457888888888764 34677889999999999887764
No 168
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=84.46 E-value=6.7 Score=47.64 Aligned_cols=201 Identities=15% Similarity=0.127 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-----CCe-eEE----EECCEEEEEeCCCCCCCcEEEEcCCCeeec
Q 005866 99 DFVGIITLLVINSTISFIEENNAGNAAAALMARL-----APK-GKV----LRDGRWNEQDASILVPGDIISIKLGDIIPA 168 (673)
Q Consensus 99 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~-~~V----~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPa 168 (673)
..+++++.++++.+.++.+++..++..+...... ..+ ..+ +.-|....+...+.+|.|.+.++ |+..-+
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~V 212 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLEI 212 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEEE
Confidence 3455666677888888888887776544332211 122 222 23588899999999999999995 445567
Q ss_pred eEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHHH
Q 005866 169 DARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (673)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (673)
|=-.|.|++.-++-. .|+..- --.|..+..|+...-=...+.=+..|.=... +......+.-...+.+..+.+.
T Consensus 213 dES~LTGES~pv~K~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~~ 286 (941)
T TIGR01517 213 DESSITGESDPIKKG--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLIG 286 (941)
T ss_pred EecccCCCCCccccc--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHHH
Confidence 777777776433322 132211 2457777777643221112222222211110 0000011121223344444444
Q ss_pred HHHHHH---HHHHHHHHHHHH---h---------hccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHH
Q 005866 249 NFCICS---IAVGMIVEIIVM---Y---------PIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (673)
Q Consensus 249 ~~~~~~---i~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~ 306 (673)
.+.+.. +++..++.++.. . ......+..++..+++.+.+++|.++++++..+....++
T Consensus 287 ~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak 359 (941)
T TIGR01517 287 KFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMK 359 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Confidence 332211 111111111110 0 011123445666777788889999999998888766553
No 169
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=83.13 E-value=3.3 Score=41.32 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=53.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-||+.++++.|++. +++.++|..+.. .+..|+.... + .++...+ +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f-d-~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF-E-FVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh-c-eeEeccc-------------------CCcCCCc
Confidence 4668999999999875 899999876543 1445653210 0 0110000 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCeeEEc
Q 005866 572 HK--YEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV 609 (673)
Q Consensus 572 ~K--~~iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvGia~ 609 (673)
-. ....+.+.-....++||||. ..|+.+-+.|++-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11 22333344344679999999 5999999999976543
No 170
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=82.86 E-value=5.1 Score=44.59 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe----
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG---- 567 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---- 567 (673)
+++++.+ .+++.|.+ +++|+-....+..+|++ +|++. +.|.+.+...+ -..-.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~-------VIgTeLev~~~----------G~~TG~i~g~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK-------VLGTELEVSKS----------GRATGFMKKP 169 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE-------EEecccEECcC----------CEEeeeecCC
Confidence 5666554 44567754 99999999999999987 89852 11211110000 001111
Q ss_pred --cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 568 --VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 568 --~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
+.-++|.+-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 23466877776432211223689999999999999999999984
No 171
>PLN02423 phosphomannomutase
Probab=82.48 E-value=1.9 Score=43.34 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=34.7
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CCCCHHHHhh-CCeeEEccc
Q 005866 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKK-ADIGIAVAD 611 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~al~~-AdvGia~~~ 611 (673)
.+|..-++.|+ ....|+++|| |.||.+||+. .=.|+.+.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 67999999999 6778999999 8999999997 667888854
No 172
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=81.67 E-value=0.93 Score=42.35 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=38.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
+.=..||++.+.++.|.+. +++++.|-.....|..+...++..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 3345899999999999987 999999999999999999998864
No 173
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=81.16 E-value=5.3 Score=39.25 Aligned_cols=121 Identities=13% Similarity=0.195 Sum_probs=70.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-+++.++++.++.. +++.++|--.........+++|+... ++.....+ -+....|.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~--------------------~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE--------------------DVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec--------------------ccccCCCC
Confidence 5567888999999888 89999998677777888888996432 11111110 11223343
Q ss_pred hH--HHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCe-eEEcc-cccH--HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HK--YEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVA-DATD--AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K--~~iv~~l~~~g~~v~~iGDg~-ND~~al~~Adv-Gia~~-~~~~--~a~~aad~vl~~~~~~~i~~~i 636 (673)
.+ ....+.+.-....++||||.. ||+..-+.++. +|-+. .+.. ......+..+. ++..+..++
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~--~l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEIS--SLAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEc--CHHHHHHHH
Confidence 33 233333333355799999985 78565566665 34443 2211 11144555553 366555554
No 174
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=80.10 E-value=3.1 Score=42.45 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.6
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 005866 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (673)
Q Consensus 493 lr-~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~ 533 (673)
+| |++.+++++|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 66 999999999999999999999988888888999999964
No 175
>PRK10444 UMP phosphatase; Provisional
Probab=79.51 E-value=2.1 Score=43.11 Aligned_cols=47 Identities=21% Similarity=0.346 Sum_probs=40.4
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH---hCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR---LGM 531 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~---~gi 531 (673)
|.+.-.+.+-|++.++++.|++.|++++++|+....+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 66666778889999999999999999999999998877777766 466
No 176
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=79.34 E-value=8.8 Score=38.78 Aligned_cols=90 Identities=21% Similarity=0.223 Sum_probs=51.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia---~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
+.|.=|++.+..+.+++.|++|+.+||+....-.... ++.|+... ....+.+.. +. ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~--~~LiLR~~~-D~----------------~~ 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW--EKLILKDPQ-DN----------------SA 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc--ceeeecCCC-CC----------------cc
Confidence 4566679999999999999999999999864322222 34576421 111111100 00 00
Q ss_pred ecChhhHHHHHHHHhhCCC-EEEEECCCCCCHH
Q 005866 567 GVFPEHKYEIVKRLQARKH-ICGMTGDGVNDAP 598 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~ 598 (673)
....+-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 204 ~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 204 ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLK 236 (275)
T ss_pred chhHHHHHHHHHHHHHcCceEEEEECCCHHhcc
Confidence 0011334444444455665 6778999999963
No 177
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=78.09 E-value=2.8 Score=42.39 Aligned_cols=48 Identities=25% Similarity=0.337 Sum_probs=36.6
Q ss_pred EEecccCC----CCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCC
Q 005866 485 GLMPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMG 532 (673)
Q Consensus 485 G~i~~~D~----lr~~~~~~I~~l~~~gi~v~m~TGD~~~~---a~~ia~~~gi~ 532 (673)
|.+.-.+. +=|++.++|+.|+++|++++++||.+..+ .....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555565 78899999999999999999999987654 33334556764
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=77.91 E-value=4.7 Score=40.81 Aligned_cols=118 Identities=16% Similarity=0.182 Sum_probs=65.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhh-----hcCEEEecC
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE-----KADGFAGVF 569 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~ 569 (673)
++..++++.|++.+.++.+.|+.............|+. .+-..+. ...++....
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999886643222111111110 0000000 001223333
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee-EEccccc---H---HHHhhcCEEEcCCChhHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVADAT---D---AARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG-ia~~~~~---~---~a~~aad~vl~~~~~~~i~~~ 635 (673)
|+-=..+.+.+......++||||.. +|..+-+.+++- +.+..|. + .....+|.++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3333344455544457899999996 999999999865 3443331 1 1123467777 447666654
No 179
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=76.94 E-value=4.4 Score=41.39 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.3
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 005866 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (673)
Q Consensus 493 lr-~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~ 533 (673)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999777777888899999963
No 180
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=76.82 E-value=3.5 Score=38.72 Aligned_cols=86 Identities=14% Similarity=0.040 Sum_probs=52.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.++++ ++.++|.-+........+.+|+.... ..++.+.+.. .....|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTVR-----------------AYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhcC-----------------CCCCCHH
Confidence 57889999998 36789988888777788888874211 0111111000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhC
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~A 603 (673)
-=....+.+.-....++||||+..|+.+-+++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 11344455554456799999999998876653
No 181
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=75.98 E-value=6.7 Score=43.90 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=31.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCh------------HHHHHHHHHhCCC
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 532 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~------------~~a~~ia~~~gi~ 532 (673)
+-|+++++++.|++.|++++++|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999996443 2456667777764
No 182
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=75.19 E-value=5.2 Score=40.24 Aligned_cols=49 Identities=8% Similarity=-0.023 Sum_probs=38.9
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMGT 533 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TG---D~~~~a~~ia~~~gi~~ 533 (673)
|.+.-.+.+=|++.++|+.|++.|++++++|| ..........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44555566678999999999999999999996 56677777777788753
No 183
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=74.87 E-value=7.1 Score=36.32 Aligned_cols=89 Identities=25% Similarity=0.327 Sum_probs=58.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
+++=+++.|..-++.|=.++.+||+.+ .++..+|+...|... .. ..|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~p------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NP------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cc------------------------eeeccC
Confidence 455678889988999999999999986 355666666666321 11 123332
Q ss_pred Ch--hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEc
Q 005866 569 FP--EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV 609 (673)
Q Consensus 569 ~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~ 609 (673)
.| .| ..-...+|+++ .-..-||+.||+.|-+.|++ ||-+
T Consensus 169 k~k~~q-y~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQ-YTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCccc-ccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 22 21 22244566665 44578999999999999985 5544
No 184
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=73.88 E-value=10 Score=35.89 Aligned_cols=24 Identities=8% Similarity=0.068 Sum_probs=22.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcC
Q 005866 493 PRHDSAETIRRALNLGVNVKMITG 516 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TG 516 (673)
+.+++.+++..|+++|++++|+|-
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC
Confidence 568999999999999999999994
No 185
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=72.93 E-value=19 Score=37.95 Aligned_cols=106 Identities=15% Similarity=0.149 Sum_probs=64.6
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh-C-------CCCCCCCCcccccccccc----------------c
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G-------MGTNMYPSSALLGQDKDE----------------S 549 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~-g-------i~~~~~~~~~~~~~~~~~----------------~ 549 (673)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ | +.. .+ ..++.+..... .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~-yF-D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD-YF-DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh-hC-cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 569999999999999999999999999999988886 6 211 11 11222111110 0
Q ss_pred cCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCC-CCHHHHh-hCCe
Q 005866 550 IAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGV-NDAPALK-KADI 605 (673)
Q Consensus 550 ~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~-~Adv 605 (673)
........ +++-.||+.=+-. .+.+.+...+..|+++||.. .|+-.-+ .++.
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 00000011 2223355443332 34556667788999999986 6877665 5553
No 186
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=72.18 E-value=20 Score=35.77 Aligned_cols=134 Identities=16% Similarity=0.144 Sum_probs=66.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe--c
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--V 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~ 568 (673)
-.+|+++.+.++.|++.+|.+.+.|+-=......+-++-|...+. ..+...-..-..+ ..+ .-|.. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~-g~l-------~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDED-GVL-------VGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TT-SBE-------EEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCc-ceE-------eecCCCce
Confidence 468999999999999999999999987777777777776654321 1111110000000 000 00000 0
Q ss_pred ChhhHHH-------HHHHHhhCCCEEEEECCCCCCHHHHhhC---CeeEEcc--ccc-H----HHHhhcCEEEcCCChhH
Q 005866 569 FPEHKYE-------IVKRLQARKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-D----AARSASDIVLTEPGLSV 631 (673)
Q Consensus 569 ~p~~K~~-------iv~~l~~~g~~v~~iGDg~ND~~al~~A---dvGia~~--~~~-~----~a~~aad~vl~~~~~~~ 631 (673)
-+-.|-. .-+.++. ...|+..||..-|+.|-.-. +.-+.+| +.. + .=+++=|+|+.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0111211 1122333 34788999999999997655 4444455 432 2 23456799999886444
Q ss_pred HHHHH
Q 005866 632 IISAV 636 (673)
Q Consensus 632 i~~~i 636 (673)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 187
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=71.79 E-value=80 Score=37.43 Aligned_cols=157 Identities=15% Similarity=0.098 Sum_probs=82.9
Q ss_pred ECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEec
Q 005866 140 RDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATG 219 (673)
Q Consensus 140 r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG 219 (673)
.-|....+...+.+|-|-+.++ |+..-+|=-.+.|++.-|+-. +|. .--.|..+-+|+-..-=...+.=+..|
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~LTGES~PV~K~--~~~----~v~aGT~v~~G~~~~~V~~tG~~T~~g 183 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAALTGESLPVTKK--TGD----IAYSGSTVKQGEAEAVVTATGMNTFFG 183 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEe-cCceEEEcccccCCccceEec--cCC----eeeccCEEEccEEEEEEEEcCCccHHH
Confidence 3578899999999999999885 444556766666766444432 222 123567777776433212222222222
Q ss_pred ccccccchhhhh-cccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHH
Q 005866 220 VHTFFGKAAHLV-DTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLS 298 (673)
Q Consensus 220 ~~T~~g~i~~~~-~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~ 298 (673)
.=... +.+.. ..+.-.....+....+..+.+...++.+++.++.........+..++..++..+.++.|.++++++.
T Consensus 184 ~i~~l--v~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la 261 (755)
T TIGR01647 184 KAAAL--VQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMA 261 (755)
T ss_pred HHHHH--hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHH
Confidence 21110 00011 1111122344555555544333333333333321111112234456777888899999999999998
Q ss_pred HHHHHHH
Q 005866 299 VTMAIGS 305 (673)
Q Consensus 299 ~~~~~~~ 305 (673)
++....+
T Consensus 262 ~g~~r~a 268 (755)
T TIGR01647 262 VGAAELA 268 (755)
T ss_pred HHHHHHH
Confidence 8876654
No 188
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=70.79 E-value=5.1 Score=35.61 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHH
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~ 521 (673)
+++.+++.++++.+++.|+.++++||++...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6688999999999999999999999998654
No 189
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=68.92 E-value=1.1e+02 Score=37.25 Aligned_cols=202 Identities=15% Similarity=0.116 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC------eeEE----EECCEEEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 005866 102 GIITLLVINSTISFIEENNAGNAAAALMARLAP------KGKV----LRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (673)
Q Consensus 102 ~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~V----~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ 171 (673)
.++++..+.....-++..++.++++++...... ...+ +.-|..+.+...|.+|-|..+|+..+ .-+|=-
T Consensus 111 ~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs 189 (917)
T COG0474 111 LVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDES 189 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEcc
Confidence 344444444567777777777776666554332 2222 23588899999999999999999887 566766
Q ss_pred EEecCCeeEecccc--cCCCCccc---C---CCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHH
Q 005866 172 LLEGDPLKIDQSAL--TGESLPVT---K---GPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKV 243 (673)
Q Consensus 172 ll~g~~l~Vdes~L--TGEs~pv~---k---~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~ 243 (673)
.|.|++.-|+-... ++|..|.. + -.|..+.+|+-..--...|.-+..|..+..-...+... ..-...+.+.
T Consensus 190 ~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~-t~l~~~l~~~ 268 (917)
T COG0474 190 ALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVK-TPLQRKLNKL 268 (917)
T ss_pred cccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccC-CcHHHHHHHH
Confidence 77777644433222 22344443 3 35788888874332233444555555544322221111 1112234555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHH
Q 005866 244 LTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (673)
Q Consensus 244 ~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 305 (673)
...+..+.+...++.+++..+.........+..++.-++++..-+.|..+-+++.++...-+
T Consensus 269 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 269 GKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 55555554443333333333321110112344566667777778888877777777665544
No 190
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=68.55 E-value=26 Score=39.70 Aligned_cols=104 Identities=10% Similarity=0.110 Sum_probs=73.8
Q ss_pred cchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC----
Q 005866 58 KESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLA---- 133 (673)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 133 (673)
-|..+...|++|.|.+++++.+..++..+....... +|..+++++++.++...++.++++++.+....-+-...
T Consensus 95 ~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~t--y~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~~ltr~~ 172 (1051)
T KOG0210|consen 95 VPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLST--YWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYTKLTRDG 172 (1051)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhh--hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhheeeccCC
Confidence 456666677888888888888877776543222111 67788999999999999999999998776543322211
Q ss_pred ---CeeEEEECCEEEEEeCCCCCCCcEEEEcCC
Q 005866 134 ---PKGKVLRDGRWNEQDASILVPGDIISIKLG 163 (673)
Q Consensus 134 ---~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G 163 (673)
.+..-+.=|....+.-.+=+|-|.|.++.-
T Consensus 173 ~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTs 205 (1051)
T KOG0210|consen 173 TRREPSSDIKVGDVIIVHKDERVPADMILLRTS 205 (1051)
T ss_pred cccccccccccccEEEEecCCcCCcceEEEEcc
Confidence 112234457778888899999999999764
No 191
>PTZ00174 phosphomannomutase; Provisional
Probab=67.21 E-value=8.4 Score=38.65 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=30.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 526 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia 526 (673)
++.+.+.++|+++++.|++++++||++........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 48889999999999999999999999987554433
No 192
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=65.88 E-value=8 Score=43.35 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=89.1
Q ss_pred ECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCe---------
Q 005866 140 RDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGE--------- 210 (673)
Q Consensus 140 r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~--------- 210 (673)
+-|....+...+.+|-|.+.++- ..-+|--.+.|++.-+.-. .|+. ...|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 35888999999999999999966 5667777778877434432 2443 24788999999765322
Q ss_pred EEEEEEEecccccccchhhhhcccCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHhh--ccCCcchhhHHHHHHHHHh
Q 005866 211 IEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVL-TAIGNFCICSIAVGMIVEIIVMYP--IQDREYRPGIDNLLVLLIG 287 (673)
Q Consensus 211 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~ 287 (673)
..+.++++|.+++. .-.....+.. ..+..+.+...++.++.+++..+. .+...+..++..++..+.+
T Consensus 125 ~i~~~v~~~~~~k~----------~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETKT----------PLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCCC----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 23344566666521 1112223333 344433333222222222222221 0223455677778888999
Q ss_pred hcCCcchHHHHHHHHHHHH
Q 005866 288 GIPIAMPTVLSVTMAIGSH 306 (673)
Q Consensus 288 ~iP~~l~~~~~~~~~~~~~ 306 (673)
++|.++|+++..+.....+
T Consensus 195 aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLAK 213 (499)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 9999999999888776553
No 193
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=65.38 E-value=1.6e+02 Score=35.46 Aligned_cols=197 Identities=14% Similarity=0.073 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC------------eeEE----EECCEEEEEeCCCCCCCcEEEEcCCCe
Q 005866 102 GIITLLVINSTISFIEENNAGNAAAALMARLAP------------KGKV----LRDGRWNEQDASILVPGDIISIKLGDI 165 (673)
Q Consensus 102 ~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~V----~r~g~~~~i~~~~Lv~GDiI~l~~G~~ 165 (673)
.+++..+++.+.++-.+ ++.++++++...... ...| +.-|....+...+.+|-|.+.++ |.-
T Consensus 97 iv~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g~~ 174 (867)
T TIGR01524 97 MVLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-ARD 174 (867)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-cCc
Confidence 44444555556665554 555566655433221 1222 23478899999999999999886 545
Q ss_pred eeceEEEEecCCeeEeccccc--CCCCcc-----cCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcc-cCCC
Q 005866 166 IPADARLLEGDPLKIDQSALT--GESLPV-----TKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDT-TNQV 237 (673)
Q Consensus 166 vPaD~~ll~g~~l~Vdes~LT--GEs~pv-----~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~-~~~~ 237 (673)
+-+|=-.+.|++.-|+-..-+ .+..|. .--.|..+.+|.....=...+.=+..|.=.. .+.. .+. ..-.
T Consensus 175 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~-~~~~t~lq 251 (867)
T TIGR01524 175 LFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI--AATE-RRGQTAFD 251 (867)
T ss_pred eEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH--HhhC-CCCCCcHH
Confidence 667877777876444333211 011111 1247888888875432222222233332111 1111 111 1111
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHH
Q 005866 238 GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304 (673)
Q Consensus 238 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~ 304 (673)
..+.+....+..+.+....+.+++..+.... ....+..++..++..+.++.|.++++++..+....
T Consensus 252 ~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m 317 (867)
T TIGR01524 252 KGVKSVSKLLIRFMLVMVPVVLMINGLMKGD-WLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM 317 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHheehHHHhcCC-HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 2334444444443332222222222221111 11234445666788888899999999988876543
No 194
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=62.46 E-value=1.5e+02 Score=36.09 Aligned_cols=158 Identities=12% Similarity=0.009 Sum_probs=82.4
Q ss_pred CCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccc------------cCCCCcc-----cCCCCCeeeec
Q 005866 141 DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSAL------------TGESLPV-----TKGPGDGVYSG 203 (673)
Q Consensus 141 ~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~L------------TGEs~pv-----~k~~~~~v~aG 203 (673)
-|....+...+.+|-|.+.++. .-+-+|=-.+.|++.-|+-... .++..+. .--.|..+.+|
T Consensus 174 ~GDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G 252 (903)
T PRK15122 174 PGDIVHLSAGDMIPADVRLIES-RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSG 252 (903)
T ss_pred CCCEEEECCCCEEeeeEEEEEc-CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEee
Confidence 5788999999999999998874 3456676677777644544432 1222111 23568888888
Q ss_pred ceeeeCeEEEEEEEecccccccchhh-hhccc--CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHH
Q 005866 204 STCKQGEIEAVVIATGVHTFFGKAAH-LVDTT--NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280 (673)
Q Consensus 204 t~v~~g~~~~~V~~tG~~T~~g~i~~-~~~~~--~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (673)
+...-=...+.=+..|.=... +.. ..+.+ .+...+.+.+..++.++.+++++.. .+... .....+..++..
T Consensus 253 ~~~~~V~atG~~T~~gkI~~~--v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~~~-~~~~~l~~aisl 326 (903)
T PRK15122 253 TATAVVVATGSRTYFGSLAKS--IVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFTKG-DWLEALLFALAV 326 (903)
T ss_pred eEEEEEEEeccccHhhHHHHH--hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhccC-CHHHHHHHHHHH
Confidence 754322222222222221111 001 01111 1123345555555443332222111 11111 111233445667
Q ss_pred HHHHHHhhcCCcchHHHHHHHHHHH
Q 005866 281 LLVLLIGGIPIAMPTVLSVTMAIGS 305 (673)
Q Consensus 281 ~~~ll~~~iP~~l~~~~~~~~~~~~ 305 (673)
++....++.|..+++++..+....+
T Consensus 327 ~V~~~Pe~Lp~~vt~~La~g~~~ma 351 (903)
T PRK15122 327 AVGLTPEMLPMIVSSNLAKGAIAMA 351 (903)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHH
Confidence 7888888999999998888765544
No 195
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=61.62 E-value=2.3e+02 Score=34.41 Aligned_cols=159 Identities=14% Similarity=0.058 Sum_probs=81.2
Q ss_pred CCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEeccccc---CCCCcc----cCCCCCeeeecceeeeCeEEE
Q 005866 141 DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT---GESLPV----TKGPGDGVYSGSTCKQGEIEA 213 (673)
Q Consensus 141 ~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LT---GEs~pv----~k~~~~~v~aGt~v~~g~~~~ 213 (673)
-|....+...+.+|-|.+.++ |+-+-+|=-.+.|++.-|+-..-+ .+..+. .--.|..+.+|+...-=...+
T Consensus 185 pGDiV~l~~Gd~IPaDg~li~-g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG 263 (902)
T PRK10517 185 PGDIIKLAAGDMIPADLRILQ-ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATG 263 (902)
T ss_pred CCCEEEECCCCEEeeeEEEEE-cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEec
Confidence 578899999999999999886 445667777777776544443221 111111 124788888887543222223
Q ss_pred EEEEecccccccchhhhhcc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCc
Q 005866 214 VVIATGVHTFFGKAAHLVDT-TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIA 292 (673)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~ 292 (673)
.=+..|.=.. .+.+.-.. +.-.....+....+..+.+....+.+++..+.... ....+..++..++.....+.|..
T Consensus 264 ~~T~~GkI~~--~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~-~~~~l~~alsv~V~~~Pe~LP~~ 340 (902)
T PRK10517 264 ANTWFGQLAG--RVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGD-WWEAALFALSVAVGLTPEMLPMI 340 (902)
T ss_pred cccHHHHHHH--HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCC-HHHHHHHHHHHHHHHcccHHHHH
Confidence 3333332111 11111111 11112334444444433322222222222211111 11223445666777888889999
Q ss_pred chHHHHHHHHH
Q 005866 293 MPTVLSVTMAI 303 (673)
Q Consensus 293 l~~~~~~~~~~ 303 (673)
+++++..+...
T Consensus 341 vt~~la~g~~~ 351 (902)
T PRK10517 341 VTSTLARGAVK 351 (902)
T ss_pred HHHHHHHHHHH
Confidence 88888887544
No 196
>PTZ00445 p36-lilke protein; Provisional
Probab=60.84 E-value=17 Score=35.29 Aligned_cols=62 Identities=13% Similarity=0.234 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEE-----E-------ecccCCCCcchHHHHHHHHhCCCeE
Q 005866 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMG-----L-------MPLFDPPRHDSAETIRRALNLGVNV 511 (673)
Q Consensus 444 ~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG-----~-------i~~~D~lr~~~~~~I~~l~~~gi~v 511 (673)
.+..+...+.+.+.|.|++++=+.. ++++ . ..+--.++|+.+.-+++|+++||++
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3445556677899999999886544 3332 1 1112237999999999999999999
Q ss_pred EEEcCCC
Q 005866 512 KMITGDQ 518 (673)
Q Consensus 512 ~m~TGD~ 518 (673)
.++|=-.
T Consensus 95 ~VVTfSd 101 (219)
T PTZ00445 95 SVVTFSD 101 (219)
T ss_pred EEEEccc
Confidence 9999544
No 197
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=58.57 E-value=12 Score=37.92 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=38.8
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 005866 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (673)
Q Consensus 483 ~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~ 529 (673)
+=|++.-.+.+=|++.++|+.|+++|++++.+|-....+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34778888889999999999999999999999988876666555443
No 198
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=57.72 E-value=11 Score=38.47 Aligned_cols=48 Identities=21% Similarity=0.228 Sum_probs=35.4
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHhCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRLGMG 532 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~---ia~~~gi~ 532 (673)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+... --+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4555567777899999999999999999999976443333 23456764
No 199
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=57.64 E-value=4.6e+02 Score=32.54 Aligned_cols=75 Identities=13% Similarity=0.203 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe---cCCee
Q 005866 103 IITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE---GDPLK 179 (673)
Q Consensus 103 ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~---g~~l~ 179 (673)
-++++++..+...+.-+..+++.++|+ .+.. ......+ ++-|....+...|.+|=|.++++ |..+-
T Consensus 196 ~~~i~~i~~~~~~~~~~~~~k~~~~L~-~~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iP 264 (1054)
T TIGR01657 196 SLCIVFMSSTSISLSVYQIRKQMQRLR-DMVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMP 264 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEec
Confidence 344555555556666677777665542 3211 1122222 34588899999999999999997 55555
Q ss_pred EecccccCC
Q 005866 180 IDQSALTGE 188 (673)
Q Consensus 180 Vdes~LTGE 188 (673)
+|=-.+.|+
T Consensus 265 aD~~ll~g~ 273 (1054)
T TIGR01657 265 CDSVLLSGS 273 (1054)
T ss_pred ceEEEEeCc
Confidence 666666663
No 200
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=57.07 E-value=2.7e+02 Score=33.82 Aligned_cols=200 Identities=13% Similarity=0.057 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC-----CeeEEE-----ECCEEEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 005866 102 GIITLLVINSTISFIEENNAGNAAAALMARLA-----PKGKVL-----RDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (673)
Q Consensus 102 ~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~V~-----r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ 171 (673)
.+++.++++.+-++ ...+.-+++.++..... .+...+ .-|....+...|.+|-|.+.++.. ..-+|=-
T Consensus 89 ~i~~~~~i~~~qe~-~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES 166 (884)
T TIGR01522 89 AILIVVTVGFVQEY-RSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV-DLSIDES 166 (884)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC-ceEEEcc
Confidence 34444444444444 44555556665533221 222222 247889999999999999999743 3446777
Q ss_pred EEecCCeeEecccc--cCCC---Ccc---cCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhc-ccCCCCcHHH
Q 005866 172 LLEGDPLKIDQSAL--TGES---LPV---TKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-TTNQVGHFQK 242 (673)
Q Consensus 172 ll~g~~l~Vdes~L--TGEs---~pv---~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~-~~~~~~~~~~ 242 (673)
.+.|++.-|.-..- .++. ..- .--.|..+.+|+-..-=...+.=+..|.=... +.+... .+.-...+.+
T Consensus 167 ~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~~~~~kt~lq~~l~~ 244 (884)
T TIGR01522 167 NLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM--MQAIEKPKTPLQKSMDL 244 (884)
T ss_pred cccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH--hccCCCCCCcHHHHHHH
Confidence 77777643433221 1110 111 12467888887643321222222333321110 111111 1222233455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHH
Q 005866 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (673)
Q Consensus 243 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~ 306 (673)
....+....+..+++.+++.++.... ....+..++..+++.+.++.|.++++++..+....++
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak 307 (884)
T TIGR01522 245 LGKQLSLVSFGVIGVICLVGWFQGKD-WLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSK 307 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhh
Confidence 55555544332222223333322111 1122344566677788899999999998888766543
No 201
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=55.58 E-value=3.3e+02 Score=33.53 Aligned_cols=200 Identities=12% Similarity=0.029 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-----CCe-eEE----EECCEEEEEeCCCCCCCcEEEEcCCCeeeceE
Q 005866 101 VGIITLLVINSTISFIEENNAGNAAAALMARL-----APK-GKV----LRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (673)
Q Consensus 101 ~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~-~~V----~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~ 170 (673)
+.++++..+.....-.+.+++-+++.++.... ..+ ..+ +.-|....+...+.+|.|.+.++.. .+-+|=
T Consensus 111 ~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~-~l~Vde 189 (997)
T TIGR01106 111 SAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQ-GCKVDN 189 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEcc-CcEEEc
Confidence 34444444445555556666655555542221 111 222 2358889999999999999999765 355676
Q ss_pred EEEecCCeeEecccccCCCCccc----CCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhc-ccCCCCcHHHHHH
Q 005866 171 RLLEGDPLKIDQSALTGESLPVT----KGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-TTNQVGHFQKVLT 245 (673)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~----k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~-~~~~~~~~~~~~~ 245 (673)
-.|.|++.-|.-..-..+..|.. --.|..+.+|+...-=...+.=+..|.-...-+ +.-. ...-...+++..+
T Consensus 190 S~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~--~~~~~~~pl~~~~~~~~~ 267 (997)
T TIGR01106 190 SSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLAS--GLENGKTPIAIEIEHFIH 267 (997)
T ss_pred cccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhh--hcccCCCcHHHHHHHHHH
Confidence 66777764343322110111221 125777778863222112233333343222100 1111 1221234556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHH
Q 005866 246 AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304 (673)
Q Consensus 246 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~ 304 (673)
.+..+.++..++.+++..+..+.+ ...+..++..+++.+..++|..+++++..+....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m 325 (997)
T TIGR01106 268 IITGVAVFLGVSFFILSLILGYTW-LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM 325 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH
Confidence 666554333333323322222211 1233445566666788899999998888776543
No 202
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=53.77 E-value=67 Score=32.56 Aligned_cols=90 Identities=11% Similarity=0.119 Sum_probs=49.4
Q ss_pred cCCCCcchHHHHHHHHhCCCe-EEEEcCCC-hHHHHHHHHHhC-CCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 490 FDPPRHDSAETIRRALNLGVN-VKMITGDQ-LAIGKETGRRLG-MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~-v~m~TGD~-~~~a~~ia~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
-|-+=++..+.++.+++.|+. +.++|=.. .+....+++... ..- .....-++|..
T Consensus 126 pDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY-~vS~~GvTG~~--------------------- 183 (263)
T CHL00200 126 PDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIY-LVSTTGVTGLK--------------------- 183 (263)
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEE-EEcCCCCCCCC---------------------
Confidence 344446777888888888886 55665554 345555665543 210 00011112211
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHh
Q 005866 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~ 601 (673)
...|++-.++++.+++.-..-.++|=|+|+....+
T Consensus 184 ~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~ 218 (263)
T CHL00200 184 TELDKKLKKLIETIKKMTNKPIILGFGISTSEQIK 218 (263)
T ss_pred ccccHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 01144456677777776555567899999655443
No 203
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=53.04 E-value=48 Score=32.94 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=23.8
Q ss_pred HHhhccccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCC
Q 005866 9 EAVLKETVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGY 51 (673)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~ 51 (673)
...+.|.+...+.|-+|..+-..-. ++|++.+++++--+..-+
T Consensus 83 ~~~~re~~~i~~~p~~e~~el~~iy~~~G~~~~~a~~~~~~l~~ 126 (234)
T cd02433 83 ASIPDERRELRKHPLEEAAELALIYRAKGLDEEEAKRVASQLMN 126 (234)
T ss_pred HHHHHHHHHhhhCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 3444455555566644444433333 579999887765444443
No 204
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=52.87 E-value=15 Score=29.11 Aligned_cols=52 Identities=31% Similarity=0.389 Sum_probs=34.1
Q ss_pred HHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCee-EEcccc---cHHH---HhhcCEEEc
Q 005866 574 YEIVKRLQARKHICGMTGDG-VNDAPALKKADIG-IAVADA---TDAA---RSASDIVLT 625 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvG-ia~~~~---~~~a---~~aad~vl~ 625 (673)
..+.+.+......++||||. ..|+.+-+++++- |.+..| .+.. ...+|+|+.
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 34445554444579999999 9999999999965 344322 2222 257888873
No 205
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=52.21 E-value=13 Score=37.14 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=49.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhh---h-cCEEEecC
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE---K-ADGFAGVF 569 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~v~~~~~ 569 (673)
-++..++++.|++.|++. ++|......+.......|.. .+...++ . ...+....
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 478889999998899997 66776543332221111111 0111110 0 00122222
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCC-CCCHHHHhhCCeeE
Q 005866 570 PEHKYEIVKRLQAR-KHICGMTGDG-VNDAPALKKADIGI 607 (673)
Q Consensus 570 p~~K~~iv~~l~~~-g~~v~~iGDg-~ND~~al~~AdvGi 607 (673)
|+-=..+.+.+... ...++|+||. .+|..+=+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 32223344444322 3479999999 59999998888653
No 206
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=49.73 E-value=30 Score=32.50 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc-CCChHHHHHHHHHhCCC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 532 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~T-GD~~~~a~~ia~~~gi~ 532 (673)
.+-|+++++++.|++.|+++.++| -+.+..|+++-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 366899999999999999999999 47889999999999986
No 207
>PRK11507 ribosome-associated protein; Provisional
Probab=49.11 E-value=23 Score=27.76 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=23.5
Q ss_pred eEEEECCEEEEEeCCCCCCCcEEEEcC
Q 005866 136 GKVLRDGRWNEQDASILVPGDIISIKL 162 (673)
Q Consensus 136 ~~V~r~g~~~~i~~~~Lv~GDiI~l~~ 162 (673)
-.|..||+...-.-+.|.|||+|.+..
T Consensus 37 g~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 37 GQVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred CceEECCEEecccCCCCCCCCEEEECC
Confidence 367789999999999999999999854
No 208
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=48.75 E-value=11 Score=30.74 Aligned_cols=22 Identities=27% Similarity=0.498 Sum_probs=16.5
Q ss_pred EeCCCCCCCcEEEE-cCCCeeec
Q 005866 147 QDASILVPGDIISI-KLGDIIPA 168 (673)
Q Consensus 147 i~~~~Lv~GDiI~l-~~G~~vPa 168 (673)
+...+|.+||.|.+ ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 34578999999998 67999995
No 209
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=48.72 E-value=33 Score=31.74 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=37.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
.=.+||++.+.++.|++. +++.+.|.-....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345899999999999855 999999999999999999999875
No 210
>PLN02591 tryptophan synthase
Probab=48.42 E-value=1.1e+02 Score=30.81 Aligned_cols=87 Identities=14% Similarity=0.134 Sum_probs=49.1
Q ss_pred CcchHHHHHHHHhCCCe-EEEEcCCCh-HHHHHHHHHh-CCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 494 RHDSAETIRRALNLGVN-VKMITGDQL-AIGKETGRRL-GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~-v~m~TGD~~-~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
=++..+..+.+++.|+. +.++|-... +..+.+++.. |.. -.+...-++|.. .-.|
T Consensus 117 ~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFI-Y~Vs~~GvTG~~---------------------~~~~ 174 (250)
T PLN02591 117 LEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFV-YLVSSTGVTGAR---------------------ASVS 174 (250)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcE-EEeeCCCCcCCC---------------------cCCc
Confidence 37788888888888887 455555553 4456666553 221 000000111110 0115
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCC---CHHHHhh
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVN---DAPALKK 602 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~N---D~~al~~ 602 (673)
.+-.+.++.+++....-+++|-|++ |+..+..
T Consensus 175 ~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 175 GRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred hhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 5556778888876666778899999 4444433
No 211
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=45.95 E-value=1.6e+02 Score=25.25 Aligned_cols=24 Identities=13% Similarity=0.218 Sum_probs=10.9
Q ss_pred HHHHhHHHHHHHHHHhcCCeeEEE
Q 005866 116 IEENNAGNAAAALMARLAPKGKVL 139 (673)
Q Consensus 116 ~~~~~~~~~~~~l~~~~~~~~~V~ 139 (673)
.-.+++++..+++.+.+.+--+|+
T Consensus 37 RpqkK~~k~~~~~~~~Lk~Gd~Vv 60 (106)
T PRK05585 37 RPQQKRQKEHKKMLSSLAKGDEVV 60 (106)
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEE
Confidence 334444444555554444433443
No 212
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=45.80 E-value=11 Score=35.72 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.7
Q ss_pred EEecccCccccCce
Q 005866 330 LCSDKTGTLTLNKL 343 (673)
Q Consensus 330 i~~DKTGTLT~~~m 343 (673)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999984
No 213
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=45.37 E-value=13 Score=28.70 Aligned_cols=27 Identities=30% Similarity=0.546 Sum_probs=15.1
Q ss_pred EEEECCEEEEEeCCCCCCCcEEEEcCCC
Q 005866 137 KVLRDGRWNEQDASILVPGDIISIKLGD 164 (673)
Q Consensus 137 ~V~r~g~~~~i~~~~Lv~GDiI~l~~G~ 164 (673)
.|..||+...-.-..|.|||+|.+ .|.
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HHEETTB----SS----SSEEEEE-TTE
T ss_pred ceEECCEEccccCCcCCCCCEEEE-CCE
Confidence 366789988889999999999999 443
No 214
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=44.52 E-value=25 Score=30.72 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=29.6
Q ss_pred CCcchHHHHHHHHhCCCe-EEEEcCCChHHHHHHHHHhCC
Q 005866 493 PRHDSAETIRRALNLGVN-VKMITGDQLAIGKETGRRLGM 531 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~-v~m~TGD~~~~a~~ia~~~gi 531 (673)
+.+.+.+.++++.+.|++ +|+.+|.....+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 345778999999999997 899999988999999999887
No 215
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=43.95 E-value=1.9e+02 Score=28.16 Aligned_cols=62 Identities=15% Similarity=0.130 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecC
Q 005866 106 LLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGD 176 (673)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~ 176 (673)
++++..+..+++.+...+..+.+++....... +...+ ++-|....+...|.+|=|.+.+...
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g 63 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKVTV----IRDGRWQKIPSSELVPGDIIILKAG 63 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEEEE----EETTEEEEEEGGGT-TTSEEEEETT
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccEEE----EeccccccchHhhccceeeeecccc
Confidence 44555666667667777777776655433221 21222 3337888888888888888888643
No 216
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=43.26 E-value=60 Score=27.40 Aligned_cols=32 Identities=25% Similarity=0.473 Sum_probs=25.8
Q ss_pred CeeEEEECCEEEEEeCCCCCCCcEEEEcCCCee
Q 005866 134 PKGKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (673)
Q Consensus 134 ~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~v 166 (673)
..-+|.-||+.. -|+.++++||+|.|.-|...
T Consensus 32 ~~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 32 EGGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HCCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 344677788876 79999999999999988654
No 217
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=43.23 E-value=88 Score=32.71 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=38.6
Q ss_pred EEEecccCCCCcchHHHHHHHHhC----CCeEEEEcCCC---hH-HHHHHHHHhCCC
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---LA-IGKETGRRLGMG 532 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~----gi~v~m~TGD~---~~-~a~~ia~~~gi~ 532 (673)
=|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 477777889999999999999998 99999999554 33 355556778874
No 218
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=42.76 E-value=61 Score=25.29 Aligned_cols=33 Identities=18% Similarity=0.092 Sum_probs=24.4
Q ss_pred CCeeEEEECCEEEEEe---CCCCCCCcEEEEcCCCe
Q 005866 133 APKGKVLRDGRWNEQD---ASILVPGDIISIKLGDI 165 (673)
Q Consensus 133 ~~~~~V~r~g~~~~i~---~~~Lv~GDiI~l~~G~~ 165 (673)
...+.|-.+|..++++ ..++.|||-|++..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 3567788899988886 45688999999999943
No 219
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=42.59 E-value=1.9e+02 Score=23.65 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=9.2
Q ss_pred HHhHHHHHHHHHHhcCCeeEEE
Q 005866 118 ENNAGNAAAALMARLAPKGKVL 139 (673)
Q Consensus 118 ~~~~~~~~~~l~~~~~~~~~V~ 139 (673)
.+++.+..+++.+.+.+--+|.
T Consensus 24 qkK~~k~~~~m~~~L~~Gd~Vv 45 (84)
T TIGR00739 24 QRKRRKAHKKLIESLKKGDKVL 45 (84)
T ss_pred HHHHHHHHHHHHHhCCCCCEEE
Confidence 3444444444444443333333
No 220
>PLN02151 trehalose-phosphatase
Probab=42.33 E-value=52 Score=34.85 Aligned_cols=62 Identities=19% Similarity=0.176 Sum_probs=43.2
Q ss_pred hhHHHHHHHHhhC-C------CEEEEECCCCCCHHHHhhC-----CeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQAR-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g------~~v~~iGDg~ND~~al~~A-----dvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
-+|...++.+.+. + ..++++||...|-.|++.. ++||-+|.+.. ...|++.|.+ -+.+...+
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHH
Confidence 4898888877653 1 2489999999999999863 67777774332 2357788744 66666555
No 221
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=41.98 E-value=1.4e+02 Score=30.25 Aligned_cols=44 Identities=16% Similarity=0.025 Sum_probs=32.9
Q ss_pred EEEecccCCCCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHH
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGR 527 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~-gi~v~m~TGD~~~~a~~ia~ 527 (673)
+..--...++-++..+.++.|... ...++++||.+.........
T Consensus 32 i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 32 IVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 333345566778899999999887 44699999999877666554
No 222
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=41.84 E-value=1.3e+02 Score=27.65 Aligned_cols=21 Identities=19% Similarity=0.091 Sum_probs=15.4
Q ss_pred EEEEEeCCCCCCCcEEEEcCC
Q 005866 143 RWNEQDASILVPGDIISIKLG 163 (673)
Q Consensus 143 ~~~~i~~~~Lv~GDiI~l~~G 163 (673)
+...+++..+.-|-+|++...
T Consensus 97 ~~v~VNst~l~dG~iVki~~~ 117 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIGDK 117 (149)
T ss_pred heEEEecccccCCeEEEECCc
Confidence 356678888888888887743
No 223
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.94 E-value=1.5e+02 Score=30.78 Aligned_cols=45 Identities=13% Similarity=0.151 Sum_probs=31.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCChHH------HHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v---~m~TGD~~~~------a~~ia~~~gi~~ 533 (673)
+.++++++.++.++.+++.|++. .++-||++.. -...|+++|+..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 65 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRS 65 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 45678888999999998888763 4556877643 344567788853
No 224
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=39.75 E-value=2.6e+02 Score=24.56 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=43.1
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEECCCCC--CHHHHhhCCeeEEccc--ccHHHHhhcCEEEcCCChhHHHHHHHHHH
Q 005866 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVN--DAPALKKADIGIAVAD--ATDAARSASDIVLTEPGLSVIISAVLTSR 640 (673)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~N--D~~al~~AdvGia~~~--~~~~a~~aad~vl~~~~~~~i~~~i~~gr 640 (673)
+.+..+.-...+++.+.. -..+...|-|.| |..+++.-+|-++=.. .++..-+.+ ..+--..-+.++
T Consensus 43 i~~~~~~~~~~~l~~~~~-Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~~~aVAE~a--------~~T~e~~~~~~~ 113 (133)
T PF00389_consen 43 IVGSGTPLTAEVLEAAPN-LKLISTAGAGVDNIDLEAAKERGIPVTNVPGYNAEAVAEHA--------GYTDEARERMAE 113 (133)
T ss_dssp EESTTSTBSHHHHHHHTT--SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTTHHHHHHHH--------TGBHHHHHHHHH
T ss_pred EEcCCCCcCHHHHhccce-eEEEEEcccccCcccHHHHhhCeEEEEEeCCcCCcchhccc--------hhHHHHHHHHHH
Confidence 444444122455666643 347888999998 7888888888887542 222232333 333333345566
Q ss_pred HHHHHHHHHH
Q 005866 641 AIFQRMKNYT 650 (673)
Q Consensus 641 ~~~~~i~~~~ 650 (673)
...+|+..|+
T Consensus 114 ~~~~ni~~~l 123 (133)
T PF00389_consen 114 IAAENIERFL 123 (133)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777777654
No 225
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=39.19 E-value=5e+02 Score=30.34 Aligned_cols=84 Identities=11% Similarity=0.177 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcch-HHHHHHHHhCCCeEEEEcCCChH
Q 005866 442 DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDS-AETIRRALNLGVNVKMITGDQLA 520 (673)
Q Consensus 442 ~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~-~~~I~~l~~~gi~v~m~TGD~~~ 520 (673)
..++...+.++++.+.|.++..+.-+.-.....-. .-+|+-.+.=+..|+- .+.|+.+++.|. +++.|||-.+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA-----~elGId~v~A~~~PedK~~iV~~lQ~~G~-~VaMtGDGvN 518 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-----AEAGVDDFLAEATPEDKLALIRQEQAEGR-LVAMTGDGTN 518 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-----HHcCCcEEEccCCHHHHHHHHHHHHHcCC-eEEEECCCcc
Confidence 45677788889999999998776543211000000 0122222233455654 457899998884 5677899988
Q ss_pred HHHHHHHH-hCC
Q 005866 521 IGKETGRR-LGM 531 (673)
Q Consensus 521 ~a~~ia~~-~gi 531 (673)
-|-++++. +|+
T Consensus 519 DAPALa~ADVGI 530 (679)
T PRK01122 519 DAPALAQADVGV 530 (679)
T ss_pred hHHHHHhCCEeE
Confidence 88777663 454
No 226
>PF15584 Imm44: Immunity protein 44
Probab=38.87 E-value=14 Score=30.44 Aligned_cols=19 Identities=37% Similarity=0.436 Sum_probs=15.8
Q ss_pred CCcEEEEcCCCeeeceEEE
Q 005866 154 PGDIISIKLGDIIPADARL 172 (673)
Q Consensus 154 ~GDiI~l~~G~~vPaD~~l 172 (673)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556788999999999985
No 227
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=37.44 E-value=78 Score=25.89 Aligned_cols=14 Identities=29% Similarity=0.235 Sum_probs=12.0
Q ss_pred CCCCCCcEEEEcCC
Q 005866 150 SILVPGDIISIKLG 163 (673)
Q Consensus 150 ~~Lv~GDiI~l~~G 163 (673)
++|+|||-|....|
T Consensus 36 ~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 36 ESLKKGDKVLTIGG 49 (84)
T ss_pred HhCCCCCEEEECCC
Confidence 47999999998887
No 228
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=37.42 E-value=1.4e+02 Score=28.04 Aligned_cols=106 Identities=19% Similarity=0.135 Sum_probs=65.0
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChH-HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHH
Q 005866 496 DSAETIRRALNLGVNVKMITGDQLA-IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~v~m~TGD~~~-~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (673)
|.-.++..++..+-++.+++=.+.. ....+...+|+. ...+.-.+|++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 4455666666556667766655433 255666666652 1245556678878
Q ss_pred HHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHH-hhcCEEEcCCChhHHHHHHHHHHHHHHHHHH
Q 005866 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-SASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648 (673)
Q Consensus 575 ~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~-~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~ 648 (673)
..++.++..|. -+.+|++.- .+.|+ .--..++...+-+++..++.+++++.+..++
T Consensus 116 ~~i~~~~~~G~-~viVGg~~~-----------------~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGV-DVIVGGGVV-----------------CRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHHH-----------------HHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-cEEECCHHH-----------------HHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 88899988884 456676631 12222 2234677778899999999999999887764
No 229
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=37.16 E-value=29 Score=21.86 Aligned_cols=15 Identities=40% Similarity=0.627 Sum_probs=13.0
Q ss_pred CCCCCHHHHHHHHhh
Q 005866 34 REGLSSQAAEERLSI 48 (673)
Q Consensus 34 ~~GL~~~~~~~r~~~ 48 (673)
+.|||.+|+.+|+..
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999864
No 230
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=36.51 E-value=83 Score=31.29 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=59.1
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH-
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK- 573 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K- 573 (673)
++..++++.||+.|..+.++|-=.. ....+-..+|+... ++. ++.+.+ ..-..|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~-fD~-vv~S~e-------------------~g~~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAY-FDF-VVESCE-------------------VGLEKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHh-hhh-hhhhhh-------------------hccCCCChHH
Confidence 3555999999999988888873222 22244455565311 111 111100 011113222
Q ss_pred -HHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCe-eEEcccccHHHHhhc
Q 005866 574 -YEIVKRLQARKHICGMTGDG-VNDAPALKKADI-GIAVADATDAARSAS 620 (673)
Q Consensus 574 -~~iv~~l~~~g~~v~~iGDg-~ND~~al~~Adv-Gia~~~~~~~a~~aa 620 (673)
...++.+.-+...++++||. .||...-+.++. ++-+.++....++..
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~ 223 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELE 223 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhh
Confidence 34455666666789999998 599999998885 454555555444433
No 231
>PRK10671 copA copper exporting ATPase; Provisional
Probab=35.74 E-value=4.2e+02 Score=31.84 Aligned_cols=31 Identities=10% Similarity=0.090 Sum_probs=19.1
Q ss_pred hhhHHHHHHHHHhhcCCcchHHHHHHHHHHH
Q 005866 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (673)
Q Consensus 275 ~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 305 (673)
..++...+..+.++.|.+.|+++..+...++
T Consensus 469 ~~a~~vlv~acPcaL~la~p~a~~~~~~~~a 499 (834)
T PRK10671 469 VIATTVLIIACPCALGLATPMSIISGVGRAA 499 (834)
T ss_pred HHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Confidence 3445555556667777777777666666554
No 232
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=35.16 E-value=1.1e+02 Score=28.62 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=43.1
Q ss_pred CChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCC
Q 005866 439 NKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 518 (673)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~ 518 (673)
++.....-|..+++.+++.|=-.++++... =-+.+..+++..++.|++++.+||++
T Consensus 91 NDy~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~ 146 (176)
T COG0279 91 NDYGYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKD 146 (176)
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 344455667777888888886666555432 12468899999999999999999998
Q ss_pred hHH
Q 005866 519 LAI 521 (673)
Q Consensus 519 ~~~ 521 (673)
-..
T Consensus 147 GG~ 149 (176)
T COG0279 147 GGK 149 (176)
T ss_pred Ccc
Confidence 533
No 233
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.05 E-value=1.6e+02 Score=30.37 Aligned_cols=45 Identities=20% Similarity=0.277 Sum_probs=30.3
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCChH------HHHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLA------IGKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~-gi~v---~m~TGD~~~------~a~~ia~~~gi~~ 533 (673)
+..+++++.++.++.+++. |++. .++-||++. .....|+++||..
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~ 64 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMAS 64 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 4456778888888888876 6653 445577753 3455677888853
No 234
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=34.93 E-value=1e+02 Score=31.35 Aligned_cols=39 Identities=15% Similarity=0.045 Sum_probs=27.3
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG 606 (673)
.+|+-=..+++.+......++||||.. .|..+-+.|++-
T Consensus 203 P~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~ 242 (279)
T TIGR01452 203 PSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMT 242 (279)
T ss_pred CCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCc
Confidence 334333344555544557899999995 999999999876
No 235
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=34.67 E-value=1.1e+02 Score=26.37 Aligned_cols=47 Identities=21% Similarity=0.320 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCC
Q 005866 100 FVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLG 163 (673)
Q Consensus 100 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G 163 (673)
...++.++++..++-|+.-+..+|+.++.++.. ++|+|||-|.-..|
T Consensus 4 ~~~ll~lv~i~~i~yF~~iRPQkKr~K~~~~m~-----------------~~Lk~GD~VvT~gG 50 (109)
T PRK05886 4 LVLFLPFLLIMGGFMYFASRRQRKAMQATIDLH-----------------ESLQPGDRVHTTSG 50 (109)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH-----------------HhcCCCCEEEECCC
No 236
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=34.28 E-value=87 Score=25.24 Aligned_cols=46 Identities=13% Similarity=0.260 Sum_probs=36.5
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEE-EcCCChHHHHHHHHHhCCC
Q 005866 487 MPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 487 i~~~D~lr~~~~~~I~~l~~~gi~v~m-~TGD~~~~a~~ia~~~gi~ 532 (673)
+.+.+..++.+.+..+.||+.|+++.+ ..+.+...-..-|...|+.
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 445567788899999999999999987 5666677777778888874
No 237
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=33.82 E-value=94 Score=32.06 Aligned_cols=36 Identities=28% Similarity=0.318 Sum_probs=25.2
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHH-HHHHHHhCC
Q 005866 496 DSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGM 531 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~v~m~TGD~~~~a-~~ia~~~gi 531 (673)
++...-+.|+..|.+++++|......+ .+..+.++.
T Consensus 64 GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 64 GAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 566667889999999999997664433 344455554
No 238
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.30 E-value=2e+02 Score=29.48 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=29.8
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCChHH------HHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------GKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~-gi~v---~m~TGD~~~~------a~~ia~~~gi~~ 533 (673)
+.+.+|++.++.++.+++. |++. .++.||++.. ....|+++|+..
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888888766 6543 4566777643 345677788753
No 239
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=32.38 E-value=1.8e+02 Score=34.53 Aligned_cols=159 Identities=15% Similarity=0.103 Sum_probs=83.9
Q ss_pred EECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEe
Q 005866 139 LRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIAT 218 (673)
Q Consensus 139 ~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~t 218 (673)
++-|....+...+.+|-|-+.++.. .-+|--.+.|++.-|+-. .|+. -..|..+..|+....=...+.=+..
T Consensus 261 l~~GDiv~v~~G~~IP~Dg~vi~g~--~~vdes~lTGEs~Pv~k~--~Gd~----V~aGt~~~~G~~~i~V~~~g~~s~l 332 (741)
T PRK11033 261 LRPGDVIEVAAGGRLPADGKLLSPF--ASFDESALTGESIPVERA--TGEK----VPAGATSVDRLVTLEVLSEPGASAI 332 (741)
T ss_pred CCCCCEEEECCCCEEecceEEEECc--EEeecccccCCCCCEecC--CCCe----eccCCEEcCceEEEEEEeccccCHH
Confidence 4568888999999999998888753 456888888877434332 2432 2356677777654331111111111
Q ss_pred cccccccchhhhhcc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHH
Q 005866 219 GVHTFFGKAAHLVDT-TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVL 297 (673)
Q Consensus 219 G~~T~~g~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~ 297 (673)
|.= ...+.+.... +.-....++....+....+.+.++.++++.++....+...+..++..+++.+.++...+.|+++
T Consensus 333 ~~I--~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~ 410 (741)
T PRK11033 333 DRI--LHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAI 410 (741)
T ss_pred HHH--HHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHH
Confidence 111 0011111111 2222335555665655444333333333222211111122334566667778899989999998
Q ss_pred HHHHHHHHHH
Q 005866 298 SVTMAIGSHR 307 (673)
Q Consensus 298 ~~~~~~~~~~ 307 (673)
..++..++++
T Consensus 411 ~~~l~~aar~ 420 (741)
T PRK11033 411 TSGLAAAARR 420 (741)
T ss_pred HHHHHHHHHC
Confidence 8888877644
No 240
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=32.38 E-value=56 Score=32.44 Aligned_cols=48 Identities=25% Similarity=0.232 Sum_probs=33.8
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEc---CCChHHHHH-HHHHhCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKE-TGRRLGMG 532 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~T---GD~~~~a~~-ia~~~gi~ 532 (673)
|++.-.+.+=|++.++|+.+++.|++++++| |........ +.+..|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4455556667799999999999999999998 555443333 33336663
No 241
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=31.30 E-value=1.3e+02 Score=25.44 Aligned_cols=11 Identities=27% Similarity=0.163 Sum_probs=4.6
Q ss_pred CCCCcEEEEcC
Q 005866 152 LVPGDIISIKL 162 (673)
Q Consensus 152 Lv~GDiI~l~~ 162 (673)
|++||-|...-
T Consensus 44 L~kGD~VvT~g 54 (97)
T COG1862 44 LKKGDEVVTIG 54 (97)
T ss_pred ccCCCEEEEcC
Confidence 44444444433
No 242
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=31.10 E-value=1.3e+02 Score=25.83 Aligned_cols=40 Identities=20% Similarity=0.173 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCC
Q 005866 107 LVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLG 163 (673)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G 163 (673)
+++..+.-++.-+..+|..++..+.. ++|+|||-|....|
T Consensus 25 vii~~i~yf~~~RpqkK~~k~~~~~~-----------------~~Lk~Gd~VvT~gG 64 (106)
T PRK05585 25 VVFFAIFYFLIIRPQQKRQKEHKKML-----------------SSLAKGDEVVTNGG 64 (106)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH-----------------HhcCCCCEEEECCC
Confidence 33334444555555666555543332 47999999988877
No 243
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=30.87 E-value=44 Score=29.32 Aligned_cols=80 Identities=14% Similarity=0.117 Sum_probs=53.2
Q ss_pred HHHHHcCCeEEEEEEeecCCCCC--CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC-e-EEEEcCCChHHHHHHHH
Q 005866 452 DKFAERGLRSLAVAYQEVPEGRK--DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-N-VKMITGDQLAIGKETGR 527 (673)
Q Consensus 452 ~~~~~~G~r~l~~a~~~~~~~~~--~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi-~-v~m~TGD~~~~a~~ia~ 527 (673)
.-+...|++|+.++-.. |.++. ...+.+-.++++-.......+.+++.++.|++.|. + .+++-|..+..-.+-.+
T Consensus 21 ~~l~~~G~~vi~lG~~v-p~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~ 99 (122)
T cd02071 21 RALRDAGFEVIYTGLRQ-TPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLK 99 (122)
T ss_pred HHHHHCCCEEEECCCCC-CHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHH
Confidence 34678899998887542 21110 11122336788888888888999999999999977 4 35666665544455566
Q ss_pred HhCCC
Q 005866 528 RLGMG 532 (673)
Q Consensus 528 ~~gi~ 532 (673)
+.|+.
T Consensus 100 ~~G~d 104 (122)
T cd02071 100 EMGVA 104 (122)
T ss_pred HCCCC
Confidence 88874
No 244
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=30.42 E-value=1.5e+02 Score=29.00 Aligned_cols=44 Identities=34% Similarity=0.376 Sum_probs=24.3
Q ss_pred chHHHHHHhhccccccccCCHHH---HHHHcCCCCCCCCHHHHHHHHhh
Q 005866 3 DKEEVLEAVLKETVDLENIPIEE---VFENLRCSREGLSSQAAEERLSI 48 (673)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~GL~~~~~~~r~~~ 48 (673)
++|..+.+.+.|.++....|-+| +.+.+. ++|++.+++++-.+.
T Consensus 59 e~~~~~~e~~re~~e~~~~pe~e~~el~~iy~--~~Gl~~~~a~~i~~~ 105 (213)
T PF01988_consen 59 ERDLYEAEREREEWELENNPEEEKEELVEIYR--AKGLSEEDAEEIAEE 105 (213)
T ss_pred hhhHHHHHhHHHHHHHHhChHhHHHHHHHHHH--HCCCCHHHHHHHHHH
Confidence 44445555555555555555333 333333 359999887765554
No 245
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.21 E-value=2.2e+02 Score=29.29 Aligned_cols=45 Identities=18% Similarity=0.169 Sum_probs=30.3
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCChH------HHHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLA------IGKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v---~m~TGD~~~------~a~~ia~~~gi~~ 533 (673)
+.+.+|++.++-++.++..|++. .+.-||++. .....|+++|+..
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHS 64 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEE
Confidence 45667888888888888777653 445577754 3345667778753
No 246
>COG5547 Small integral membrane protein [Function unknown]
Probab=30.19 E-value=2.4e+02 Score=21.14 Aligned_cols=48 Identities=21% Similarity=0.382 Sum_probs=24.2
Q ss_pred HHHHHHhHHH--HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 005866 65 FLGFMWNPLS--WVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120 (673)
Q Consensus 65 ~~~~~~~~~~--~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 120 (673)
++++++-|.. ++.++.+++.+.++ -|-+ +.++++.++......+.+++
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwKt-ilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWKT-ILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 4566666654 23333344433332 2333 34444556667777776665
No 247
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=30.02 E-value=3.1e+02 Score=27.36 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=31.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHH----HHHHHHHhCCC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGRRLGMG 532 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~----a~~ia~~~gi~ 532 (673)
.+=||+.+.++...+.|.+|.-+|-+.... +..--++.|++
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~ 166 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLP 166 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcc
Confidence 345799999999999999999999887544 33444556775
No 248
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.98 E-value=2e+02 Score=29.74 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=31.1
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCChH------HHHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLA------IGKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~-gi~---v~m~TGD~~~------~a~~ia~~~gi~~ 533 (673)
+.+++|++.++-++.+++. |++ ..++.||++. .....|+++|+..
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888888876 665 3566788764 3455677788854
No 249
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=29.95 E-value=47 Score=28.81 Aligned_cols=80 Identities=14% Similarity=0.211 Sum_probs=53.0
Q ss_pred HHHHHcCCeEEEEEEeecCCCCC--CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC-e-EEEEcCCChHHHHHHHH
Q 005866 452 DKFAERGLRSLAVAYQEVPEGRK--DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-N-VKMITGDQLAIGKETGR 527 (673)
Q Consensus 452 ~~~~~~G~r~l~~a~~~~~~~~~--~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi-~-v~m~TGD~~~~a~~ia~ 527 (673)
.-+...|++|+.++.. .+.++. ...+.+..++|+-...++--+.+++.++.+|+.+- + .+++-|-........++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 4456799999777632 332211 11233446888888777777899999999999976 4 45777766554345778
Q ss_pred HhCCC
Q 005866 528 RLGMG 532 (673)
Q Consensus 528 ~~gi~ 532 (673)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88864
No 250
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=29.93 E-value=3.9e+02 Score=26.22 Aligned_cols=40 Identities=25% Similarity=0.219 Sum_probs=21.7
Q ss_pred HHhhccccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhh
Q 005866 9 EAVLKETVDLENIPIEEVFENLRCS-REGLSSQAAEERLSI 48 (673)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~ 48 (673)
...+.|.+..++.|-+|..+-..-. .+|++.+++++..++
T Consensus 71 ~~~~~e~~~i~~~p~~e~~el~~~~~~~G~~~~~a~~~a~~ 111 (218)
T cd02432 71 ADIAKERRELAEDPEAELEELADIYEERGLSPELARQVADE 111 (218)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3444445555666644443322222 469998877766544
No 251
>PLN02645 phosphoglycolate phosphatase
Probab=29.82 E-value=1e+02 Score=32.02 Aligned_cols=59 Identities=14% Similarity=0.127 Sum_probs=37.2
Q ss_pred HHHHHhhCCCEEEEECCCC-CCHHHHhhCCee-EEc--cccc--HHHH----hhcCEEEcCCChhHHHHHH
Q 005866 576 IVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAV--ADAT--DAAR----SASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 576 iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG-ia~--~~~~--~~a~----~aad~vl~~~~~~~i~~~i 636 (673)
+.+.+.-....++||||.. +|..+-+.|++- |.+ |.++ +... ..+|+++ +++..+...+
T Consensus 239 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 239 LANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 4444444556899999997 999999999954 233 3222 2211 2468877 4566666544
No 252
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=29.49 E-value=87 Score=32.09 Aligned_cols=48 Identities=21% Similarity=0.335 Sum_probs=38.6
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH---HhCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMG 532 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~---~~gi~ 532 (673)
|++...+.+=|+++++++.|++.|-++..+|-..-.+-...++ .+|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 7777789999999999999999999999999887655555544 45554
No 253
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=29.45 E-value=5e+02 Score=26.86 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=25.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
|+..++.+. +..+|+-|....+....|+..+++
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 444445444 567899999999999999998875
No 254
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=28.83 E-value=60 Score=26.76 Aligned_cols=28 Identities=29% Similarity=0.160 Sum_probs=21.5
Q ss_pred CeeEEEECCEEEEEeCCCCCCCcEEEEc
Q 005866 134 PKGKVLRDGRWNEQDASILVPGDIISIK 161 (673)
Q Consensus 134 ~~~~V~r~g~~~~i~~~~Lv~GDiI~l~ 161 (673)
....+.++|..+.+.+++|++||.|.+.
T Consensus 72 H~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 72 HLLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred CEEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 3455666777677899999999999874
No 255
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=28.13 E-value=97 Score=25.15 Aligned_cols=13 Identities=38% Similarity=0.470 Sum_probs=0.0
Q ss_pred CCCCCcEEEEcCC
Q 005866 151 ILVPGDIISIKLG 163 (673)
Q Consensus 151 ~Lv~GDiI~l~~G 163 (673)
+|+|||-|....|
T Consensus 36 ~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 36 SLKPGDEVVTIGG 48 (82)
T ss_dssp -------------
T ss_pred cCCCCCEEEECCc
Confidence 4666666666555
No 256
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=27.72 E-value=7.3e+02 Score=25.99 Aligned_cols=51 Identities=18% Similarity=0.113 Sum_probs=40.9
Q ss_pred CCCeEEEEEecccCCCCcchHHHHHHHHhC---CCeEEEEcCCChHHHHHHHHH
Q 005866 478 GGPWQFMGLMPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 528 (673)
Q Consensus 478 e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~---gi~v~m~TGD~~~~a~~ia~~ 528 (673)
..+|.=+=+++=..-+-||..++++.++.. |..+...+-|++..|++++.-
T Consensus 164 ~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 164 GWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 455665666666667889999999999998 999988888999888888764
No 257
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=27.53 E-value=2.7e+02 Score=27.51 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=19.1
Q ss_pred HhhccccccccCCHHHHHHHcCCC-CCCCCHHHHHH
Q 005866 10 AVLKETVDLENIPIEEVFENLRCS-REGLSSQAAEE 44 (673)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~ 44 (673)
+.+.|.+...+.|-+|..+-..-. .+|++.+++++
T Consensus 67 e~~re~~~i~~~pe~E~~el~~iy~~kG~~~~~a~~ 102 (225)
T cd02434 67 EKKREEWEIENYPEGEKSEMVEIYSLKGLSEEVADQ 102 (225)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHcCCCHHHHHH
Confidence 344444555555544433332222 57999988776
No 258
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=27.42 E-value=47 Score=32.81 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=30.3
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 497 ~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
..++++ +++.|+.++++||+....+..+.+.+++.
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 345666 68999999999999999999999999874
No 259
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=27.41 E-value=70 Score=31.63 Aligned_cols=61 Identities=21% Similarity=0.242 Sum_probs=29.9
Q ss_pred EecChhhHHHHHHHHhhC-C------CEEEEECCCCCCHHHHhhC------CeeEEccccc-HHHHhhcCEEEcC
Q 005866 566 AGVFPEHKYEIVKRLQAR-K------HICGMTGDGVNDAPALKKA------DIGIAVADAT-DAARSASDIVLTE 626 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~-g------~~v~~iGDg~ND~~al~~A------dvGia~~~~~-~~a~~aad~vl~~ 626 (673)
.|..-..|...++.+-+. + ..++++||...|-.|++.. +++|-++..+ ..-..+|++-+.+
T Consensus 159 vrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 159 VRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 344444598888877554 2 3699999999999999873 5577777543 2233456665544
No 260
>PRK04980 hypothetical protein; Provisional
Probab=26.45 E-value=83 Score=26.77 Aligned_cols=57 Identities=25% Similarity=0.375 Sum_probs=39.0
Q ss_pred CCeeEEEECCEEEEEeCCCCCCCcEEEEc--CCCeeeceEEEEecCCeeEec-----ccccCCCCcccC
Q 005866 133 APKGKVLRDGRWNEQDASILVPGDIISIK--LGDIIPADARLLEGDPLKIDQ-----SALTGESLPVTK 194 (673)
Q Consensus 133 ~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~--~G~~vPaD~~ll~g~~l~Vde-----s~LTGEs~pv~k 194 (673)
..+..-+||+. ....+|||++.|. .+.+.-|+..+++-..+.+|| +..-|+|.+--|
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk 81 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELK 81 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHH
Confidence 45556677753 3579999999997 788999999999766433333 344566655444
No 261
>PLN03190 aminophospholipid translocase; Provisional
Probab=26.40 E-value=1.8e+02 Score=36.42 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=19.1
Q ss_pred CCCcEEEEcCCCeeeceEEEEecC
Q 005866 153 VPGDIISIKLGDIIPADARLLEGD 176 (673)
Q Consensus 153 v~GDiI~l~~G~~vPaD~~ll~g~ 176 (673)
.-|....++..+..|=|.+.+..+
T Consensus 177 ~~~~~~~i~~~~i~vGDiv~v~~g 200 (1178)
T PLN03190 177 VDDQFQEKKWKDIRVGEIIKIQAN 200 (1178)
T ss_pred ECCeEEEEeHHHCCCCCEEEECCC
Confidence 457788888888999999998643
No 262
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=26.32 E-value=1.6e+02 Score=29.08 Aligned_cols=101 Identities=18% Similarity=0.120 Sum_probs=58.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC-CCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.+-||+.+.++.|+..|+.+.++|+-+..+...--...+ +.. .+...++ |...+-. .....|
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~-~d~~~v~---------------~gKP~P 154 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVL-GDDPEVK---------------NGKPDP 154 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCee-cCCcccc---------------CCCCCc
Confidence 344599999999999999999999996554433333333 321 1122222 2221100 011223
Q ss_pred hhHHHHHHHHhhCC-CEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 571 EHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 571 ~~K~~iv~~l~~~g-~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
+-=..-.+.+.... ..++++.|..+=..|-++|+.=+-+
T Consensus 155 di~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 155 DIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred hHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 33233444555555 6788888888888887777765443
No 263
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=26.02 E-value=45 Score=24.65 Aligned_cols=12 Identities=33% Similarity=0.667 Sum_probs=10.3
Q ss_pred CCCcEEEEcCCC
Q 005866 153 VPGDIISIKLGD 164 (673)
Q Consensus 153 v~GDiI~l~~G~ 164 (673)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999884
No 264
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=25.14 E-value=50 Score=30.39 Aligned_cols=27 Identities=33% Similarity=0.395 Sum_probs=23.4
Q ss_pred hhhhcCceEEEecccCccccCceEeee
Q 005866 321 IEEMAGMDVLCSDKTGTLTLNKLTVDK 347 (673)
Q Consensus 321 le~lg~v~~i~~DKTGTLT~~~m~v~~ 347 (673)
.+.+.++..+++|=-||||.|++-+..
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG~ly~~~ 28 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDGKLYYDE 28 (170)
T ss_pred hhhhhhceEEEEeccceeecCeEEEcC
Confidence 467888999999999999999987753
No 265
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=25.01 E-value=1.2e+02 Score=26.19 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=27.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi 531 (673)
--+++.++++.+++.|++++.+|++.. -...+.+-|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 345788999999999999999998874 2334554443
No 266
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=24.97 E-value=59 Score=30.11 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=19.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEc
Q 005866 494 RHDSAETIRRALNLGVNVKMIT 515 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~T 515 (673)
-++++++|++|.+.|++++|+|
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEe
Confidence 3579999999999999999998
No 267
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=24.80 E-value=1.7e+02 Score=27.77 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=27.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCh
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQL 519 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~ 519 (673)
+.-++-||+-++|++.++.|+++.+-|.-+.
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV 130 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSV 130 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCc
Confidence 4568889999999999999999999986663
No 268
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=24.62 E-value=1.2e+02 Score=27.20 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=18.1
Q ss_pred HHhHHHHHHHHHHhcCCeeEEEECCEEEEEeC
Q 005866 118 ENNAGNAAAALMARLAPKGKVLRDGRWNEQDA 149 (673)
Q Consensus 118 ~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~ 149 (673)
..|.+|+..++.+.--+...+..|-+|-.++.
T Consensus 53 ssRKkKaaAAi~eediQfinpyqDqqw~~v~p 84 (189)
T PF05568_consen 53 SSRKKKAAAAIEEEDIQFINPYQDQQWAGVTP 84 (189)
T ss_pred hhhhHHHHhhhhhhcccccCcccchhhccCCC
Confidence 34444455555555555566677777765543
No 269
>PRK08433 flagellar motor switch protein; Validated
Probab=24.45 E-value=63 Score=27.98 Aligned_cols=26 Identities=15% Similarity=0.276 Sum_probs=19.3
Q ss_pred EEEeCCCCCCCcEEEEcCCCeeeceE
Q 005866 145 NEQDASILVPGDIISIKLGDIIPADA 170 (673)
Q Consensus 145 ~~i~~~~Lv~GDiI~l~~G~~vPaD~ 170 (673)
..+...++.+.|++.+++||+||.|-
T Consensus 38 v~LG~t~itl~dlL~Lq~GDVI~Ld~ 63 (111)
T PRK08433 38 AELGTTQISLLEILKFEKGSVIDLEK 63 (111)
T ss_pred EEEecccccHHHHhCCCCCCEEEeCC
Confidence 44566677788888888888888764
No 270
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=24.37 E-value=6.8e+02 Score=25.63 Aligned_cols=137 Identities=13% Similarity=0.136 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEEeecCCCC-----C-------------CCCCCCeEEEEEecccCCCCcchHHHHHHHH
Q 005866 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGR-----K-------------DSPGGPWQFMGLMPLFDPPRHDSAETIRRAL 505 (673)
Q Consensus 444 ~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----~-------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~ 505 (673)
-.+....+.++.++||.++.++.+.=|+-. . +... ...-++++.=.=..+++..+.++.|+
T Consensus 99 V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~l~ 177 (280)
T TIGR00216 99 VTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFK-VEDLLGVVSQTTLSQEDTKEIVAELK 177 (280)
T ss_pred cHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCC-CCCcEEEEEcCCCcHHHHHHHHHHHH
Confidence 446677888999999999999977533210 0 0000 00113333333333444455555555
Q ss_pred hCC--C------eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHH
Q 005866 506 NLG--V------NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIV 577 (673)
Q Consensus 506 ~~g--i------~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 577 (673)
+.. . .++-.|-+....+..+|+++.+. -|...-....=.++.
T Consensus 178 ~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m------------------------------iVVGg~nSsNT~rL~ 227 (280)
T TIGR00216 178 ARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM------------------------------IVIGGKNSSNTTRLY 227 (280)
T ss_pred HhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE------------------------------EEECCCCCchHHHHH
Confidence 443 1 13344555555555555554321 123333333334677
Q ss_pred HHHhhCCCEEEEECCCC-CCHHHHhhCC-eeEEccc
Q 005866 578 KRLQARKHICGMTGDGV-NDAPALKKAD-IGIAVAD 611 (673)
Q Consensus 578 ~~l~~~g~~v~~iGDg~-ND~~al~~Ad-vGia~~~ 611 (673)
+..++.|..+..+.+-. -|...|+.++ |||.-|.
T Consensus 228 ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAGA 263 (280)
T TIGR00216 228 EIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAGA 263 (280)
T ss_pred HHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEecC
Confidence 77777777777776543 4666777654 6777773
No 271
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=24.24 E-value=3.7e+02 Score=27.05 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=26.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeE-EEEcCCCh-HHHHHHHHHh
Q 005866 490 FDPPRHDSAETIRRALNLGVNV-KMITGDQL-AIGKETGRRL 529 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v-~m~TGD~~-~~a~~ia~~~ 529 (673)
-|.+-++..+.++.+++.|+.. .+++-... +....+++..
T Consensus 122 pDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 122 ADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 3555577889999999999984 46665553 4445566554
No 272
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=24.15 E-value=1.2e+03 Score=27.40 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCc-EEEEcCCCeeeceEEEEe-cCCeeEe
Q 005866 104 ITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGD-IISIKLGDIIPADARLLE-GDPLKID 181 (673)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GD-iI~l~~G~~vPaD~~ll~-g~~l~Vd 181 (673)
.+++++..+-++++.+.+.|+.+++.++..-.-+..+ . +. .++ ...+...+.-|=|.+++. |+-+-+|
T Consensus 178 a~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~----~-~~-----~~~~~~~v~v~~v~~GD~v~VrpGE~IPvD 247 (713)
T COG2217 178 AMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTAT----V-VR-----GDGEEEEVPVEEVQVGDIVLVRPGERIPVD 247 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEE----E-Ee-----cCCcEEEEEHHHCCCCCEEEECCCCEecCC
Confidence 3445566667788888888888888777543332111 1 11 122 666666666677777764 4444444
Q ss_pred cccccCCC
Q 005866 182 QSALTGES 189 (673)
Q Consensus 182 es~LTGEs 189 (673)
=-.+.|+|
T Consensus 248 G~V~~G~s 255 (713)
T COG2217 248 GVVVSGSS 255 (713)
T ss_pred eEEEeCcE
Confidence 44444444
No 273
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=23.95 E-value=3.2e+02 Score=27.63 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=43.8
Q ss_pred CCcchHHHHHHHHhCCCeE-EEEcCCC-hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 493 PRHDSAETIRRALNLGVNV-KMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v-~m~TGD~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
+-++..+.++.+++.|+.. .++|-.. .+....+++...=.--.....-.+|. ....|
T Consensus 127 p~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~gfIY~vs~~GvTG~---------------------~~~~~ 185 (258)
T PRK13111 127 PPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASGFVYYVSRAGVTGA---------------------RSADA 185 (258)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCc---------------------ccCCC
Confidence 3357777778888888764 4466655 34455555543110000000001111 01123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAP 598 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~ 598 (673)
.+-.+.++.+++....-+++|=|+++..
T Consensus 186 ~~~~~~i~~vk~~~~~pv~vGfGI~~~e 213 (258)
T PRK13111 186 ADLAELVARLKAHTDLPVAVGFGISTPE 213 (258)
T ss_pred ccHHHHHHHHHhcCCCcEEEEcccCCHH
Confidence 4445677777776555667899996544
No 274
>PLN02423 phosphomannomutase
Probab=23.63 E-value=1.1e+02 Score=30.49 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=25.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIG 522 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a 522 (673)
++.+...++|++|++. ++++++||+.....
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~ 53 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKI 53 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHH
Confidence 5788999999999976 99999999976543
No 275
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=23.52 E-value=9.2e+02 Score=27.20 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=51.1
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHH
Q 005866 496 DSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~v~m~TGD~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (673)
|.-.++..+++.+-++.+++=.+. ..+..++.-+++. ..++.-.++++=.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 135 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD-----------------------------IVQRSYVTEEDAR 135 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 566778888887778877775554 5566677777763 1357777888888
Q ss_pred HHHHHHhhCCCEEEEECCCCC
Q 005866 575 EIVKRLQARKHICGMTGDGVN 595 (673)
Q Consensus 575 ~iv~~l~~~g~~v~~iGDg~N 595 (673)
..++.+++.|..+ .+||+.-
T Consensus 136 ~~~~~l~~~G~~~-viG~~~~ 155 (526)
T TIGR02329 136 SCVNDLRARGIGA-VVGAGLI 155 (526)
T ss_pred HHHHHHHHCCCCE-EECChHH
Confidence 9999999999654 6788843
No 276
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=23.37 E-value=1.4e+02 Score=24.39 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=36.2
Q ss_pred EEecccC---CCCcchHHHHHHHHhCCCeEEEE-cCCChHHHHHHHHHhCCC
Q 005866 485 GLMPLFD---PPRHDSAETIRRALNLGVNVKMI-TGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 485 G~i~~~D---~lr~~~~~~I~~l~~~gi~v~m~-TGD~~~~a~~ia~~~gi~ 532 (673)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 3455556 66677888999999999998887 555566667778888874
No 277
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=23.01 E-value=2.5e+02 Score=30.08 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=48.5
Q ss_pred chHHHHHHHHhCCCe--EEEEcCCChHHHH-HHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 496 DSAETIRRALNLGVN--VKMITGDQLAIGK-ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~--v~m~TGD~~~~a~-~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
|+..++..+-+.+-+ |+-.|+-|...|. .-|+++|++.. .|.-..+|..
T Consensus 100 Ga~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaT----------------------------IVmP~~tp~~ 151 (457)
T KOG1250|consen 100 GAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPAT----------------------------IVMPVATPLM 151 (457)
T ss_pred hHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceE----------------------------EEecCCChHH
Confidence 677888888776633 6777777765544 45789999743 2556677877
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHH
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAP 598 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~ 598 (673)
|. +.++..|..|...|+..--+.
T Consensus 152 ki---q~~~nlGA~Vil~G~~~deAk 174 (457)
T KOG1250|consen 152 KI---QRCRNLGATVILSGEDWDEAK 174 (457)
T ss_pred HH---HHHhccCCEEEEecccHHHHH
Confidence 74 455666778888887754433
No 278
>COG4996 Predicted phosphatase [General function prediction only]
Probab=22.72 E-value=2e+02 Score=25.72 Aligned_cols=53 Identities=19% Similarity=0.116 Sum_probs=43.2
Q ss_pred CeEEEEEecccC------CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 480 PWQFMGLMPLFD------PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 480 ~l~~lG~i~~~D------~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
+++.+.--.++| .++++++++++.+|+.|.-+-.+|=.-+..|...-+.+++.
T Consensus 23 Pf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 23 PFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred cceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 344444444454 48999999999999999999999999999999988888875
No 279
>PF13748 ABC_membrane_3: ABC transporter transmembrane region
Probab=22.62 E-value=5.4e+02 Score=25.54 Aligned_cols=39 Identities=13% Similarity=0.014 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCE
Q 005866 105 TLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGR 143 (673)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~ 143 (673)
.++++..++-..-.+++.+...+|++..++++.+++.++
T Consensus 146 ~~l~~~~~i~~~f~~~~~~L~~~LNnrlE~eV~~i~~~~ 184 (237)
T PF13748_consen 146 LILALFLLILPRFARRNYRLYRRLNNRLEKEVDIIERRK 184 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHhhcCC
Confidence 333344444444555666666778888888888776654
No 280
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=22.34 E-value=2.7e+02 Score=22.47 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=26.7
Q ss_pred EEecccCCC-CcchHHHHHHHHhCCCeEEEEcCCC
Q 005866 485 GLMPLFDPP-RHDSAETIRRALNLGVNVKMITGDQ 518 (673)
Q Consensus 485 G~i~~~D~l-r~~~~~~I~~l~~~gi~v~m~TGD~ 518 (673)
-.+.++-+= ++...+.++.|+++|+++...|.+.
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~ 76 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDDE 76 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCH
Confidence 345566665 7789999999999999998877554
No 281
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=22.31 E-value=1.5e+02 Score=26.70 Aligned_cols=80 Identities=11% Similarity=0.136 Sum_probs=49.4
Q ss_pred HHHHcCCeEEEEEEeecCCCC-CCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCCCh---H---HHH
Q 005866 453 KFAERGLRSLAVAYQEVPEGR-KDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV--NVKMITGDQL---A---IGK 523 (673)
Q Consensus 453 ~~~~~G~r~l~~a~~~~~~~~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi--~v~m~TGD~~---~---~a~ 523 (673)
-+...|+.|+.++...-++.- ....+.+-.++|+-++-=.--+..+++++.|+++|. ..+++-|-.. . .-.
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 456789999888765422210 011122346777777666666678999999999987 3566666421 1 123
Q ss_pred HHHHHhCCC
Q 005866 524 ETGRRLGMG 532 (673)
Q Consensus 524 ~ia~~~gi~ 532 (673)
.-++++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 456888864
No 282
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=22.29 E-value=92 Score=23.21 Aligned_cols=24 Identities=29% Similarity=0.412 Sum_probs=18.2
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCC
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQ 518 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~ 518 (673)
|+-++.++.|.++|++|-|.|-+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 567899999999999999998664
No 283
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=22.26 E-value=1.6e+02 Score=23.25 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=34.6
Q ss_pred EecccCCCCcchHHHHHHHHhCCCeEEEEc-CCChHHHHHHHHHhCCC
Q 005866 486 LMPLFDPPRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 532 (673)
Q Consensus 486 ~i~~~D~lr~~~~~~I~~l~~~gi~v~m~T-GD~~~~a~~ia~~~gi~ 532 (673)
++.+.++.++.+.+..+.||++|+++.+.. +.+.......|...|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 344556677788889999999999988744 44666667777777763
No 284
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=22.17 E-value=6.1e+02 Score=23.94 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=16.6
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHhh
Q 005866 23 IEEVFENLRCSREGLSSQAAEERLSI 48 (673)
Q Consensus 23 ~~~~~~~l~~~~~GL~~~~~~~r~~~ 48 (673)
++++.+++.. ..++.+|+.+|+++
T Consensus 70 v~~l~~~~~~--~~~~~~ea~~~L~~ 93 (193)
T PF06738_consen 70 VNRLSRRIVA--GQLSLEEAIERLDE 93 (193)
T ss_pred HHHHHHHHhc--CCCCHHHHHHHHHH
Confidence 4444444433 67899999999877
No 285
>PRK15108 biotin synthase; Provisional
Probab=22.13 E-value=9.2e+02 Score=25.43 Aligned_cols=117 Identities=11% Similarity=0.080 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCC-CC--cchHHHHHHHHhCCCeEEEEcCCChH
Q 005866 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP-PR--HDSAETIRRALNLGVNVKMITGDQLA 520 (673)
Q Consensus 444 ~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~-lr--~~~~~~I~~l~~~gi~v~m~TGD~~~ 520 (673)
++++.+........|.+-+++ ..+.++| .+ +...+.++.+++.|+.+.+--|.-..
T Consensus 78 ~eEI~~~a~~~~~~G~~~i~i---------------------~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G~ls~ 136 (345)
T PRK15108 78 VEQVLESARKAKAAGSTRFCM---------------------GAAWKNPHERDMPYLEQMVQGVKAMGLETCMTLGTLSE 136 (345)
T ss_pred HHHHHHHHHHHHHcCCCEEEE---------------------EecCCCCCcchHHHHHHHHHHHHhCCCEEEEeCCcCCH
Confidence 345555666666777764322 2232344 33 56778888888888877644454433
Q ss_pred HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEE---EECCCCCCH
Q 005866 521 IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICG---MTGDGVNDA 597 (673)
Q Consensus 521 ~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~---~iGDg~ND~ 597 (673)
....--++.|++.-... ++ . ...... +++..-+.+++.+.++..++.|..+. ++|=|..+-
T Consensus 137 e~l~~LkeAGld~~n~~--------le----T--~p~~f~--~I~~~~~~~~rl~~i~~a~~~G~~v~sg~i~GlgEt~e 200 (345)
T PRK15108 137 SQAQRLANAGLDYYNHN--------LD----T--SPEFYG--NIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVK 200 (345)
T ss_pred HHHHHHHHcCCCEEeec--------cc----c--ChHhcC--CCCCCCCHHHHHHHHHHHHHcCCceeeEEEEeCCCCHH
Confidence 33333445676421000 00 0 001100 22344467888889999988876544 677776543
No 286
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=22.07 E-value=1e+03 Score=27.04 Aligned_cols=70 Identities=16% Similarity=0.166 Sum_probs=51.5
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHH
Q 005866 496 DSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~v~m~TGD~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (673)
|+-.++..+++.+-++.+++=.+. ..+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 566778888888778888876653 4556677777763 1356777888888
Q ss_pred HHHHHHhhCCCEEEEECCCCC
Q 005866 575 EIVKRLQARKHICGMTGDGVN 595 (673)
Q Consensus 575 ~iv~~l~~~g~~v~~iGDg~N 595 (673)
..|+.+++.|..+ .+||+.-
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH
Confidence 9999999999654 6788864
No 287
>cd02435 CCC1 CCC1. CCC1: This domain is present in the CCC1, an iron and manganese transporter of Saccharomyces cerevisiae. CCC1 is a transmembrane protein that is located in the vacuole and transfers the iron and manganese ions from the cytosol to the vacuole. This domain may be unique to certain fungi and plants.
Probab=21.88 E-value=3.4e+02 Score=27.12 Aligned_cols=36 Identities=17% Similarity=0.130 Sum_probs=18.5
Q ss_pred HhhccccccccCCHHHHHHHcCCC--CCCCCHHHHHHH
Q 005866 10 AVLKETVDLENIPIEEVFENLRCS--REGLSSQAAEER 45 (673)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~~~--~~GL~~~~~~~r 45 (673)
....|.+.....|-+|..+.+... ++|++.+++++.
T Consensus 85 ~~~~e~~~i~~~~~~E~~e~l~~~~~~~G~~~~~~~~~ 122 (241)
T cd02435 85 EHKRKQEAVEASPSTEQEEIILYDLVQYGLVPLETAAS 122 (241)
T ss_pred HHHHHHHHHhhCcHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 334444455555544444422221 579998766654
No 288
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=21.76 E-value=5.1e+02 Score=25.86 Aligned_cols=125 Identities=16% Similarity=0.270 Sum_probs=70.3
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHH
Q 005866 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIV 577 (673)
Q Consensus 498 ~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 577 (673)
.+.++.+.+.|.++.++ |..+.++...++.+.-. + ...+.|.. +-| ..|++...++
T Consensus 95 ~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~---y-~l~i~g~~-----------------~Gy--f~~~e~~~i~ 150 (243)
T PRK03692 95 EALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQ---W-NVNIVGSQ-----------------DGY--FTPEQRQALF 150 (243)
T ss_pred HHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHH---h-CCEEEEEe-----------------CCC--CCHHHHHHHH
Confidence 45667777789999999 77777766666655321 0 00111110 001 1366666788
Q ss_pred HHHhhCCCEEEEECCCCCCHH-------HHhhCCeeEEcccccH----HHHhhcCEEEcCCChhHHHHHHHHHHHHHHHH
Q 005866 578 KRLQARKHICGMTGDGVNDAP-------ALKKADIGIAVADATD----AARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (673)
Q Consensus 578 ~~l~~~g~~v~~iGDg~ND~~-------al~~AdvGia~~~~~~----~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i 646 (673)
+.+.+.+..++++|=|.-==+ ..-.+.+.+++|.+-| ..+ -|--..-.-++..+-+++.+=|+..+.+
T Consensus 151 ~~I~~s~~dil~VglG~PkQE~~~~~~~~~~~~~v~~gvGg~fD~~aG~~~-RAP~w~~~~gLEWlyRl~~EP~R~~R~~ 229 (243)
T PRK03692 151 ERIHASGAKIVTVAMGSPKQEIFMRDCRLVYPDALYMGVGGTYDVFTGHVK-RAPKIWQNLGLEWLYRLLSQPSRIRRQL 229 (243)
T ss_pred HHHHhcCCCEEEEECCCcHHHHHHHHHHHhCCCCEEEEeCeEEEEecCCcC-cCcHHHHHhChHHHHHhHhCcHHHHHHH
Confidence 888888888888888854211 1112344455543211 122 2333445567899999998877754443
Q ss_pred H
Q 005866 647 K 647 (673)
Q Consensus 647 ~ 647 (673)
.
T Consensus 230 ~ 230 (243)
T PRK03692 230 R 230 (243)
T ss_pred H
Confidence 3
No 289
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=21.67 E-value=1.4e+02 Score=29.77 Aligned_cols=36 Identities=25% Similarity=0.294 Sum_probs=33.2
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 005866 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (673)
Q Consensus 498 ~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~ 533 (673)
.+.|..|+++|+.|+-++-|...+-..+-+++||..
T Consensus 199 ~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 199 KNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 678999999999999999999999999999999964
No 290
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=21.23 E-value=2.9e+02 Score=34.21 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=50.3
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc--C--C
Q 005866 59 ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARL--A--P 134 (673)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~--~ 134 (673)
|..++.-|+.+.|.++++..+..++..+..... ...+...+.++++..+...++.+..+++.+....-.... . .
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~--~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~ 95 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVPILSPTYR--GTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQ 95 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCc--cHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCc
Confidence 344444455555555555444443321100000 013444556666666666677777666666554332221 0 1
Q ss_pred e----eEEEECCEEEEEeCCCCCCCcEEEEcC
Q 005866 135 K----GKVLRDGRWNEQDASILVPGDIISIKL 162 (673)
Q Consensus 135 ~----~~V~r~g~~~~i~~~~Lv~GDiI~l~~ 162 (673)
. ..=++-|....+...|.+|-|.+.+..
T Consensus 96 ~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~s 127 (1057)
T TIGR01652 96 FVEIPWKDLRVGDIVKVKKDERIPADLLLLSS 127 (1057)
T ss_pred EEEeeeecccCCCEEEEcCCCcccceEEEEec
Confidence 1 111334666667777777777777764
No 291
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.99 E-value=1.9e+02 Score=29.60 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=32.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCe---EEEEcCCChHH------HHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAI------GKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~---v~m~TGD~~~~------a~~ia~~~gi~~ 533 (673)
+..+++++.++-++.|++.|++ ..+..||++.. ....|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4566788899999999888876 45667888643 455677888854
No 292
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.81 E-value=2.1e+02 Score=29.33 Aligned_cols=45 Identities=13% Similarity=0.191 Sum_probs=31.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCChHH------HHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v---~m~TGD~~~~------a~~ia~~~gi~~ 533 (673)
+..+++++.++.++.|++.|++. .++-||++.. ....|+++|+..
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 34567888889999998878753 4566887643 345677788854
No 293
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.59 E-value=2.1e+02 Score=29.63 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=32.2
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCChH------HHHHHHHHhCCCC
Q 005866 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLA------IGKETGRRLGMGT 533 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v---~m~TGD~~~------~a~~ia~~~gi~~ 533 (673)
+.+.+|++.++-++.+++.|++. .++-||++. .....|+++|+..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEA 63 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667888889999998888753 455688864 3455677888854
No 294
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=20.52 E-value=5.2e+02 Score=21.78 Aligned_cols=26 Identities=15% Similarity=0.198 Sum_probs=12.5
Q ss_pred HHHhHHHHHHHHHHhcCCeeEEEECC
Q 005866 117 EENNAGNAAAALMARLAPKGKVLRDG 142 (673)
Q Consensus 117 ~~~~~~~~~~~l~~~~~~~~~V~r~g 142 (673)
-++++.+..+++.+.+.+-=+|+-.|
T Consensus 29 PQrKr~K~~~~ml~sL~kGD~VvT~g 54 (97)
T COG1862 29 PQRKRMKEHQELLNSLKKGDEVVTIG 54 (97)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEcC
Confidence 34444444555555554444555444
No 295
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=20.47 E-value=80 Score=27.56 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=22.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCh
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQL 519 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~ 519 (673)
-+++.++++.+|+.|++++.+|+...
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~ 85 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPN 85 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 35788999999999999999999764
No 296
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=20.35 E-value=1.1e+02 Score=31.44 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=29.0
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCe-EEEEcCCChH
Q 005866 482 QFMGLMPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLA 520 (673)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~-v~m~TGD~~~ 520 (673)
..+--+..+|.=|.+...-+..+++.|++ +.++|||.+.
T Consensus 72 ~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 72 EPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp -EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred ceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 45555667788788899999999999996 8899999753
No 297
>TIGR02988 YaaA_near_RecF S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage.
Probab=20.24 E-value=1.1e+02 Score=22.79 Aligned_cols=24 Identities=38% Similarity=0.691 Sum_probs=19.2
Q ss_pred EEEECCEEEEEeCCCCCCCcEEEE
Q 005866 137 KVLRDGRWNEQDASILVPGDIISI 160 (673)
Q Consensus 137 ~V~r~g~~~~i~~~~Lv~GDiI~l 160 (673)
.|.-||+...-+..-|.+||.|.+
T Consensus 35 ~V~VNg~~~~~~~~~l~~Gd~v~i 58 (59)
T TIGR02988 35 EVLVNGELENRRGKKLYPGDVIEI 58 (59)
T ss_pred CEEECCEEccCCCCCCCCCCEEEe
Confidence 344589877777889999999976
No 298
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair]
Probab=20.10 E-value=1.2e+02 Score=23.95 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=23.5
Q ss_pred eEEEECCEEEEEeCCCCCCCcEEEEcC
Q 005866 136 GKVLRDGRWNEQDASILVPGDIISIKL 162 (673)
Q Consensus 136 ~~V~r~g~~~~i~~~~Lv~GDiI~l~~ 162 (673)
-.|..||+...-.-+.|+.||+|.+..
T Consensus 37 g~V~vNGe~EtRRgkKlr~gd~V~i~~ 63 (73)
T COG2501 37 GEVKVNGEVETRRGKKLRDGDVVEIPG 63 (73)
T ss_pred CeEEECCeeeeccCCEeecCCEEEECC
Confidence 378889999999999999999999853
Done!