BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005869
(672 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359483569|ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
Length = 658
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/693 (62%), Positives = 510/693 (73%), Gaps = 61/693 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+P HIK+L+GC VAVDTYSWLHKGALSCS++LCK +PTSRHIDYCM
Sbjct: 1 MGIQGLLPLLKSIMVPFHIKDLKGCSVAVDTYSWLHKGALSCSKQLCKSIPTSRHIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRHYGV+PIL+FDGGLLPMKIEQENKRAR RKENLARAIE ES GNS+A+YE YQ
Sbjct: 61 HRVNLLRHYGVEPILVFDGGLLPMKIEQENKRARVRKENLARAIEHESNGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIA ELIQVLKQ+NVSYIVAPYEADAQMTFLAVS+QV+A+ITEDSD+IPFGC
Sbjct: 121 KAVDISPSIARELIQVLKQENVSYIVAPYEADAQMTFLAVSQQVDAIITEDSDMIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF+ SM+Q+NK+LSF GFTKQM+LEMCILSGCDYLQSLPGMGLK+AH
Sbjct: 181 RIIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEMCILSGCDYLQSLPGMGLKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI KFKSYDKVIKHL+Y+T SVPP YEESF KA+LTFQHQRVYDP EDIVHLS +SDN
Sbjct: 241 ALIKKFKSYDKVIKHLRYATGSVPPLYEESFKKAMLTFQHQRVYDPTIEDIVHLSVLSDN 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERK 352
+G+DLDFL AKGIA GDLDPFT++PFQ + + L++ L++FKPESERK
Sbjct: 301 VGDDLDFLGPLISQDIAKGIATGDLDPFTKMPFQGQNASDGLLLDGTYQLESFKPESERK 360
Query: 353 KLDLPVQKNLLTK-----------KFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
K++LP QKNLLT KF PRI+PN +P P +C
Sbjct: 361 KIELPAQKNLLTNYFCFTSLEAKGKFRAPRITPNDSNP--VHGFPP-----------TTC 407
Query: 402 QSSSRMELETVGN-FPHNSSEKNCFASEVPEFSASPSREMENERNAEHTSLPQFCRSIRN 460
S+S ++ +GN P N S ++ A++ PEF S S
Sbjct: 408 LSASVLKSGNLGNATPSNDSVEDVGAAKTPEFIESASH---------------------- 445
Query: 461 PCPALRKEHENKNCTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAA 520
AL KEHE K D+ GK ENRK+IVRS YF HK V ++D++N+ EKL+V N A
Sbjct: 446 ---ALHKEHECKYDLDAAEGKMPVENRKIIVRSRYFQHKSVKENDRDNENEKLLVNNGDA 502
Query: 521 IDMSENTGLQSAHFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDPNL 580
D+ EN QS F+ +YLK +KRK + +DS+ D + +K MRTNASL N DP++
Sbjct: 503 TDICENKSPQSP-FENNYLKSAIMKRKPTSVDSIQPD-VKAKYMRTNASLANRSNCDPDI 560
Query: 581 DKTIATETDEAKFGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVR 640
D T KFG+NISHLG YS+IAEKSMERFVSV+S + +SGSRASGLRAPL+DV+
Sbjct: 561 DDTFIETEGGGKFGSNISHLGHYSDIAEKSMERFVSVLSSFNYSSGSRASGLRAPLRDVQ 620
Query: 641 NTCTVRSPVAVDFSQFEYVP-KSRKSDLASRRL 672
N RS V +D ++F YVP K R + + +RL
Sbjct: 621 NIHPTRSTVGIDVNKFAYVPNKMRTASASQKRL 653
>gi|449525676|ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis
sativus]
Length = 685
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/694 (59%), Positives = 495/694 (71%), Gaps = 35/694 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIK+LEG VA+DTYSWLHKGA CS+ELC GLPTS+HIDYCM
Sbjct: 1 MGIQGLLPLLKSIMLPIHIKDLEGSSVAIDTYSWLHKGAFCCSKELCNGLPTSKHIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HR+NLLRHYGVKP+L+FDGG LPMK EQE KRAR+RKENLARA E E GNS+A+YE YQ
Sbjct: 61 HRINLLRHYGVKPVLVFDGGFLPMKNEQEIKRARTRKENLARATEHEMNGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+PSIAHELIQVLK++NVSY+VAPYEADAQMTFLA+S QV+AV+TEDSDLIPFGC
Sbjct: 121 KAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF+ MLQKNKDL+F GFTKQM+LEMCILSGCDYL SLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI KF SY+KVI+HL+YSTV+VP YEESF KA+LTFQHQRVYDP TEDIVHLS ISD+
Sbjct: 241 ALIXKFLSYEKVIRHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDIVHLSQISDH 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERK 352
I +DLDFL AKGIA GD+DP T LPFQE N+ +V + LK F +K
Sbjct: 301 IEDDLDFLGPSIPQHIAKGIAEGDIDPCTNLPFQEQDTNTGVVHERPYKLKEFNAGCIKK 360
Query: 353 KLDLPVQKNLLTK-----------KFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
KLDLPVQKN+LTK KFT P+ S + S S+S E E SC
Sbjct: 361 KLDLPVQKNVLTKYFCFASLEAKRKFTAPKQSADQPSLRYDFSISADEPLGPED----SC 416
Query: 402 QSSSRMELETVGNFPHNSSEKNCFASEVP-EFSASPSREMENE--RNAEHTSLPQFCRSI 458
+S + E V F +N A P S++ S++M N R AEH L Q +SI
Sbjct: 417 PPASTHQCENVEGFLVTYPVRNDNADGFPLSDSSNRSKDMVNNKTREAEHILLQQHTQSI 476
Query: 459 RNPCPALRKEHENKNCTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVEND 518
PC L K + + +D+ K R +N++VI+RSSYF HK + D+ E K +KL + +
Sbjct: 477 HKPCATLHKRPDCEKFSDTAGEKVRKDNKRVIIRSSYFKHKPESNDEHE-KNQKLADQKN 535
Query: 519 AAIDMSENTGLQSAHFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDP 578
AA+ + E T + A F + T KRK S +S+ D + +K + + P
Sbjct: 536 AAVAIHEITTPEVASFISNSCDSTITKRKASPNESIQMDNVKTKHLCKDT-------VQP 588
Query: 579 NLDKTI-ATETDEAKFGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLK 637
+ D+T+ T+T+E KFG+NISHL YS+IAEKSMERFVSVIS +R SGSRASGLRAPLK
Sbjct: 589 DHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLK 648
Query: 638 DVRNTCTVRSPVAVDFSQFEYVPKSRKSDLASRR 671
DV+N+ T RS A+DFSQF YVP + L R+
Sbjct: 649 DVQNSKTNRSTSAMDFSQFAYVPNKHRDPLPFRK 682
>gi|449459386|ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 685
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/694 (59%), Positives = 495/694 (71%), Gaps = 35/694 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIK+LEG VA+DTYSWLHKGA CS+ELC GLPTS+HIDYCM
Sbjct: 1 MGIQGLLPLLKSIMLPIHIKDLEGSSVAIDTYSWLHKGAFCCSKELCNGLPTSKHIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HR+NLLRHYGVKP+L+FDGG LPMK EQE KRAR+RKENLARA E E GNS+A+YE YQ
Sbjct: 61 HRINLLRHYGVKPVLVFDGGFLPMKNEQEIKRARTRKENLARATEHEMNGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+PSIAHELIQVLK++NVSY+VAPYEADAQMTFLA+S QV+AV+TEDSDLIPFGC
Sbjct: 121 KAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF+ MLQKNKDL+F GFTKQM+LEMCILSGCDYL SLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI KF SY+KVI+HL+YSTV+VP YEESF KA+LTFQHQRVYDP TEDIVHLS ISD+
Sbjct: 241 ALIKKFLSYEKVIRHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDIVHLSQISDH 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERK 352
I +DLDFL AKGIA GD+DP T LPFQE N+ +V + LK F +K
Sbjct: 301 IEDDLDFLGPSIPQHIAKGIAEGDIDPCTNLPFQEQDTNTGVVHERPYKLKEFNAGCIKK 360
Query: 353 KLDLPVQKNLLTK-----------KFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
KLDLPVQKN+LTK KFT P+ S + S S+S E E SC
Sbjct: 361 KLDLPVQKNVLTKYFCFASLEAKRKFTAPKQSADQPSLRYDFSISADEPLGPED----SC 416
Query: 402 QSSSRMELETVGNFPHNSSEKNCFASEVP-EFSASPSREMENE--RNAEHTSLPQFCRSI 458
+S + E V F +N A P S++ S++M N R AEH L Q +SI
Sbjct: 417 PPASTHQCENVEGFLVTYPVRNDNADGFPLSDSSNRSKDMVNNKTREAEHILLQQHTQSI 476
Query: 459 RNPCPALRKEHENKNCTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVEND 518
PC L K + + +D+ K R +N++VI+RSSYF HK + D+ E K +KL + +
Sbjct: 477 HKPCATLHKRPDCEKFSDTAGEKVRKDNKRVIIRSSYFKHKPESNDEHE-KNQKLADQKN 535
Query: 519 AAIDMSENTGLQSAHFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDP 578
AA+ + E T + A F + T KRK S +S+ D + +K + + P
Sbjct: 536 AAVAIHEITTPEVASFISNSCDSTITKRKASPNESIQMDNVKTKHLCKDT-------VQP 588
Query: 579 NLDKTI-ATETDEAKFGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLK 637
+ D+T+ T+T+E KFG+NISHL YS+IAEKSMERFVSVIS +R SGSRASGLRAPLK
Sbjct: 589 DHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLK 648
Query: 638 DVRNTCTVRSPVAVDFSQFEYVPKSRKSDLASRR 671
DV+N+ T RS A+DFSQF YVP + L R+
Sbjct: 649 DVQNSKTNRSTSAMDFSQFAYVPNKHRDPLPFRK 682
>gi|357519191|ref|XP_003629884.1| Exonuclease [Medicago truncatula]
gi|355523906|gb|AET04360.1| Exonuclease [Medicago truncatula]
Length = 791
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/741 (54%), Positives = 493/741 (66%), Gaps = 81/741 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSIMIPIHIK+ GC VA+DTYSWLHKGALSCS +LCKG+PT+RHI+YCM
Sbjct: 1 MGIHGLLPLLKSIMIPIHIKDFHGCSVAIDTYSWLHKGALSCSTDLCKGIPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRHYGVKPIL+FDGGLLPMK +QENKRARSRKENL RA+E E+ GNS+A+YE YQ
Sbjct: 61 HRVNLLRHYGVKPILVFDGGLLPMKGDQENKRARSRKENLERAVEHEANGNSTAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISP IA ELIQVLKQ+NV Y+VAPYEADAQMTFLA+SKQV+AVITEDSDLIPFGC
Sbjct: 121 KAVDISPQIARELIQVLKQENVQYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGV+FQ SMLQKNK+L+F GF KQMLLEMCILSGCDYLQSLPGMGLK+AH
Sbjct: 181 RIIFKMDKFGQGVQFQYSMLQKNKELNFEGFNKQMLLEMCILSGCDYLQSLPGMGLKKAH 240
Query: 241 ALISKFKSYDK------------------VIKHLKYSTVSVPPFYEESFGKAVLTFQHQR 282
A I +FKSYDK V+KHLKY+ VSVPPFYEESF KA+LTFQ+QR
Sbjct: 241 ASIKRFKSYDKVRMEDTVDMHDYSRPKKRVLKHLKYNGVSVPPFYEESFRKAILTFQYQR 300
Query: 283 VYDPKTEDIVHLSCISDNIGNDLDFL------------------AKGIAIGDLDPFTQLP 324
VYDP +E+IVHL+ I ++IG++LDFL +GIA GDLDP T++P
Sbjct: 301 VYDPVSENIVHLANIPEDIGDELDFLDLIQNNTLTRYTPLPKDIGQGIAEGDLDPITKMP 360
Query: 325 FQEVSDNSHLVVGQNSHLKNFKPESERKKLDLPVQKNLLT----------------KKFT 368
F+ + L + S K E +K++DLPVQKNLLT ++F
Sbjct: 361 FEGDKFAARLEIAGTSQFKTLNSERVKKRIDLPVQKNLLTNNFSLATKGFASLEAKREFK 420
Query: 369 TPRISPN--HFSPEETSSLSPGEHHTAEASCDISCQS-SSRMELETV-GNFPHNSSEKNC 424
PR SP + S +SS++ EH T EA+ + S +S ++ E + P NS +N
Sbjct: 421 APRTSPTTANQSTLISSSVNSLEHQTLEAAARETVNSGASTVDTENCDSSLPPNSYIENS 480
Query: 425 FASEVPEFSASPSREMENERNAEHTSLPQFCRSIRNPCPALRKEHENKNCTDSVVGKGRT 484
F ++ E SP+ E + + +HT L Q + I PC L KEHE N D K +
Sbjct: 481 FPTKTLELMESPNHG-EKKGSPDHTILRQPRQPIHKPCLGLHKEHELTNVEDKAEEKTKE 539
Query: 485 ENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSENTGLQSAHFDYSYLKGTAI 544
RKVIVRS YF KQV K+ + KQE+L + ID +N G+ +LK +
Sbjct: 540 TKRKVIVRSRYFQQKQVEKNACDVKQEQL--SSCIVIDERKN-GISGGDLCNKHLKNDDL 596
Query: 545 KRKTSLIDSVHTDKMGSKLMRTNASLHNNGY-------------------SDPNLDKTIA 585
K+K D++ ++ + ++ M +S H+N SD N+
Sbjct: 597 KKKVYPNDTIQSENLQARKMNPTSSTHDNDSSLMAIGLLLIMQSHIVYCCSDHNVGGPFK 656
Query: 586 TET-DEAKFGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVRNTCT 644
+ E KFG NISHLG YS+I+EKS+ERF SVIS Y+ TSGSR SGLRAPLKDVRNT
Sbjct: 657 ENSAQEEKFGTNISHLGHYSQISEKSLERFASVISAYKYTSGSRVSGLRAPLKDVRNTHN 716
Query: 645 VRSPVAVDFSQFEYVPKSRKS 665
R P AVD SQ+ YVPK K+
Sbjct: 717 KR-PAAVDLSQYAYVPKPTKT 736
>gi|356528364|ref|XP_003532774.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 743
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/742 (54%), Positives = 491/742 (66%), Gaps = 83/742 (11%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQG LPLLKSIM+P+HIK+L+GC VAVDTYSWLHKGALSCS ELCKG+PT+RHI+YCM
Sbjct: 1 MGIQGFLPLLKSIMVPVHIKDLKGCSVAVDTYSWLHKGALSCSTELCKGMPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPIL+FDGGLLPMK EQENKRAR+RK+NLARA+E ES+GNS+A+YE YQ
Sbjct: 61 HRVNLLRHFGVKPILVFDGGLLPMKSEQENKRARARKDNLARAVEHESDGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISP IA ELIQVLKQ+N+ YIVAPYEADAQMTFLA+S QV+AVITEDSDLIPFGC
Sbjct: 121 KAVDISPQIACELIQVLKQENLQYIVAPYEADAQMTFLAISGQVDAVITEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGV+FQ SMLQKNK+LSF GF +QMLLEMCILSGCDYLQSLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGQGVQFQYSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
A I KF+SYDKV+KHL+YS VSVPPFYEESF KA+ TFQ+QRVYDP E+IVHLS I D+
Sbjct: 241 ASIKKFRSYDKVLKHLRYSGVSVPPFYEESFKKAIFTFQYQRVYDPINENIVHLSNIPDD 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERK 352
IG++LDFL A+ IA GDLDP T++PF+ + + L + S K ES +K
Sbjct: 301 IGDELDFLGPSMPKDIAQRIAKGDLDPITKMPFEGENLTARLAIAGTSQFKTHHSESAKK 360
Query: 353 KLDLPVQKNLLTK-----------KFTTPRISPNH-----------FSPEETSSLSPGEH 390
K+DLPVQKNLLTK KF PR+SP+ E+ S+ P
Sbjct: 361 KIDLPVQKNLLTKYFCFASLEAKRKFRAPRVSPSAANETKNSTASVIDSEDWGSVPPPNS 420
Query: 391 HT-----------AEASCDISCQSSSRMELE-TVGNFPHNSSEKNCFA-------SEVPE 431
H E+ C +S + E TV P K C + V +
Sbjct: 421 HVEYGSATNISEFTESPCHMSMVGEEKKSPEHTVLRQPRQPIHKPCLGLHKDHEHTNVED 480
Query: 432 FSASPSREMENE---RNA--EHTSLPQFCRSIRNPCPA-----------------LRKEH 469
+RE + R+A +H + + + C + +
Sbjct: 481 TVEGKTREATQKVIVRSAYFQHKQVEKNVYDEKQDCLSSGVVIDKRKNALSDSDFCNNDF 540
Query: 470 ENKN--CTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKL---VVENDAAIDMS 524
+NK+ D + GK R RKVIVRS+YF HKQV K+ +NKQ+ L +V ++ I +S
Sbjct: 541 KNKDQVVHDLLEGKSREGTRKVIVRSAYFQHKQVEKNVCDNKQDCLSSGIVIDERKIAIS 600
Query: 525 ENTGLQSAHFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDPNLDKTI 584
+ + + LK +KRK S D++ + + + M ++ HNNG D N+D
Sbjct: 601 D------SDLCNNLLKNKDLKRKISPNDNIQNENLQPRQMHRSSPPHNNGCCDHNVDGPF 654
Query: 585 A-TETDEAKFGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVRNTC 643
+E FG ISHLG YSEIAEKSMERFVSV+S +RCTSG+R SGLRAPLKDVRNT
Sbjct: 655 TENNAEEENFGTKISHLGQYSEIAEKSMERFVSVMSSFRCTSGTRVSGLRAPLKDVRNTS 714
Query: 644 TVRSPVAVDFSQFEYVPKSRKS 665
R VDF Q+ YVPK K+
Sbjct: 715 GNRPKKTVDFGQYAYVPKQTKT 736
>gi|297845884|ref|XP_002890823.1| hypothetical protein ARALYDRAFT_473168 [Arabidopsis lyrata subsp.
lyrata]
gi|297336665|gb|EFH67082.1| hypothetical protein ARALYDRAFT_473168 [Arabidopsis lyrata subsp.
lyrata]
Length = 744
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/755 (54%), Positives = 485/755 (64%), Gaps = 94/755 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIKELEGC VAVDTYSWLHKGALSCSRELCKGLPT RHI YCM
Sbjct: 1 MGIQGLLPLLKSIMVPIHIKELEGCIVAVDTYSWLHKGALSCSRELCKGLPTKRHIQYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPI++FDGG LPMK+EQENKRARSRKENLARA+E E+ GNSSA+YE Y
Sbjct: 61 HRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECYS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIAHELIQVL+Q+NV Y+VAPYEADAQMTFLA++KQV+A+ITEDSDLIPFGC
Sbjct: 121 KAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMTFLAITKQVDAIITEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFG GVEFQ S L KNKDLS GF+ QMLLEMCILSGCDYLQSLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI+KFKSYD+VIKHLKYSTVSVPP YEESF +A+LTF+HQRVYDP TEDI+HLS ISD
Sbjct: 241 ALITKFKSYDRVIKHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNTEDIIHLSDISDY 300
Query: 301 IGNDLDF----------------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKN 344
+G D DF +AKGIA+G LDPFTQLPFQ S L V S K+
Sbjct: 301 LGEDSDFENLIDFLTSFTSMPQHIAKGIALGQLDPFTQLPFQAESVTPILAVDVISRPKS 360
Query: 345 FKPESERKKLDLPVQKNLLTK-----------KFTTPRISPNHFSPEETSSLSPGEHHTA 393
FKPE+ +KKLDLPVQKNLLTK KF PRISP +P + S +P ++ T
Sbjct: 361 FKPETVKKKLDLPVQKNLLTKYFCFASVEAKRKFKAPRISPMSLTPTDESPSTPEDNAT- 419
Query: 394 EASCDISCQSSSRMELETVGNFPHNSSEKNCFASEVPEFSASPSRE-ME----------N 442
DI SS +T P S +N S+V E SP + ME
Sbjct: 420 ----DIDALSS-----QTTNESPVYSLGENACVSKVAEKRESPDDDAMEKNHKHLHHKYG 470
Query: 443 ERNAEHT---SLPQFCRS-----------IRNPCPALR------KEHENKNCTDSVVGKG 482
ER E SL RS ++ P P L + K+ +
Sbjct: 471 ERKVERPKTDSLKVIVRSKYFKQKQEDKGLKQPIPCLNDCSVIGQRKAVKSVINMSSASK 530
Query: 483 RTENRKVIVRSSYFL-HKQVNKDDQENKQEKLVVENDAA------------IDMSENTGL 529
R EN + I +S L H ++ D ++ K+ N+ A ID E
Sbjct: 531 REENHRAIATTSPCLHHDRIYNDHEDAKEASFSAMNEVAERTTDIHKINHQIDEEEQNPS 590
Query: 530 QSAHFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGY---------SDPNL 580
+S + I + I+S H G + + + +L +DP L
Sbjct: 591 VEIPSAFSTPENV-IPLSSIAINSFHGAATGKRKLDLDENLQKENQNSKHMRMDETDPVL 649
Query: 581 DKTIATETDEA-KFGANISHLGSYSEIAEKSMERFVSVISKYRCT-SGSRASGLRAPLKD 638
+ ETD+ KFG+NISH+G YSEIAEKS+ERFVS IS ++ + +GSRASGLRAPLKD
Sbjct: 650 NAETPVETDDVEKFGSNISHIGHYSEIAEKSVERFVSAISSFKYSGTGSRASGLRAPLKD 709
Query: 639 VRNTCTVRS-PVAVDFSQFEYVPKSRKSDLASRRL 672
+RNTC + + D S+F Y +R SRRL
Sbjct: 710 IRNTCPSKGFSLKPDISKFGYASSNRHMVTKSRRL 744
>gi|145324070|ref|NP_001077624.1| exonuclease 1 [Arabidopsis thaliana]
gi|166232400|sp|Q8L6Z7.2|EXO1_ARATH RecName: Full=Exonuclease 1
gi|332192991|gb|AEE31112.1| exonuclease 1 [Arabidopsis thaliana]
Length = 735
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/745 (54%), Positives = 478/745 (64%), Gaps = 83/745 (11%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIKELEGC VAVDTYSWLHKGALSCSRELCKGLPT RHI YCM
Sbjct: 1 MGIQGLLPLLKSIMVPIHIKELEGCIVAVDTYSWLHKGALSCSRELCKGLPTKRHIQYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPI++FDGG LPMK+EQENKRARSRKENLARA+E E+ GNSSA+YE Y
Sbjct: 61 HRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECYS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIAHELIQVL+Q+NV Y+VAPYEADAQM FLA++KQV+A+ITEDSDLIPFGC
Sbjct: 121 KAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGCL 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFG GVEFQ S L KNKDLS GF+ QMLLEMCILSGCDYLQSLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI+KFKSYD+VIKHLKYSTVSVPP YEESF +A+LTF+HQRVYDP EDI+HL ISDN
Sbjct: 241 ALITKFKSYDRVIKHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDN 300
Query: 301 IGNDLDF--------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERK 352
+G D DF +AKGIA+G LDPFTQLPFQ S L V S K+FKPE+ +K
Sbjct: 301 LGEDSDFVGPSMPQDIAKGIALGQLDPFTQLPFQAESVTPKLAVDDISRPKSFKPETVKK 360
Query: 353 KLDLPVQKNLLTK-----------KFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
KLDLPVQKNLLTK KF PRISP +P + S P ++ + D+
Sbjct: 361 KLDLPVQKNLLTKYFCFASVEAKRKFKAPRISPMSLTPTDESPSIPDDN-----TPDLDA 415
Query: 402 QSSSRMELETVGNFPHNSSEKNCFASEVPEFSASPSREM--ENERNAEHT---------- 449
SS +T P S +N SEV E SP + N ++ H
Sbjct: 416 LSS-----QTTNESPVYSLGENPCVSEVAEKRDSPDDDAVERNHKDLHHKYCEREVDRPK 470
Query: 450 --SLPQFCRS-----------------IRNPCPALRKEHENKNCTDSVVGKGRTENRKVI 490
SL RS N C + + K + R E+ + I
Sbjct: 471 SDSLKVIVRSKYFKQKQEDKSLKQSIPCLNDCSVIGQRKAVKTVINMSSASKREESHRAI 530
Query: 491 VRSSYFLHKQVNKDDQENKQEKLVVENDAA--------IDMSENTGLQSAHFDYSYLKGT 542
S H ++ D ++ K+ N+ A I+ N Q+ + T
Sbjct: 531 ATSPCLHHDRIYNDHEDAKEASFSAMNEVAERTINTHKINHQINEEEQNPSVEIPSAFST 590
Query: 543 ---AIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGY---------SDPNLDKTIATETDE 590
I + IDS H G + + ++ +LH +D L+ ETD+
Sbjct: 591 PENVIPLSSIAIDSCHGVATGKRKLDSDENLHKENLKSKHMRMDETDTALNAETPLETDD 650
Query: 591 A-KFGANISHLGSYSEIAEKSMERFVSVISKYRCT-SGSRASGLRAPLKDVRNTCTVRS- 647
KFG+NISH+G YSEIAEKS+ERFVS IS ++ + +GSRASGLRAPLKD+RNTC +
Sbjct: 651 VEKFGSNISHIGHYSEIAEKSVERFVSAISSFKYSGTGSRASGLRAPLKDIRNTCPSKGL 710
Query: 648 PVAVDFSQFEYVPKSRKSDLASRRL 672
+ D S+F Y +R SRR+
Sbjct: 711 SLKPDISKFGYASSNRHMVTKSRRM 735
>gi|297740589|emb|CBI30771.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/397 (75%), Positives = 339/397 (85%), Gaps = 18/397 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+P HIK+L+GC VAVDTYSWLHKGALSCS++LCK +PTSRHIDYCM
Sbjct: 1 MGIQGLLPLLKSIMVPFHIKDLKGCSVAVDTYSWLHKGALSCSKQLCKSIPTSRHIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRHYGV+PIL+FDGGLLPMKIEQENKRAR RKENLARAIE ES GNS+A+YE YQ
Sbjct: 61 HRVNLLRHYGVEPILVFDGGLLPMKIEQENKRARVRKENLARAIEHESNGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIA ELIQVLKQ+NVSYIVAPYEADAQMTFLAVS+QV+A+ITEDSD+IPFGC
Sbjct: 121 KAVDISPSIARELIQVLKQENVSYIVAPYEADAQMTFLAVSQQVDAIITEDSDMIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF+ SM+Q+NK+LSF GFTKQM+LEMCILSGCDYLQSLPGMGLK+AH
Sbjct: 181 RIIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEMCILSGCDYLQSLPGMGLKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI KFKSYDKVIKHL+Y+T SVPP YEESF KA+LTFQHQRVYDP EDIVHLS +SDN
Sbjct: 241 ALIKKFKSYDKVIKHLRYATGSVPPLYEESFKKAMLTFQHQRVYDPTIEDIVHLSVLSDN 300
Query: 301 IGNDLDF-------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERKK 353
+ L +AKGIA GDLDPFT++PFQ + + L++ L++FKPESERKK
Sbjct: 301 VDRILTIITLISQDIAKGIATGDLDPFTKMPFQGQNASDGLLLDGTYQLESFKPESERKK 360
Query: 354 LDLPVQKNLLTK-----------KFTTPRISPNHFSP 379
++LP QKNLLT KF PRI+PN +P
Sbjct: 361 IELPAQKNLLTNYFCFTSLEAKGKFRAPRITPNDSNP 397
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
Query: 561 SKLMRTNASLHNNGYSDPNLDKTIATETDEAKFGANISHLGSYSEIAEKSMERFVSVISK 620
+K MRTNASL N DP++D T KFG+NISHLG YS+IAEKSMERFVSV+S
Sbjct: 430 AKYMRTNASLANRSNCDPDIDDTFIETEGGGKFGSNISHLGHYSDIAEKSMERFVSVLSS 489
Query: 621 YRCTSGSRASGLRAPLKDVRNTCTVRSPVAVDFSQFEYVP-KSRKSDLASRRL 672
+ +SGSRASGLRAPL+DV+N RS V +D ++F YVP K R + + +RL
Sbjct: 490 FNYSSGSRASGLRAPLRDVQNIHPTRSTVGIDVNKFAYVPNKMRTASASQKRL 542
>gi|357131085|ref|XP_003567173.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 893
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 347/706 (49%), Positives = 440/706 (62%), Gaps = 71/706 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM PI +++L G VAVDTYSWLHKGALSCS LCKG+PT+RHI+YCM
Sbjct: 1 MGIQGLLPQLKSIMAPIGVEDLRGQTVAVDTYSWLHKGALSCSDRLCKGIPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPIL+FDGG LPMK EQE KRARSRKENL RA E E+ GNS ++E YQ
Sbjct: 61 HRVNLLRHHGVKPILVFDGGFLPMKSEQEIKRARSRKENLERAREHEAAGNSRGAFESYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P IA ELIQVLKQ+NVSYIVAPYEADAQMTFL+V+K V+AVITEDSDLIPFGCS
Sbjct: 121 KAVDITPRIASELIQVLKQENVSYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEFQ L++N++L F GFTKQMLLEMCILSGCDYL SLPGMG+KRAH
Sbjct: 181 RIIFKMDKFGQGVEFQIMRLEQNRELDFNGFTKQMLLEMCILSGCDYLPSLPGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI K KS++KVIKHL+YS+VSVPP YEE+F KA+ FQ QRVYDP TEDIVHLS I +
Sbjct: 241 ALIQKLKSHEKVIKHLRYSSVSVPPQYEENFKKAIRAFQFQRVYDPATEDIVHLSGIPHD 300
Query: 301 IGNDLDFLA--------KGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLK-NFKPESER 351
D DFL KGIA+GD+DP ++ PF+ S V + ++ + P + +
Sbjct: 301 FSED-DFLGPWLPQAVVKGIALGDIDPLSKEPFEAKIQCSASAVDKVYPIRESIIPSNGK 359
Query: 352 KKLDLPVQKNLLT-----------KKFTTPRISPNHFSPEETSSLSPGEHHTA------- 393
K+LDLPVQKN+LT +KF P+++P +S SP +A
Sbjct: 360 KRLDLPVQKNILTNYFCLASLEAKRKFRAPKVTPKQQLLNGSSLPSPLAEDSATSDSIED 419
Query: 394 --------------------EASCDISCQSSSRMELETVGNFPHN---SSEKNCFASEV- 429
E D S +S +FP N S+ +C + +V
Sbjct: 420 TSLPTNNIQASQSSSEHFSSEPPKDDSINASQHSTEPFSCDFPRNDSASASPHCSSYDVG 479
Query: 430 --PEFSASPSREMENERNAEHTSLP------QFCRSIRNPCPALRKEHENKNCTDSVVGK 481
P F + E E N + ++P + I +P ++
Sbjct: 480 SDPPFEDPYIEDREVEINYCNVAIPGSPLLERTLPGIADPLLLSHDMEPSRPVPHYAESN 539
Query: 482 GRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSENTGLQSAHFDYSYLKG 541
NR + VRSSYF + +K N+ E + + D + TG + D G
Sbjct: 540 VVPTNRTITVRSSYF---RKDKRVYTNQGEDQLDDED-----NRETGTCTLSGDQLRNPG 591
Query: 542 TAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDPNLDKTIATETDEAKFGANISHLG 601
+KR+ D + + + T+ S + D + I+T + E +FG N++H+
Sbjct: 592 GIVKRRKHW-DPQNFEDEALQPTSTHESAPVDEDCDADSPGGISTNS-EGRFGCNVAHVN 649
Query: 602 SYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVRNTCTVRS 647
+YS IAEKSM++F ++IS ++ +GSRASGLRAPLKDV+NT +VRS
Sbjct: 650 TYSGIAEKSMDKFAALISSFK-NAGSRASGLRAPLKDVKNTLSVRS 694
>gi|356512555|ref|XP_003524984.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 481
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/538 (60%), Positives = 377/538 (70%), Gaps = 71/538 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQG LPLLKSIM+PIHIK+L+GC VAVDTYSWLHKGALSCS ELCKG+PT+RHI+YCM
Sbjct: 1 MGIQGFLPLLKSIMVPIHIKDLKGCSVAVDTYSWLHKGALSCSTELCKGMPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPIL+FDGGLLPMK EQENKRAR+RK+NLARA+E ES+GNS+A+YE YQ
Sbjct: 61 HRVNLLRHFGVKPILVFDGGLLPMKSEQENKRARARKDNLARAVEHESDGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISP IA ELIQVLKQ+N+ YIVAPYEADAQMTFLA+S QV+AVITEDSDLIPFGC
Sbjct: 121 KAVDISPQIACELIQVLKQENLQYIVAPYEADAQMTFLAISGQVDAVITEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGV+FQ SMLQKNK+LSF GF +QMLLEMCILSGCDYLQSL GMGLKRAH
Sbjct: 181 RIIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLSGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
A I KF+SYDKV+KHL+YS VSVPPFYEESF KA+LTFQ+QRVYDP E+IVHLS ISD+
Sbjct: 241 ASIKKFRSYDKVLKHLRYSGVSVPPFYEESFKKAILTFQYQRVYDPINENIVHLSNISDD 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQ--NSHLKNFKPESE 350
IG++LDFL A+ IA GDLDP T++PF+ + L++ Q NS L
Sbjct: 301 IGDELDFLGPTMPKDIAQRIAKGDLDPITKMPFEVL-----LLLKQKGNSELLGCHLLLL 355
Query: 351 RKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSRMELE 410
K Q+ LL H E S+ P H +S
Sbjct: 356 MK------QRTLL------------HIDSENWGSVPPPNIHIGYSS-------------- 383
Query: 411 TVGNFPHNSSEKNCFASEVPEFSASPSREMENERNAEHTSLPQFCRSIRNPCPALRKEHE 470
A+ EF+ SP E +++ EHT L + + I PC L H
Sbjct: 384 ---------------ATNNSEFTESPCHE---KKSPEHTVLRKPRQPIHKPCLGL---HG 422
Query: 471 NKNCTDSVVGKGRTE-NRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSENT 527
+ N D+ GK R E RKV VRS+YF HKQV K+ KQ+ L + AID +N
Sbjct: 423 HTNVQDTAEGKTREEATRKVTVRSAYFQHKQVEKNVYGEKQDCL--SSGIAIDERKNA 478
>gi|255562588|ref|XP_002522300.1| exonuclease, putative [Ricinus communis]
gi|223538553|gb|EEF40158.1| exonuclease, putative [Ricinus communis]
Length = 629
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 348/691 (50%), Positives = 431/691 (62%), Gaps = 135/691 (19%)
Query: 42 CSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLA 101
C + C HI YCMHRVNLLRHYGVKPIL+FDGGLLPMK EQENKRARSRKENL+
Sbjct: 12 CEKVDCFSHVLRMHIQYCMHRVNLLRHYGVKPILVFDGGLLPMKSEQENKRARSRKENLS 71
Query: 102 RAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVS 161
RAIE E+ GNS+A+YE YQKAVDISPSIAHELIQ LKQ+NVSY+VAPYEADAQMTFLA+S
Sbjct: 72 RAIEHEANGNSAAAYECYQKAVDISPSIAHELIQALKQENVSYVVAPYEADAQMTFLAIS 131
Query: 162 KQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
KQV+AVITEDSDLIPFGC RI+FKMDK+GQG+EFQ S LQ NK+LSF GFT +M+L+MCI
Sbjct: 132 KQVDAVITEDSDLIPFGCPRIVFKMDKYGQGIEFQYSRLQLNKELSFSGFTHEMILQMCI 191
Query: 222 LSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQ 281
LSGCDYLQSLPGMGLKRAHALI+KFKSYDKVIKHLKYST+SVPP YEESF KA+LTFQHQ
Sbjct: 192 LSGCDYLQSLPGMGLKRAHALITKFKSYDKVIKHLKYSTISVPPLYEESFRKAILTFQHQ 251
Query: 282 RVYDPKTEDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSH 341
RVYDP EDI+HLS ++DN+G F L +
Sbjct: 252 RVYDPIAEDIIHLSDLADNLG-----------------FASLEAK--------------- 279
Query: 342 LKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAE-ASCDIS 400
+NF+ PR SP + SP + SSLSP + E AS ++
Sbjct: 280 -RNFR----------------------APRTSPINPSPVDKSSLSPNVNCNLEVASSNMD 316
Query: 401 CQSSSRMELETVGNFPHNSSEKNCFASEVPEFSASPSREM-ENERNAEHTSLPQFCRSIR 459
C +++ ++ + + + + ++ FA+E E SASP+ M ER++ H L + S
Sbjct: 317 CSAATPLDYGNMKSTMLDDTVESGFAAEDLELSASPTPGMIGEERSSVHNLLQELGDSTH 376
Query: 460 NPCPALRKEHENKNCTDSVV--GKGRTENRKVIV-------------------------- 491
P AL KE ++K+ T V + + EN+KVIV
Sbjct: 377 KPFQALLKECDSKSVTTRSVLQDERKAENKKVIVQSSYFEPTPINKFDEDNEKEKLLVKN 436
Query: 492 --------------------------RSSYFLHKQVNKDDQENKQEKLVVENDAAI--DM 523
RSSYF H VNK+D++N+ E+L+VE+DAA+ DM
Sbjct: 437 APTDPCDGSILKSAYKIRTADNKITIRSSYFQHNSVNKNDKKNEHERLLVESDAAMGSDM 496
Query: 524 SENTGLQSAHFDYSYLKGTAIKRKTSLIDSVHTDKMG--SKLMRTNASLHNNGYSDPNLD 581
+E+ L A + + + +KRKTS +V + M +K MRT+ASL NG
Sbjct: 497 NEDVILDIASSENNSI---GMKRKTSQNGTVQRENMNMRTKHMRTDASLSENG------- 546
Query: 582 KTIATETDEAKFGANISHLGSYSEIAEKSMERFV-SVISKYRCTSGSRASGLRAPLKDVR 640
KFG+NISHL YS+IAEKSMERFV + S +SGSRASGLRAPL+D++
Sbjct: 547 ---------GKFGSNISHLSHYSDIAEKSMERFVSVISSFKFSSSGSRASGLRAPLRDIQ 597
Query: 641 NTCTVRSPVAVDFSQFEYVPKSRKSDLASRR 671
NT T RS V VDFS+F Y PK +K+ +A RR
Sbjct: 598 NTSTSRSNVDVDFSRFAYTPKDKKTGVALRR 628
>gi|297597717|ref|NP_001044421.2| Os01g0777300 [Oryza sativa Japonica Group]
gi|75114038|sp|Q60GC1.1|EXO1_ORYSJ RecName: Full=Exonuclease 1; AltName: Full=OsEXO-1
gi|54111120|dbj|BAD60834.1| exonuclease-1 [Oryza sativa Japonica Group]
gi|255673742|dbj|BAF06335.2| Os01g0777300 [Oryza sativa Japonica Group]
Length = 836
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 352/715 (49%), Positives = 435/715 (60%), Gaps = 86/715 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM PI ++ L+G VAVDTYSWLHKGALSC LCKGLPT+RHI+YCM
Sbjct: 1 MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVN+LRH+GVKPIL+FDGG LPMK +QE KR RSRKENL RA E ES GNS A++E YQ
Sbjct: 61 HRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P IA ELIQVLKQ+ V YIVAPYEADAQMTFL+V+K V+AVITEDSDLIPFGCS
Sbjct: 121 KAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF + LQ+ ++L GFT QMLLEMCILSGCDYL SLPGMG+KRAH
Sbjct: 181 RIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI K K ++KVIKHL+YS VSVPP YEE+F KA+ FQ QRVYDP TEDIVHLS I
Sbjct: 241 ALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLSGIPHG 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHL--KNFKPESE 350
DLDFL AKGIA G++DP T+ PF+ +++S L + HL ++ P +
Sbjct: 301 SSEDLDFLGPWLPQTVAKGIAQGNIDPITKEPFEGKTESSALAFDK-VHLNRESSAPSNG 359
Query: 351 RKKLDLPVQKNLLT-----------KKFTTPRISPNHF-------SPEETSSLSP----- 387
+KKLDLPVQ+N+LT +KF P+++P SP S +P
Sbjct: 360 KKKLDLPVQRNVLTNYFCLASLEAKRKFRAPKVTPKQQVLNGSLPSPRIEDSGTPDLIED 419
Query: 388 --------------GEHHTAEASCDISCQSSSRMELETVG-NFPHNSSEKNCFASEVPEF 432
EH ++ D S ++S+ E V + P + S AS P+
Sbjct: 420 TSLPSNNIQVYQCSSEHFSSGTPLDDSINTASQCSSERVRCDIPRDDS-----ASVSPQC 474
Query: 433 S----ASPSREMENERNAEHTSLPQFCRSIRNPC--------PALRKEHENKNCTDSVVG 480
S + P+ + + E N + FC P P + + + T+
Sbjct: 475 SHDIGSDPAEDPDIEGNKVKVN---FCNRSTIPTGSFLEGTLPGISDPFLDSHNTEPSRA 531
Query: 481 KGR--------TENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSENTGLQSA 532
R + NR + VRSSYF K VNK N+ E + D TG +
Sbjct: 532 APRYAEKSNVVSANRNITVRSSYF--KTVNKRVCTNQGEDECHDEDNC-----ETGNYTL 584
Query: 533 HFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDPNLDKTIATETDEAK 592
D G +KR+ D M + + D + I T + E K
Sbjct: 585 PGDQQRSSGGILKRRKFSDPQNFEDGMFQPTSPHESPPVADKGCDSDSHDGINTNS-EGK 643
Query: 593 FGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVRNTCTVRS 647
FG N++H+ YS IAEKSM++F ++IS +R +GSRASGLRAPLKDV+NT VRS
Sbjct: 644 FGCNVAHVNKYSGIAEKSMDKFAALISSFR-YAGSRASGLRAPLKDVKNTLPVRS 697
>gi|242054579|ref|XP_002456435.1| hypothetical protein SORBIDRAFT_03g036255 [Sorghum bicolor]
gi|241928410|gb|EES01555.1| hypothetical protein SORBIDRAFT_03g036255 [Sorghum bicolor]
Length = 823
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 341/716 (47%), Positives = 437/716 (61%), Gaps = 96/716 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM PI +EL G VAVDTYSWLHKGALSC LCKG+PT+RHI+YCM
Sbjct: 1 MGIQGLLPQLKSIMAPISAEELRGQTVAVDTYSWLHKGALSCGDRLCKGIPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVN+LRH+GVKPIL+FDGGLLP+K QE KRARSRKENL RA E E+ GNS A++E YQ
Sbjct: 61 HRVNMLRHFGVKPILVFDGGLLPIKSYQETKRARSRKENLERAREHEAAGNSRAAFECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P IA ELI+VLK++ V YIVAPYEADAQMTFL+V+K V+AVITEDSDLIPFGCS
Sbjct: 121 KAVDITPRIASELIEVLKKEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEFQ + L++N++L F GFT+QMLLEMCILSGCDYL SLPGMG+KRAH
Sbjct: 181 RIIFKMDKFGQGVEFQITRLERNRELDFNGFTRQMLLEMCILSGCDYLPSLPGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI K K ++KVIKHL+Y VSVPP YEE F KA+ F+ QRVYDP TEDI+HLS + +
Sbjct: 241 ALIQKLKCHEKVIKHLRYGAVSVPPQYEEDFKKAIWAFKFQRVYDPATEDIIHLSSVPHD 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKN-FKPESER 351
+ DL+FL AKGIA+G++DP T+ PF+ + S V + + P + R
Sbjct: 301 LIEDLEFLGPWLPQNIAKGIALGNIDPLTKEPFEIKPECSAPAVHKVCPTREPTAPSNGR 360
Query: 352 KKLDLPVQKNLLT-----------KKFTTPRISPNH-------FSPEETSSLSPGE---- 389
KKLDLPVQKN+LT +KF P+++ SP+ S +P
Sbjct: 361 KKLDLPVQKNILTNYFCLASLEAKRKFRAPKVTHKQQILNESLPSPQTQGSDTPDSVEDT 420
Query: 390 ----HHTAEASCDISCQSSSRMELETVGNFPHNSSEKNCFASEVP---EFSASP------ 436
H + C SS + + + SSE+ F+ E P + SP
Sbjct: 421 RLPTDHIQASQCSSEHLSSEPPQNDPISVGSQCSSER--FSCEYPLDDSDNISPQCSSLD 478
Query: 437 -------------SREMENERNAEHTSLPQFCRS------------IRNPCPALRKEHEN 471
R++E + E+T C N P++ +H
Sbjct: 479 GGIDTPCKDTSIIDRKVEADYGNENTISTSSCLVGNLSWTSEPFLLPHNVEPSIPVQHHT 538
Query: 472 KNCTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSENTGLQS 531
K S+V ++N + VRSSYF K VNK ++++ V + + D +G+
Sbjct: 539 K----SIVA---SKNNNITVRSSYF--KTVNKRVCTDQEDYDVGTGNLSGDQLRKSGM-- 587
Query: 532 AHFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDPNLDKTIATETDEA 591
LK +RK S I + + + + ++ S D E
Sbjct: 588 -------LK----RRKLSGIQDFKDETL--QPIHSDDSPPVVDEDQDTDDPDDTNTRTER 634
Query: 592 KFGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVRNTCTVRS 647
+FG N+SH+ +YS IAEKSM++F +++S +R G RASGLRAPLKDV+NT +VRS
Sbjct: 635 RFGCNVSHVNTYSGIAEKSMDKFAALVSSFR-YPGPRASGLRAPLKDVKNTLSVRS 689
>gi|224116484|ref|XP_002317312.1| predicted protein [Populus trichocarpa]
gi|222860377|gb|EEE97924.1| predicted protein [Populus trichocarpa]
Length = 398
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/309 (85%), Positives = 288/309 (93%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIKELEGC VAVDTYSWLHKGALSCS +LCKGLPTSRHI+YCM
Sbjct: 1 MGIQGLLPLLKSIMVPIHIKELEGCSVAVDTYSWLHKGALSCSTQLCKGLPTSRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRHYGVKPIL+FDGGLLPMKIEQENKRAR+RKENL RAIE ES GNS+A+YE YQ
Sbjct: 61 HRVNLLRHYGVKPILVFDGGLLPMKIEQENKRARTRKENLVRAIEHESNGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIAHELIQVL+Q+NVSY+VAPYEADAQMTFL+V KQV+AVITEDSDLIPFGC
Sbjct: 121 KAVDISPSIAHELIQVLRQENVSYVVAPYEADAQMTFLSVCKQVDAVITEDSDLIPFGCH 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDK+GQGVEFQ S LQ+NKD+SF GFT +MLLEMCI SGCDY QSLPGMGLKRAH
Sbjct: 181 RIIFKMDKYGQGVEFQNSRLQQNKDISFVGFTNEMLLEMCIFSGCDYQQSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI+KFKSYDKVIKHL+YSTVSVPP YEESF KA+LTF+HQRVYDP +DIVHLS + DN
Sbjct: 241 ALITKFKSYDKVIKHLRYSTVSVPPLYEESFKKAILTFRHQRVYDPTMKDIVHLSDLPDN 300
Query: 301 IGNDLDFLA 309
IGNDL+FL
Sbjct: 301 IGNDLEFLG 309
>gi|12323539|gb|AAG51751.1|AC068667_30 exonuclease, putative; 92014-93872 [Arabidopsis thaliana]
Length = 317
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/309 (83%), Positives = 282/309 (91%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIKELEGC VAVDTYSWLHKGALSCSRELCKGLPT RHI YCM
Sbjct: 1 MGIQGLLPLLKSIMVPIHIKELEGCIVAVDTYSWLHKGALSCSRELCKGLPTKRHIQYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPI++FDGG LPMK+EQENKRARSRKENLARA+E E+ GNSSA+YE Y
Sbjct: 61 HRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECYS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIAHELIQVL+Q+NV Y+VAPYEADAQM FLA++KQV+A+ITEDSDLIPFGC
Sbjct: 121 KAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGCL 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFG GVEFQ S L KNKDLS GF+ QMLLEMCILSGCDYLQSLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI+KFKSYD+VIKHLKYSTVSVPP YEESF +A+LTF+HQRVYDP EDI+HL ISDN
Sbjct: 241 ALITKFKSYDRVIKHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDN 300
Query: 301 IGNDLDFLA 309
+G D DF+
Sbjct: 301 LGEDSDFVG 309
>gi|148270937|gb|ABQ53635.1| exonuclease [Cucumis melo]
Length = 336
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/309 (82%), Positives = 281/309 (90%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIK+LEG VA+DTYSWLHKGA CS+ELC GLPTS+HIDYCM
Sbjct: 1 MGIQGLLPLLKSIMLPIHIKDLEGSSVAIDTYSWLHKGAFCCSKELCNGLPTSKHIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HR+NLLRHYGVKP+L+FDGGLLPMK EQE KRAR+RKENLARA E E GNS+A+YE YQ
Sbjct: 61 HRINLLRHYGVKPVLVFDGGLLPMKSEQEIKRARTRKENLARATEHEMNGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+PSIAHELIQVLK++NVSY+VAPYEADAQMTFLA+S QV+AV+TEDSDLIPFGC
Sbjct: 121 KAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF+ MLQKNKDL+ GFTKQM+LEMCILSGCDYL SLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGQGVEFRYDMLQKNKDLNLSGFTKQMILEMCILSGCDYLPSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI KF SY+KVI+HL+YSTVSVP YEESF KA+LTFQHQRVYDP TEDIVHLS ISD+
Sbjct: 241 ALIKKFLSYEKVIRHLRYSTVSVPHLYEESFKKAILTFQHQRVYDPITEDIVHLSQISDH 300
Query: 301 IGNDLDFLA 309
I +DLDFL
Sbjct: 301 IEDDLDFLG 309
>gi|164449252|gb|ABY56082.1| exonuclease [Cucumis sativus]
Length = 336
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/309 (81%), Positives = 281/309 (90%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIK+LEG VA+DTYSWLHKGA CS+ELC GLPTS+HIDYCM
Sbjct: 1 MGIQGLLPLLKSIMLPIHIKDLEGSSVAIDTYSWLHKGAFCCSKELCNGLPTSKHIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HR+NLLRHYGVKP+L+FDGG LPMK EQE KRAR+RKENLARA E E GNS+A+YE YQ
Sbjct: 61 HRINLLRHYGVKPVLVFDGGFLPMKNEQEIKRARTRKENLARATEHEMNGNSAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+PSIAHELIQVLK++NVSY+VAPYEADAQMTFLA+S QV+AV+TEDSDLIPFGC
Sbjct: 121 KAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF+ MLQKNKDL+F GFTKQM+LEMCILSGCDYL SLPGMGLKRAH
Sbjct: 181 RIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI KF SY+KVI+HL+YSTV+VP YEESF KA+LTFQHQRVYDP TEDIVHLS ISD+
Sbjct: 241 ALIKKFLSYEKVIRHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDIVHLSQISDH 300
Query: 301 IGNDLDFLA 309
I +DLDFL
Sbjct: 301 IEDDLDFLG 309
>gi|326525617|dbj|BAJ88855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 906
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/413 (64%), Positives = 316/413 (76%), Gaps = 21/413 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM PI +++L G VAVDTYSWLHKGALSC LCKG+PT+RHI+YCM
Sbjct: 1 MGIQGLLPQLKSIMAPIRMEDLRGQTVAVDTYSWLHKGALSCGDRLCKGIPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPIL+FDGG LPMK EQE KRARSRKENL RA E E+ GNS A+++ YQ
Sbjct: 61 HRVNLLRHHGVKPILVFDGGFLPMKSEQEVKRARSRKENLERAREHEAAGNSRAAFDCYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P IA ELIQVLKQ+ V YIVAPYEADAQMTFL+V+K V+AVITEDSDLIPFGCS
Sbjct: 121 KAVDITPKIALELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEFQ + L++N++L GFTKQMLLEMCILSGCDYL SLPGMG+KRAH
Sbjct: 181 RIIFKMDKFGQGVEFQITRLERNRELDLNGFTKQMLLEMCILSGCDYLPSLPGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI K KS++KVIKHL+YS VSVPP YEE+F KA+ FQ QRVYDP TEDIVHLS I +
Sbjct: 241 ALIQKLKSHEKVIKHLRYSAVSVPPQYEENFKKAIWAFQFQRVYDPATEDIVHLSGIPSD 300
Query: 301 IGNDLDFLA--------KGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLK-NFKPESER 351
+ D DFL KGIA+G++DP T+ PF+ + S + +K + P + +
Sbjct: 301 LSED-DFLGPWLPQAVVKGIALGEIDPLTKEPFEASTPCSAPAADKGYPVKESIIPSNGK 359
Query: 352 KKLDLPVQKNLLT-----------KKFTTPRISPNHFSPEETSSLSPGEHHTA 393
K+L+LPVQKN+LT +KF P++ P + E+S SP +A
Sbjct: 360 KRLELPVQKNILTNYFCLTSLEAKRKFRAPKVIPKQQTLHESSLPSPQTEDSA 412
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
Query: 570 LHNNGYSDPNLDKTIATE-------TDEAKFGANISHLGSYSEIAEKSMERFVSVISKYR 622
L + + P +D+ T+ T E +FG N+SH+ +YS IAEKSM++F ++IS +R
Sbjct: 652 LPTSSHDSPAVDEGCGTDSLDDIDTTSEGRFGCNVSHVNTYSGIAEKSMDKFAALISSFR 711
Query: 623 CTSGSRASGLRAPLKDVRNTCTVRS 647
+GSRASGLRAPLKDV+NT +VRS
Sbjct: 712 -YAGSRASGLRAPLKDVKNTLSVRS 735
>gi|293335579|ref|NP_001167749.1| uncharacterized protein LOC100381439 [Zea mays]
gi|223943749|gb|ACN25958.1| unknown [Zea mays]
gi|414880249|tpg|DAA57380.1| TPA: hypothetical protein ZEAMMB73_036244 [Zea mays]
Length = 826
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/376 (67%), Positives = 301/376 (80%), Gaps = 9/376 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM PI EL G VAVDTYSWLHKGALSC LCKG+PT+RHI+YCM
Sbjct: 1 MGIQGLLPQLKSIMAPISAVELRGQTVAVDTYSWLHKGALSCGDRLCKGIPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVN+LRH+GV+PIL+FDGGLLP+K QE KRARSRKENL RA E E+ GNS A++E YQ
Sbjct: 61 HRVNMLRHFGVRPILVFDGGLLPIKSYQEGKRARSRKENLERAREHEAAGNSRAAFECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P IA ELI+VLK++NV+YIVAPYEADAQMTFL+V+K V+AVITEDSDLIPFGCS
Sbjct: 121 KAVDITPRIASELIEVLKKENVNYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEFQ + L++N++L F GFT+QMLLEMCILSGCDYL SLPGMG+KRAH
Sbjct: 181 RIIFKMDKFGQGVEFQITRLEQNRELDFNGFTRQMLLEMCILSGCDYLPSLPGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
ALI K K ++KVIKHL+Y VSVPP YEE F KA+ F+ QRVYDP TEDI+HLS + +
Sbjct: 241 ALIQKLKCHEKVIKHLRYGAVSVPPQYEEDFKKAIWAFKFQRVYDPATEDIIHLSSVPQS 300
Query: 301 IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKN-FKPESER 351
+ DL+FL AKGIA+G++DP T+ PF+ + S V + + P + R
Sbjct: 301 LIEDLEFLGPWLPQNIAKGIALGNIDPLTKEPFEINPECSAPSVHKVCPTREPIAPSNGR 360
Query: 352 KKLDLPVQKNLLTKKF 367
KKLDLPVQKN+LT F
Sbjct: 361 KKLDLPVQKNILTNYF 376
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 5/71 (7%)
Query: 577 DPNLDKTIATETDEAKFGANISHLGSYSEIAEKSMERFVSVISKYRCTSGSRASGLRAPL 636
DP+ D I TE +FG N+SH+ +YS IAEKSM++F ++IS +R G RASGLRAPL
Sbjct: 627 DPD-DTNIRTE---GRFGCNVSHVNTYSGIAEKSMDKFAALISSFR-YPGPRASGLRAPL 681
Query: 637 KDVRNTCTVRS 647
KDV+NT +VRS
Sbjct: 682 KDVKNTLSVRS 692
>gi|53791673|dbj|BAD53243.1| exonuclease-like protein [Oryza sativa Japonica Group]
Length = 783
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 319/683 (46%), Positives = 395/683 (57%), Gaps = 75/683 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR------ 54
MGIQGLLP LKSIM PI ++ L+G VAVDTYSWLHKGALSC LCKGLPT+R
Sbjct: 1 MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRFGSGDL 60
Query: 55 ----------------HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE 98
HI+YCMHRVN+LRH+GVKPIL+FDGG LPMK +QE KR RSRKE
Sbjct: 61 PPFLGTQGFLIHFADWHIEYCMHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKE 120
Query: 99 NLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFL 158
NL RA E ES GNS A++E YQKAVDI+P IA ELIQVLKQ+ V YIVAPYEADAQMTFL
Sbjct: 121 NLERAKEHESAGNSRAAFECYQKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFL 180
Query: 159 AVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLE 218
+V+K V+AVITEDSDLIPFGCSRIIFKMDKFGQGVEF + LQ+ ++L GFT QMLLE
Sbjct: 181 SVNKLVDAVITEDSDLIPFGCSRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLE 240
Query: 219 MCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTF 278
MCILSGCDYL SLPGMG+KRAHALI K K ++KVIKHL+YS VSVPP YEE+F KA+ F
Sbjct: 241 MCILSGCDYLPSLPGMGVKRAHALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAF 300
Query: 279 QHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQ 338
Q QRVYDP TEDIVH L + G + L+ + +V+ ++
Sbjct: 301 QFQRVYDPVTEDIVH-----------LSGIPHGKGLASLEAKRKFRAPKVTPKQQVL--- 346
Query: 339 NSHLKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFS---PEETSSLSPGEHHTAEA 395
N L + + E + DL +L + + S HFS P + S + + +
Sbjct: 347 NGSLPSPRIE-DSGTPDLIEDTSLPSNNIQVYQCSSEHFSSGTPLDDSINTASQCSSERV 405
Query: 396 SCDISCQSSSRMELETVGNFPHNSSEKNCFASEVPEFSASPSREMENERNAEHT------ 449
CDI S+ + P S + +E P+ + + R+ T
Sbjct: 406 RCDIPRDDSASVS-------PQCSHDIGSDPAEDPDIEGNKVKVNFCNRSTIPTGSFLEG 458
Query: 450 SLPQFCRSIRN-----PCPALRKEHENKNCTDSVVGKGRTENRKVIVRSSYFLHKQVNKD 504
+LP + P A + E N + NR + VRSSYF K VNK
Sbjct: 459 TLPGISDPFLDSHNTEPSRAAPRYAEKSNVV--------SANRNITVRSSYF--KTVNKR 508
Query: 505 DQENKQEKLVVENDAAIDMSENTGLQSAHFDYSYLKGTAIKRKTSLIDSVHTDKMGSKLM 564
N+ E + D TG + D G +KR+ D M
Sbjct: 509 VCTNQGEDECHDEDNC-----ETGNYTLPGDQQRSSGGILKRRKFSDPQNFEDGMFQPTS 563
Query: 565 RTNASLHNNGYSDPNLDKTIATETDEAKFGANISHLGSYSEIAEKSMERFVSVISKYRCT 624
+ + D + I T + E KFG N++H+ YS IAEKSM++F ++IS +R
Sbjct: 564 PHESPPVADKGCDSDSHDGINTNS-EGKFGCNVAHVNKYSGIAEKSMDKFAALISSFR-Y 621
Query: 625 SGSRASGLRAPLKDVRNTCTVRS 647
+GSRASGLRAPLKDV+NT VRS
Sbjct: 622 AGSRASGLRAPLKDVKNTLPVRS 644
>gi|255639461|gb|ACU20025.1| unknown [Glycine max]
Length = 287
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/286 (83%), Positives = 265/286 (92%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQG LPLLKSIM+PIHIK+L+GC VAVDTYSWLHKGALSCS ELCKG+PT+RHI+YCM
Sbjct: 1 MGIQGFLPLLKSIMVPIHIKDLKGCSVAVDTYSWLHKGALSCSTELCKGMPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+G KPIL+FDGGLLPMK EQENKRAR+RK+NLARA+E ES+GN +A+YE YQ
Sbjct: 61 HRVNLLRHFGDKPILVFDGGLLPMKSEQENKRARARKDNLARAVEHESDGNLAAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISP IA ELIQVLKQ+N+ YIVAPYEADAQMTFLA+S QV+AVITEDSDLIPFGC
Sbjct: 121 KAVDISPQIACELIQVLKQENLQYIVAPYEADAQMTFLAISGQVDAVITEDSDLIPFGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGV+FQ SMLQKNK+LSF GF +QMLLEMCILSGCDYLQSL GMGLKRAH
Sbjct: 181 RIIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLSGMGLKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
A I KF+SYDKV+KHL+YS VSVPPFYEESF KA+LTF++QRVYDP
Sbjct: 241 ASIKKFRSYDKVLKHLRYSGVSVPPFYEESFKKAILTFRYQRVYDP 286
>gi|222619346|gb|EEE55478.1| hypothetical protein OsJ_03659 [Oryza sativa Japonica Group]
Length = 762
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/297 (76%), Positives = 253/297 (85%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM PI ++ L+G VAVDTYSWLHKGALSC LCKGLPT+RHI+YCM
Sbjct: 1 MGIQGLLPQLKSIMAPIGLEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVN+LRH+GVKPIL+FDGG LPMK +QE KR RSRKENL RA E ES GNS A++E YQ
Sbjct: 61 HRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P IA ELIQVLKQ+ V YIVAPYEADAQMTFL+V+K V+AVITEDSDLIPFGCS
Sbjct: 121 KAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF + LQ+ ++L GFT QMLLEMCILSGCDYL SLPGMG+KRAH
Sbjct: 181 RIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
ALI K K ++KVIKHL+YS VSVPP YEE+F KA+ FQ QRVYDP TEDIVHLS I
Sbjct: 241 ALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLSGI 297
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 484 TENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSENTGLQSAHFDYSYLKGTA 543
+ NR + VRSSYF K VNK N+ E + D TG + D G
Sbjct: 469 SANRNITVRSSYF--KTVNKRVCTNQGEDECHDEDNC-----ETGNYTLPGDQQRSSGGI 521
Query: 544 IKRKTSLIDSVHTDKMGSKLMRTNASLHNNGYSDPNLDKTIATETDEAKFGANISHLGSY 603
+KR+ D M + + D + I T + E KFG N++H+ Y
Sbjct: 522 LKRRKFSDPQNFEDGMFQPTSPHESPPVADKGCDSDSHDGINTNS-EGKFGCNVAHVNKY 580
Query: 604 SEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVRNTCTVRS 647
S IAEKSM++F ++IS +R +GSRASGLRAPLKDV+NT VRS
Sbjct: 581 SGIAEKSMDKFAALISSFR-YAGSRASGLRAPLKDVKNTLPVRS 623
>gi|218189150|gb|EEC71577.1| hypothetical protein OsI_03950 [Oryza sativa Indica Group]
Length = 762
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/297 (76%), Positives = 252/297 (84%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM PI ++ L+G VAVDTYSWLHKGALSC LCKGLPT+RHI+YCM
Sbjct: 1 MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRHIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVN+LRH+GVKPIL+FDGG LPMK +QE KR RSRKENL RA E ES GNS A++E YQ
Sbjct: 61 HRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P IA ELIQVLKQ+ V YIVAPYEADAQMTFL+V+K V+AVITEDSDLIPFGCS
Sbjct: 121 KAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RIIFKMDKFGQGVEF + LQ+ ++L GFT QMLLEMCILSGCDYL SLPGMG+KRAH
Sbjct: 181 RIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
ALI K K ++KVIKHL+YS VSVPP YEE+F KA+ FQ RVYDP TEDIVHLS I
Sbjct: 241 ALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFHRVYDPVTEDIVHLSGI 297
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 484 TENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSENTGLQSAHFDYSYLKGTA 543
+ NR + VRSSYF K VNK N+ E + D TG + D G
Sbjct: 469 SANRNITVRSSYF--KTVNKRVCTNQGEDECHDEDNC-----ETGNYTLPGDQQRSSGGI 521
Query: 544 IKRKTSLIDSVHTDKMGSKLM-RTNASLHNNGYSDPNLDKTIATETDEAKFGANISHLGS 602
+KR+ D M + + + GY D + I T + E KFG N++H+
Sbjct: 522 LKRRKFSDPQNFEDGMFQPTSPHESPPVADKGY-DSDSHDGINTNS-EGKFGCNVAHVNK 579
Query: 603 YSEIAEKSMERFVSVISKYRCTSGSRASGLRAPLKDVRNTCTVRS 647
YS IAEKSM++F ++IS +R +GSRASGLRAPLKDV+NT VRS
Sbjct: 580 YSGIAEKSMDKFAALISSFR-YAGSRASGLRAPLKDVKNTLPVRS 623
>gi|186479030|ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana]
gi|332192992|gb|AEE31113.1| exonuclease 1 [Arabidopsis thaliana]
Length = 581
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 271/595 (45%), Positives = 343/595 (57%), Gaps = 91/595 (15%)
Query: 155 MTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQ 214
M FLA++KQV+A+ITEDSDLIPFGC RIIFKMDKFG GVEFQ S L KNKDLS GF+ Q
Sbjct: 1 MAFLAITKQVDAIITEDSDLIPFGCLRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQ 60
Query: 215 MLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKA 274
MLLEMCILSGCDYLQSLPGMGLKRAHALI+KFKSYD+VIKHLKYSTVSVPP YEESF +A
Sbjct: 61 MLLEMCILSGCDYLQSLPGMGLKRAHALITKFKSYDRVIKHLKYSTVSVPPLYEESFKRA 120
Query: 275 VLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDF--------LAKGIAIGDLDPFTQLPFQ 326
+LTF+HQRVYDP EDI+HL ISDN+G D DF +AKGIA+G LDPFTQLPFQ
Sbjct: 121 LLTFKHQRVYDPNAEDIIHLCDISDNLGEDSDFVGPSMPQDIAKGIALGQLDPFTQLPFQ 180
Query: 327 EVSDNSHLVVGQNSHLKNFKPESERKKLDLPVQKNLLTK-----------KFTTPRISPN 375
S L V S K+FKPE+ +KKLDLPVQKNLLTK KF PRISP
Sbjct: 181 AESVTPKLAVDDISRPKSFKPETVKKKLDLPVQKNLLTKYFCFASVEAKRKFKAPRISPM 240
Query: 376 HFSPEETSSLSPGEHHTAEASCDISCQSSSRMELETVGNFPHNSSEKNCFASEVPEFSAS 435
+P + S P ++ + D+ SS +T P S +N SEV E S
Sbjct: 241 SLTPTDESPSIPDDN-----TPDLDALSS-----QTTNESPVYSLGENPCVSEVAEKRDS 290
Query: 436 PSREM--ENERNAEHTSLPQFC-RSIRNP----------CPALRKEHENKN------CTD 476
P + N ++ H ++C R + P +++ E+K+ C +
Sbjct: 291 PDDDAVERNHKDLHH----KYCEREVDRPKSDSLKVIVRSKYFKQKQEDKSLKQSIPCLN 346
Query: 477 --SVVGK--------------GRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAA 520
SV+G+ R E+ + I S H ++ D ++ K+ N+ A
Sbjct: 347 DCSVIGQRKAVKTVINMSSASKREESHRAIATSPCLHHDRIYNDHEDAKEASFSAMNEVA 406
Query: 521 --------IDMSENTGLQSAHFDYSYLKGT---AIKRKTSLIDSVHTDKMGSKLMRTNAS 569
I+ N Q+ + T I + IDS H G + + ++ +
Sbjct: 407 ERTINTHKINHQINEEEQNPSVEIPSAFSTPENVIPLSSIAIDSCHGVATGKRKLDSDEN 466
Query: 570 LHNNGY---------SDPNLDKTIATETDEA-KFGANISHLGSYSEIAEKSMERFVSVIS 619
LH +D L+ ETD+ KFG+NISH+G YSEIAEKS+ERFVS IS
Sbjct: 467 LHKENLKSKHMRMDETDTALNAETPLETDDVEKFGSNISHIGHYSEIAEKSVERFVSAIS 526
Query: 620 KYRCT-SGSRASGLRAPLKDVRNTCTVRS-PVAVDFSQFEYVPKSRKSDLASRRL 672
++ + +GSRASGLRAPLKD+RNTC + + D S+F Y +R SRR+
Sbjct: 527 SFKYSGTGSRASGLRAPLKDIRNTCPSKGLSLKPDISKFGYASSNRHMVTKSRRM 581
>gi|168002170|ref|XP_001753787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695194|gb|EDQ81539.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/309 (63%), Positives = 245/309 (79%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM P HI++ G VA+DTYSWLHK A SCS+ELC GLP ++IDYCM
Sbjct: 1 MGIQGLLPTLKSIMNPRHIRDYAGKRVAIDTYSWLHKAAFSCSKELCLGLPNDKYIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVN+LRH+G++P+L+FDGG LPMK +QE KRARSRKENL RA+E E GN +A+ + YQ
Sbjct: 61 HRVNMLRHFGLQPVLVFDGGGLPMKSDQEMKRARSRKENLERALEHERLGNFTAAMQCYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AVDI+P+IA LI+VL+Q+NV Y+VAPYEADAQM FLA + V+ VITEDSDLI +GC
Sbjct: 121 RAVDITPAIAFRLIKVLRQENVEYVVAPYEADAQMAFLARNGHVDLVITEDSDLIAYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I FKMDK+GQGV FQ S + NKD+ F F++QM+LEMCI+SGCDYL SLPGMG+K+AH
Sbjct: 181 QIFFKMDKYGQGVGFQFSDITANKDIDFNNFSRQMILEMCIMSGCDYLPSLPGMGVKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
L+ +FK+Y KV+KHLK+S V + YE+ F +A+LTFQH RVYDP +VHL+ +
Sbjct: 241 GLMKRFKTYIKVMKHLKFSGVLIDEQYEQGFRRAILTFQHHRVYDPAKRAMVHLTDVPGE 300
Query: 301 IGNDLDFLA 309
+ NDL FL
Sbjct: 301 LVNDLHFLG 309
>gi|168048916|ref|XP_001776911.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671767|gb|EDQ58314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 327
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/309 (61%), Positives = 240/309 (77%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSIM P H +E G A+DTYSWLHK LSCSR+LC G ++IDYCM
Sbjct: 1 MGIQGLLPTLKSIMHPRHAQEYAGKRAAIDTYSWLHKAVLSCSRDLCHGRHNDKYIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +LR+YGV+P+L+FDGG LPMK +QE KRARSRKENL RA+E E GN SA+YE YQ
Sbjct: 61 RRVQMLRYYGVQPVLVFDGGSLPMKSDQEIKRARSRKENLERALEYERLGNHSAAYECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AVDI+P+IA LIQVL+Q+NV Y+VAPYEADAQ+ FLA+++ V+ VITEDSDLI +GC
Sbjct: 121 RAVDITPAIAFRLIQVLRQENVQYVVAPYEADAQLVFLALNRHVDFVITEDSDLIVYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I FKMDK GQGV FQ S + NKD+ FTKQM+LEMCI+SGCDYL SLPG+G+KR+H
Sbjct: 181 QIFFKMDKHGQGVGFQISDITANKDIDLSDFTKQMILEMCIMSGCDYLPSLPGIGVKRSH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
LI +F++Y K +KHL+ V + P YE+ F +A+LTF+H RVYDP +++VHL+ +
Sbjct: 241 GLIKRFRTYQKALKHLEAKGVLIDPQYEQGFHRAILTFRHHRVYDPVKKEMVHLTGVPSE 300
Query: 301 IGNDLDFLA 309
+ +LDFL
Sbjct: 301 LDTNLDFLG 309
>gi|302789395|ref|XP_002976466.1| hypothetical protein SELMODRAFT_175620 [Selaginella moellendorffii]
gi|302824817|ref|XP_002994048.1| hypothetical protein SELMODRAFT_138122 [Selaginella moellendorffii]
gi|300138102|gb|EFJ04882.1| hypothetical protein SELMODRAFT_138122 [Selaginella moellendorffii]
gi|300156096|gb|EFJ22726.1| hypothetical protein SELMODRAFT_175620 [Selaginella moellendorffii]
Length = 401
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/309 (61%), Positives = 244/309 (78%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSI ++KE G VAVDTYSWLHK A SCS+++C G T+ ++YCM
Sbjct: 1 MGIQGLLPALKSITTSTNVKEYSGMRVAVDTYSWLHKAAFSCSKDICDGRATASFLNYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+G+KP+L+FDGG LPMK EQE KR+R+R+E+L A ECE+ GN +A+Y+ YQ
Sbjct: 61 HRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P +AH+LI VL+++NV YIV+PYEADAQM FLA+ V+AVITEDSDL+ +GC
Sbjct: 121 KAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I+FKMDK GQG E Q + L KN+DL+ FTK+M+LEMCILSGCDYL SL GMG+KRAH
Sbjct: 181 KILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLPSLQGMGVKRAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
LI +F+SY+KVI+HLK+S V +P YEE F KA+LTF H VYDP +++VHL+ + +
Sbjct: 241 NLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQDELVHLTELPAD 300
Query: 301 IGNDLDFLA 309
+++FL
Sbjct: 301 CSEEVEFLG 309
>gi|22655212|gb|AAM98196.1| exonuclease, putative [Arabidopsis thaliana]
Length = 665
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 156/183 (85%), Positives = 172/183 (93%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIKELEGC VAVDTYSWLHKGALSCSRELCKGLPT RHI YCM
Sbjct: 1 MGIQGLLPLLKSIMVPIHIKELEGCIVAVDTYSWLHKGALSCSRELCKGLPTKRHIQYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPI++FDGG LPMK+EQENKRARSRKENLARA+E E+ GNSSA+YE Y
Sbjct: 61 HRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECYS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIAHELIQVL+Q+NV Y+VAPYEADAQM FLA++KQV+A+ITEDSDLIPFGC
Sbjct: 121 KAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGCL 180
Query: 181 RII 183
R+I
Sbjct: 181 RVI 183
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 256/499 (51%), Gaps = 91/499 (18%)
Query: 251 KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDF--- 307
+VIKHLKYSTVSVPP YEESF +A+LTF+HQRVYDP EDI+HL ISDN+G D DF
Sbjct: 181 RVIKHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDNLGEDSDFVGP 240
Query: 308 -----LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERKKLDLPVQKNL 362
+AKGIA+G LDPFTQLPFQ S L V S K+FKPE+ +KKLDLPVQKNL
Sbjct: 241 SMPQDIAKGIALGQLDPFTQLPFQAESVTPKLAVDDISRPKSFKPETVKKKLDLPVQKNL 300
Query: 363 LTK-----------KFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSRMELET 411
LTK KF PRISP +P + S P ++ + D+ SS +T
Sbjct: 301 LTKYFCLASVEAKRKFKAPRISPMSLTPTDESPSIPDDN-----TPDLDALSS-----QT 350
Query: 412 VGNFPHNSSEKNCFASEVPEFSASPSREM--ENERNAEHTSLPQFC-RSIRNP------- 461
P S +N SEV E SP + N ++ H ++C R + P
Sbjct: 351 TNESPVYSLGENPCVSEVAEKRDSPDDDAVERNHKDLHH----KYCEREVDRPKSDSLKV 406
Query: 462 ---CPALRKEHENKN------CTD--SVVGK--------------GRTENRKVIVRSSYF 496
+++ E+K+ C + SV+G+ R E+ + I S
Sbjct: 407 IVRSKYFKQKQEDKSLKQSIPCLNDCSVIGQRKAVKTVINMSSASKREESHRAIATSPCL 466
Query: 497 LHKQVNKDDQENKQEKLVVENDAA--------IDMSENTGLQSAHFDYSYLKGT---AIK 545
H ++ D ++ K+ N+ A I+ N Q+ + T I
Sbjct: 467 HHDRIYNDHEDAKEASFSAMNEVAERTINTHKINHQINEEEQNPSVEIPSAFSTPENVIP 526
Query: 546 RKTSLIDSVHTDKMGSKLMRTNASLHNNGY---------SDPNLDKTIATETDEA-KFGA 595
+ IDS H G + + ++ +LH +D L+ ETD+ KFG+
Sbjct: 527 LSSIAIDSCHGVATGKRKLDSDENLHKENLKSKHMRMDETDTALNAETPLETDDVEKFGS 586
Query: 596 NISHLGSYSEIAEKSMERFVSVISKYRCT-SGSRASGLRAPLKDVRNTCTVRS-PVAVDF 653
NISH+G YSEIAEKS+ERFVS IS ++ + +GSRASGLRAPLKD+RNTC + + D
Sbjct: 587 NISHIGHYSEIAEKSVERFVSAISSFKYSGTGSRASGLRAPLKDIRNTCPSKGLSLKPDI 646
Query: 654 SQFEYVPKSRKSDLASRRL 672
S+F Y +R SRR+
Sbjct: 647 SKFGYASSNRHMVTKSRRM 665
>gi|145336239|ref|NP_174256.2| exonuclease 1 [Arabidopsis thaliana]
gi|332192990|gb|AEE31111.1| exonuclease 1 [Arabidopsis thaliana]
Length = 665
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 156/183 (85%), Positives = 172/183 (93%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSIM+PIHIKELEGC VAVDTYSWLHKGALSCSRELCKGLPT RHI YCM
Sbjct: 1 MGIQGLLPLLKSIMVPIHIKELEGCIVAVDTYSWLHKGALSCSRELCKGLPTKRHIQYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLLRH+GVKPI++FDGG LPMK+EQENKRARSRKENLARA+E E+ GNSSA+YE Y
Sbjct: 61 HRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECYS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPSIAHELIQVL+Q+NV Y+VAPYEADAQM FLA++KQV+A+ITEDSDLIPFGC
Sbjct: 121 KAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGCL 180
Query: 181 RII 183
R+I
Sbjct: 181 RVI 183
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 256/499 (51%), Gaps = 91/499 (18%)
Query: 251 KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDF--- 307
+VIKHLKYSTVSVPP YEESF +A+LTF+HQRVYDP EDI+HL ISDN+G D DF
Sbjct: 181 RVIKHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDNLGEDSDFVGP 240
Query: 308 -----LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERKKLDLPVQKNL 362
+AKGIA+G LDPFTQLPFQ S L V S K+FKPE+ +KKLDLPVQKNL
Sbjct: 241 SMPQDIAKGIALGQLDPFTQLPFQAESVTPKLAVDDISRPKSFKPETVKKKLDLPVQKNL 300
Query: 363 LTK-----------KFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSRMELET 411
LTK KF PRISP +P + S P ++ + D+ SS +T
Sbjct: 301 LTKYFCFASVEAKRKFKAPRISPMSLTPTDESPSIPDDN-----TPDLDALSS-----QT 350
Query: 412 VGNFPHNSSEKNCFASEVPEFSASPSREM--ENERNAEHTSLPQFC-RSIRNP------- 461
P S +N SEV E SP + N ++ H ++C R + P
Sbjct: 351 TNESPVYSLGENPCVSEVAEKRDSPDDDAVERNHKDLHH----KYCEREVDRPKSDSLKV 406
Query: 462 ---CPALRKEHENKN------CTD--SVVGK--------------GRTENRKVIVRSSYF 496
+++ E+K+ C + SV+G+ R E+ + I S
Sbjct: 407 IVRSKYFKQKQEDKSLKQSIPCLNDCSVIGQRKAVKTVINMSSASKREESHRAIATSPCL 466
Query: 497 LHKQVNKDDQENKQEKLVVENDAA--------IDMSENTGLQSAHFDYSYLKGT---AIK 545
H ++ D ++ K+ N+ A I+ N Q+ + T I
Sbjct: 467 HHDRIYNDHEDAKEASFSAMNEVAERTINTHKINHQINEEEQNPSVEIPSAFSTPENVIP 526
Query: 546 RKTSLIDSVHTDKMGSKLMRTNASLHNNGY---------SDPNLDKTIATETDEA-KFGA 595
+ IDS H G + + ++ +LH +D L+ ETD+ KFG+
Sbjct: 527 LSSIAIDSCHGVATGKRKLDSDENLHKENLKSKHMRMDETDTALNAETPLETDDVEKFGS 586
Query: 596 NISHLGSYSEIAEKSMERFVSVISKYRCT-SGSRASGLRAPLKDVRNTCTVRS-PVAVDF 653
NISH+G YSEIAEKS+ERFVS IS ++ + +GSRASGLRAPLKD+RNTC + + D
Sbjct: 587 NISHIGHYSEIAEKSVERFVSAISSFKYSGTGSRASGLRAPLKDIRNTCPSKGLSLKPDI 646
Query: 654 SQFEYVPKSRKSDLASRRL 672
S+F Y +R SRR+
Sbjct: 647 SKFGYASSNRHMVTKSRRM 665
>gi|384248409|gb|EIE21893.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 347
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 159/295 (53%), Positives = 207/295 (70%), Gaps = 1/295 (0%)
Query: 1 MGIQGLLPLLKSIM-IPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYC 59
MGIQGLLPLLKSI P+H++ G AVD Y WLHK A CS ELC+G+ + R + YC
Sbjct: 1 MGIQGLLPLLKSITKSPVHVRRYSGQKAAVDAYGWLHKAAYCCSYELCEGIYSDRFVAYC 60
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
M RV L+ GV PI+IFDGG LPMK +E RARSR ENL +A GN++A+YE Y
Sbjct: 61 MQRVETLQQAGVSPIIIFDGGRLPMKSAEEGTRARSRSENLEKARAYWQAGNTTAAYESY 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
Q+AVDISP+ A +LI+ LK NV YIVAPYEADAQM +LA++ V+ VI+EDSD++ +GC
Sbjct: 121 QRAVDISPATAKQLIEALKAANVEYIVAPYEADAQMAYLAINGIVQVVISEDSDMLAYGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+ FKMDK G G E + L + ++ S GFT M LEMCIL+GCD+L++L +G+K+A
Sbjct: 181 PRVFFKMDKNGDGQEICMADLPECRNPSLIGFTPDMFLEMCILAGCDFLKALSSIGIKKA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
H I K+K++ +V K L++S V VP YE F +A+ TF+HQRVY P +VHL
Sbjct: 241 HGHIRKYKTFIRVCKSLRFSGVKVPREYEADFQRALWTFRHQRVYCPAARAVVHL 295
>gi|319411532|emb|CBQ73576.1| related to EXO1-exonuclease which interacts with Msh2p [Sporisorium
reilianum SRZ2]
Length = 758
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 215/335 (64%), Gaps = 10/335 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK I P+H+ G + VD Y WLH+GA C+RE+ G PT R+I + +
Sbjct: 1 MGIQGLLPLLKDIQTPVHVSSYAGKTLGVDAYVWLHRGAYGCAREIVLGDPTPRYIAHAL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+H+GVKP L+FDG LP K E+ R + R +NL RA E E +GN + + Y
Sbjct: 61 SRIRMLQHFGVKPYLVFDGDKLPAKSGTEDDREQRRSDNLRRANELEQQGNMQQARDVYA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +LI+VLK++ + Y+VAPYEADAQ+ +L V+ +ITEDSDL+ FGC
Sbjct: 121 KCVDITPEMAFQLIKVLKEERIPYVVAPYEADAQLAYLEAEGIVDGIITEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D+ G VE N+ ++ G+T +M ILSGCDYL S+ GMGLK AH
Sbjct: 181 TVLFKLDQAGNAVEMLQQRFWTNRQIALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ ++K+ DKV++ ++ + VPP Y F KA LTF HQRV+DP+++ +V L+ + D
Sbjct: 241 RLLRRYKTVDKVLQAVRLEGKMRVPPTYAREFRKAELTFVHQRVFDPRSQKLVTLTPLPD 300
Query: 300 NIGNDL---------DFLAKGIAIGDLDPFTQLPF 325
+++ D +AKG+A G +DP + P
Sbjct: 301 GTHDEMLPFIGAAMEDDVAKGVADGTIDPIARTPI 335
>gi|388854880|emb|CCF51561.1| related to EXO1-exonuclease which interacts with Msh2p [Ustilago
hordei]
Length = 813
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 215/332 (64%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK +PIHI G + +DTY WLH+GA C+RE+ G P R+I Y +
Sbjct: 1 MGIQGLLPLLKDASLPIHISSYSGRTLGIDTYVWLHRGAYGCAREIVLGDPAPRYISYAL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+H+G+KP L+FDG LP K E+ R R ENLARA + E+EG + + Y
Sbjct: 61 SRIGMLQHFGIKPYLVFDGDKLPAKTHTEDDRESKRSENLARAQQLEAEGKLQQARDLYA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A++LI+VLK+Q + Y+VAPYEADAQ+ +L ++AV+TEDSDL+ FGC+
Sbjct: 121 KCVDITPEMAYQLIKVLKEQAIPYLVAPYEADAQLAYLEKCGAIDAVLTEDSDLLVFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D+ G VE + N+ ++F G+T +M ILSGCDYL S+ GMGLK AH
Sbjct: 181 TVLFKLDQAGNAVEIKQERFWTNRQITFSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ + K+ DKV++ ++ + +PP Y F KA LTF HQRV+DP + +V L+ +
Sbjct: 241 RLLRRHKTVDKVLQVIRLEGKMRIPPTYASEFRKAELTFVHQRVFDPTSSKVVTLTPLPS 300
Query: 300 NIGNDL---------DFLAKGIAIGDLDPFTQ 322
+D+ D +A+ IA G +DP T+
Sbjct: 301 GTHDDMLPFIGAHIEDEMARAIADGIIDPITR 332
>gi|443897892|dbj|GAC75231.1| 5'-3' exonuclease [Pseudozyma antarctica T-34]
Length = 730
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 215/333 (64%), Gaps = 10/333 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK + P+H+ G + VD Y WLH+GA C+RE+ G PT R+I + +
Sbjct: 1 MGIQGLLPLLKDVQRPVHVSSYAGKTLGVDAYVWLHRGAYGCAREIVLGDPTPRYIAHAL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL+H+GVKP L+FDG LP K E+ R + R +NL RA + E EGN + + +
Sbjct: 61 SRIRLLQHFGVKPYLVFDGDKLPAKRGTEDDREQRRNDNLERANQLEREGNMQQARDLFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +LI+VLKQQ++ Y+VAPYEADAQ+ FL ++ +ITEDSDL+ FGC
Sbjct: 121 KCVDITPEMAFQLIKVLKQQDIPYVVAPYEADAQLAFLEAEGIIDGIITEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D+ G +E N+ L+ G+T +M ILSGCDYL S+ GMGLK AH
Sbjct: 181 TVLFKLDQAGNAIEMLQQRFWTNRQLALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ ++K+ DKV++ ++ + VP Y F KA LTF HQRV+DP+T+ +V L+ + D
Sbjct: 241 RLLRRYKTVDKVLQAVRLEGKLRVPNDYAREFRKAELTFVHQRVFDPRTQRLVTLTPLPD 300
Query: 300 NIGNDL---------DFLAKGIAIGDLDPFTQL 323
+D+ D +A G+A G +DP T++
Sbjct: 301 GTHDDMLPFIGANIQDDVAIGVAEGVIDPITRM 333
>gi|71018115|ref|XP_759288.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
gi|46099138|gb|EAK84371.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
Length = 828
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 213/335 (63%), Gaps = 10/335 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK + +H+ G + +D Y WLH+GA C+RE+ G PT R+I + +
Sbjct: 1 MGIQGLLPLLKDVQNSVHVSSYAGKTLGIDAYVWLHRGAYGCAREIVLGDPTPRYIAHAV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+H+GVKP L+FDG LP K E++R + R +NL RA E E E + + Y
Sbjct: 61 SRIRMLQHFGVKPYLVFDGDKLPAKKGTEDEREQRRSDNLRRAKELEQEKKLQQARDVYA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +LI+VLK+ N+ Y+VAPYEADAQ+ +L ++ V+TEDSDL+ FGC
Sbjct: 121 KCVDITPEMAFQLIKVLKEDNIPYVVAPYEADAQLAYLEAEGIIDGVVTEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D+ G VE N+ ++ G+T +M ILSGCDYL S+ GMGLK AH
Sbjct: 181 TVLFKLDQAGNAVEMLQHRFWTNRQVALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ ++K+ DKV++ ++ + +PP Y F KA LTF HQRV+DP+++ +V L+ + D
Sbjct: 241 RLLRRYKTVDKVLQAVRLEGKMRIPPTYSREFRKAELTFVHQRVFDPRSQKLVTLTPLPD 300
Query: 300 NIGNDL---------DFLAKGIAIGDLDPFTQLPF 325
+D+ D +AKG+A G +DP + P
Sbjct: 301 GTHDDMLPFIGAPMEDHMAKGVAEGIIDPIAKTPI 335
>gi|388854492|emb|CCF51879.1| related to EXO1-exonuclease which interacts with Msh2p [Ustilago
hordei]
Length = 814
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 216/332 (65%), Gaps = 12/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK +PIHI G + +DTY WLH+GA C+RE+ G P R+I Y +
Sbjct: 1 MGIQGLLPLLKDASLPIHISSYSGRTLGIDTYVWLHRGAYGCAREIVLGDPNPRYISYAL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+H+G+KP L+FDG LP K E+ ++ R ENLARA + E+EGN + + Y
Sbjct: 61 SRIGMLQHFGIKPYLVFDGDKLPAKTHTEDDESK-RSENLARAQQLEAEGNLQQARDLYA 119
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A++LI+VLK+Q + Y+VAPYEADAQ+ +L ++AV+ EDSDL+ FGC+
Sbjct: 120 KCVDITPEMAYQLIKVLKEQAIPYLVAPYEADAQLAYLEKCGAIDAVLMEDSDLLVFGCN 179
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D+ G VE + N+ ++ G+T +M ILSGCDYL S+ GMGLK AH
Sbjct: 180 TVLFKLDQAGNAVEIKQERF-TNRQIALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAH 238
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ + K+ DKV++ ++ +S+PP Y F KA LTF HQRV+DP + +V L+ +
Sbjct: 239 RLLRRHKTVDKVLQVVRLEGKMSIPPTYPSEFRKAELTFVHQRVFDPSSSKVVTLTPLPS 298
Query: 300 NIGNDL---------DFLAKGIAIGDLDPFTQ 322
+D+ D +A+ IA G +DP T+
Sbjct: 299 GTHDDMLPFIGAHIEDEMARAIADGIVDPITR 330
>gi|301103478|ref|XP_002900825.1| exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262101580|gb|EEY59632.1| exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 401
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 216/337 (64%), Gaps = 12/337 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP+LKSI +I+ G +A+D Y WLH+ SCS+E+C G T +++ Y M
Sbjct: 1 MGISGLLPVLKSITETKNIEAYRGQTLAIDGYCWLHRAIYSCSQEICLGQATDKYVTYFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ L H GV P ++FDGG LPMK E +R +SR++N ++ + + + +
Sbjct: 61 DRITALLHNGVTPYVVFDGGPLPMKKGTEEERRKSRQKNRELGVQHYNNKRFGEARKCFV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A D+SP +AH +IQ LK QNV+Y+VAPYEADAQ+ +L + + VITEDSD +PFGC
Sbjct: 121 RAADVSPYMAHRVIQHLKAQNVAYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGCQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FKMD+ E Q + L+KNK +SF FT+QM LEMCI SGCDYL S+PG GLK+A+
Sbjct: 181 TVLFKMDRDNIAQEIQTANLKKNKGMSFHMFTEQMFLEMCIFSGCDYLPSIPGFGLKKAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ + S+ K+++ L+ V +P YEE F KAVLTF+HQRVY P +++V L+ +
Sbjct: 241 TAMKQHGSFAKIVRALRLEGKVRIPATYEEDFRKAVLTFRHQRVYCPTKKELVPLTPVPA 300
Query: 300 NIGND---LDF--------LAKGIAIGDLDPFTQLPF 325
N+ +DF +AK IA GD+DP T PF
Sbjct: 301 NLLKTDPAMDFVGPMLSSDVAKAIAEGDMDPITMTPF 337
>gi|145341014|ref|XP_001415611.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575834|gb|ABO93903.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 330
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 213/323 (65%), Gaps = 5/323 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-LEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYC 59
MGI LLP LKSI H+ E G V VD Y WLH+GA +CSRELC+GLPT +H++Y
Sbjct: 1 MGIASLLPTLKSISRHAHVGETYAGQVVCVDAYVWLHRGAYACSRELCEGLPTRKHVEYF 60
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
++R L+ V+ I +FDGG LP K +E +R R+R E LA+A +GN+SA+ +FY
Sbjct: 61 LNRARTLKRANVRAIYVFDGGRLPGKANEEAQRRRNRSEALAKAKAHARQGNASAANDFY 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
+AVDI+P +A E+I+ L ++ + APYEADAQM +L + V VITEDSDLI GC
Sbjct: 121 VRAVDITPEMAREVIEALAREGFESLTAPYEADAQMAYLVKNGFVAGVITEDSDLIAHGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+ KM G G+E + L +N+ LSF GFT M LEMC+LSGCDYL SL G+G+K+A
Sbjct: 181 RSVFTKMAGDGSGIEIRFEELGRNRGLSFVGFTPDMFLEMCVLSGCDYLPSLNGVGVKKA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS---- 295
H+LI +FK+Y+KV++H+K+ ++VP YE F A+LTF++ VY P+ +IV+L+
Sbjct: 241 HSLIRRFKTYNKVLRHMKFEGIAVPKDYESRFVDALLTFKYSWVYCPQRREIVNLNDPVG 300
Query: 296 CISDNIGNDLDFLAKGIAIGDLD 318
+ ++ +DL L +G +D
Sbjct: 301 VLDQSLIDDLPRLIAHSRVGAID 323
>gi|330796677|ref|XP_003286392.1| hypothetical protein DICPUDRAFT_150348 [Dictyostelium purpureum]
gi|325083664|gb|EGC37111.1| hypothetical protein DICPUDRAFT_150348 [Dictyostelium purpureum]
Length = 916
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 218/337 (64%), Gaps = 11/337 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L + IH+K+ G VA+D YSWLHKGA SCS+EL G+PT+ +I+Y +
Sbjct: 1 MGISGLLPALSPVTKAIHVKDYAGKRVAIDGYSWLHKGAYSCSQELVLGIPTNGYINYFL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+R+ +L++Y V P++IFDGG LP K +E +R + R+E ++ EGN S + +Q
Sbjct: 61 NRIKMLQNYKVIPVVIFDGGPLPNKKGKEQERFQHREEYKSKGKAFLLEGNKSQANICFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P +A LI+ L++ + Y+VAPYEADAQ+TFL+++ QV+A+ITEDSDL+ +G S
Sbjct: 121 KAVDITPRLAFNLIKELRKHKIEYLVAPYEADAQLTFLSITGQVDAIITEDSDLVAYGAS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQ--KNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
+I KMDK G E + L K F FT+ ML +MCILSGCDYL SLPGMGLK
Sbjct: 181 NLILKMDKDGYAQEIKTEDLGSCKKDGYDFIDFTQTMLRQMCILSGCDYLPSLPGMGLKT 240
Query: 239 AHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ L+ + + +KV K+LK YE+ F KA TF+HQRVYDP T+ I L +
Sbjct: 241 SFKLLKQHRDIEKVFKYLKREKPGFTKEYEQQFYKADFTFRHQRVYDPVTKSITTLFPLD 300
Query: 299 DNIGND-LDF--------LAKGIAIGDLDPFTQLPFQ 326
+ D +DF +A+ IA+G +DP T + F+
Sbjct: 301 KDYPEDEIDFIGPLIEDSIAERIALGIIDPETLIEFE 337
>gi|359491497|ref|XP_002278082.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
Length = 541
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 225/351 (64%), Gaps = 22/351 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID 57
MGI+ LL +K + PIHIK+ G V +D YSWLHKGA SCS E+C KG SR++
Sbjct: 1 MGIKDLLRYMKPFIEPIHIKKYAGKRVGIDAYSWLHKGAYSCSMEICLNSKGDKKSRYLQ 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MHR++LLRHY + P+++FDGG +P K E +R R RK A+ EG+ + + E
Sbjct: 61 YFMHRIDLLRHYKITPVVVFDGGNIPCKATTEQERYRKRKSYCDLAMAKLKEGDVTGASE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFL----AVSKQVEAVITEDSD 173
+Q+AV I+PS+AH+LIQ+L+ +N+ ++VAPYEADAQ+ +L A + AVITEDSD
Sbjct: 121 LFQRAVTITPSMAHQLIQILRTENIEFVVAPYEADAQLAYLSNLEADKGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKN--KDLSFGGFTKQMLLEMCILSGCDYLQSL 231
L+ +GC IIFKMD++G G E + + + SF F K++ MC+L+GCD+L S+
Sbjct: 181 LMAYGCRAIIFKMDRYGNGEEMVLDRVFDSVARAPSFQNFDKELFTGMCVLAGCDFLPSV 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+G+ RA+++++K+++ D+V+ LK+ + +P Y +SF +AV FQH R+YD T+
Sbjct: 241 PGIGIARAYSMVAKYRNLDRVLSVLKFEKRNQMPEDYTKSFREAVAVFQHARIYDADTKR 300
Query: 291 IVHLSCISDN----IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
+ H+ ++D+ + +LDFL A IA G+LDP T F S
Sbjct: 301 VQHMKPLTDDLLQSLDGELDFLGPEIPPSIATAIAEGNLDPVTMEAFDHFS 351
>gi|297844758|ref|XP_002890260.1| hypothetical protein ARALYDRAFT_889222 [Arabidopsis lyrata subsp.
lyrata]
gi|297336102|gb|EFH66519.1| hypothetical protein ARALYDRAFT_889222 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 220/351 (62%), Gaps = 22/351 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID 57
MGI+ LL +K ++PIHI++ G V +D YSWLHKGA SCS ELC G R+ID
Sbjct: 1 MGIKDLLRFMKPYILPIHIQKYAGKRVGIDAYSWLHKGAYSCSMELCLDTDGKKKLRYID 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MHRVNLL+HY + P+++ DGG +P K ++R R RK N A+ EGN A+ E
Sbjct: 61 YFMHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRKRKANFDAAMVKLKEGNVGAATE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSK----QVEAVITEDSD 173
+Q+AV ++ S+AH+LIQVLK +NV +IVAPYEADAQ+ +L+ + + AVITEDSD
Sbjct: 121 LFQRAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLSSLELEHGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL--SFGGFTKQMLLEMCILSGCDYLQSL 231
L+ +GC +IFKMD++G+G E + + D SF F +++ MC+L+GCD+L S+
Sbjct: 181 LLAYGCKAVIFKMDRYGKGEELILDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPSV 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+G+ RAHA ISK++S ++V+ LK VP Y SF +AV FQH R+YD +
Sbjct: 241 PGVGISRAHAFISKYQSVERVLSFLKTKKGKLVPDDYSSSFTEAVSVFQHARIYDFDAKK 300
Query: 291 IVHLSCISDNIGN----DLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
+ HL +S N+ N L+FL A +A G++DP T F S
Sbjct: 301 LKHLKPLSQNLLNLPVGQLEFLGPDLSPSVAAAVAEGNIDPITMEAFNRFS 351
>gi|30685678|ref|NP_849684.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|332191554|gb|AEE29675.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 577
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 222/352 (63%), Gaps = 24/352 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID 57
MGI+ LL +K ++PIHI++ G V +D YSWLHKGA SCS ELC G R+ID
Sbjct: 1 MGIKDLLRFMKPYILPIHIQKYAGKRVGIDAYSWLHKGAYSCSMELCLDTDGKKKLRYID 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MHRVNLL+HY + P+++ DGG +P K ++R R RK N A+ EGN +A+ E
Sbjct: 61 YFMHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRQRKANFDAAMVKLKEGNVAAATE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE-----AVITEDS 172
+Q+AV ++ S+AH+LIQVLK +NV +IVAPYEADAQ+ +L+ S ++E AVITEDS
Sbjct: 121 LFQRAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLS-SLELEQGGIAAVITEDS 179
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL--SFGGFTKQMLLEMCILSGCDYLQS 230
DL+ +GC +IFKMD++G+G E + + D SF F +++ MC+L+GCD+L S
Sbjct: 180 DLLAYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPS 239
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTE 289
+PG+G+ RAHA ISK++S + V+ LK VP Y SF +AV FQH RVYD +
Sbjct: 240 VPGVGISRAHAFISKYQSVELVLSFLKTKKGKLVPDDYSSSFTEAVSVFQHARVYDFDAK 299
Query: 290 DIVHLSCISDNIGN----DLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
+ HL +S N+ N L+FL A IA G++DP T F S
Sbjct: 300 KLKHLKPLSHNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 351
>gi|18394573|ref|NP_564047.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|15215782|gb|AAK91436.1| At1g18090/T10F20_6 [Arabidopsis thaliana]
gi|21360461|gb|AAM47346.1| At1g18090/T10F20_6 [Arabidopsis thaliana]
gi|332191553|gb|AEE29674.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 577
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 219/351 (62%), Gaps = 22/351 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID 57
MGI+ LL +K ++PIHI++ G V +D YSWLHKGA SCS ELC G R+ID
Sbjct: 1 MGIKDLLRFMKPYILPIHIQKYAGKRVGIDAYSWLHKGAYSCSMELCLDTDGKKKLRYID 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MHRVNLL+HY + P+++ DGG +P K ++R R RK N A+ EGN +A+ E
Sbjct: 61 YFMHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRKRKANFDAAMVKLKEGNVAAATE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV----SKQVEAVITEDSD 173
+Q+AV ++ S+AH+LIQVLK +NV +IVAPYEADAQ+ +L+ + AVITEDSD
Sbjct: 121 LFQRAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLSSLELEQGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL--SFGGFTKQMLLEMCILSGCDYLQSL 231
L+ +GC +IFKMD++G+G E + + D SF F +++ MC+L+GCD+L S+
Sbjct: 181 LLAYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPSV 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+G+ RAHA ISK++S + V+ LK VP Y SF +AV FQH RVYD +
Sbjct: 241 PGVGISRAHAFISKYQSVELVLSFLKTKKGKLVPDDYSSSFTEAVSVFQHARVYDFDAKK 300
Query: 291 IVHLSCISDNIGN----DLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
+ HL +S N+ N L+FL A IA G++DP T F S
Sbjct: 301 LKHLKPLSHNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 351
>gi|357124321|ref|XP_003563849.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 556
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 220/351 (62%), Gaps = 22/351 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID 57
MGI LL +K + P+HIK+ G V +D YSWLHKGA SCS ELC K R+I
Sbjct: 1 MGIPNLLRFMKPFIEPVHIKKYAGQRVGIDAYSWLHKGAYSCSMELCLDPKSGGARRYIS 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MH +NLLRH+ V P+++FDG +P K + R + R +L A E +GN++A+ +
Sbjct: 61 YFMHHINLLRHHKVVPVVVFDGCSMPCKSATDKDRHKKRDLSLVLAKEKLEQGNTAAAID 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV----SKQVEAVITEDSD 173
F++KAV I+PS+A++LIQ+L+ +NV ++VAPYEADAQ+ +LA + AVITEDSD
Sbjct: 121 FFRKAVQITPSMAYQLIQILRSENVEFLVAPYEADAQLAYLATLDADQGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEF--QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
LI +GC+ IIFKMD+FG G EF + +M LSF F + + MC+L+GCD+L S+
Sbjct: 181 LIAYGCTAIIFKMDRFGNGEEFIMKKTMETVKDGLSFKDFDQNLFTGMCVLAGCDFLPSV 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYST-VSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+G KRA++LISK+K+ D+V+ LK SVP Y +SF K + F H RVYD K++
Sbjct: 241 PGIGTKRAYSLISKYKNIDRVLSTLKLGKRYSVPDDYSDSFWKTLAVFNHARVYDVKSKT 300
Query: 291 IVHLSCISDN----IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
+ HL + + + DLD L A+ IA G L+P T F S
Sbjct: 301 LKHLKPLEEQYLNYLAGDLDILGPALAPSMARAIAEGHLNPVTMEAFDNFS 351
>gi|134108762|ref|XP_777034.1| hypothetical protein CNBB5600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259717|gb|EAL22387.1| hypothetical protein CNBB5600 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 214/341 (62%), Gaps = 18/341 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK + + HI E +G +AVD Y WLHKGA C+ +L KG +++ ++Y M
Sbjct: 1 MGISGLLPLLKEVSVHGHISEFKGKKLAVDGYVWLHKGAFGCAEDLVKGKKSTKFVEYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV LRH+G++P L+FDGG LP K E RA++R ENL +A E++G + E Y
Sbjct: 61 YRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKTRLENLEKARSLEAQGRMKEAKEAYT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC- 179
+ VD++P +A++LI+ L+ +NV Y+VAPYEADAQ+ FL V+ +ITEDSDL+ FGC
Sbjct: 121 RCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQLCFLEREGYVDGIITEDSDLLVFGCK 180
Query: 180 --SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
SR+IFK+DK GQ V L ++ G+T M +LSGCDYL S+PG+G+K
Sbjct: 181 KASRVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRMAMLSGCDYLDSIPGIGIK 240
Query: 238 RAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
AH L+ +F S +K+++H++ T VPP Y F +A L F +QRVYDP +VHL+
Sbjct: 241 TAHRLMRRFNSVEKLLQHIRLEGTYLVPPTYLSDFAQAELAFLYQRVYDPSLGRLVHLNP 300
Query: 297 ISDN-------------IGNDL-DFLAKGIAIGDLDPFTQL 323
+ +G D+ + LA+ +A GD+ P T +
Sbjct: 301 LPPASTGFQLGDEGEKWVGVDVEEGLARRMARGDVHPETGM 341
>gi|321252528|ref|XP_003192437.1| exonuclease [Cryptococcus gattii WM276]
gi|317458905|gb|ADV20650.1| Exonuclease, putative [Cryptococcus gattii WM276]
Length = 1015
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 211/341 (61%), Gaps = 18/341 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK + + HI E +G Y WLHKGA C+ +L KG +++ +DY M
Sbjct: 1 MGISGLLPLLKEVSVNGHISEFKGKKNGKQGYVWLHKGAFGCAEDLVKGKKSTKFVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV LRH+G++P L+FDGG LP K E RA+SR ENL +A E++G + E Y
Sbjct: 61 YRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKSRLENLEKARSLEAQGRIKEAKEAYT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC- 179
+ VD++P +A++LI+ L+ +NV Y+VAPYEADAQ+ FL V+ +ITEDSDL+ FGC
Sbjct: 121 RCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQLCFLEREGYVDGIITEDSDLLVFGCK 180
Query: 180 --SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
SR+IFK+DK GQ V L K ++ G+T M +LSGCDYL S+PG+G+K
Sbjct: 181 RASRVIFKLDKDGQCVWIHRDRLAKVREFPMHGWTDMHFRRMAMLSGCDYLDSIPGIGIK 240
Query: 238 RAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
AH L+ +F S +K+++H++ T +PP Y F +A L F +QRVYDP +VHL+
Sbjct: 241 TAHRLMRRFNSVEKLLQHIRLEGTYLIPPTYLSDFAQAELAFLYQRVYDPSLGRLVHLNP 300
Query: 297 ISDN-------------IGNDL-DFLAKGIAIGDLDPFTQL 323
+ +G D+ + LA+ +A GD+ P T L
Sbjct: 301 LPPTTTGFQLGEEGEKWVGVDVEEGLARRMARGDVHPETGL 341
>gi|307106511|gb|EFN54756.1| hypothetical protein CHLNCDRAFT_24009 [Chlorella variabilis]
Length = 341
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 209/300 (69%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+SI H+ + G VAVD Y LH+GA +CSREL +G PTSRH+ YCM
Sbjct: 1 MGIAGLLPQLRSITKKAHVSKYRGQTVAVDAYCLLHRGAYTCSRELVEGEPTSRHVAYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL GV P+++FDGG LP K ++E R R+R+EN +RA + +GN +A+ E YQ
Sbjct: 61 ARIELLLGAGVTPLVVFDGGRLPNKADEERSRERNREENKSRARQLWQQGNKAAAMECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDISPS A + ++ LK++++ Y+VAPYEADAQM +LAV+ V+ V+TEDSDL+ +GC
Sbjct: 121 KAVDISPSHAKQFVEALKRRSIKYVVAPYEADAQMAYLAVNGYVDVVLTEDSDLLCYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+ FKMDK G+G E Q L + KDL+F GF + EMC+L+GCD++ SLPG+G+K+AH
Sbjct: 181 TVFFKMDKNGEGEEVQLEDLPQCKDLAFQGFGHDLFQEMCVLAGCDFVSSLPGIGIKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
+ + + + KV++ L++ +P YE+ +A+ TF+HQRVY P+ +V L I+D
Sbjct: 241 QHLRRTRCFLKVVRSLRFDGTKIPEGYEQRVQRALWTFKHQRVYCPRRHAVVPLHEIADG 300
>gi|348686536|gb|EGZ26351.1| hypothetical protein PHYSODRAFT_540882 [Phytophthora sojae]
Length = 398
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 212/338 (62%), Gaps = 13/338 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP+LKSI I++ G +A+D Y WLH+ SCS+E+C G T +++ Y M
Sbjct: 1 MGISGLLPVLKSITETKSIEQYRGRTLAIDGYCWLHRAIYSCSQEICLGQETDKYVTYFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ L H GV P ++FDGG LPMK E +R ++R++N ++ + S + +
Sbjct: 61 DRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKARQKNRELGVQHYNNKRFSEARRCFI 120
Query: 121 KAVDISPSIAHELIQV-LKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
+A D+SP +AH +IQ LK NV Y+VAPYEADAQ+ +L + + VITEDSD +PFGC
Sbjct: 121 RAADVSPYMAHRVIQQHLKAHNVQYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++FKMD+ E Q L+KNK LSF FT+QM LEMCI SGCDYL S+ G GLK+A
Sbjct: 181 QTVLFKMDRDNVAQEIQAVNLKKNKGLSFHMFTEQMFLEMCIFSGCDYLPSISGFGLKKA 240
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ + + S+ K+I+ L+ V +P YE+ F KAVLTF+HQRVY PK +++V L+ I
Sbjct: 241 YTAMKQHGSFTKIIRALRLEGKVRIPASYEDDFRKAVLTFRHQRVYCPKKKELVPLTPIP 300
Query: 299 DN---IGNDLDF--------LAKGIAIGDLDPFTQLPF 325
N I +DF +A+ IA GD+DP T F
Sbjct: 301 ANLLEIDPTMDFVGPMLDSDIAQAIADGDMDPITMARF 338
>gi|326506138|dbj|BAJ91308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 219/351 (62%), Gaps = 22/351 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID 57
MGI LL +K + P+HIK+ G V +D YSWLHKGA SCS ELC + R+I
Sbjct: 1 MGIPNLLRFMKPFIEPVHIKKYAGQRVGIDAYSWLHKGAYSCSMELCMSPRSPGARRYIS 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MH VNLLRH+ V P+++FDGG +P K + R + R+ +L E +G+ +A+ +
Sbjct: 61 YFMHHVNLLRHHKVVPVVVFDGGSMPCKSATDEDRHKKRELSLVLGKEKLEQGDKAAAID 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV----SKQVEAVITEDSD 173
++KAV I+PS+A++LIQVLK +NV ++VAPYEADAQ+ +LA + AVITEDSD
Sbjct: 121 HFRKAVQITPSMAYQLIQVLKTENVEFVVAPYEADAQLAYLATLDADQGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCS-MLQKNKD-LSFGGFTKQMLLEMCILSGCDYLQSL 231
LI +GC+ IIFKMD+FG G EF L+ KD L F F + + MC+L+GCD+L S+
Sbjct: 181 LIAYGCTAIIFKMDRFGNGEEFIMEKTLETVKDGLCFQDFDQNLFTGMCVLAGCDFLPSV 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYST-VSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+G KRA++LISK K+ D V+ LK SVP Y +SF K + F H RVYD K++
Sbjct: 241 PGIGTKRAYSLISKHKNIDLVLSTLKLDKRYSVPDDYIDSFWKTLAVFNHARVYDVKSKS 300
Query: 291 IVHLSCISDN----IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
+ HL + + + DLD L A+ IA G L+P T F++ S
Sbjct: 301 LKHLKPLEERYLNYLAGDLDILGPALAPSMARAIAEGRLNPVTMETFEQFS 351
>gi|402222231|gb|EJU02298.1| PIN domain-like protein, partial [Dacryopinax sp. DJM-731 SS1]
Length = 342
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 218/341 (63%), Gaps = 12/341 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLLPLL I IH+ E+ G A+D YSWLHKGA C+ +L KG T +++DY M
Sbjct: 1 MGIKGLLPLLGDIREDIHVSEVAGRTYAIDGYSWLHKGAWGCAEQLAKGEKTVKYVDYFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LLR++ ++P ++FDGG LP K E +R++SR E LA+A E ++G +S + EFY
Sbjct: 61 GRIRLLRYHNIEPFVVFDGGPLPAKKGTEEERSKSRAEALAQARELLAKGKASEAREFYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+DI+P A ++I+ LK ++V Y+VAPYEADAQM +L + V +ITEDSDL+ FGC
Sbjct: 121 KALDITPEHAFQVIKALKSEDVQYVVAPYEADAQMAYLENAGHVHGIITEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D GQ + S L K K+ SF G+ + M +LSGCDYL S+ GMGLK AH
Sbjct: 181 DVLFKLDTDGQCKRVRRSRLTKCKEASFVGWGDKEFRWMAMLSGCDYLPSIQGMGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL----- 294
L+ ++K+ D+V++H++ + VP Y++ F A L F QRVY P + +VHL
Sbjct: 241 RLLRQWKTVDRVLQHVRREGKMKVPKRYQQDFEMAELAFVFQRVYCPLAQKLVHLRERPW 300
Query: 295 -----SCISDNIGNDLD-FLAKGIAIGDLDPFTQLPFQEVS 329
+G DLD +A+ IA G+L P + P +++S
Sbjct: 301 EVAWNDAKEAYVGADLDPGIAQRIASGELCPISHQPIKDIS 341
>gi|328862806|gb|EGG11906.1| hypothetical protein MELLADRAFT_41659 [Melampsora larici-populina
98AG31]
Length = 484
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 223/384 (58%), Gaps = 18/384 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSI HIKE G +A+D Y WLH+ A C++ELC G T++HIDY M
Sbjct: 1 MGIQGLLPFLKSIQRSSHIKEWAGKTLAIDAYVWLHRAAYGCAQELCLGTRTTKHIDYVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV+LLRH+GV P ++FDG LP K E R + R+ NLA A SEG + E +
Sbjct: 61 ARVDLLRHHGVIPYVVFDGDALPGKRGTEEAREKRRQTNLALANSLLSEGKKEEAREAFV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA DI+P IAH++I LK+ V Y+VAPYEADAQ+ FL + ++ ++TEDSDL+ +G
Sbjct: 121 KATDITPQIAHDIILSLKEAGVKYVVAPYEADAQLRFLELHGHIDGILTEDSDLLVYGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D G + K KD +T +M ILSGCDYL S+ G+GLK+A+
Sbjct: 181 NVLFKLDPLGHCIHISRDDFGKVKDTQLSLWTDTEFRQMAILSGCDYLPSIHGLGLKKAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
LI +KS ++ IK + ++ VP YE F +A LTF +Q VYDP T +VHL +
Sbjct: 241 QLIKTYKSAERAIKATRLEGSLKVPLGYEALFRRAELTFLYQIVYDPTTRKLVHLHPLPS 300
Query: 300 NIGNDLDFLAKG----------IAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPES 349
+ N D ++ G +A G DPFT+ FQ S N V + ++ +P S
Sbjct: 301 SQPNPEDLVSCGEFWEDQVAVAVAEGRADPFTKTTFQS-SINVLPSVSTSRFIERSRP-S 358
Query: 350 ER-----KKLDLPVQKNLLTKKFT 368
+R K +P Q+ L + FT
Sbjct: 359 QRSHPSSKPTAIPNQRTLKSFAFT 382
>gi|224133192|ref|XP_002321506.1| predicted protein [Populus trichocarpa]
gi|222868502|gb|EEF05633.1| predicted protein [Populus trichocarpa]
Length = 457
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 218/347 (62%), Gaps = 22/347 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS---RHID 57
MG++ LL +K + P+HIK+ G V +D YSWLHKGA SCS E+C + R++D
Sbjct: 1 MGVKDLLKFMKPYIEPVHIKKYNGKRVGIDAYSWLHKGAYSCSMEICLNSNSEKKLRYLD 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MHR+NLLRHY + P+++FDGG +P K E R R RK N A+E EGN++A+ E
Sbjct: 61 YFMHRINLLRHYKITPVVVFDGGNIPCKAGTEQDRYRKRKANRELAMEKLKEGNANAATE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ----VEAVITEDSD 173
F+Q+A+ I+P +AH+LIQ+L+ +N+ ++VAPYEADAQ+ LA + + AVITEDSD
Sbjct: 121 FFQRAISITPLMAHQLIQILRSENIEFLVAPYEADAQLAHLASLEAERGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSML--QKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
L+ +GC IFKMD++G G E + + SF F K++ + MC+L+GCD+L S+
Sbjct: 181 LLAYGCQATIFKMDRYGNGEEIVLDKVFDAAARKPSFQCFDKELFMGMCVLAGCDFLPSV 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYST-VSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+G+ +AH+ +SK+++ D+V+ LK +P Y +SF +A+ FQH R+YD +
Sbjct: 241 PGIGISKAHSYVSKYRNLDRVLSVLKLEKGRQMPEDYSKSFIEALAVFQHARIYDSNNKR 300
Query: 291 IVHLSCISDN----IGNDLDFL--------AKGIAIGDLDPFTQLPF 325
+ H+ + N + LDFL A IA G+LDP T F
Sbjct: 301 LEHMKPVPQNLLESLEGKLDFLGPEIPPSVATAIAEGNLDPTTMEAF 347
>gi|298708478|emb|CBJ30602.1| exonuclease [Ectocarpus siliculosus]
Length = 722
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 230/373 (61%), Gaps = 47/373 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK + +HI+EL+G V VDTY WLHKG SCS ELC+G+ T + I YC+
Sbjct: 1 MGITGLLPLLKPVTKDVHIRELKGLTVGVDTYCWLHKGIYSCSAELCQGIATDKFIKYCV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV+LL +GVKP L+FDGG LP K +E +R R+ NL R ++ EGN S +++F+
Sbjct: 61 ERVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLMREGNPSGAHQFFC 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA D++P +AH++I+ + V Y+VAPYEADAQ+ FLA + V+AVITEDSD++ FGC+
Sbjct: 121 KAADVTPFMAHQVIKRIP--GVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCT 178
Query: 181 RIIFKMDKFGQG--VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
R++FK+D+ G G V+ + ++N +L G + L+ +C LSGCDYL S+ GMGLK+
Sbjct: 179 RVVFKLDRDGTGQEVDLREVFSRRNDELDMRGMNEDDLMTLCALSGCDYLPSVHGMGLKK 238
Query: 239 AHALISKFKS------------YDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYD 285
A+ ++S+ K K+++ +K+ S S P YE F +A+LTF+HQR +D
Sbjct: 239 AYRMVSRHKEASAIAANPAIIWLPKILRAVKFDSAGSFPRGYEADFQRALLTFRHQRAFD 298
Query: 286 PKTEDIVHL---------------SCISDNIG-NDLD------FLA------KGIAI--G 315
P + +VH+ S +D +G DLD FL +G A+ G
Sbjct: 299 PVSRSVVHMTPLPEILPSAITTAPSAANDGMGPRDLDRAAALAFLGPPVEQERGCAVADG 358
Query: 316 DLDPFTQLPFQEV 328
D+DP T F E+
Sbjct: 359 DVDPITGETFSEM 371
>gi|159488115|ref|XP_001702066.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271440|gb|EDO97259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 294
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 202/294 (68%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL LKSI P H+ G VA+D YSWLHKGA SCSRELC+G+ ++ Y +
Sbjct: 1 MGINGLLQQLKSISKPKHVSAYRGQKVAIDGYSWLHKGAYSCSRELCEGIWADGYVRYFV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV+LL GV PI++FDG LPMK ++E+ R R R+E L RA GN +A+ E YQ
Sbjct: 61 GRVDLLLGNGVVPIVVFDGCRLPMKADEEDNRRRGRREALERARAHAESGNMAAANECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AV+I+P +A +I+ L+++ V +VAPYEADAQ+++LA+ +V AV+TEDSD++ +GC
Sbjct: 121 RAVNITPWMAKVVIEALRERGVRCLVAPYEADAQLSYLALRGEVHAVLTEDSDMLAYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R+++K+D+ G G E + L ++L+ GF MLL+MCIL+GCD+L ++ G+G+K+AH
Sbjct: 181 RVLYKLDRAGHGEEVLLADLPLVRELNMAGFDHDMLLQMCILAGCDFLPNISGVGIKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
LI K + + +V++ L+++ +VPP YE F + + F+HQRV+ P + HL
Sbjct: 241 GLIKKHRDFVRVVRTLRFNGTTVPPNYEVRFQRTLWLFRHQRVFCPAARAMAHL 294
>gi|392577150|gb|EIW70280.1| hypothetical protein TREMEDRAFT_43853 [Tremella mesenterica DSM
1558]
Length = 361
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 201/314 (64%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP+LK I + HI +G +AVD Y WLHKGA C+ +L KG T++ +DY M
Sbjct: 1 MGISGLLPMLKGIQVDGHISHFKGKRLAVDAYVWLHKGAFGCAEDLVKGKKTTKFVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LL+H+G+ P ++FDGG LP K E RA+SR E LARA ES+G + E Y
Sbjct: 61 HRVRLLKHHGITPFIVFDGGPLPAKKGTEVSRAKSRAEYLARAQSMESQGRWKEARECYT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A++LI+ L+ + + Y+VAPYEADAQ+ FL V+ +ITEDSDL+ FGC
Sbjct: 121 KCVDITPEMAYQLIKALRAEGIEYVVAPYEADAQLCFLEREGWVDGIITEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FK+D GQ V L +D G+T M +LSGCDYL S+ G+G+K AH
Sbjct: 181 QVVFKLDHNGQCVWIHRERLASIRDFPMHGWTDHHFRRMAMLSGCDYLDSIQGIGIKTAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
L+ K K+ +KV+++++ ++VP Y + F +A L F HQRVYDP ++ +V L+ +
Sbjct: 241 RLLRKHKTVEKVLQNVRLDGMNVPKDYVKMFNQAELAFIHQRVYDPGSKRLVPLNDFPET 300
Query: 301 IGNDLDFLAKGIAI 314
N+ D G+ +
Sbjct: 301 GLNEEDERWVGLYV 314
>gi|308799503|ref|XP_003074532.1| exonuclease, putative; 92014-93872 (ISS) [Ostreococcus tauri]
gi|116000703|emb|CAL50383.1| exonuclease, putative; 92014-93872 (ISS) [Ostreococcus tauri]
Length = 1004
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 186/272 (68%), Gaps = 1/272 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCC-VAVDTYSWLHKGALSCSRELCKGLPTSRHIDYC 59
MGI LLP LKSI H+ + G V VD Y WLH+GA +CSRELC+G+ T++H++Y
Sbjct: 1 MGISALLPALKSIERAAHVGDAYGGAKVCVDAYVWLHRGAYACSRELCEGVKTTKHVEYF 60
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
++R LR GV+ + +FDGG LP K +E +R R+R+E L +A GN+SA+ E Y
Sbjct: 61 VNRARGLRRSGVEAVFVFDGGRLPGKAAEEAQRRRNRREALDKAKTHARNGNASAANECY 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
+AVD++P +A E+I+ L+++ + APYEADAQM +L V AVITEDSDLI GC
Sbjct: 121 VRAVDVTPEMAREVIEALEREGFECLTAPYEADAQMAYLVKHGFVSAVITEDSDLIAHGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+ KM G G+E + L KN+ +SF GFT QM LEMC+LSGCDYL SL G+GLK+A
Sbjct: 181 KSVFTKMSPDGSGIEIRFEELGKNRGMSFVGFTPQMFLEMCVLSGCDYLPSLAGVGLKKA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESF 271
H+LI +FK+Y+KV++H+K+ +SVP YE F
Sbjct: 241 HSLIRRFKTYNKVLRHMKFEGISVPKDYEARF 272
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%)
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
H+LI +FK+Y+KV++H+K+ +SVP YE F A++TF++ VY PK + +V+L+
Sbjct: 346 HSLIRRFKTYNKVLRHMKFEGISVPKDYEARFVDALMTFKYSWVYCPKRQKLVNLN 401
>gi|353240941|emb|CCA72785.1| related to EXO1-exonuclease which interacts with Msh2p
[Piriformospora indica DSM 11827]
Length = 827
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 216/341 (63%), Gaps = 13/341 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSI + + +L G +AVD Y WLHKGA C+ EL G PT+++IDY M
Sbjct: 1 MGIQGLLPLLKSIQQQVKLSDLSGKTLAVDGYVWLHKGAYGCATELATGKPTTKYIDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HR+ LLR+YG++P L+FDGG LP K E +R ++R+E+LA+A + S G S + + Y
Sbjct: 61 HRIRLLRYYGIEPYLVFDGGPLPAKEGTELERRKNREESLAKAKQLASRGRHSEARDLYA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VDISP A +LI+ L+ ++V+Y+VAPYEADAQ+ +L S V+ ++TEDSDL+ FGC
Sbjct: 121 RCVDISPKHAFQLIKALRAESVAYVVAPYEADAQLAYLERSGIVQGILTEDSDLLVFGCQ 180
Query: 181 RIIFKMDKFGQGVE-FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+ FK+D V + + D++ +T M ++SGCDYL+ L G+G++ A
Sbjct: 181 NVYFKLDTSTYTVAHIARAKFSQVTDINLALWTDTEFRHMAMMSGCDYLEGLKGIGVRTA 240
Query: 240 HALISKFKSYDKVIKH--LKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL--- 294
+ L+ K+KS ++V+K L+ T VP Y E+F KA L F +QRVYD + +VHL
Sbjct: 241 NKLLRKYKSLERVLKFIALESKTARVPKGYLEAFRKAELAFLYQRVYDSTQKRLVHLVEP 300
Query: 295 --SCISDN----IGNDLDF-LAKGIAIGDLDPFTQLPFQEV 328
+ +S+ +G +L LA+ IA GD P + P ++
Sbjct: 301 PSTGLSEEDDLFVGRELPLDLAQNIATGDYCPLSHEPIVDI 341
>gi|255577346|ref|XP_002529553.1| exonuclease, putative [Ricinus communis]
gi|223530965|gb|EEF32822.1| exonuclease, putative [Ricinus communis]
Length = 576
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 219/344 (63%), Gaps = 28/344 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS---RHID 57
MGI+ LL +K + P+HIK+ G V +D YSWLHKGA SCS E+C + R++D
Sbjct: 1 MGIKDLLKFMKPYVEPVHIKKYTGKRVGIDAYSWLHKGAYSCSMEICLDSNSDKKLRYLD 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MHR+NLLRHY + P+++FDG +P K E++R R R+ N A+E +GN +A+ E
Sbjct: 61 YFMHRINLLRHYKITPVVVFDGASIPCKATTEHERHRRRESNRKLAMEKLEQGNVNAANE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFL----AVSKQVEAVITEDSD 173
F+Q+AV I+P +AH+LIQ+L+ + V ++VAPYEADAQ+ +L A + AVITEDSD
Sbjct: 121 FFQRAVSITPLMAHQLIQILRSEKVEFVVAPYEADAQLAYLSSLDAEKGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL-----SFGGFTKQMLLEMCILSGCDYL 228
L+ +GC +FKMD+FG G E +L K + SF F +++ MC+L+GCD+L
Sbjct: 181 LLAYGCQATVFKMDRFGNGEEI---VLDKVYNAVACKPSFQHFDRELFTGMCVLAGCDFL 237
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPK 287
S+PG+G+ +AH+ + K+++ D+V+ LK + +P Y +SF +A+ FQH R+YD
Sbjct: 238 PSVPGIGIVKAHSFVVKYRNLDRVLSVLKLEKGNQMPEDYSKSFREALAVFQHARIYDAT 297
Query: 288 TEDIVHLSCIS----DNIGNDLDFL--------AKGIAIGDLDP 319
T ++HL +S D++ LDFL A IA G+L+P
Sbjct: 298 TRKLIHLKPLSQNLLDSLDEKLDFLGPELPSSVAIAIAEGNLNP 341
>gi|302658050|ref|XP_003020735.1| exonuclease, putative [Trichophyton verrucosum HKI 0517]
gi|291184593|gb|EFE40117.1| exonuclease, putative [Trichophyton verrucosum HKI 0517]
Length = 725
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 229/403 (56%), Gaps = 39/403 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P +IK+ G + VD Y WLH+G ++C+ EL G PT++++D+ +
Sbjct: 1 MGISGLHGLLKSIQKPCNIKKFAGQTLGVDAYGWLHRGTIACAYELVLGKPTTKYVDFAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+HYGV P ++FDGG+LP K E RA R+E+ E G ++ +Y+ +Q
Sbjct: 61 GRIRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ + Y+VAPYEAD Q+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G +E +D+S G+T + MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K K+ D+V++ +++ + VPP Y E+F +A LTF HQRV+ P + +V L+ + D
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGSNRVPPGYLENFKRAELTFLHQRVFCPIAKTLVMLNPLPD 300
Query: 300 NI-GNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
G D+ ++ A GIA GDLDP T+ P + LK PE E
Sbjct: 301 GGNGEDMPYIGTLLEPHVAIGIACGDLDPITKEPIE---------------LKRSYPERE 345
Query: 351 R--------------KKLDLPVQKNLLTKKFTTPRISPNHFSP 379
R KK +Q+ K+ + PN +P
Sbjct: 346 RLVRTGRQSITLSDEKKPVREIQEFFTPKRIPLSELDPNSMTP 388
>gi|328877038|gb|EGG25401.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
fasciculatum]
Length = 994
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 219/339 (64%), Gaps = 16/339 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLL I IHIK+ VAVD Y WLHK SCS+ELC+G+PT+R++ YC+
Sbjct: 1 MGITGLLPLLSPIKRNIHIKDYANKRVAVDGYCWLHKAVYSCSQELCQGIPTTRYLQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +++++ + V P+++FDGG LP K E+ R R++ +A EGN + + + +Q
Sbjct: 61 NLISMMKSHKVIPVIVFDGGPLPNKRGTEDDRRSKRQQYKEKANAYLLEGNRAEANKCFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++ +A LI+ L++ + Y+VAPYEADAQ+ +LAV+ QV+A++TEDSDLI +G
Sbjct: 121 KAVDVTTLMAFNLIKELRRLGIEYVVAPYEADAQLAYLAVTNQVDAILTEDSDLIAYGTP 180
Query: 181 RIIFKMDKFGQGVEFQ----CSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
++FKM+K G E + CS K+ L FG F ML +MCIL+GCDYL SL GMG+
Sbjct: 181 TVLFKMNKEGYCEEIKSENICSC--KSNGLDFGNFNLTMLRQMCILAGCDYLPSLHGMGI 238
Query: 237 KRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
K ++ L ++K +K+ K+LK T + Y SF KA LTF+H RVYDP ++ +VH S
Sbjct: 239 KTSYKLFKEYKEIEKIFKYLK-GTKRLTEEYVGSFYKADLTFRHARVYDPVSKTMVHFSP 297
Query: 297 IS-DNIGNDLDFLA--------KGIAIGDLDPFTQLPFQ 326
+ +N+G ++DFL + IA G + P T+ F+
Sbjct: 298 LDEENVGTNMDFLGECIENEIVEKIATGVICPVTRQVFE 336
>gi|346976689|gb|EGY20141.1| exodeoxyribonuclease [Verticillium dahliae VdLs.17]
Length = 805
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/336 (41%), Positives = 214/336 (63%), Gaps = 12/336 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P +K+L G + VD Y WLH+GA++C+ EL +G PT +++D+ M
Sbjct: 1 MGVSGLLPLLKSIHRPTELKKLSGETLGVDAYGWLHRGAIACALELAQGKPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG-NSSASYEFY 119
HRV +LRH+GV P L+FDG LP K E RA+ R ++ +E G NS AS EF
Sbjct: 61 HRVRMLRHFGVTPYLVFDGDFLPSKAMTEGSRAKRRDDSKKLGLELLKAGKNSQASAEF- 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QK++D++P +A LI LK+ +V Y+VAPYEAD+Q+ +L ++ +++EDSDL+ FGC
Sbjct: 120 QKSIDVTPEMARNLIDELKKIHVEYVVAPYEADSQLVYLERQGIIDGILSEDSDLLVFGC 179
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R++ K+D++G +E +++S G+T M ILSGCDYL + MGLK A
Sbjct: 180 KRLLTKLDQYGNCIEINRRDFAACREISLTGWTDAEFRRMAILSGCDYLAGVSNMGLKTA 239
Query: 240 HALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ ++ + K+ +++++ +++ V Y +F KA LTF +QRVY PK +++V L+
Sbjct: 240 YRMVRQHKTPERLVRMMQFEAKHRVSEDYLANFTKAELTFLYQRVYCPKKKELVFLTEPE 299
Query: 299 DNIG-NDLDF--------LAKGIAIGDLDPFTQLPF 325
+ G ND+ F +A+G+A GDL+P T++P
Sbjct: 300 EGQGVNDMPFIGAFVEPTIARGVATGDLNPMTKMPI 335
>gi|449439699|ref|XP_004137623.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 577
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 236/382 (61%), Gaps = 35/382 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS---RHID 57
MGI+ LL +K + PIHIK+ G V +D YSWLH+GA SCS E+C + R+ID
Sbjct: 1 MGIKDLLRFMKPYIEPIHIKKYAGERVGIDAYSWLHRGAYSCSMEICLNSNSDKKWRYID 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
YCMHR+NLLRHY + P+++FDGG +P K +R R +++N A+E EGN +A+ E
Sbjct: 61 YCMHRINLLRHYEIVPVVVFDGGNIPCKAVTHQERHRKKEKNRELAMEKLKEGNVNAASE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLA----VSKQVEAVITEDSD 173
+Q+AV+I+PSIA++LI++L++ ++ ++VAPYEADAQ+ +L+ ++ + AVITEDSD
Sbjct: 121 LFQRAVNITPSIANQLIKLLREHDIEFVVAPYEADAQLAYLSSLGTLNGGIAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL-----SFGGFTKQMLLEMCILSGCDYL 228
+I +GC IFKMD++G G E ML K D SF F K++L MC+L+GCD+L
Sbjct: 181 MIAYGCKATIFKMDRYGNGEEM---MLDKIFDSAGCTPSFKDFDKELLTGMCVLAGCDFL 237
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPK 287
S+PG+G+ RA+AL+SK+++ ++ + LK +P Y + F +A+ FQH ++YD +
Sbjct: 238 PSVPGIGIARAYALVSKYRNLERALSALKLQKKEQMPEDYFKLFRQAMAVFQHAKIYDAE 297
Query: 288 TEDIVHLSCIS----DNIGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSD---NS 332
T ++ + + +G ++DFL A IA G L+P T F S N
Sbjct: 298 TRKLIPMKPLPLELLQVLGEEIDFLGPDMPPSIAVSIAEGRLNPVTMEAFNYFSSEECNQ 357
Query: 333 HLVVGQNSHLKNFKPESERKKL 354
L++ K P +E+ ++
Sbjct: 358 DLIIKN----KEILPRTEKAEV 375
>gi|9719724|gb|AAF97826.1|AC034107_9 Contains similarity to exonuclease ExoI from Xenopus laevis
gb|AF134570 and contains XPG N-terminal PF|00752 and
I-region PF|00867 domains. EST gb|AV565414 comes from
this gene [Arabidopsis thaliana]
Length = 567
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 217/349 (62%), Gaps = 28/349 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LL +K ++PIHI++ G V +D YSWLHKG ++L R+IDY M
Sbjct: 1 MGIKDLLRFMKPYILPIHIQKYAGKRVGIDAYSWLHKGDTDGKKKL-------RYIDYFM 53
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRVNLL+HY + P+++ DGG +P K ++R R RK N A+ EGN +A+ E +Q
Sbjct: 54 HRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRKRKANFDAAMVKLKEGNVAAATELFQ 113
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE-----AVITEDSDLI 175
+AV ++ S+AH+LIQVLK +NV +IVAPYEADAQ+ +L+ S ++E AVITEDSDL+
Sbjct: 114 RAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLS-SLELEQGGIAAVITEDSDLL 172
Query: 176 PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL--SFGGFTKQMLLEMCILSGCDYLQSLPG 233
+GC +IFKMD++G+G E + + D SF F +++ MC+L+GCD+L S+PG
Sbjct: 173 AYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPSVPG 232
Query: 234 MGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
+G+ RAHA ISK++S + V+ LK VP Y SF +AV FQH RVYD + +
Sbjct: 233 VGISRAHAFISKYQSVELVLSFLKTKKGKLVPDDYSSSFTEAVSVFQHARVYDFDAKKLK 292
Query: 293 HLSCISDNIGN----DLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
HL +S N+ N L+FL A IA G++DP T F S
Sbjct: 293 HLKPLSHNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 341
>gi|315047586|ref|XP_003173168.1| exodeoxyribonuclease 1 [Arthroderma gypseum CBS 118893]
gi|311343554|gb|EFR02757.1| exodeoxyribonuclease 1 [Arthroderma gypseum CBS 118893]
Length = 722
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 230/395 (58%), Gaps = 23/395 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P IK+ G + VD Y WLH+G ++C+ EL G PT++++D+ +
Sbjct: 1 MGISGLHGLLKSIQKPCSIKKFAGQTLGVDAYGWLHRGTIACAYELVLGKPTTKYVDFAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+H+GV P ++FDGG+LP K E RA R+E+ E G ++ +Y+ +Q
Sbjct: 61 GRIRMLQHHGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTAEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ + Y+VAPYEAD Q+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G +E +D+S G+T + MCILSGCDYL ++P +GLK A+
Sbjct: 181 RLLSKLDKNGDCIEINRGDFTACRDISLIGWTDENFRHMCILSGCDYLANIPKIGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K K+ D+V+K +++ + VPP Y ++F +A LTF HQRV+ P T+ +V L+ + D
Sbjct: 241 RSIRKHKTVDRVVKMIQFDGSNRVPPGYLDNFNRAELTFLHQRVFCPTTKALVMLNPLRD 300
Query: 300 NI-GNDLDFLAK--------GIAIGDLDPFTQLPFQ---EVSDNSHLV-VGQNS--HLKN 344
G D+ ++ GIA GDLDP T+ P + + LV G+ S L
Sbjct: 301 GGNGEDMPYIGAILEPHITIGIAYGDLDPITKEPIEIKRSYPERERLVRTGRQSITSLDE 360
Query: 345 FKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
KP E +Q+ K+ + PN +P
Sbjct: 361 KKPVRE-------IQEFFTPKRVPLSELDPNSMTP 388
>gi|326478646|gb|EGE02656.1| exodeoxyribonuclease [Trichophyton equinum CBS 127.97]
Length = 725
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 230/392 (58%), Gaps = 17/392 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P +IK+ G + VD Y WLH+G ++C+ EL G PT++++D+ +
Sbjct: 1 MGISGLHGLLKSIQKPCNIKKFAGQTLGVDAYGWLHRGTIACAYELVLGKPTTKYVDFAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+HYGV P ++FDGG+LP K E RA R+E+ E G ++ +Y+ +Q
Sbjct: 61 GRIRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ + Y+VAPYEAD Q+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G +E +D+S G+T + MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLANIPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K K+ D+V++ +++ + VPP Y ++F +A LTF HQRV+ P + +V L+ + D
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGSNRVPPGYLDNFKRAELTFLHQRVFCPIAKALVTLNPLPD 300
Query: 300 NI-GNDLDFL--------AKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFKP 347
G D+ ++ A GIA GDLDP T+ P + + LV + +
Sbjct: 301 GGNGEDMPYIGALLVPHVAIGIACGDLDPITKEPIEIKRSYPERERLVRTGRQSITS--- 357
Query: 348 ESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
S+ KK +Q+ K+ + PN +P
Sbjct: 358 -SDEKKPVREIQEFFTPKRIPLSELDPNSMTP 388
>gi|326470462|gb|EGD94471.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 725
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 230/392 (58%), Gaps = 17/392 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P +IK+ G + VD Y WLH+G ++C+ EL G PT++++D+ +
Sbjct: 1 MGISGLHGLLKSIQKPCNIKKFAGQTLGVDAYGWLHRGTIACAYELVLGKPTTKYVDFAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+HYGV P ++FDGG+LP K E RA R+E+ E G ++ +Y+ +Q
Sbjct: 61 GRIRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ + Y+VAPYEAD Q+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G +E +D+S G+T + MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLANIPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K K+ D+V++ +++ + VPP Y ++F +A LTF HQRV+ P + +V L+ + D
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGSNRVPPGYLDNFKRAELTFLHQRVFCPIAKALVTLNPLPD 300
Query: 300 NI-GNDLDFL--------AKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFKP 347
G D+ ++ A GIA GDLDP T+ P + + LV + +
Sbjct: 301 GGNGEDMPYIGALLVPHVAIGIACGDLDPITKEPIEIKRSYPERERLVRTGRQSITS--- 357
Query: 348 ESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
S+ KK +Q+ K+ + PN +P
Sbjct: 358 -SDEKKPVREIQEFFTPKRIPLSELDPNSMTP 388
>gi|452838210|gb|EME40151.1| hypothetical protein DOTSEDRAFT_158847, partial [Dothistroma
septosporum NZE10]
Length = 687
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 232/395 (58%), Gaps = 22/395 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSI P H++ G + VD Y WLH+G +SC+ EL +G PT +HID+ +
Sbjct: 1 MGIQGLLPLLKSIHKPTHLRNFSGQTLGVDAYGWLHRGTVSCAIELAEGKPTRKHIDFAL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GVKP ++FDG LP K E++RA RKE+ +E G S ++ Q
Sbjct: 61 HRVRMLIHFGVKPYIVFDGDYLPSKAHTESERAARRKESKRMGLELLRMGRPSQAHLELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A ELI+ LK+ V Y+VAPYEAD+Q+ +L ++ VI+EDSDL+ FG
Sbjct: 121 KAVDVTPVMARELIEELKRLEVPYVVAPYEADSQLAYLEKQGMIDGVISEDSDLLVFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D++G+ V + +++S G++ + M +LSGCDYL + MGLK A+
Sbjct: 181 CLLTKLDQYGECVMINRADFTSCREVSLVGWSDKEFRMMAMLSGCDYLPGIDKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K K+ D+V++ +++ + VP Y E+F KA TF HQ V+ P+ + +++L + +
Sbjct: 241 RLVRKHKTVDRVVRTVQFDGKMKVPAGYLEAFQKAERTFMHQWVFCPQAQCLLNLDALPE 300
Query: 300 N--------IGNDLD-FLAKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFKP 347
IG ++ LA G+A GDLDP T+ P Q D + +H + +
Sbjct: 301 GLEAASIPYIGEHVNPGLAAGVARGDLDPNTKQPIQLPDRFQDRAR------THSRTVQT 354
Query: 348 ESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEET 382
+E+K + K+ + PN F+P T
Sbjct: 355 PNEKKGTPI---TEFFKKRTPLAELDPNSFTPSPT 386
>gi|356522842|ref|XP_003530052.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 575
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 217/347 (62%), Gaps = 22/347 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR---HID 57
MGI+ LL +K + P+HIK+ G V +D YSWLHKGA SCS ELC + R +ID
Sbjct: 1 MGIKDLLRFMKPYIEPVHIKKYAGKRVGIDAYSWLHKGAYSCSMELCLDSNSERKLRYID 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
Y MHRVNLLR Y + P+++FDG +P K E +R R R+ N A+ EGN A+ E
Sbjct: 61 YFMHRVNLLRFYKITPVVVFDGCNVPCKAATEEERNRKRRANRELAMAKLKEGNVGAASE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV----SKQVEAVITEDSD 173
+Q+AV I+P +AH+LIQ LK + + ++VAPYEADAQ+ +++ + V AVITEDSD
Sbjct: 121 LFQRAVSITPVMAHKLIQTLKSEKIEFVVAPYEADAQLAYMSQLGVENGGVAAVITEDSD 180
Query: 174 LIPFGCSRIIFKMDKFGQG--VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
LI +GC IIFKMD+ G G +E + ++ SF F ++L MC+L+GCD+L S+
Sbjct: 181 LIAYGCPAIIFKMDRHGNGERIELEKVFSAESGRPSFRSFNMKLLTGMCVLAGCDFLPSV 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+G+ RAHAL+SK+++ D+++ LK +P Y +SF +AV F+H ++YD +++
Sbjct: 241 PGIGIARAHALVSKYRNLDRILSVLKIEKGDQMPEDYAKSFQEAVAVFEHAQIYDVNSKE 300
Query: 291 IVHLSCISDN----IGNDLDFLA--------KGIAIGDLDPFTQLPF 325
+ H++ + +N + DFL IA G+L+P T+ F
Sbjct: 301 LKHMNPLPENFLGSLDGKFDFLGPEIPPSIVTAIAEGNLNPSTKKAF 347
>gi|449503133|ref|XP_004161850.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 578
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 236/383 (61%), Gaps = 36/383 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS---RHID 57
MGI+ LL +K + PIHIK+ G V +D YSWLH+GA SCS E+C + R+ID
Sbjct: 1 MGIKDLLRFMKPYIEPIHIKKYAGERVGIDAYSWLHRGAYSCSMEICLNSNSDKKWRYID 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE-NLARAIECESEGNSSASY 116
YCMHR+NLLRHY + P+++FDGG +P K +R R +KE N A+E EGN +A+
Sbjct: 61 YCMHRINLLRHYEIVPVVVFDGGNIPCKAVTHQERHRYKKEKNRELAMEKLKEGNVNAAS 120
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLA----VSKQVEAVITEDS 172
E +Q+AV+I+PSIA++LI++L++ ++ ++VAPYEADAQ+ +L+ ++ + AVITEDS
Sbjct: 121 ELFQRAVNITPSIANQLIKLLREHDIEFVVAPYEADAQLAYLSSLGTLNGGIAAVITEDS 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL-----SFGGFTKQMLLEMCILSGCDY 227
D+I +GC IFKMD++G G E ML K D SF F K++L MC+L+GCD+
Sbjct: 181 DMIAYGCKATIFKMDRYGNGEEM---MLDKIFDSAGCTPSFKDFDKELLTGMCVLAGCDF 237
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDP 286
L S+PG+G+ RA+AL+SK+++ ++ + LK +P Y + F +A+ FQH ++YD
Sbjct: 238 LPSVPGIGIARAYALVSKYRNLERALSALKLQKKEQMPEDYFKLFRQAMAVFQHAKIYDA 297
Query: 287 KTEDIVHLSCIS----DNIGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSD---N 331
+T ++ + + +G ++DFL A IA G L+P T F S N
Sbjct: 298 ETRKLIPMKPLPLELLQVLGEEIDFLGPDMPPSIAVSIAEGRLNPVTMEAFNYFSSEECN 357
Query: 332 SHLVVGQNSHLKNFKPESERKKL 354
L++ K P +E+ ++
Sbjct: 358 QDLIIKN----KEILPRTEKAEV 376
>gi|327306443|ref|XP_003237913.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326460911|gb|EGD86364.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 725
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 229/403 (56%), Gaps = 39/403 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++K+ G + VD Y WLH+G ++C+ EL G PT++++D+ +
Sbjct: 1 MGISGLHGLLKSIQKPCNVKKFAGQTLGVDAYGWLHRGTIACAYELVLGKPTTKYVDFAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+HYGV P ++FDGG+LP K E RA R+E+ E G ++ +Y+ +Q
Sbjct: 61 GRIRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ + Y+VAPYEAD Q+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G +E +D+S G+T + MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K K+ D+V++ +++ + VPP Y ++F +A LTF HQRV+ P + +V L+ + D
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGSNRVPPGYLDNFKRAELTFLHQRVFCPIAKALVMLNPLPD 300
Query: 300 -NIGNDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
G D+ ++ A GIA GDLDP T+ P S +K PE E
Sbjct: 301 GGNGEDMPYIGTLLEPHVAIGIACGDLDPITKEP---------------SEIKRSYPERE 345
Query: 351 R--------------KKLDLPVQKNLLTKKFTTPRISPNHFSP 379
R KK +Q+ K+ + PN +P
Sbjct: 346 RLVRTGRQSITSSDEKKPVREIQEFFTPKRIPLSELDPNSMTP 388
>gi|299742153|ref|XP_001832288.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
gi|298405054|gb|EAU89661.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 218/369 (59%), Gaps = 19/369 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK I + EL G +AVD Y WLHKG SC+ +L G T+R+++Y M
Sbjct: 1 MGITGLLPALKPIQNTKTLAELSGKTIAVDAYVWLHKGVYSCATDLALGKSTTRYVNYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV++LRH+ ++P ++FDGG LP K E++R + R+ENLA+ ++G + + + +
Sbjct: 61 DRVHMLRHFKIEPYIVFDGGPLPAKKGTESERKKKREENLAKGKALVAQGRHTQARDCFN 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +D++P +A++LI+ L+ + V Y+VAPYEADAQ+ +L V+ ++TEDSDL+ FGC
Sbjct: 121 KCIDVTPQMAYQLIKKLRAEGVQYLVAPYEADAQLAYLERIGLVDGILTEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGV------EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ FK D V +F S++ D+ G+T M ILSGCDYL S+PG+
Sbjct: 181 SVFFKFDSTNYTVVSIERKDF-ASVVPPRSDIHLAGWTDVQFRSMAILSGCDYLPSIPGI 239
Query: 235 GLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
GLK A L+ K+K+ + V+KHL + VPP Y E + A FQHQ+VY P E +V
Sbjct: 240 GLKTACNLLRKYKTAEAVVKHLIFEGKKKVPPGYLEQYHFAEKCFQHQKVYCPLQEKLVP 299
Query: 294 LSCI--------SDNIGNDLD-FLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKN 344
L + D G DLD LAK +A+GD+DP T LP ++ N + G H
Sbjct: 300 LYPVPADWTQEYEDYCGGDLDPALAKKLAMGDVDPHTLLPMNDI--NPGFLPGSKKHAAA 357
Query: 345 FKPESERKK 353
KP S + K
Sbjct: 358 TKPVSHKGK 366
>gi|320035457|gb|EFW17398.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 736
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 232/392 (59%), Gaps = 18/392 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++K+ +G + VD Y WLH+G+++ + +L T ++D+ M
Sbjct: 1 MGIAGLHSLLKSIQKPCNVKKFKGQTLGVDAYGWLHRGSVAFALDLALNRQTIGYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L +YGV P L+FDGG LP K E RA R+E+ +E G +S + + Q
Sbjct: 61 HRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ NV YIVAPYEADAQ+ +L V +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DK G +E S +D+S G+T + +MCILSGCDYL ++P +GLK A+
Sbjct: 181 VLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ ++K+ +KV+K +++ S VPP Y E F +A LTF HQRV+ P+ +V L+ + +
Sbjct: 241 RKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFNRAELTFLHQRVFCPRARKLVTLNPLPN 300
Query: 300 N-------IGNDLDF-LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK----P 347
+ IGND++ +A GIA GDLDP TQ + + N + + + N + P
Sbjct: 301 SAHEGLTFIGNDIEPDIAIGIACGDLDPITQ---EVIKINPSYP--ERARMANMRRGTLP 355
Query: 348 ESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
++ K D P+ K+ + PN +P
Sbjct: 356 LADEKGQDKPISSFFTPKRIPLGELDPNSLTP 387
>gi|303315399|ref|XP_003067707.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107377|gb|EER25562.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 736
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 232/392 (59%), Gaps = 18/392 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++K+ +G + VD Y WLH+G+++ + +L T ++D+ M
Sbjct: 1 MGIAGLHSLLKSIQKPCNVKKFKGQTLGVDAYGWLHRGSVAFALDLALNRQTIGYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L +YGV P L+FDGG LP K E RA R+E+ +E G +S + + Q
Sbjct: 61 HRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ NV YIVAPYEADAQ+ +L V +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DK G +E S +D+S G+T + +MCILSGCDYL ++P +GLK A+
Sbjct: 181 VLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ ++K+ +KV+K +++ S VPP Y E F +A LTF HQRV+ P+ +V L+ + +
Sbjct: 241 RKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFNRAELTFLHQRVFCPRARKLVTLNPLPN 300
Query: 300 N-------IGNDLDF-LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK----P 347
+ IGND++ +A GIA GDLDP TQ + + N + + + N + P
Sbjct: 301 SAHEGLTFIGNDIEPDIAIGIACGDLDPITQ---EVIKINPSYP--ERARMANMRRGTLP 355
Query: 348 ESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
++ K D P+ K+ + PN +P
Sbjct: 356 LADEKGQDKPISSFFTPKRIPLGELDPNSLTP 387
>gi|296804836|ref|XP_002843266.1| exodeoxyribonuclease 1 [Arthroderma otae CBS 113480]
gi|238845868|gb|EEQ35530.1| exodeoxyribonuclease 1 [Arthroderma otae CBS 113480]
Length = 729
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 209/336 (62%), Gaps = 10/336 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++K+ G + VD Y WLH+G +C+ E+ G PT++++D+ +
Sbjct: 1 MGITGLHGLLKSIQKPCNVKKFAGQTLGVDAYGWLHRGTAACAYEIALGRPTTKYVDFTI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+HYG+ P ++FDGG+LP K E RA R+E+ E G ++ +Y+ +Q
Sbjct: 61 GRLRMLQHYGITPYIVFDGGMLPSKEAIEASRAARREESRKLGEEHMRRGRTAEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ + Y+VAPYEAD Q+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G +E +D+S G+T + MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDKNGDCIEINRGDFAACRDISLIGWTDENFRHMCILSGCDYLTNIPRMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K KS D+V+K +++ S VPP Y ESF +A LTF HQRV+ P + +V L+ + D
Sbjct: 241 RSIRKHKSVDRVVKMVQFDGSSRVPPGYLESFKRAELTFLHQRVFCPTAKCLVMLNPLPD 300
Query: 300 NI-GNDLDF--------LAKGIAIGDLDPFTQLPFQ 326
G D+ F +A IA GDLDP T+ P +
Sbjct: 301 GGNGEDMPFVGAILDPDVAIAIACGDLDPMTKEPIE 336
>gi|154294321|ref|XP_001547602.1| hypothetical protein BC1G_13933 [Botryotinia fuckeliana B05.10]
Length = 768
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P ++K+ EG + VD Y WLH+G +SC+ +L G PT ++++YCM
Sbjct: 1 MGISGLLPLLKSIQKPCNLKKFEGKTLGVDAYGWLHRGTVSCAMDLAMGKPTRKYVEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GV P LIFDG LP K E R + RK++ E + G +S +Y +Q
Sbjct: 61 HRVRMLLHFGVTPYLIFDGDYLPSKAATEKDREKRRKDSKRLGQELLNAGKTSQAYLEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +I LK+ V Y+VAPYEADAQM +L ++ +++EDSDL+ FG
Sbjct: 121 KAVDVTPEMARHVIDELKEMGVQYVVAPYEADAQMVYLERKGVIDGILSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D++G +E + KD++ G++ M ILSGCDYL S+ MGLK A+
Sbjct: 181 CLLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAILSGCDYLPSMSNMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV-----HL 294
LI K K+ +KV++ +++ VP Y ESF +A TF HQRV+ P++ +V L
Sbjct: 241 RLIRKHKTIEKVLRMIQFDGKFHVPKNYLESFYQAEFTFLHQRVFCPQSLTLVLHTQPDL 300
Query: 295 SCISDN---IGND-LDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKN 344
D IG+D L +A+G+A GDL+P T+ P ++ G+ S + N
Sbjct: 301 PLTEDQTQFIGHDVLPEIAQGVAKGDLNPITKQP---------IITGRRSKMAN 345
>gi|347827667|emb|CCD43364.1| similar to exonuclease [Botryotinia fuckeliana]
Length = 768
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P ++K+ EG + VD Y WLH+G +SC+ +L G PT ++++YCM
Sbjct: 1 MGISGLLPLLKSIQKPCNLKKFEGKTLGVDAYGWLHRGTVSCAMDLAMGKPTRKYVEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GV P LIFDG LP K E R + RK++ E + G +S +Y +Q
Sbjct: 61 HRVRMLLHFGVTPYLIFDGDYLPSKAATEKDREKRRKDSKRLGQELLNAGKTSQAYLEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +I LK+ V Y+VAPYEADAQM +L ++ +++EDSDL+ FG
Sbjct: 121 KAVDVTPEMARHVIDELKEMGVQYVVAPYEADAQMVYLERKGVIDGILSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D++G +E + KD++ G++ M ILSGCDYL S+ MGLK A+
Sbjct: 181 CLLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAILSGCDYLPSMSNMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV-----HL 294
LI K K+ +KV++ +++ VP Y ESF +A TF HQRV+ P++ +V L
Sbjct: 241 RLIRKHKTIEKVLRMIQFDGKFHVPKNYLESFYQAEFTFLHQRVFCPQSLTLVLHTQPDL 300
Query: 295 SCISDN---IGND-LDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKN 344
D IG+D L +A+G+A GDL+P T+ P ++ G+ S + N
Sbjct: 301 PLTEDQTQFIGHDVLPEIAQGVAKGDLNPITKQP---------IITGRRSKMAN 345
>gi|340966712|gb|EGS22219.1| 5'->3' double-stranded DNA exonuclease-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 743
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 207/332 (62%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSI P +K G + VD Y WLH+GA++C+ EL +G PT +++D+ M
Sbjct: 1 MGIQGLLPLLKSIQRPTELKRYAGETLGVDGYGWLHRGAVACAIELAQGKPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + R++GV P ++FDG LP K + E R + R+E +E G S ++ Q
Sbjct: 61 HRVKMFRYFGVTPYIVFDGDFLPSKAKTEESRKKRREEAKKVGLELLRAGKPSLAFNELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A LI+ LK+++V Y+VAPYEADAQ+ +L + +++EDSDL+ FG
Sbjct: 121 KAIDVTPEMARHLIEELKKEDVPYVVAPYEADAQLVYLERKGIISGIVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ GQ VE +++S G+T M I SGCDYL+ L +GLK A+
Sbjct: 181 RLLTKLDQHGQCVEINRKDFCLVREISLTGWTDSEFRHMAIFSGCDYLEGLSNIGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
LI K K+ D+++K L++ VP Y E F +A LTF HQRV+ P+ +DIV L+
Sbjct: 241 RLIRKHKTPDRIVKMLRFDGKYQVPQNYLEEFKQAELTFLHQRVFCPEKKDIVFLTEPDP 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ 322
+ IG ++ LA+ IA+GD++P T+
Sbjct: 301 SLNIDEMPYIGAPIETELARAIAVGDVNPITK 332
>gi|116203679|ref|XP_001227650.1| hypothetical protein CHGG_09723 [Chaetomium globosum CBS 148.51]
gi|88175851|gb|EAQ83319.1| hypothetical protein CHGG_09723 [Chaetomium globosum CBS 148.51]
Length = 1331
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 204/332 (61%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI PI +K+ G VD Y WLH+GA++C+ EL +G PT +++D+ M
Sbjct: 1 MGISGLLPLLKSIHRPIELKKYAGETFGVDAYGWLHRGAVACAMELAQGKPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + +++GV P L+FDG LP K + E R++ R+E +E G S +Y Q
Sbjct: 61 HRVRMFKYFGVTPYLVFDGDFLPSKAKTEASRSKRREETRKAGLELLKAGKPSQAYVELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A LI+ LK+ +V Y+VAPYEADAQM +L + +++EDSDL+ FG
Sbjct: 121 KAIDVTPEMARHLIEELKKADVPYVVAPYEADAQMVYLERQGLISGIVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ KMD+ G +E +++S G+T M I SGCDYL + +GLK A+
Sbjct: 181 RLLTKMDQHGHCIEINRRDFCAVREISLTGWTDNEFRHMAIFSGCDYLDGVNNIGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
LI K K+ ++++K L++ +P Y + F +A LTF HQRV+ PK DIV L+
Sbjct: 241 RLIRKHKTPERIVKMLRFDGKHQIPETYLQDFKQAELTFLHQRVFCPKKRDIVLLTDPEP 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQ 322
++ +D+ F +A+ IA GD++P T+
Sbjct: 301 SVNVDDMPFIGAPVETEMARSIAAGDVNPITK 332
>gi|402080689|gb|EJT75834.1| exonuclease 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 813
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 210/332 (63%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI +K+ G +AVD Y WLH+GA+SC+ EL +G PT R++D+ M
Sbjct: 1 MGISGLLPLLKSIHKQTELKKFSGETLAVDAYGWLHRGAVSCALELAQGKPTRRYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +++H+G P L+FDG LP K E+ RA+ R+++ +E G + +Y+ +Q
Sbjct: 61 HRVRMVKHFGAVPYLVFDGDFLPSKAMTESSRAKRREDSKKAGMELLKAGKPAQAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A LI+ LK+ ++ Y+VAPYEADAQM +L V +I+EDSDL+ FG
Sbjct: 121 KAIDVTPEMARNLIEELKKADLPYVVAPYEADAQMVYLERHGYVSGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D++GQ +E +++S G+T +M I SGCDYL L GMGLK A+
Sbjct: 181 RLLTKLDQYGQCIEINRRDFCSVREISLTGWTDAEFRQMAIFSGCDYLDGLSGMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+I K K+ +K+IK +++ V Y SF +A +TF HQRVY P+ + +V L+ +
Sbjct: 241 RMIRKHKTPEKIIKVMQFEGKRRVSENYLASFKQAEITFLHQRVYCPEKKQLVLLTEPTS 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ 322
IG +D +A+ IA+GD++P T+
Sbjct: 301 GLDVEEMPFIGGKVDPEMARAIAVGDVNPITK 332
>gi|336467245|gb|EGO55409.1| hypothetical protein NEUTE1DRAFT_147941 [Neurospora tetrasperma
FGSC 2508]
gi|350288128|gb|EGZ69364.1| hypothetical protein NEUTE2DRAFT_94431 [Neurospora tetrasperma FGSC
2509]
Length = 758
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 232/394 (58%), Gaps = 21/394 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +++ G + +D Y WLH+GA++C+ +L +G PT +++DY M
Sbjct: 1 MGINGLLPLLKSIHRPAELRKYAGETLGIDGYGWLHRGAIACAIDLAQGKPTRKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMK----IEQENKRARSRKENLARAIECESEGNSSASY 116
HRV + +H+GV P ++FDG LP K +++EN+R SRK L E G S ++
Sbjct: 61 HRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRENRREVSRKTGL----ELLKAGKPSQAH 116
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
QKA+DI+P +A LI LK+ NV Y+VAPYEADAQ+ +L + +++EDSDL+
Sbjct: 117 IELQKAIDITPEMARHLIDELKKANVPYVVAPYEADAQLIYLERRGIISGIVSEDSDLLV 176
Query: 177 FGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
FG R++ KMD++GQ +E S +++S G++ +M I SGCDYL SLP MGL
Sbjct: 177 FGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCDYLDSLPSMGL 236
Query: 237 KRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
+ A+ +I K K+ ++++K L++ + VP Y F +A LTF +QRV+ P+ + +V L+
Sbjct: 237 RTAYRMIRKLKTPERIVKKLQFDGKIRVPDDYLARFKQAELTFIYQRVFCPEKQAVVCLT 296
Query: 296 CISDNIG-NDLDF--------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK 346
++I +D+ + LA+ IA+GD++P T+ P + + F
Sbjct: 297 EPDESINVDDMPYIGAPIDAKLARAIAVGDVNPITKEPIIVTATSPSKRRISQVFTSAF- 355
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSPE 380
E KK+ P+ + ++ + PN F+ E
Sbjct: 356 --GEGKKMGKPIDQYFKDRRIPLGEMDPNCFNVE 387
>gi|367031744|ref|XP_003665155.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
gi|347012426|gb|AEO59910.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
Length = 760
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 210/332 (63%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +K+ G + VD Y WLH+GA++C+ EL +G PT +++D+ M
Sbjct: 1 MGISGLLPLLKSIHRPTELKKYAGETLGVDGYGWLHRGAVACAIELAQGKPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + +++GV P ++FDG LP K + E R++ R+E+ +E G S +Y Q
Sbjct: 61 HRVRMFKYFGVTPYVVFDGDFLPSKAKTEAARSKRREESKRIGLELLRAGKPSQAYSELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A LI+ LK+ +V Y+VAPYEADAQ+ +L + +++EDSDL+ FG
Sbjct: 121 KAIDVTPEMARHLIEELKKADVPYVVAPYEADAQLVYLERQGLISGIVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ GQ VE +++S G+T + M ILSGCDYL + +GLK A+
Sbjct: 181 RLLTKLDQHGQCVEINRRDFCAVREISLTGWTDREFRHMAILSGCDYLDGVSNIGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K K+ +++IK L++ +P Y E F +A LTF HQRV+ PK +DIV L+ +
Sbjct: 241 RLVRKHKTPERIIKMLRFDGKHQIPDSYLEDFKQAELTFLHQRVFCPKKQDIVFLTELDP 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ 322
+ IG ++ LA+ IAIGD++P T+
Sbjct: 301 SSNPDEMRFIGAPVETELARSIAIGDVNPITK 332
>gi|66802930|ref|XP_635308.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
discoideum AX4]
gi|74851348|sp|Q54ED2.1|EXO1_DICDI RecName: Full=Exonuclease 1
gi|60463584|gb|EAL61769.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1046
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 189/288 (65%), Gaps = 2/288 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L + IH+K+ VA+D YSWLHKGA SCS+E+ G+PT +I+Y +
Sbjct: 1 MGISGLLPALSPVTKAIHVKDYANKRVAIDGYSWLHKGAYSCSQEIVLGIPTRNYINYFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L Y V P++IFDGG LP K +E +R R R+E +A EGN S + +Q
Sbjct: 61 SRIKMLISYKVIPVVIFDGGPLPNKKLKEQERLRHREEYKNKAKAYLLEGNKSQANICFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVDI+P +A LI+ L+ V Y+VAPYEADAQ+T+L+++ QV+A+ITEDSDL+ FG +
Sbjct: 121 KAVDITPRMAFLLIKELRALKVEYLVAPYEADAQLTYLSITGQVDAIITEDSDLVAFGAT 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQ--KNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
IIFKMDK+G E + L K F F + ML +MCILSGCDYL SL GMGLK
Sbjct: 181 HIIFKMDKYGYAQEIKTEDLGSCKKDGYDFIDFNQTMLRQMCILSGCDYLPSLSGMGLKT 240
Query: 239 AHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
+ L+ + + +KV K+LK + YE+ F KA TF+HQRV+DP
Sbjct: 241 SFKLLKQHRDIEKVFKYLKREKSNFSQEYEQQFYKADFTFKHQRVFDP 288
>gi|85092799|ref|XP_959551.1| hypothetical protein NCU06089 [Neurospora crassa OR74A]
gi|28920991|gb|EAA30315.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 758
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 227/390 (58%), Gaps = 13/390 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +++ G + +D Y WLH+GA++C+ +L +G PT +++DY M
Sbjct: 1 MGINGLLPLLKSIHRPAELRKYAGETLGIDGYGWLHRGAIACAIDLAQGKPTRKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + +H+GV P ++FDG LP K + E R R+ + +E G S ++ Q
Sbjct: 61 HRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRESRREASRKTGLELLKAGKPSQAHIELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+DI+P +A LI LK+ NV Y+VAPYEADAQ+ +L + +++EDSDL+ FG
Sbjct: 121 KAIDITPEMARHLIDELKKANVPYVVAPYEADAQLIYLERRGIISGIVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ KMD++GQ +E S +++S G++ +M I SGCDYL SLP MGL+ A+
Sbjct: 181 RLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCDYLDSLPSMGLRTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+I K K+ ++++K L++ + VP Y F +A LTF +QRV+ P+ + +V L+
Sbjct: 241 RMIRKLKTPERIVKKLQFDGKIRVPADYLARFKQAELTFIYQRVFCPEKQAVVCLTEPDK 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
+I +D+ + LA+ IA+GD++P T+ P + + F E
Sbjct: 301 SINVDDMPYIGAPIDAKLARAIAVGDVNPITKEPIIVTATSPSKRRISQVFTSAF---GE 357
Query: 351 RKKLDLPVQKNLLTKKFTTPRISPNHFSPE 380
KK+ P+ + ++ + PN F+ E
Sbjct: 358 GKKMGKPIDQYFKDRRIPLGEMDPNCFNVE 387
>gi|367048059|ref|XP_003654409.1| hypothetical protein THITE_2117416 [Thielavia terrestris NRRL 8126]
gi|347001672|gb|AEO68073.1| hypothetical protein THITE_2117416 [Thielavia terrestris NRRL 8126]
Length = 760
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 209/332 (62%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +K+ G VD Y WLH+GA++C+ EL +G PT +++D+ M
Sbjct: 1 MGISGLLPLLKSIHRPTELKKYAGETFGVDGYGWLHRGAVACAIELAQGKPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + +++GV P L+FDG +LP K + E RA+ R+E+ +E G S +Y Q
Sbjct: 61 HRVRMFKYFGVTPYLVFDGDMLPSKAKTEASRAKRREESKRIGLELLRAGKPSQAYAELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A LI+ LK++ V Y+VAPYEADAQ+ +L + +++EDSDL+ FG
Sbjct: 121 KAIDVTPEMARHLIEELKKEEVPYVVAPYEADAQLVYLERQGLISGIVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ GQ VE +++S G+T M ILSGCDYL+ L +GLK A+
Sbjct: 181 RLLTKLDQHGQCVEINRRDFCAVREISLTGWTDSEFRHMAILSGCDYLEGLNNIGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
LI K K+ ++V++ L++ VP Y E F +A LTF +QRV+ P+ +DIV L+
Sbjct: 241 RLIRKHKTPERVVRMLRFEGKHQVPENYLEDFQQAELTFLYQRVFCPRKQDIVLLTEPGP 300
Query: 300 NIGND-LDF--------LAKGIAIGDLDPFTQ 322
++ D + F +A+ IA+GD++P T+
Sbjct: 301 SVNVDEMPFIGAPIETEMARSIAVGDVNPITR 332
>gi|392868930|gb|EAS30280.2| exonuclease [Coccidioides immitis RS]
Length = 736
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 210/331 (63%), Gaps = 9/331 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++K+ +G + VD Y WLH+G+++ + +L T ++D+ M
Sbjct: 1 MGIAGLHSLLKSIQKPCNVKKFKGQTLGVDAYGWLHRGSVAFALDLALNHQTIGYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L +YGV P L+FDGG LP K E RA R+E+ +E G +S + + Q
Sbjct: 61 HRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A LI+ LK+ NV YIVAPYEADAQ+ +L V +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DK G +E S +D+S G+T + +MCILSGCDYL ++P +GLK A+
Sbjct: 181 VLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ ++K+ +KV+K +++ S VPP Y E F +A LTF HQRV+ P+ +V L+ + +
Sbjct: 241 RKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFKRAELTFLHQRVFCPRARKLVTLNPLPN 300
Query: 300 N-------IGNDLDF-LAKGIAIGDLDPFTQ 322
+ IGND++ +A GIA GDLDP TQ
Sbjct: 301 SAHEGLTFIGNDIEPDIAIGIACGDLDPITQ 331
>gi|389641011|ref|XP_003718138.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|351640691|gb|EHA48554.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|440475111|gb|ELQ43812.1| exonuclease 1 [Magnaporthe oryzae Y34]
gi|440490176|gb|ELQ69760.1| exonuclease 1 [Magnaporthe oryzae P131]
Length = 780
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 210/332 (63%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +K+ G +AVD Y WLH+GA+SC+ EL +G PT +++D+ M
Sbjct: 1 MGIVGLLPLLKSIQRPTELKKFAGETLAVDAYGWLHRGAVSCALELAQGKPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +++++G P ++FDG LP K E RA+ R+E+ +E G + +Y+ +Q
Sbjct: 61 HRVRMVKYFGATPYIVFDGDFLPSKALTEASRAKRREESKKAGMELLKAGKPAQAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A ELI+ LK+ +V Y+VAPYEADAQM +L + V +I+EDSDL+ FG
Sbjct: 121 KAIDVTPEMARELIEELKKIDVPYVVAPYEADAQMVYLERNGYVSGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ GQ +E +++S G+T +M I SGCDYL + MGLK A+
Sbjct: 181 RLLTKLDQHGQCIEVNRREFCAVREISLTGWTDAEFRQMAIFSGCDYLDGINKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+I K K+ +KVI+ L++ + Y +F +A LTF HQRV+ P+ +++V L+ +
Sbjct: 241 RMIRKHKTPEKVIRQLQFEGKHKISENYLAAFKQAELTFMHQRVFCPEKQELVLLTEPTS 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ 322
IG +D L++ IA GD++P T+
Sbjct: 301 GLDVEEMPFIGAKVDPELSRAIACGDVNPITK 332
>gi|380088926|emb|CCC13206.1| putative EXO1 protein [Sordaria macrospora k-hell]
Length = 748
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 207/332 (62%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +++ G + +D Y WLH+GA++C+ +L +G PT +++DY M
Sbjct: 1 MGINGLLPLLKSIHRPTELRKYAGETLGIDGYGWLHRGAIACAIDLAQGKPTRKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + +H+GV P ++FDG LP K + E R R+ + +E G S ++ Q
Sbjct: 61 HRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRDNRREASRRTGLELLKAGKPSQAHIELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+DI+P +A LI LK+ +V Y+VAPYEADAQ+ +L + V++EDSDL+ FG
Sbjct: 121 KAIDITPEMARHLIDELKKADVPYVVAPYEADAQLIYLERQGIISGVVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ KMD++GQ +E S +++S G+T M I SGCDYL SLP MGLK A+
Sbjct: 181 RLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCDYLDSLPSMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+I K K+ ++++K L++ + VP Y E F +A LTF +QRV+ P + +V L+ +
Sbjct: 241 RMIRKLKTPERIVKKLQFDGKIRVPDDYLERFKQAELTFIYQRVFCPVKQAVVCLTEPDE 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQ 322
+I +D+ + LA+ IA GD++P T+
Sbjct: 301 SINVDDMPYIGAPIDAKLARAIAAGDVNPITK 332
>gi|398390271|ref|XP_003848596.1| hypothetical protein MYCGRDRAFT_63697, partial [Zymoseptoria
tritici IPO323]
gi|339468471|gb|EGP83572.1| hypothetical protein MYCGRDRAFT_63697 [Zymoseptoria tritici IPO323]
Length = 504
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 241/424 (56%), Gaps = 38/424 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSI P H++ G + VD Y WLH+G ++C+ EL +G PT +HID+ +
Sbjct: 1 MGIQGLLPLLKSIQKPTHLRNFAGQTLGVDAYGWLHRGTVACAIELAEGKPTRKHIDFAL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GV P ++FDG LP K E +RA RKE+ +E G +S ++ Q
Sbjct: 61 HRVRMLIHFGVTPYIVFDGDYLPSKSHTEKERAARRKESKRVGLELLRMGRTSQAHLELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A ELI+ LK+ +V Y+VAP+EAD+Q+ +L ++ V++EDSDL+ FG
Sbjct: 121 KAVDVTPVMARELIEELKRMDVPYVVAPFEADSQLAYLEQQGKISGVLSEDSDLLVFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D++G+ + + +D+S G+ + M +LSGCDYL + MGLK A+
Sbjct: 181 CLLTKLDQYGECIMVNRADFTSCRDISLVGWADKEFRIMAMLSGCDYLPGIDKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ K K+ +++++ +++ + VPP Y E+F A TF HQ V+ T +++L+ +
Sbjct: 241 RYVRKHKTVERIVQAVQFEGKMKVPPGYLEAFLNAERTFLHQWVFCSDTRGLLNLTPLPS 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQLP----------FQEVSDNSHLVVGQNS 340
IG +D LA G+A GDLDP T+LP FQ + S L+ Q
Sbjct: 301 GVDAESMPYIGKTVDAELAAGVACGDLDPNTKLPIVLPQRFQNRFQNPASRSTLI--QTP 358
Query: 341 HLKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDIS 400
K+ KP S+ K ++ + PN F +LSP + T+E+ + S
Sbjct: 359 DEKHGKPISDFFK----------ARRTPLAELDPNSF------TLSPSQQQTSESQRNAS 402
Query: 401 CQSS 404
+S
Sbjct: 403 WSAS 406
>gi|336259943|ref|XP_003344770.1| EXO1 protein [Sordaria macrospora k-hell]
Length = 722
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 207/332 (62%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +++ G + +D Y WLH+GA++C+ +L +G PT +++DY M
Sbjct: 1 MGINGLLPLLKSIHRPTELRKYAGETLGIDGYGWLHRGAIACAIDLAQGKPTRKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + +H+GV P ++FDG LP K + E R R+ + +E G S ++ Q
Sbjct: 61 HRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRDNRREASRRTGLELLKAGKPSQAHIELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+DI+P +A LI LK+ +V Y+VAPYEADAQ+ +L + V++EDSDL+ FG
Sbjct: 121 KAIDITPEMARHLIDELKKADVPYVVAPYEADAQLIYLERQGIISGVVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ KMD++GQ +E S +++S G+T M I SGCDYL SLP MGLK A+
Sbjct: 181 RLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCDYLDSLPSMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+I K K+ ++++K L++ + VP Y E F +A LTF +QRV+ P + +V L+ +
Sbjct: 241 RMIRKLKTPERIVKKLQFDGKIRVPDDYLERFKQAELTFIYQRVFCPVKQAVVCLTEPDE 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQ 322
+I +D+ + LA+ IA GD++P T+
Sbjct: 301 SINVDDMPYIGAPIDAKLARAIAAGDVNPITK 332
>gi|406701048|gb|EKD04204.1| hypothetical protein A1Q2_01501 [Trichosporon asahii var. asahii
CBS 8904]
Length = 743
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 217/354 (61%), Gaps = 26/354 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK P HI++ G +AVD Y WLHKGA C+ +L KG T + Y +
Sbjct: 1 MGISGLLPLLKEAQEPGHIRDFAGKRLAVDAYVWLHKGAFGCAEDLVKGKKTVAFVKYAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +LR V+P+++FDGG LP K E+ RA+SR +++ARA+ E++G + + Y
Sbjct: 61 QRVRMLRMNNVEPLIVFDGGPLPAKKGTEDSRAKSRADHMARALALEAQGRLKDARDCYT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +DI+P +A++LI+V +NV YIVAPYEADAQ+ FL V+ +ITEDSDL+ FGC
Sbjct: 121 KCIDITPEMAYQLIKV---ENVDYIVAPYEADAQLCFLEKEGYVDGIITEDSDLLVFGCK 177
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCI------------LSGCDYL 228
++FKMDK G V + + + +DL G+T M + LSGCDYL
Sbjct: 178 TVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYL 237
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPK 287
S+ G+GLK+AH L+ + K+ ++VI+ ++ VP Y E+F +A L F HQRVY P
Sbjct: 238 PSIVGIGLKKAHRLLRRLKTVERVIQSIRLDGAHLVPDGYIEAFNQAELAFLHQRVYCPH 297
Query: 288 TEDIVHL-----SCISDN----IGNDLD-FLAKGIAIGDLDPFTQLPFQEVSDN 331
+ +V L S +S + IG D++ +A+G+A+GDL P ++ P +++ N
Sbjct: 298 EKRLVPLCEFPASGLSGDDEKWIGLDVEPMVAQGMALGDLHPESRKPIEDLWPN 351
>gi|401881918|gb|EJT46196.1| hypothetical protein A1Q1_05280 [Trichosporon asahii var. asahii
CBS 2479]
Length = 743
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 217/354 (61%), Gaps = 26/354 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK P HI++ G +AVD Y WLHKGA C+ +L KG T + Y +
Sbjct: 1 MGISGLLPLLKEAQEPGHIRDFAGKRLAVDAYVWLHKGAFGCAEDLVKGKKTVAFVKYAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +LR V+P+++FDGG LP K E+ RA+SR +++ARA+ E++G + + Y
Sbjct: 61 QRVRMLRMNNVEPLIVFDGGPLPAKKGTEDSRAKSRADHMARALALEAQGRLKDARDCYT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +DI+P +A++LI+V +NV YIVAPYEADAQ+ FL V+ +ITEDSDL+ FGC
Sbjct: 121 KCIDITPEMAYQLIKV---ENVDYIVAPYEADAQLCFLEKEGYVDGIITEDSDLLVFGCK 177
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCI------------LSGCDYL 228
++FKMDK G V + + + +DL G+T M + LSGCDYL
Sbjct: 178 TVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYL 237
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPK 287
S+ G+GLK+AH L+ + K+ ++VI+ ++ VP Y E+F +A L F HQRVY P
Sbjct: 238 PSIVGIGLKKAHRLLRRLKTVERVIQSIRLDGAHLVPDGYIEAFNQAELAFLHQRVYCPH 297
Query: 288 TEDIVHL-----SCISDN----IGNDLD-FLAKGIAIGDLDPFTQLPFQEVSDN 331
+ +V L S +S + IG D++ +A+G+A+GDL P ++ P +++ N
Sbjct: 298 EKRLVPLCEFPASGLSGDDEKWIGLDVEPMVAQGMALGDLHPESRKPIEDLWPN 351
>gi|302840229|ref|XP_002951670.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300262918|gb|EFJ47121.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 351
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 204/294 (69%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL LKSI P H+ G VA+D YSWLHKGA SCSRELC+G+ + Y +
Sbjct: 1 MGINGLLQQLKSISRPTHVSSYRGQKVAIDGYSWLHKGAYSCSRELCEGIWADGYTRYFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+++L GV PI++FDG LPMK ++E+ R RSR+E L RA + GN +A+ E YQ
Sbjct: 61 SRIDMLLGNGVIPIVVFDGCRLPMKADEEDSRRRSRREALERARTHSASGNMAAATECYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AVDI+P +A +++ L+++ V+ +VAPYEADAQM++LA+ V AV+TEDSD++ +GC
Sbjct: 121 RAVDIAPWMAKVVMEALRERQVTCLVAPYEADAQMSYLALRGDVHAVLTEDSDMLAYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R+++K+D+ G G E S L ++++ GF MLL+MCIL+GCD+L ++PG+G+K+AH
Sbjct: 181 RVLYKLDRGGSGEEVMLSDLPLVREINMAGFNHDMLLQMCILAGCDFLPNIPGVGIKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
A+I K + + KV+++L ++ S PP YE F + + F+HQRV+ P + HL
Sbjct: 241 AMIRKHRDFVKVVRNLHFNGTSPPPGYEIRFQRTLWLFRHQRVFCPIARALTHL 294
>gi|322694691|gb|EFY86514.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 751
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/334 (40%), Positives = 204/334 (61%), Gaps = 9/334 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P +++ G +AVD Y WLH+ A SC+ EL +G PT R+++ M
Sbjct: 1 MGVSGLLPLLKSIQRPTELRKCRGDTLAVDAYGWLHRAAYSCAVELGQGKPTKRYVNAAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L+H+G+ P ++FDG LP K EN RA+ R+E A + G +S + + +Q
Sbjct: 61 HRVRMLQHFGITPYMVFDGDYLPSKAATENSRAKRREEKKKLANDLLKAGKTSQAAQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+D++P +A LIQ LKQ + Y+VAPYEADAQ+ +L V +I++DSDL+ FG
Sbjct: 121 NCIDVTPEMASTLIQQLKQMGIPYVVAPYEADAQLVYLERQGLVNGIISDDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D++G +E +++S G+T M I+SGCDYL LPG+GLK A+
Sbjct: 181 RLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLDGLPGVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ K KS ++V++ L+++ + Y F +A LTF HQ V+ PK ++VHL+ +
Sbjct: 241 RMLRKSKSPERVVRLLQFNGKRISENYLTQFYQAELTFLHQWVFCPKKRELVHLTELDGT 300
Query: 301 -IGNDLDF--------LAKGIAIGDLDPFTQLPF 325
++ F LA+ IA GD+DP T+ P
Sbjct: 301 RTAEEMPFIGAYVEPELARAIAKGDVDPITKAPI 334
>gi|400601842|gb|EJP69467.1| putative EXO1 protein [Beauveria bassiana ARSEF 2860]
Length = 769
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/334 (40%), Positives = 204/334 (61%), Gaps = 9/334 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI PI +K G + VD Y WLH+ A SC+ EL +G PT+R++ M
Sbjct: 1 MGVSGLLPLLKSIQRPIELKTCRGQTLGVDAYGWLHRAAFSCAVELGQGKPTTRYVTTAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+G+KP ++FDG LP K E+ RA+ R+E A + G + + +Q
Sbjct: 61 HRVRMLLHFGIKPYMVFDGDYLPSKAATEDSRAKKREEKKQLANDLMKAGKPGQATQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A LIQ LK+ +SY+VAPYEADAQ+ +L V+ ++++DSDL+ FG
Sbjct: 121 KCVDITPEMASTLIQELKKMGISYVVAPYEADAQLVYLERKGLVDGILSDDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D++G +E +++S G++ M I+SGCDYL LPG+GLK AH
Sbjct: 181 RLLTKLDQYGNCIEINRRDFGACREVSLTGWSDTEFRRMAIMSGCDYLAGLPGVGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
L+ K K+ ++V++ L++ V + F +A LTF HQ V+ P + +VHL+ + +
Sbjct: 241 RLMRKSKTPERVVRMLQFDGKRVSENFLTQFYQAELTFLHQWVFCPVQKGLVHLTDLDET 300
Query: 301 -IGNDLDF--------LAKGIAIGDLDPFTQLPF 325
++ F +A+G+A GDL+P T+ P
Sbjct: 301 RTAAEMPFIGAYVAPDIARGVAAGDLNPMTKEPM 334
>gi|238484551|ref|XP_002373514.1| exonuclease, putative [Aspergillus flavus NRRL3357]
gi|220701564|gb|EED57902.1| exonuclease, putative [Aspergillus flavus NRRL3357]
Length = 746
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 239/414 (57%), Gaps = 17/414 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ G + VD Y WLH+G ++C+ +L PT++H+D+ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHLKKFSGQTLGVDAYGWLHRGTVACAVDLVLDRPTTKHVDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P LIFDG LP K E+ R + R+E+ +E + +G ++ +Y+ +Q
Sbjct: 61 NRVRMLLYFGVTPYLIFDGDNLPSKAGTESDRHQRRQESKTLGLELQRKGRTAEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI LK+ NV Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPLMARQLIDELKKMNVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E + +++S G+T MCILSGCDYL ++ +GLK A+
Sbjct: 181 RLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+++ +K ++ L++ VP Y E+F +A LTF +QRV+ P+ +V L+ D
Sbjct: 241 RCIRKYRNVEKALRMLQFEGQYHVPTNYLENFKQAELTFLYQRVFCPQAGKLVTLTAPED 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
+ IG D+D LA G+A GDLDP T+ P + ++ + +E
Sbjct: 301 DVNLEELPYIGADVDPELAVGVARGDLDPTTKEPLVLRPAPAGKLMHGIQRRQTLGSSAE 360
Query: 351 RKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSS 404
KL+ P+ K+ + PN +P SP + E + S +SS
Sbjct: 361 -LKLNKPISSFFTPKRTPLAELDPNSLTP------SPSQQRLLERHANRSWESS 407
>gi|429852832|gb|ELA27949.1| exo1 protein [Colletotrichum gloeosporioides Nara gc5]
Length = 791
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 209/332 (62%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P+ +K+ +G + VD Y WLH+GA++C+ +L +G PT +++D+ M
Sbjct: 1 MGVSGLLPLLKSIHRPVELKKFKGETLGVDAYGWLHRGAIACAVDLAQGTPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GVKP L+FDG LP K E RA+ R E+ A+E G S ++ +Q
Sbjct: 61 HRVRMLLHFGVKPYLVFDGDFLPSKAATEGSRAKRRDESKKTAMELLKAGKPSQAHLEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A LI LK+ +VSY+VAPYEADAQ+ +L ++ +++EDSDL+ FGC
Sbjct: 121 KAIDVTPEMARNLIDELKKLDVSYVVAPYEADAQLVYLERQGLIDGILSEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D++G +E +++S G++ M ILSGCDYL+ + MGLK A+
Sbjct: 181 RLLTKLDQYGNCIEINRRDFCACREVSLTGWSDTDFRRMAILSGCDYLEGINNMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ K+K+ +++++ ++ + Y F +A LTF HQRVY P +++V L+
Sbjct: 241 RMLRKYKTPERLVRMCQFEGKHRISENYLPRFFQAELTFLHQRVYCPTKKEMVFLTEPEA 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQ 322
G D+ F +A +A+GD++P T+
Sbjct: 301 GKGVEDMPFIGAYVEPEMATAVAVGDVNPMTK 332
>gi|358394562|gb|EHK43955.1| hypothetical protein TRIATDRAFT_319288 [Trichoderma atroviride IMI
206040]
Length = 797
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/334 (40%), Positives = 206/334 (61%), Gaps = 9/334 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP+LKSI P +K+ G +AVD Y WLH+ A SC+ EL +G PT + I+ +
Sbjct: 1 MGVSGLLPILKSIQRPTELKKFNGETLAVDGYGWLHRAAYSCAPELAQGKPTKKFINAAL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L+H+GV P ++FDG LP K E RA+ R+E L A E G SS + + +Q
Sbjct: 61 HRVRMLKHFGVTPYMVFDGDYLPSKAATEESRAKKREEKLKIANEYLKAGKSSQAVQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +DI+P +A LIQ LK+ ++ Y+VAPYEADAQ+ +L V ++++DSDL+ FG
Sbjct: 121 KCIDITPEMASALIQELKKMDIPYVVAPYEADAQLVYLERMGLVGGILSDDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D++G +E +++S G++ M I+SGCDYL LPG+GLK A+
Sbjct: 181 RLLTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAIMSGCDYLNGLPGVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
L+ K KS +++++ L++ + Y F +A LTF HQ V+ P +++VHL+ + N
Sbjct: 241 RLLRKSKSPERIVRMLQFDGKRISENYLTLFYQAELTFLHQWVFCPAKKELVHLTELDAN 300
Query: 301 -IGNDLDF--------LAKGIAIGDLDPFTQLPF 325
++ F +A+ IA GD++P T+LP
Sbjct: 301 RTAEEMPFIGSYVEPEMARKIASGDVNPITKLPI 334
>gi|326433198|gb|EGD78768.1| exonuclease 1 [Salpingoeca sp. ATCC 50818]
Length = 686
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 206/338 (60%), Gaps = 11/338 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL LL+ +HIK G VAVD+Y WLH+GA C+ +L G T HI YCM
Sbjct: 1 MGIQGLLQLLQPATQEMHIKAYAGKKVAVDSYCWLHRGAYGCAADLAMGKKTDLHIQYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L+HYGV P+++ DG LP K E+E +R SR+ +L + + G+ S + E +Q
Sbjct: 61 KRLAMLQHYGVTPVVVLDGRNLPSKGEEEKQRRESRRNHLKQGTDLLRAGHRSKALEHFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+DI+P I H L++ + + +VAPYEADAQ+ FLA SK V AVITEDSDL+ +GC
Sbjct: 121 RAIDITPEIGHALVRACRAAGIECVVAPYEADAQLAFLATSKYVHAVITEDSDLLVYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSML----QKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
R++FKMD++G G E + L Q + ++F +T++ +MCIL+GCDYL S G+G+
Sbjct: 181 RVLFKMDEYGTGQEIRMQRLFQGAQISTTINFMSWTQRQFRKMCILAGCDYLPSPTGLGV 240
Query: 237 KRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
K A + + DK+++ + + VP Y E F +A LTF HQ VYDP T + L+
Sbjct: 241 KTAFKIAKIHDNIDKIVQVIASRGIRVPADYAEMFRRAELTFDHQPVYDPVTSTVRRLTP 300
Query: 297 --ISDN----IGNDLDF-LAKGIAIGDLDPFTQLPFQE 327
+ D+ G LD +A + G+L P T PF +
Sbjct: 301 PRVPDHSIAFAGCMLDADVAVRMCKGELHPTTLEPFPD 338
>gi|322708110|gb|EFY99687.1| exonuclease, putative [Metarhizium anisopliae ARSEF 23]
Length = 751
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/334 (40%), Positives = 203/334 (60%), Gaps = 9/334 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P +K+ G +AVD Y WLH+ A SC+ EL +G PT R+++ M
Sbjct: 1 MGVSGLLPLLKSIQRPTELKKCSGDTLAVDAYGWLHRAAYSCAVELGRGKPTKRYVNAAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L+H+GV P ++FDG LP K E+ RA+ R+E A + G +S + + +Q
Sbjct: 61 HRVRMLQHFGVTPYMVFDGDFLPSKAATEDSRAKRREEKKKLANDLLKAGKTSQAAQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +D++P +A LIQ LKQ + Y+VAPYEADAQ+ +L V +I++DSDL+ FG
Sbjct: 121 KCIDVTPEMASTLIQELKQMGIPYVVAPYEADAQLVYLERQGLVNGIISDDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D++G +E +++S G+T M I+SGCDYL LPG+GLK A+
Sbjct: 181 RLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLNGLPGVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ K KS + ++ L++ + Y F +A LTF HQ V+ PK ++VHL+ +
Sbjct: 241 RMLRKSKSPEAAVRLLQFDGKRISENYLTQFYQAELTFLHQWVFCPKKSELVHLTELDGT 300
Query: 301 -IGNDLDF--------LAKGIAIGDLDPFTQLPF 325
+++ F LA+ IA GD++P T+ P
Sbjct: 301 RTADEMPFIGAYVEPELARAIAKGDVNPITKSPI 334
>gi|169767642|ref|XP_001818292.1| exonuclease [Aspergillus oryzae RIB40]
gi|83766147|dbj|BAE56290.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 746
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 212/335 (63%), Gaps = 10/335 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ G + VD Y WLH+G ++C+ +L PT++H+D+ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHLKKFSGQTLGVDAYGWLHRGTVACAVDLVLDRPTTKHVDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P LIFDG LP K E+ R + R+E+ +E + +G ++ +Y+ +Q
Sbjct: 61 NRVRMLLYFGVTPYLIFDGDNLPSKAGTESDRHQRRQESKTLGLELQRKGRTAEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI LK+ NV Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPLMARQLIDELKKMNVQYMVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E + +++S G+T MCILSGCDYL ++ +GLK A+
Sbjct: 181 RLLSKLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+++ +K ++ L++ VP Y E+F +A LTF +QRV+ P+ +V L+ D
Sbjct: 241 RCIRKYRNVEKALRMLQFEGQYHVPTNYLENFKQAELTFLYQRVFCPQAGKLVTLTAPED 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQLPF 325
+ IG D+D LA G+A GDLDP T+ P
Sbjct: 301 DVNLEELPYIGADVDPELAVGVARGDLDPTTKEPL 335
>gi|115384774|ref|XP_001208934.1| hypothetical protein ATEG_01569 [Aspergillus terreus NIH2624]
gi|114196626|gb|EAU38326.1| hypothetical protein ATEG_01569 [Aspergillus terreus NIH2624]
Length = 748
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 241/423 (56%), Gaps = 35/423 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ G + VD Y WLH+G ++C+ +L PT++HI++ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHLKKFSGQTLGVDAYGWLHRGTVACAVDLVLERPTAKHIEFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L+++GV P L+FDG LP K E +R + R+++ A +E + +G + +Y+ Q
Sbjct: 61 NRVRMLQYFGVTPYLVFDGDNLPSKSGTEAERHQRRQQSKALGLELQRKGRITEAYQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++PS+A +LI+ LK+ +V Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPSMARQLIEELKKMDVQYVVAPYEADAQLVYLERQGIIHGIISEDSDLLVFGAR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E + +D+S G+T MCILSGCDYL ++P +GLK A+
Sbjct: 181 RLLSKLDQHGDCIEINRADFAACRDVSLIGWTDADFRRMCILSGCDYLPNIPRLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+K+ ++ ++ L++ +VP Y E+F +A LTF +QRV+ P +V L+
Sbjct: 241 RSIRKYKNVERALRMLQFEGQYNVPADYLENFKQAELTFLYQRVFCPTGNRLVTLTPPDS 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQLPF---------QEVSDNSHLVVGQNSH 341
+ IG D+D A G+A GDLDP T+ P ++ N +G ++
Sbjct: 301 DVQLEELPFIGGDVDPETAAGVARGDLDPTTKEPLTVKPLAVRNSGITINRRQTLGSSAD 360
Query: 342 LKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
LK K P+ K+ + PN +P SP + + + S
Sbjct: 361 LKPNK----------PISSFFTPKRVPLAELDPNTLTP------SPSQQRLLQRYANNSW 404
Query: 402 QSS 404
+SS
Sbjct: 405 ESS 407
>gi|212546421|ref|XP_002153364.1| exonuclease, putative [Talaromyces marneffei ATCC 18224]
gi|210064884|gb|EEA18979.1| exonuclease, putative [Talaromyces marneffei ATCC 18224]
Length = 749
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 211/338 (62%), Gaps = 10/338 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P ++K+ +G + VD Y WLH+G ++C+ EL PT+RH+D+ +
Sbjct: 1 MGIKGLHGLLKSIQKPCNLKKFDGQTLGVDAYGWLHRGTVACATELALSKPTTRHVDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L +GV P L+FDGG LP K E R + R+++ A+E +S+G + +Y+ +Q
Sbjct: 61 NRVRMLLFFGVTPYLVFDGGDLPSKSGTEADRFKKREDSRKLALELQSKGRVAEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI+ LK+ V Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPEMARQLIEELKRMKVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E +D+S G++ MCILSGCDYL ++P +GLK A+
Sbjct: 181 RLLSKLDQHGDCIEINRGDFAACRDISLIGWSDADFRRMCILSGCDYLSNIPKLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYST-VSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ K+K+ DKV++ L++ VP Y +SF +A TF +QRV+ P + +V L+
Sbjct: 241 RSMRKYKNVDKVLRVLQFEGHYQVPAGYLDSFRQAENTFLYQRVFCPNAQKLVTLTVSGP 300
Query: 300 N--------IGNDLD-FLAKGIAIGDLDPFTQLPFQEV 328
IG D D LA G+A GDL P T+ P + V
Sbjct: 301 GMKLDEMPYIGADYDPELAVGVACGDLHPVTKEPIKFV 338
>gi|390599160|gb|EIN08557.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 317
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 194/306 (63%), Gaps = 12/306 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI H+ E G VAVD Y WLH+G +C+ EL PT +++DY M
Sbjct: 1 MGISGLLPLLKSITRTKHLSEYSGQTVAVDGYVWLHRGTYACAVELANDKPTHKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV LLRHYG+ P L+FDGG LP K E +RA+ R+ENLA+ + ++G S + E++
Sbjct: 61 GRVRLLRHYGITPYLVFDGGPLPAKKRTEVERAKRREENLAKGKQLAAQGRHSQAREYFV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +D++P +A++LI+ LK +NV Y+VAPYEADAQ+ +L + V A++TEDSDL+ FGC
Sbjct: 121 KCIDVTPQMAYQLIKALKAENVPYVVAPYEADAQLAYLERTGAVSAILTEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQK-------NKDLSFGGFTKQMLLEMCILSGCDYLQSLPG 233
++FK+D V S + + + D++ G++ M ILSGCDYL S+PG
Sbjct: 181 HVLFKLDH----VSATVSAVSRSDFGSLSSSDITLLGWSDVQFRAMAILSGCDYLPSIPG 236
Query: 234 MGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
+GLK A AL+ K K+ + ++ L+ VP Y ++F A F HQRVYDP +V
Sbjct: 237 VGLKTAWALLRKHKNVENAVRALRLEGKKPVPDGYLDAFRLAEKVFLHQRVYDPAQARLV 296
Query: 293 HLSCIS 298
HL+ +S
Sbjct: 297 HLNDVS 302
>gi|67525155|ref|XP_660639.1| hypothetical protein AN3035.2 [Aspergillus nidulans FGSC A4]
gi|40744430|gb|EAA63606.1| hypothetical protein AN3035.2 [Aspergillus nidulans FGSC A4]
gi|259486018|tpe|CBF83526.1| TPA: 5'-3' exonuclease and flap-endonuclease (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 761
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 231/398 (58%), Gaps = 22/398 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ G + VD Y WLH+G ++C+ +L PT++HID+ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHLKKFSGQTLGVDAYGWLHRGTVACAVDLVLDRPTTKHIDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +L +GVKP L+FDG LP K E R + R E+ +E +G ++ +Y+ Q
Sbjct: 61 SRVRMLLFFGVKPYLVFDGDNLPSKSGTELDRQQRRHESKTLGMELYRKGRTAEAYQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI+ LK+ ++ Y+VAPYEADAQ+ +L ++ +I+EDSDL+ FG
Sbjct: 121 KAVDVTPLMARQLIEELKKLDIQYVVAPYEADAQLVYLEKHGFIDGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G+ +E + +++SF G+T MCI+SGCDYL ++ +GLK A+
Sbjct: 181 RLLSKLDQHGELIEINRADFTACREVSFVGWTDADFRRMCIMSGCDYLPNIARVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+KS +K ++ L++ VP Y +SF +A LTF +QRV+ PK+ +V L+ D
Sbjct: 241 RSIRKYKSVEKALRMLQFEGPYHVPADYLQSFMQAELTFLYQRVFCPKSGKLVPLTSPDD 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQLPFQEVSDN-SHLVVGQNSHLKNFKPES 349
IG D+D A G+A GDLDP ++ P Q V V QN H+ + S
Sbjct: 301 GVNLDELPFIGADMDPETAVGVANGDLDPTSKKPLQLVIKPLGSSTVEQNKHIASL---S 357
Query: 350 ERK--------KLDLPVQKNLLTKKFTTPRISPNHFSP 379
R+ K P+ K+ + PN +P
Sbjct: 358 RRQTIGSFSDIKPSKPINSFFTPKRVPLAELDPNSLTP 395
>gi|428184049|gb|EKX52905.1| EXO1 exonuclease 1 DNA repair [Guillardia theta CCMP2712]
Length = 353
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 204/324 (62%), Gaps = 15/324 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP+L++I+ P H+ + G VAVDTYSWLHKG+ C+ ELC G PT +++ YC+
Sbjct: 1 MGISGLLPVLRNIIEPRHVSKYAGKKVAVDTYSWLHKGSYGCALELCTGAPTDKYVTYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +L HY V P+++FDG LP K E R SR EN ++ I+ N SA+ E++Q
Sbjct: 61 DRVKMLLHYKVIPVMVFDGANLPSKQGTEVDRKLSRLENRSKGIQALRADNRSAAIEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AVD++P++A++LI+ L++ NV IVAPYEADAQ+ +L + V AVI+EDSD+I FG
Sbjct: 121 RAVDVTPAMAYKLIKALRKLNVECIVAPYEADAQLAYLNLQGYVSAVISEDSDIIAFGAK 180
Query: 181 RIIFKMDKFGQGVE----FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
++ KMDK G G + ++ +L ++ G+ + +MCI +GCDYL+SLPGMG+
Sbjct: 181 AVLLKMDKDGYGEDTCPRYRQKLLGACSTMNLSGWEPERFTQMCIFAGCDYLKSLPGMGI 240
Query: 237 KRAHALISKF--------KSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
K+A+A I+ + + + I L+ VP Y + F +A LTFQ QRV+DP+
Sbjct: 241 KKAYAAINNIGGQRAPLDECFVRAINKLRLDGTLVPSDYLKDFERAYLTFQFQRVFDPEK 300
Query: 289 EDIVHLSC---ISDNIGNDLDFLA 309
+ +V L + D N LD A
Sbjct: 301 QMLVTLKPLPEVRDTSFNHLDIQA 324
>gi|119492135|ref|XP_001263538.1| exonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119411698|gb|EAW21641.1| exonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 658
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 239/423 (56%), Gaps = 35/423 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ +G + VD Y WLH+G ++C+ +L PT++H+D+ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHVKKFKGQTLGVDAYGWLHRGTVACAVDLVLDRPTTKHVDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P L+FDG LP K E++R + R+ + A +E + +G + +Y+ Q
Sbjct: 61 NRVRMLLYFGVTPYLVFDGDNLPSKSGTESERLQKRQASKALGLELQRKGRMAEAYQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI+ LK+ V Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPYMARQLIEELKKMEVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E + +++S G+T MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLPNIPRMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+K+ +K ++ L++ VP Y E+F +A LTF +QRV+ PK +V L+
Sbjct: 241 RSIRKYKNVEKALRMLQFDGQFHVPADYLENFKQAELTFLYQRVFCPKAGKLVPLTQPEK 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ--------LPFQEVSD-NSHLVVGQNSH 341
+ IG D+D +A G+A+GDLDP T+ P + S +G +
Sbjct: 301 DVNLEELPFIGRDVDAEIALGVALGDLDPTTKKQIVLKPPAPGKMASGITRRQTLGSAAE 360
Query: 342 LKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
LK K P+ K+ + PN +P SP + E + S
Sbjct: 361 LKPKK----------PISAFFTPKRMPLAELDPNSLTP------SPSQQRLLERHANSSW 404
Query: 402 QSS 404
+SS
Sbjct: 405 ESS 407
>gi|403179055|ref|XP_003337407.2| hypothetical protein PGTG_19001 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164590|gb|EFP92988.2| hypothetical protein PGTG_19001 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 685
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 214/358 (59%), Gaps = 21/358 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP L+SI H+K G +A+D Y WLH+GA C++ELC G PT++H+DY +
Sbjct: 1 MGIQGLLPFLRSIQRESHLKNWAGKTLAIDGYVWLHRGAYHCAQELCLGNPTTKHVDYFV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++LL +GV ++FDG LP K E+ R R+ LA A + ++G+ + E +
Sbjct: 61 QKIHLLHRFGVSAYVVFDGDHLPSKKVTEDDRENRRRTALANAQKLLAQGDQKRAREEFV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +AH++I L+ V Y+VAPYEADAQ+ +L + +V +ITEDSDL+ +G
Sbjct: 121 KAVDVTPRLAHDVILALRSMGVKYVVAPYEADAQLRYLEMKGEVHGIITEDSDLLVYGAR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FKMD G + L + D G + ++ +M +LSGCDYL S+PG+G+K+AH
Sbjct: 181 NVLFKMDPSGHCIHICRDELGQVHDKRMGLWDERQFRQMAMLSGCDYLSSIPGLGIKKAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
LI + ++ ++ IK + + VPP YE+SF +A LTF+HQ VYDP T ++ L+ + +
Sbjct: 241 DLIRRHQTAERAIKATRLDGKLPVPPKYEQSFREAELTFEHQFVYDPTTRTMIPLTPLPE 300
Query: 300 NIGNDL----------DFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKP 347
+ + D +A +A G +DP T+ F Q+S LK+ P
Sbjct: 301 SPPSPQALAGCGEKWPDQIAIDVAEGRVDPMTKEAFS----------AQSSTLKHLPP 348
>gi|403375999|gb|EJY87977.1| Exonuclease 1 [Oxytricha trifallax]
Length = 835
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 207/348 (59%), Gaps = 23/348 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LLP LKSI P ++ E G VAVD Y WLH+GA +C+ +L G + I YC
Sbjct: 1 MGIKDLLPHLKSIQRPRNVCEYRGQTVAVDGYCWLHQGAYTCAMDLAYGRGVDKLIAYCN 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++ +L + GVKPI+IFDG L MK EN+R +R E +A E + EGN + + +
Sbjct: 61 MKLQMLLNAGVKPIIIFDGCRLIMKGNTENERRNNRLEARIKAEEYQREGNYAMAMRKFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++VDI+P +A E IQVLKQ ++ Y VAPYEADAQ+ ++ + + + +ITEDSDL+ FG
Sbjct: 121 ESVDITPEMAFEFIQVLKQADIEYYVAPYEADAQLAYMYLKGKAQVIITEDSDLLIFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FKMDK G G+E L +L+F F + MLL CILSGCDYL+S+ G+G K+AH
Sbjct: 181 KVLFKMDKAGNGIEIDLENLNDVTELNFTKFNQDMLLTCCILSGCDYLESIKGIGFKKAH 240
Query: 241 ALISKFKSYDKVIKHLKY----STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL-- 294
L+ + D V LK + +P YE++F KA LTF+ Q V+ P ED+V+L
Sbjct: 241 KLV--YDEGDNVQGILKRVRREGKMLIPQDYEKTFEKAFLTFKFQLVFCPDVEDLVYLHD 298
Query: 295 ------SCISDNIGNDLDFLAK--------GIAIGDLDPFTQLPFQEV 328
+ N N LDFL K IA GD+DP + + +
Sbjct: 299 PDIHTAGPLLKNYAN-LDFLGKRLPKETAVAIAKGDIDPMSHKTYSSI 345
>gi|452978258|gb|EME78022.1| hypothetical protein MYCFIDRAFT_116032, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 527
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/389 (38%), Positives = 223/389 (57%), Gaps = 19/389 (4%)
Query: 5 GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVN 64
GLLPLLKSI P H++ G + +D Y WLH+G +SC+ +L +G PT +HID+ +HRV
Sbjct: 1 GLLPLLKSIHKPTHLRNFAGQTLGIDAYGWLHRGTVSCAIDLAEGNPTRKHIDFALHRVR 60
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L H+GVKP L+FDG LP K E +RA RKE+ +E G S + QKAVD
Sbjct: 61 MLIHFGVKPYLVFDGDYLPSKAHTEKERAAKRKESKRVGLEMLRMGRPSQAQLELQKAVD 120
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P++A ELI+ LK+ +V Y+VAPYEAD+QM +L ++ VI+EDSDL+ FG ++
Sbjct: 121 VTPAMARELIEELKKLDVQYVVAPYEADSQMAYLEKKGIIDGVISEDSDLLVFGVQCLLT 180
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D++G+ V + +++S G+T + M +LSGCDYL + MGLK A+ L+
Sbjct: 181 KLDQYGECVMISRADFTSCREISLVGWTDREFRMMAMLSGCDYLPGIDKMGLKTAYRLVR 240
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGN 303
K K+ D+V++ +++ + VP Y E F +A TF +Q V+ P+ + + HL+ + +
Sbjct: 241 KHKTLDRVVRTVQFDGKMRVPKGYLEDFSRAEKTFMYQWVFCPEDQCLTHLNQLPTGLTA 300
Query: 304 D-LDF--------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQN-SHLKNFKPESERKK 353
D + F LA G+A GDLDP T+ P H Q H N KP
Sbjct: 301 DSMPFIGKAVDPELAAGVACGDLDPNTKKPIVLPRSFYHPASRQRIIHTPNEKPGK---- 356
Query: 354 LDLPVQKNLLTKKFTTPRISPNHFSPEET 382
P+ + K+ + PN F+P T
Sbjct: 357 ---PINE-FFKKRIPLAELDPNSFTPSPT 381
>gi|171679457|ref|XP_001904675.1| hypothetical protein [Podospora anserina S mat+]
gi|170939354|emb|CAP64582.1| unnamed protein product [Podospora anserina S mat+]
Length = 719
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 205/332 (61%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGL PLLKSI +K+ G VD Y WLH+GA++C+ EL +G PT +++D+ M
Sbjct: 1 MGIQGLFPLLKSIHRTTELKKYAGETFGVDGYGWLHRGAIACAIELAQGKPTRKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV + ++YGV P L+FDG LP K + E+ R + R+++L +E G S ++ Q
Sbjct: 61 HRVRMFKYYGVTPYLVFDGDFLPSKAKTESSREQRREQSLKTGLELLKAGKPSKAHLELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A LI+ LK+ V Y+VAPYEADAQ+ +L + +++EDSD++ FG
Sbjct: 121 KAIDVTPEMARHLIEELKKAGVPYLVAPYEADAQLVYLEREGVISGIVSEDSDMLVFGAQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ KMD+ GQ VE + +++S G+T M ILSGCDYL ++ +GLK A+
Sbjct: 181 RLLTKMDQHGQCVEIRRKDFCLVREISLTGWTDAEFRHMAILSGCDYLGAVNNIGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
LI K K+ +++I+ LK+ VP Y E F +A LTF HQRV+ PK +DIV +
Sbjct: 241 RLIRKHKTPERIIQMLKFEGKHRVPENYLEEFKQAELTFLHQRVFCPKKKDIVFFTEPGP 300
Query: 300 NIGND-LDF--------LAKGIAIGDLDPFTQ 322
+ D + F LA+ IA GD++P T+
Sbjct: 301 ALKVDEMPFIGAPVETELARAIAAGDVNPITK 332
>gi|47087335|ref|NP_998634.1| exonuclease 1 [Danio rerio]
gi|82177106|sp|Q803U7.1|EXO1_DANRE RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I
gi|28278337|gb|AAH44187.1| Zgc:55521 [Danio rerio]
Length = 806
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/322 (46%), Positives = 201/322 (62%), Gaps = 9/322 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K P+H+K+ G VAVDTY WLHKGA SC+ +L KG PT +++ YCM
Sbjct: 1 MGIQGLLQFIKDASEPMHVKKYRGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVSYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +GVKPIL+FDG LP K E E R R+ NL + + EG + + E +
Sbjct: 61 KFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQANLQKGKQLLREGKITEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+PS+AH++I+ + + V +VAPYEADAQ+ FL S +AVITEDSDL+ FGC
Sbjct: 121 RSVNITPSMAHDVIRAARTRGVDCVVAPYEADAQLAFLNKSDIAQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMDK G G+E + L + K L FT++ MCILSGCDYLQSL G+GL +A
Sbjct: 181 KVILKMDKQGNGLEIEQCHLGRCKSLG-NIFTEEKFRYMCILSGCDYLQSLYGIGLGKAC 239
Query: 241 ALISKFKSYD--KVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ + D KVIK +LK +SVP Y E F KA TF +Q V+DP +V L
Sbjct: 240 KLLRMANNPDILKVIKKMGQYLKMD-ISVPEEYIEGFTKANNTFLYQLVFDPLRRKVVPL 298
Query: 295 SCISDNIGNDLDFLAKGIAIGD 316
+ D+I N G +GD
Sbjct: 299 NPYPDHI-NPAALSYAGTNVGD 319
>gi|239614407|gb|EEQ91394.1| exonuclease [Ajellomyces dermatitidis ER-3]
Length = 857
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 243/451 (53%), Gaps = 33/451 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++++ +G VD Y WLH+G ++C+ +L ++++D+ M
Sbjct: 1 MGITGLHGLLKSIQKPCNLRKFKGQTFGVDAYGWLHRGTVACAIDLALDKHNTKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P L+FDG LP K E RA+ R+E+ +E G + +++ Q
Sbjct: 61 NRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRREESKKLGLELYRSGRVTEAHQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +I+ LK+ + Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGMINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G VE +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 RLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY--STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ K+K+ +K++K L++ + VPP Y E F +A LTF HQ V+ P +V LS +
Sbjct: 241 RNVRKYKTVEKILKMLQFEGNGARVPPQYLEDFKRAELTFLHQLVFCPLARKLVTLSPLP 300
Query: 299 DNIGND-LDFL--------AKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFK 346
++ D + F+ A G+A GDLDP T+ P + S L+V + L
Sbjct: 301 EHTSLDSMPFVGAYIEPDTAIGVACGDLDPITKEPINLQPSYPERSRLLVSRRQTL---- 356
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSR 406
P + K P+ K+ + PN +P SP + EA+ S +SS
Sbjct: 357 PSTTDLKQSKPIDSFFTPKRVPLGELDPNSLTP------SPSQQRLIEANARRSWVASS- 409
Query: 407 MELETVGNFPHNSSEKNCFASEVPEFSASPS 437
P + + +S P +ASPS
Sbjct: 410 --------VPTRGNVRRATSSFFPPNTASPS 432
>gi|393217977|gb|EJD03466.1| PIN domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 415
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 198/314 (63%), Gaps = 14/314 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK I H+ + G +AVD Y WLH+GA SC+ EL +G PT R++D+CM
Sbjct: 1 MGIQGLLPLLKPIQRRRHLSDFSGQTLAVDAYVWLHRGAYSCATELVQGRPTRRYVDFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV LLRH+G+ P L+FDGG LP K+ E +R + R++N+ RA E S+G S + E Y
Sbjct: 61 ARVRLLRHHGILPYLVFDGGPLPAKLGTEKEREKKREQNIKRANELMSQGKESQARELYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A+++I+ LK +NV Y+VAPYEADAQ+ +L V+ +ITEDSDL+ FGC
Sbjct: 121 KCVDVTPQMAYQVIKALKAENVPYVVAPYEADAQLAYLERMGLVDGIITEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGV------EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ K+D V +F L + S G++ M +LSGCDYL S+ G+
Sbjct: 181 NVHVKLDTVSASVVSISRADFGSPSLAAD-SFSLIGWSDAQFRWMAMLSGCDYLPSIAGI 239
Query: 235 GLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
GLK A+ L+ K+K+ +K ++ ++ SVP Y ++F A F HQRVYDP + +V+
Sbjct: 240 GLKTAYQLLKKYKTVEKAVRMIRLDGKKSVPKDYVDAFFLAEKVFLHQRVYDPCLKKLVY 299
Query: 294 LS------CISDNI 301
L+ C+S+ +
Sbjct: 300 LTSPSNEFCLSEEV 313
>gi|406861963|gb|EKD15015.1| putative exonuclease [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 776
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 211/343 (61%), Gaps = 14/343 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI ++K+ EG + VD Y WLH+G +SC+ EL G PT + +D+ M
Sbjct: 1 MGINGLLPLLKSIHKSCNLKKFEGKTLGVDAYGWLHRGTVSCAMELAMGKPTRKFVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L+H+GV P +IFDG LP K E R++ R+E+ +E + G +S +Y +Q
Sbjct: 61 HRVRMLQHFGVIPYMIFDGDYLPSKAATEADRSKRREESKRAGMELLNAGKTSQAYLEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI L++ V YIVAPYEADAQM +L + ++ +++EDSDL+ FG
Sbjct: 121 KAVDVTPEMARQLIDELRKTGVQYIVAPYEADAQMVYLERNGVIDGILSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D++G +E + ++++ G++++ M ILSGCDYL S+ MGLK A+
Sbjct: 181 CLLTKLDQYGNCIEINKADFSACREITLTGWSEKEFRTMAILSGCDYLASINNMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ K K+ +K+I+ L + VP Y E+F +A TF HQRV+ K +V +
Sbjct: 241 RMVRKHKTIEKIIRMLTFDGKFHVPQGYLEAFRQAEFTFLHQRVFCTKELRLVLHTQPEQ 300
Query: 300 NIGNDLDFL-----------AKGIAIGDLDPFTQLPFQEVSDN 331
+ DLD + A+ IA GDL+P T+LP ++N
Sbjct: 301 PL--DLDRMPYLGAFVEPKIAQSIARGDLNPITKLPMDSDTEN 341
>gi|70999992|ref|XP_754713.1| exonuclease [Aspergillus fumigatus Af293]
gi|66852350|gb|EAL92675.1| exonuclease, putative [Aspergillus fumigatus Af293]
Length = 658
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 240/423 (56%), Gaps = 35/423 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ +G + VD Y WLH+G ++C+ +L PT++H+++ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHVKKFKGQTLGVDAYGWLHRGTVACAVDLVLDRPTTKHVEFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P L+FDG LP K E++R + R+ + A +E + +G + +Y+ Q
Sbjct: 61 NRVRMLLYFGVTPYLVFDGDNLPSKSGTESERLQKREASKALGLELQRKGRMAEAYQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI+ LK+ V Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPYMARQLIEELKKVEVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E + ++++ G+T MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCILSGCDYLPNIPRMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+K+ +K ++ L++ VP Y E+F +A LTF +QRV+ PK +V L+
Sbjct: 241 RSIRKYKNVEKALRMLQFDGQFHVPAGYLENFKQAELTFLYQRVFCPKAGKLVPLTQPEK 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ--------LPFQEVSD-NSHLVVGQNSH 341
+ IG D+D +A G+A+GDLDP T+ +P + S +G +
Sbjct: 301 DVNLEELPFIGRDVDAEIALGVALGDLDPTTKEQIVLKPPVPGKMASGITRRQTLGSAAE 360
Query: 342 LKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
LK K P+ K+ + PN +P SP + E + S
Sbjct: 361 LKPKK----------PISAFFTPKRMPLAELDPNSLTP------SPSQQRLLERHANSSW 404
Query: 402 QSS 404
+SS
Sbjct: 405 ESS 407
>gi|159127722|gb|EDP52837.1| exonuclease, putative [Aspergillus fumigatus A1163]
Length = 658
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 239/423 (56%), Gaps = 35/423 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ +G + VD Y WLH+G ++C+ +L PT++H+++ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHVKKFKGQTLGVDAYGWLHRGTVACAVDLVLDRPTTKHVEFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P L+FDG LP K E++R + R+ + A +E + +G + +Y+ Q
Sbjct: 61 NRVRMLLYFGVTPYLVFDGDNLPSKSGTESERLQKREASKALGLELQRKGRMAEAYQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI+ LK+ V Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPYMARQLIEELKKMEVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E + ++++ G+T MCILSGCDYL ++P MGLK A+
Sbjct: 181 RLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCILSGCDYLPNIPRMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+K+ +K ++ L++ VP Y E+F +A LTF +QRV+ PK +V L+
Sbjct: 241 RSIRKYKNVEKALRMLQFDGQFHVPAGYLENFKQAELTFLYQRVFCPKAGKLVPLTQPEK 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ--------LPFQEVSD-NSHLVVGQNSH 341
+ IG D+D +A G+A+GDLDP T+ P + S +G +
Sbjct: 301 DVNLEELPFIGRDVDAEIALGVALGDLDPTTKEQIVLKPPAPGKMASGITRRQTLGSAAE 360
Query: 342 LKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISC 401
LK K P+ K+ + PN +P SP + E + S
Sbjct: 361 LKPKK----------PISAFFTPKRMPLAELDPNSLTP------SPSQQRLLERHANSSW 404
Query: 402 QSS 404
+SS
Sbjct: 405 ESS 407
>gi|327357901|gb|EGE86758.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 857
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 243/451 (53%), Gaps = 33/451 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++++ +G VD Y WLH+G ++C+ +L ++++D+ M
Sbjct: 1 MGITGLHGLLKSIQKPCNLRKFKGQTFGVDAYGWLHRGTVACAIDLALDKHNTKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P L+FDG LP K E RA+ R+E+ +E G + +++ Q
Sbjct: 61 NRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRREESKKLGLELYRSGRVTEAHQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +I+ LK+ + Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGMINGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G VE +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 RLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY--STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ K+K+ +K++K L++ + VPP Y E F +A LTF HQ V+ P +V LS +
Sbjct: 241 RNVRKYKTVEKILKMLQFEGNGARVPPQYLEDFKRAELTFLHQLVFCPLARKLVTLSPLP 300
Query: 299 DNIGND-LDFL--------AKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFK 346
++ D + F+ A G+A GDLDP T+ P + S L+V + L
Sbjct: 301 EHTSLDSMPFVGAYIEPDTAIGVACGDLDPITKEPINLQPSYPERSRLLVSRRQTL---- 356
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSR 406
P + K P+ K+ + PN +P SP + EA+ S +SS
Sbjct: 357 PSTTDLKQSKPIDSFFTPKRVPLGELDPNSLTP------SPSQQRLIEANARRSWVASS- 409
Query: 407 MELETVGNFPHNSSEKNCFASEVPEFSASPS 437
P + + +S P +ASPS
Sbjct: 410 --------VPTRGNVRRATSSFFPPNTASPS 432
>gi|325182167|emb|CCA16620.1| exonuclease 1 putative [Albugo laibachii Nc14]
Length = 701
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 208/357 (58%), Gaps = 33/357 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK + + + G +AVD Y WLH+ CS + + R+IDY M
Sbjct: 1 MGITGLLPLLKGVSQEKTLADYRGETLAVDGYCWLHQVMHRCSEDTFLDPKSERYIDYFM 60
Query: 61 HRV-NLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
RV NL+RH GV P ++FDGG LP K E R +R+ + A+A++ S+ N + + +
Sbjct: 61 ARVDNLVRH-GVSPYIVFDGGSLPSKAHTEEARRLARQNDRAKAMQFLSQNNKEQARKHF 119
Query: 120 QKAVDISPSIAHELI-------------------QVLKQQNVSYIVAPYEADAQMTFLAV 160
+A+DISP +AH +I Q L+Q+N+ Y+VAPYEADAQ+ +L
Sbjct: 120 SRAIDISPYMAHRVILVPSFELDLVQCLHICTGRQRLRQKNIKYVVAPYEADAQLAYLVK 179
Query: 161 SKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMC 220
V VITEDSD + F C++++FKMD G+G E + + +N + + GFT M +EMC
Sbjct: 180 CGLVNGVITEDSDCLVFDCNKVVFKMDWNGKGQEIKVQSILRNSEPNMQGFTHDMFMEMC 239
Query: 221 ILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQ 279
I SGCDYL ++P +GLK ++ L K+ S KV+++L+ V VP YEE F KA LTF+
Sbjct: 240 IFSGCDYLANIPRLGLKTSYNLFRKYGSVRKVLRNLRLEGKVKVPASYEEDFAKAKLTFK 299
Query: 280 HQRVYDPKTEDIVHLSCISDNIGN---DLDFL--------AKGIAIGDLDPFTQLPF 325
HQRVYDP + +V LS D++ D FL A IAIGD+DP T F
Sbjct: 300 HQRVYDPLNKKLVFLSSPPDDLKEQIMDWCFLGPEISDANATAIAIGDMDPITMTYF 356
>gi|407917461|gb|EKG10769.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 730
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 230/424 (54%), Gaps = 30/424 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI H+++ G + VD Y WLH+G ++C+ +L PT +HIDYCM
Sbjct: 1 MGISGLLPLLKSIHKQCHLRQFSGQTIGVDAYGWLHRGTVACAIDLALDKPTRKHIDYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+G+KP L+FDG LP K +RA RKE+ +E G +S ++ Q
Sbjct: 61 HRVRMLIHFGIKPYLVFDGDHLPGKEVTNKERAAKRKESKRVGMELLKLGKTSQAHLELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A I+ LK NV Y+VAPYEAD+QM +L ++ +++EDSDL+ FG
Sbjct: 121 KAVDVTPEMARMFIEELKMLNVDYVVAPYEADSQMVYLEKRGIIQGIVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I K+D +G+ V + K++S G+T +M ILSGCDYL S+ MGL A+
Sbjct: 181 CLITKLDNYGECVVINRADFTACKEISLVGWTDDQFRQMAILSGCDYLPSISKMGLMTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K+K+ D++++ +++ +P Y E+F +A +TF +Q V+ P + +VH +
Sbjct: 241 RLLRKYKTVDRLLRQIQFDGKFKMPAGYPEAFAQAEMTFLYQWVFCPAAKQLVHFTDPDP 300
Query: 300 N--------IGNDLD-FLAKGIAIGDLDPFTQLPFQ----------EVSDNSHLVVGQNS 340
+ IG ++ +A GIA GDL P T+ P Q + + V Q
Sbjct: 301 DVEVEKLLYIGRYMEPKIAAGIARGDLHPNTKRPIQLPQSFRPIKLPAPVSRKIAVAQTP 360
Query: 341 HLKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDIS 400
LK K + K+ + PN F+P + + E+ + ++ +
Sbjct: 361 DLKKSK----------SIDSFFRPKRIPLAELDPNLFTPSPSQQQALQENRGSWSASPVP 410
Query: 401 CQSS 404
Q S
Sbjct: 411 AQVS 414
>gi|389747667|gb|EIM88845.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 322
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 189/309 (61%), Gaps = 9/309 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI + H+ E +G +AVD Y WLH+G+ +C+ EL G TS++++Y M
Sbjct: 1 MGISGLLPLLKSIQVQRHLSEFQGQTLAVDGYVWLHRGSYTCATELATGKNTSKYVEYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V LL+HYG+ P L+FDGG LP K E R + R+ENL R ++G S + +FY
Sbjct: 61 KNVRLLQHYGITPYLVFDGGPLPAKRGTETDRQQRRQENLERGNVLAAQGRHSQARDFYT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A++LI+ LK +NV YIVAPYEADAQ+ +L V+ +ITEDSDL+ FGC
Sbjct: 121 KCVDVTPQMAYQLIKALKAENVPYIVAPYEADAQLAYLERQGVVQGIITEDSDLLVFGCQ 180
Query: 181 RIIFKMDKFGQGV------EFQCSMLQK--NKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
+ FK+D + +F + LS G++ M ILSGCDYL S+P
Sbjct: 181 NVHFKLDSVNATITSISRSQFSSVTATSPFSNGLSLQGWSDVEFRAMAILSGCDYLPSVP 240
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+GLK A L+ K ++KV++ L+ VP YE F +A F HQRVYDP E +
Sbjct: 241 GVGLKTAWTLLRKHGKWEKVVRALRLEGKKEVPRGYEAMFKRAEKVFLHQRVYDPTVEAL 300
Query: 292 VHLSCISDN 300
V L+ I +
Sbjct: 301 VCLAEIPEG 309
>gi|290997069|ref|XP_002681104.1| predicted protein [Naegleria gruberi]
gi|284094727|gb|EFC48360.1| predicted protein [Naegleria gruberi]
Length = 382
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 211/347 (60%), Gaps = 26/347 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPL K+ H+ EL+G VA+D Y WLH+GA SCS ELC+ PT +++ YCM
Sbjct: 1 MGIQGLLPLFKNHCKKGHVSELKGQKVAIDAYVWLHRGAYSCSAELCQNKPTDKYLGYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARA-IECESEGNSSASYEFY 119
H VN+L+H V P+L+FDG LP K + E+ R RKE L +A I ++ A+ E +
Sbjct: 61 HMVNMLKHNKVIPVLVFDGARLPSKADTESDRRSRRKEALEQAQIHLQNHRYEQAN-ECF 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
+KAVDI PS+A++LI K++ V +VAPYEADAQ+ LA + V VITEDSDLIP+G
Sbjct: 120 RKAVDIKPSMAYQLISQCKKEGVEIVVAPYEADAQLAHLARTGYVSCVITEDSDLIPYGA 179
Query: 180 SRIIFKMDKFGQGVEFQCSMLQ----KNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
+I FKMDK+G G + + N F FT M++ MCILSGCDYL SL G+G
Sbjct: 180 PKIFFKMDKYGHGTLLNLADINHTPTANGSTDFSKFTHDMMMRMCILSGCDYLSSLSGIG 239
Query: 236 LKRAHALISKFKSYDKVIKHLK-----YSTVSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
K A+ +I + ++ K+++ L+ + P Y E+F +A LTF+HQRV+D +++
Sbjct: 240 PKTAYKIIKENRTVPKIMEALRKLGKFKRQENTQPKYREAFVRAELTFKHQRVFDILSQE 299
Query: 291 IVHL----SCISDNIGNDLDF--------LAKGIAIGDLDPFTQLPF 325
+ L SC+++ D+ F + I G +DP + PF
Sbjct: 300 MRCLTDPPSCLTE---EDIYFCGPTKPTDIVVQICTGMIDPMSHKPF 343
>gi|393228982|gb|EJD36614.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 357
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 192/301 (63%), Gaps = 9/301 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP L I H++E G V VD Y WLH+GA SC+ EL G PT++++++ M
Sbjct: 1 MGIQGLLPFLSGIQQHTHLREFAGKTVGVDGYVWLHRGAYSCATELVTGNPTTKYVEWAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV L++H+ V P ++FDGG LP K+ E KR + R+ NL+ A ++G+ S + + Y
Sbjct: 61 QRVRLMQHHHVMPYVVFDGGPLPAKLGTEEKRQQQREANLSTANSLAAQGHHSQARDMYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A++LI+ L+ NV YIVAPYEADAQ+ +L ++A++TEDSDL+ FG
Sbjct: 121 KCVDVTPQMAYQLIKALRAANVPYIVAPYEADAQLAYLERQGLIDAILTEDSDLLVFGAR 180
Query: 181 RIIFKMDKFGQGV-----EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
+ +FK+D G V +F L N + G+ M +L+GCDYL S+PGMG
Sbjct: 181 QALFKLDSSGTCVSVCRSDFGSPALHPN---TLVGWGDDQFRWMAMLAGCDYLDSIPGMG 237
Query: 236 LKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
LK AH L+ K+++ +KV++ +++ VP Y ++F A L F HQRVYDP TE +VH
Sbjct: 238 LKTAHKLLRKYRTVEKVLQVVRFEGKCRVPRDYLDNFRIAELAFLHQRVYDPTTERLVHF 297
Query: 295 S 295
+
Sbjct: 298 T 298
>gi|145252118|ref|XP_001397572.1| exonuclease [Aspergillus niger CBS 513.88]
gi|134083116|emb|CAK46789.1| unnamed protein product [Aspergillus niger]
Length = 758
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 271/514 (52%), Gaps = 40/514 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P H+K+ G + +D Y WLH+G ++C+ +L PT +HID+ +
Sbjct: 1 MGIKGLHGLLKSIQKPCHLKKFSGQTLGIDAYGWLHRGTVACAVDLVLERPTRKHIDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P L+FDG LP K E +R + R+++ A +E + +G + +Y+ Q
Sbjct: 61 NRVRMLLYFGVTPYLVFDGDELPSKAGTEVERQKRRQDSKALGLELQRKGRIAEAYQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A ELI+ LK+ NV Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPLMARELIEELKKINVQYVVAPYEADAQLAYLERQGVISGIISEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E + +++S G+T MCILSGCDYL ++ +GLK A+
Sbjct: 181 RLLSKLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCILSGCDYLPNIARLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI-S 298
I K+K+ ++ ++ L++ VP Y ++F +A LTF +QRV+ PK +V L+ +
Sbjct: 241 RSIRKYKNVERALRMLQFDGQYHVPSDYLDNFRQAELTFLYQRVFCPKAGKLVTLTPPEA 300
Query: 299 DNIGNDLDF--------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
+ I DL F +A G+A GDLDP T+ P V S + L N +
Sbjct: 301 EIILEDLTFIGGDVEPDIAVGVARGDLDPTTKEPL--VLKPSLAAKPADKRLTNTISRRQ 358
Query: 351 RKKLDLPVQKNLLTKKFTTPR------ISPNHFSPEETSSLSPGEHHTAEASCDISCQSS 404
++ N F TP+ + PN SP + H A +S D S +
Sbjct: 359 TLGSSAELKPNKPINSFFTPKRVPLAELDPNSLSPSPSQQRLLQRH--ANSSWD-SVPAP 415
Query: 405 SRMEL----ETVGNFPHNSS------EKNCFASEVPEFS-ASPSREMENERNAEHTSLPQ 453
SR L +VG+ SS E+N F + S P++ +AE +LP
Sbjct: 416 SRPALIRSASSVGSSNRASSPLIRSVERNAFLAHASRTSNLQPAKRQRLCSDAEEANLPN 475
Query: 454 --------FCRSIRNPCPALRKEHENKNCTDSVV 479
F S+ + P+ +K K S +
Sbjct: 476 PPDCRSRFFSGSVDDSSPSAQKATRTKKARKSTL 509
>gi|378732295|gb|EHY58754.1| exonuclease 1 [Exophiala dermatitidis NIH/UT8656]
Length = 774
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 208/336 (61%), Gaps = 10/336 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLLP+LKSI +K+ G + VD Y WLH+G + C+ L PT+ HID+ +
Sbjct: 1 MGIKGLLPMLKSIQTHCTLKKFAGQTIGVDAYGWLHRGVVGCAFALALEKPTTIHIDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +L +GV P L+FDG +P K R + R+E A +E G +S +++ Q
Sbjct: 61 SRVRMLLDFGVTPYLVFDGDNIPSKAGTNASRRKKREEAKALGLELHKAGKTSQAHQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI+ LK+ NV ++VAPYEADAQ+ +L ++ +++EDSDL+ FG
Sbjct: 121 KAVDVTPHMARQLIEELKKLNVQFVVAPYEADAQLVYLEQKGIIDGILSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K++++G+ VE + + K++S G+T M + M ILSGCDYL ++ MGLK AH
Sbjct: 181 RLLTKLNQYGELVEVERANFALCKEISLAGWTDSMFMRMAILSGCDYLPNIGKMGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ + K+K +K+++ ++ + VP Y E F +A LTF H RV+ P + +VHL+ +
Sbjct: 241 SYVRKYKDVEKILRMVQLEGKMVVPDKYMERFQQAELTFLHHRVFCPIAQKMVHLNDLPP 300
Query: 300 N-IGNDLDFLAK--------GIAIGDLDPFTQLPFQ 326
+ +++ +L G+A GDLDPF++ P Q
Sbjct: 301 GLLESNMPYLGPYVDPDTSVGVACGDLDPFSKKPIQ 336
>gi|154281289|ref|XP_001541457.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411636|gb|EDN07024.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 832
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 236/419 (56%), Gaps = 24/419 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P +++ +G + VD Y WLH+G ++C+ +L ++++D+ M
Sbjct: 1 MGITGLHGLLKSIQKPCSLRKFKGQTLGVDAYGWLHRGTVACAIDLALDKQNTKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++GV P L+FDG LP K E+ RA+ R+E+ +E G + +++ Q
Sbjct: 61 NRVRMLLYFGVTPYLVFDGDNLPSKAGTESARAQRREESRKLGLELYRSGRVAEAHQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +I+ LK+ + Y+VAPYEADAQ+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G+ VE + +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 RLLSKLDKHGECVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY--STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ K+K+ +K++K L++ + + VPP Y E F KA LTF +Q V+ P ++V LS +
Sbjct: 241 RNVRKYKTIEKILKMLQFEGNGIRVPPQYLEDFKKAELTFLYQLVFCPLNRNLVTLSPLP 300
Query: 299 DN--------IGNDLD-FLAKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFK 346
+G +++ +A G+A GDLDP T+ P + S L + + L
Sbjct: 301 AGAKLDSMPFVGTNIEPDMAIGVACGDLDPMTKEPITLKPSYPERSRLAISRRQTL---- 356
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSS 405
P K P+ K+ + PN+ +P SP + EA+ S +SS
Sbjct: 357 PAMSDLKPSKPIDTFFTPKRVPLGELDPNNLTP------SPSQQRLLEANARRSWVASS 409
>gi|196007442|ref|XP_002113587.1| hypothetical protein TRIADDRAFT_26121 [Trichoplax adhaerens]
gi|190583991|gb|EDV24061.1| hypothetical protein TRIADDRAFT_26121 [Trichoplax adhaerens]
Length = 326
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%), Gaps = 7/302 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK+I P I+E GC VAVD+Y WLH+G CS+E+ +G T +++YCM
Sbjct: 1 MGIQGLLPLLKAIQRPARIEEFAGCTVAVDSYCWLHRGVYGCSKEIIEGKATRMYVNYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L ++ VKPI++FDGG LP K+++E +R +R+ N ++ IE + + + ++
Sbjct: 61 KRIEMLINFNVKPIMVFDGGHLPSKMQKEEERKLNRQFNKSKGIEYLRQDKYIDALDCFR 120
Query: 121 KAVDISPSIAHELIQ-----VLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
+AVDI+P++A ELI+ + +++ IVAPYEADAQ+ +L+ + V+AVITEDSDL+
Sbjct: 121 RAVDITPAMALELIKARLELIQNLKDIECIVAPYEADAQLAYLSKADLVDAVITEDSDLL 180
Query: 176 PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
FGC +++FK+D G+G+E + L++ KD+ G + +CILSGCDYL S+PGMG
Sbjct: 181 VFGCKKVLFKLDPNGRGIEIRLDRLREVKDIDLNGVDHEAFRHICILSGCDYLPSIPGMG 240
Query: 236 LKRAHALI--SKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
LK A+ ++ ++ K Y + + +T+ VP YE F A TF +Q V+DP T+ +
Sbjct: 241 LKTAYKIMKRNRMKVYSAIKYIRRQNTMKVPKNYETQFKMADETFLYQVVFDPVTKTTIP 300
Query: 294 LS 295
L+
Sbjct: 301 LT 302
>gi|302678719|ref|XP_003029042.1| hypothetical protein SCHCODRAFT_17178 [Schizophyllum commune H4-8]
gi|300102731|gb|EFI94139.1| hypothetical protein SCHCODRAFT_17178 [Schizophyllum commune H4-8]
Length = 316
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 195/318 (61%), Gaps = 17/318 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP+LKSI + + G +AVD Y WLH+G +CS EL G T ++IDY M
Sbjct: 1 MGITGLLPVLKSIQTTRKLSDFAGQTIAVDGYVWLHRGVYNCSVELATGKETHKYIDYFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +LRH GV+P ++FDGG LP K EN+R + R+E+LARA ++G S + + Y
Sbjct: 61 HRVRMLRHNGVEPYIVFDGGPLPAKKGTENERRQKREESLARANMLAAQGKHSQARDHYL 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A+++I+ L+ +NV Y+VAPYEADAQM FL + V A++TEDSDL+ FGC
Sbjct: 121 KCVDVTPEMAYQVIKALRVENVKYVVAPYEADAQMAFLERTGAVHAILTEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKD----------LSFGGFTKQMLLEMCILSGCDYLQS 230
++FK+D QC+++ ++ +S G+T M ILSGCDYL S
Sbjct: 181 NVLFKLD------HAQCTVVSISRSDFASVTACDGVSLVGWTDAQFRTMAILSGCDYLPS 234
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
+PG+GLK A + K K+ ++ +K + + +P Y F A F HQRVYDP E
Sbjct: 235 IPGIGLKTAAVYVRKHKTAEQCVKAIAREGKKRIPMGYVSQFKLAEQCFLHQRVYDPARE 294
Query: 290 DIVHLSCISDNIGNDLDF 307
+VHL+ + D+ + D
Sbjct: 295 ALVHLTDVGDDWTEEADL 312
>gi|358054677|dbj|GAA99603.1| hypothetical protein E5Q_06304 [Mixia osmundae IAM 14324]
Length = 687
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 211/373 (56%), Gaps = 45/373 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCS----------------- 43
MGI GLLPLL+ +H+ + +G +A+D Y LH+GA SC+
Sbjct: 1 MGISGLLPLLREATEAVHLSQYKGQTLAIDAYVLLHRGAYSCADAIARAQHPPDKPQRGD 60
Query: 44 ---------------RELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQ 88
RE T R++ +V LLR +GV+P +FDG L K
Sbjct: 61 DKGKGRAGEADELAWRETHDVATTQRYVSASRSKVRLLRFHGVEPFFVFDGAALSSKATT 120
Query: 89 ENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAP 148
E RA RK+ L A +EG A+ E Y +AVD++P +A+++I++LKQ+NV++IVAP
Sbjct: 121 EKDRASRRKDALKEAQRLSAEGKEEAAREAYGRAVDVTPRMAYQVIKMLKQENVNFIVAP 180
Query: 149 YEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSF 208
YEADAQ+ FL + V+ +ITEDSDL+ FGC +IFK+D G+G E + S L K ++ +F
Sbjct: 181 YEADAQLRFLEQTGVVQGIITEDSDLLVFGCQTVIFKLDNEGRGQEVKASRLNKCREYNF 240
Query: 209 GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFY 267
+T +M ILSGCDYL S+ G+GLK A+ L+ K+K+ KVI+ ++ VP +Y
Sbjct: 241 TSWTATEFRQMAILSGCDYLDSISGLGLKTAYRLLKKYKTASKVIQFVRLDGQFRVPRYY 300
Query: 268 EESFGKAVLTFQHQRVYDPKTED---IVHLSCISDNIGND-LDF--------LAKGIAIG 315
E F +A LTF HQ V+DP+T+ + L +++ D L F +A+G+AIG
Sbjct: 301 EREFKRAELTFLHQIVWDPETKKRRFLTPLPVKHEHLNQDELRFVGMFVDETIAQGLAIG 360
Query: 316 DLDPFTQLPFQEV 328
DLDP P +V
Sbjct: 361 DLDPADSKPMHDV 373
>gi|340518752|gb|EGR48992.1| nuclease-like protein [Trichoderma reesei QM6a]
Length = 733
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 202/330 (61%), Gaps = 9/330 (2%)
Query: 5 GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVN 64
GLLP+LKSI P +K+ G +AVD Y WLH+ A SC+ EL +G PT ++I+ +HRV
Sbjct: 2 GLLPILKSIQRPTELKKYNGETLAVDGYGWLHRAAYSCAVELGQGKPTKKYINGVLHRVK 61
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L+H+GV P ++FDG LP K E RA+ R+E L A E G S + + +QK +D
Sbjct: 62 MLKHFGVTPYMVFDGDFLPSKAATEESRAKKREEKLKLANEYLKAGKPSQAAQEFQKCID 121
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
I+P +A LIQ LK+ ++ Y+VAPYEADAQ+ +L V +I++DSDL+ FG R++
Sbjct: 122 ITPEMASALIQQLKKMDIPYVVAPYEADAQLVYLERHGFVSGIISDDSDLLVFGAKRLLT 181
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D++G +E +++S G++ M I+SGCDYL LPG+GLK A+ +I
Sbjct: 182 KLDQYGNCIEINRRDFCACREISLTGWSDTEFRRMAIMSGCDYLHGLPGVGLKTAYRMIR 241
Query: 245 KFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN-IGN 303
K KS +++++ L+ + Y F +A LTF HQ VY P +++VHL+ + +
Sbjct: 242 KTKSPERIVRLLQLDGKRISENYLTLFYQAELTFLHQWVYCPTKKELVHLTELDGTRTAD 301
Query: 304 DLDF--------LAKGIAIGDLDPFTQLPF 325
++ F +A+ IA GD++P T+LP
Sbjct: 302 EMPFIGAYVEPEMARKIASGDVNPITKLPI 331
>gi|345569752|gb|EGX52581.1| hypothetical protein AOL_s00007g569 [Arthrobotrys oligospora ATCC
24927]
Length = 537
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 206/341 (60%), Gaps = 17/341 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LKSI P HIK+ +G VAVD Y WLH+G +SC+ +L PT+R++DY M
Sbjct: 1 MGISGLLPFLKSIQQPTHIKKWKGKRVAVDAYGWLHRGIISCAVDLALDKPTTRYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L+HYGV P L+FDG LP K E R + RK + +E G +S + Q
Sbjct: 61 HRVRMLQHYGVTPYLVFDGDYLPGKKGTELDREKRRKSSRETGLELLRLGRASQAQSELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K++D++P +A LI LK+ N+ YIVAPYEADAQM +L +V A+++EDSDL+ FG
Sbjct: 121 KSIDVTPLMARRLIDELKKANIPYIVAPYEADAQMAYLERIGEVSAILSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+ ++G+ + S S G++ M +LSGCDYL ++P MG+K A+
Sbjct: 181 CLLTKLGQYGECIAIHRSDFPGVSGASMAGWSDSEFCRMAVLSGCDYLGNIPKMGIKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC--- 296
+ ++KS DK+++ ++ + +VP YE+ F A +TF++QRVY P + ++ SC
Sbjct: 241 KFVRRYKSADKIVRAIRMDGSFAVPASYEKDFIAAEMTFKYQRVYCPLSCQLI--SCNGD 298
Query: 297 --ISDNIGNDLDFLAKGI---------AIGDLDPFTQLPFQ 326
+ D++G + + GI A G+LDP T+L +
Sbjct: 299 MTLPDDVGAEQERNFGGIYDAETACKVASGELDPITKLELE 339
>gi|242823476|ref|XP_002488074.1| exonuclease, putative [Talaromyces stipitatus ATCC 10500]
gi|218712995|gb|EED12420.1| exonuclease, putative [Talaromyces stipitatus ATCC 10500]
Length = 767
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 229/398 (57%), Gaps = 24/398 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL LLKSI P ++K+ +G + VD Y WLH+G +C+ EL PT+RH+D+ +
Sbjct: 1 MGIKGLHGLLKSIQKPCNLKKFDGQTLGVDAYGWLHRGTAACATELALNKPTTRHVDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L +GV P L+FDGG LP K E R + R+++ +E +S G ++ +Y+ +Q
Sbjct: 61 NRVRMLLFFGVTPYLVFDGGDLPSKSGTEADRFKKREDSRKLGLELQSIGRTAEAYQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI+ LK+ + Y+VAPYEADAQ+ +L + +I+EDSDL+ FG
Sbjct: 121 KAVDVTPEMARQLIEELKRMKIQYVVAPYEADAQLVYLEQQGIINGIISEDSDLLVFGAR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D+ G +E +D+S G+ MCILSGCDYL ++P +GLK A+
Sbjct: 181 RLLSKLDQHGDCIEINRGDFAACRDISLIGWIDADFRRMCILSGCDYLSNIPKLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYST-VSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ K++ +KV++ L++ VP Y ++F KA TF +QRV+ P + +V L+
Sbjct: 241 RSMRKYRDVEKVLRVLQFEGHYQVPAGYLDNFRKAENTFLYQRVFCPTAQRLVTLTVPDP 300
Query: 300 N--------IGNDLD-FLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
IG D D +A G+A GDL P T+ + S LV G + ++
Sbjct: 301 GMNLDEMPYIGADYDPEIAIGVACGDLHPVTKETIKYTHFASRLVPGL------MRRQTL 354
Query: 351 RKKLDLPVQKNLLTKKFTTPR------ISPNHFSPEET 382
+L ++++ + F TPR + PN +P T
Sbjct: 355 ASSAELKPKRSI--ESFFTPRRLPLTELDPNSLTPSPT 390
>gi|453080704|gb|EMF08754.1| PIN domain-like protein [Mycosphaerella populorum SO2202]
Length = 739
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 264/510 (51%), Gaps = 33/510 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSI P H++ G + VD Y W+H+G ++C+ EL +G PT +HID+ M
Sbjct: 1 MGIQGLLPLLKSIHKPTHLRHFAGQTLGVDAYGWMHRGTVACAIELAEGKPTRKHIDFVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GVKP L+FDG LP K E +RA RKE+ ++ G S + Q
Sbjct: 61 HRVRMLIHFGVKPYLVFDGDYLPSKAHTEKERAARRKESKRVGLDMLRMGRPSQAQLELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A E+I+ L++ +V Y+VAPYEAD+Q+ +L + V++EDSDL+ FG +
Sbjct: 121 KAVDVTPVMAREVIEELRKLDVEYVVAPYEADSQLAYLEKEGIINGVLSEDSDLLVFGVN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D+FG+ V + +D+S G++ + M +LSGCDYL + +GLK A+
Sbjct: 181 CLLTKLDQFGECVMVNRADFTSVRDISLVGWSDKEFRMMAMLSGCDYLPGIDKIGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K K+ +K+++ +++ + VP Y ++F +A TF HQ V+ P+ + + HL+ +
Sbjct: 241 RLVRKHKTIEKIVRTVQFDGKMKVPKDYLDAFYRAERTFMHQWVFCPEAQCLTHLNPLPA 300
Query: 300 NIGNDL-DFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
+ +L ++ A G+AIGDL P T+ S HL H +
Sbjct: 301 GLNVELMPYIGHHVEADHAYGVAIGDLHPNTKTRIVLPSRLHHL-----GHSRRSVSSPM 355
Query: 351 RKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSRMELE 410
K P+ +++ + PN F SP + + E S ++ +E
Sbjct: 356 EKHGGKPIDDYFKSRRMPLAELDPNLF------KHSPSQQNLLETQGLTSWSAAPTSVIE 409
Query: 411 TVGNFPHNSSEKNCFASEVPEFSASPSREMENERNAE-HTSLPQFC-RSIRNPCPALRKE 468
V P A + FSA NA+ +S Q R++ +P P R
Sbjct: 410 PVSRIP---------APRLSHFSAPRIFNGLVASNAQPRSSASQGSRRTVTDPSPTQRAS 460
Query: 469 HENKN-CTDSVVGKGRTENRKVIVRSSYFL 497
+ + C+DS + + +S F
Sbjct: 461 PKRQRLCSDSGIAAAMKGTSGIETATSRFF 490
>gi|403373775|gb|EJY86812.1| Exonuclease 1, putative [Oxytricha trifallax]
Length = 1007
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 214/383 (55%), Gaps = 21/383 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQ LL L I HI++ G VAVD Y WLHK +C ++ +G + I YC
Sbjct: 1 MGIQNLLKHLSEIEKKKHIRDYAGLRVAVDGYCWLHKAVYTCKEQMAQGQGLDKLIQYCT 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+N+L+++ V P+++FDGG L MK E R ++R++N + E +GN + + Y
Sbjct: 61 KRINMLKNHNVTPVMVFDGGKLNMKKSTEEVRQKTREKNYKKFQEYMKKGNMDKAIKKYG 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++DI+P +AH LIQVLK Q V YIVAPYEADAQ+ FL V+ V TEDSDL+ FG
Sbjct: 121 ESIDITPQMAHVLIQVLKAQEVEYIVAPYEADAQLAFLWHKGHVQVVFTEDSDLLAFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ FKMD G G+E LQ K F FT+ MLL CILSGCDYL S+ G+G +A
Sbjct: 181 KVFFKMDSDGFGIEIDLDKLQTIKKPDFTMFTQDMLLTTCILSGCDYLDSIKGIGFMKAQ 240
Query: 241 ALISK---FKSYDKVIKHLKYSTVSV-PPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
L+ + ++ V+ +LK SV P YEE + KA LTF+ QRV+ P + +V L
Sbjct: 241 KLVQESGPVDTFHDVLGYLKDEGKSVIPDDYEEDYKKAFLTFKFQRVFCPVRQKLVMLHD 300
Query: 297 ISD--------------NIGNDL-DFLAKGIAIGDLDPFTQLPFQEVSDNSHLV--VGQN 339
I++ +GND+ D+ + IA G++DP T F ++ +G+
Sbjct: 301 IAECEHGSEIAKIKDTSFLGNDIDDYRTQRIARGEIDPITYQEFVRTQAEDEIIGRLGKI 360
Query: 340 SHLKNFKPESERKKLDLPVQKNL 362
K S+ ++ P Q +L
Sbjct: 361 RTRKTLNLSSQNTEIKSPNQADL 383
>gi|449303621|gb|EMC99628.1| hypothetical protein BAUCODRAFT_136211 [Baudoinia compniacensis
UAMH 10762]
Length = 730
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 236/419 (56%), Gaps = 27/419 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLKSI P H++ G + VD Y WLH+G +SC+ EL + PT +HID+ +
Sbjct: 1 MGIQGLLPLLKSIHKPTHLRNFAGQTLGVDAYGWLHRGTISCAIELAQQKPTRKHIDFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L H+GV P L+FDG LP K E +RA RKE +E G + +Y+ Q
Sbjct: 61 NRVRMLIHFGVSPYLVFDGDYLPSKAHTEKERAARRKEAKRVGLELLRVGKPAQAYQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A ELI+ LK VSY+VAPYEAD+Q+ +L + +++EDSDL+ FG
Sbjct: 121 KAIDVTPLMARELIEELKPLGVSYVVAPYEADSQLAYLEKQGIISGIVSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D++G+ V + +++S G+T + M +LSGCDYL + G+G+K A+
Sbjct: 181 CLLTKLDQYGECVMIRRQDFTSCREVSLVGWTDREFRMMSMLSGCDYLPGIEGLGVKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K K+ + ++ L++ VPP Y E+F +A TF +Q V+ P+ + +V+L+
Sbjct: 241 RLVRKHKAIEPAVRMLQFDGKKKVPPGYLEAFSRAERTFLYQWVFCPEAQRLVNLNAPPA 300
Query: 300 N--------IGNDLDF-LAKGIAIGDLDPFTQ----LPFQEVSDNSHLVVGQNSHLKN-- 344
IG ++ +A+ +A G++DP T+ LP + +S V + +
Sbjct: 301 ELDVAGMPYIGQCVEPEVAQAVAAGEVDPNTKERLHLPSRPHFPSSRSKVAETNEKPGVP 360
Query: 345 ----FKPESERKKLDLPVQK--NLLTKKFTTPR-----ISPNHFSPEETSSLSPGEHHT 392
FKP ++ K ++ P +K +T F R + PN F+P + HT
Sbjct: 361 ITDFFKPTAQAKTVETPSEKPGKGITNFFKPTRTPLAELDPNSFTPSPSQQRLLAAQHT 419
>gi|298708646|emb|CBJ26133.1| exonuclease, putative; 92014-93872 [Ectocarpus siliculosus]
Length = 587
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 192/320 (60%), Gaps = 5/320 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LKS+ P HI E G VD Y WLH+GA SC ELC G+ T +++ +CM
Sbjct: 1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RVNLL H+G++P+++FDG LP+K +R R R+ ++ + G + A+ + +
Sbjct: 61 KRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAV ++ +A L++ L+Q V +VAPYEADAQ+ FL+ + V+ V++EDSD +P+GC
Sbjct: 121 KAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL-QSLPGMGLKRA 239
+++FKMD G G E Q L N LS + M L++C+L GCDY+ S+ G+G+ A
Sbjct: 181 KVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTED----IVHLS 295
+ L+ + +S DK+I + S +P Y E + +A LTF+H +Y+P+TED +
Sbjct: 241 YKLVDRHRSLDKIIGAINSSRFVIPEGYWEQYKRARLTFRHHIIYNPETEDEKGHMADGK 300
Query: 296 CISDNIGNDLDFLAKGIAIG 315
+ G D+ A G G
Sbjct: 301 AMGWQQGPDIGLRATGEGWG 320
>gi|452004232|gb|EMD96688.1| hypothetical protein COCHEDRAFT_1220269 [Cochliobolus
heterostrophus C5]
Length = 724
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 290/574 (50%), Gaps = 69/574 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKS+ P +K+ G + VDTY WLH+ +C+ +L PT++++D+ M
Sbjct: 1 MGISGLLPLLKSVQKPGSLKKYAGQTIGVDTYGWLHRATAACAIDLALDKPTTKYVDFVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GV P L+FDG LP K E R RKE+ +E G + + + Q
Sbjct: 61 HRVRMLIHFGVTPYLVFDGDNLPSKAGTEKGRRERRKESKRLGLELLKVGKVAQAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I+ LK+ N+ Y+VAPYEAD+Q+ +L + V++EDSDL+ FG
Sbjct: 121 KSVDVTPEMARMVIEELKKNNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I K+DK+G+ +E + +++SF G++ M ILSGCDYL + G+GLK AH
Sbjct: 181 CLITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ K K+ D+++K ++ + VP + ESF +A TF +Q VY P E +V+L+ + D
Sbjct: 241 RMLRKHKTVDRLVKAAQFDGKLKVPAGFMESFDQAEKTFLYQWVYCPVEEKLVNLTPLGD 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESE 350
+ D+ + LAKG+A+GDL P ++LP + V G++ N +P +
Sbjct: 301 GVNLADMPYIGEEVPPHLAKGVALGDLYPRSKLPME--------VAGKSKS--NIQPLAP 350
Query: 351 RKK----LDLPVQKNLLT-------KKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDI 399
++ + P KN+ + K+ +SPN F+P + + + T+ +
Sbjct: 351 SRRSSAIMQTPDAKNMKSIDSFFKPKRTPLAELSPNLFTPSPSQQVLLEQQRTSSGWAAV 410
Query: 400 SCQSSSRMELETVGNFPHNSSEKNCFASEVPEFSASPSREMENERNAEHTSLPQFCRSIR 459
+P ++ + ++ PQ R+I
Sbjct: 411 ----------------------------------PAPISRLQQQYPPPPSTAPQPRRTIT 436
Query: 460 NPCPALRKEHENKN---CTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVE 516
+P R +K C+DSV T + +VRS +F ++++K +
Sbjct: 437 DPIGGRRSVPPSKRPRLCSDSVFDTP-TAGGEDVVRSQFFASSTPEPSPTLHRRKKSRRK 495
Query: 517 NDAAIDMSENTGLQSAHFDYSYLKGTAIKRKTSL 550
D I + + +Q + + L+ TA +RK L
Sbjct: 496 TDQDIQLYSDDSIQEGEVEAADLEQTASQRKNKL 529
>gi|358385942|gb|EHK23538.1| hypothetical protein TRIVIDRAFT_37141, partial [Trichoderma virens
Gv29-8]
Length = 731
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 203/330 (61%), Gaps = 9/330 (2%)
Query: 5 GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVN 64
GLLPLLKSI P +K+ G +AVD Y WLH+ A SC+ EL +G PT + I+ +HRV
Sbjct: 1 GLLPLLKSIQKPTELKKFNGETLAVDGYGWLHRAAYSCAVELGQGKPTKKFINAALHRVR 60
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L+H+GV P ++FDG LP K E RA+ R++ L A E G S + + +QK +D
Sbjct: 61 MLKHFGVTPYMVFDGDFLPSKAATEASRAKKREDKLKLANEYLKAGKPSQAAQEFQKCID 120
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
I+P +A LIQ LK+ ++ Y+VAPYEADAQ+ +L V+ +I++DSDL+ FG R++
Sbjct: 121 ITPEMASALIQQLKKMDIPYVVAPYEADAQLVYLERHGFVDGIISDDSDLLVFGAKRLLT 180
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D++G +E +++S G++ M I+SGCDYL LPG+GLK A+ ++
Sbjct: 181 KLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAIMSGCDYLNGLPGVGLKTAYRMLR 240
Query: 245 KFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI-SDNIGN 303
K KS +++++ L++ + Y F +A LTF HQ V+ P +++VHL+ + +
Sbjct: 241 KTKSPERIVRLLQFEGKRISENYLTLFYQAELTFLHQWVFCPTKKELVHLTELDGTHTAE 300
Query: 304 DLDF--------LAKGIAIGDLDPFTQLPF 325
++ F +A+ IA GD++P T+LP
Sbjct: 301 EMPFIGSHVEPEMARKIASGDVNPITKLPI 330
>gi|320591287|gb|EFX03726.1| exodeoxyribonuclease 1 [Grosmannia clavigera kw1407]
Length = 805
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 205/337 (60%), Gaps = 12/337 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P +K+ G AVD Y WLH+GA+SC+ EL +G PT +++D +
Sbjct: 1 MGISGLLPLLKSIQRPTELKKFSGETFAVDAYGWLHRGAISCAMELAQGKPTRKYVDSFL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +++H+GV P L+FDG LP K E RA+ R+E+ GN+ ++ +Q
Sbjct: 61 NRVRMVQHFGVIPYLVFDGDFLPSKAATEASRAKRREESRKAGEALIKAGNTKQAFLEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+DI+P +A +I+ LK+ + YIVAPYEADAQM +L V +++EDSDL+ FG
Sbjct: 121 KAIDITPEMACHVIEELKKLGLPYIVAPYEADAQMVYLEREGLVSGILSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ KMD G +E +++S +T + M ILSGCDYL+ + +GLK A+
Sbjct: 181 RLLTKMDMQGHCIEINRRDFCACREISLTDWTDREFRHMAILSGCDYLEGIGNLGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+I K K+ +KV++ L++ V Y SF +A LTF +QRV+ P +++ L+ +
Sbjct: 241 RMIRKHKTVEKVVRMLQFDGKFRVHENYLASFRQAELTFIYQRVFCPVKQELAFLTEPTA 300
Query: 300 NIGNDLDFL-----------AKGIAIGDLDPFTQLPF 325
++G DLD + A+G+A+G L+P T+ P
Sbjct: 301 SMGLDLDGMRFIGQKMDHDVARGVALGQLNPMTKDPI 337
>gi|226295014|gb|EEH50434.1| exonuclease [Paracoccidioides brasiliensis Pb18]
Length = 879
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 203/332 (61%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++++ +G + VD Y WLH+G ++C+ +L +R++D+ M
Sbjct: 1 MGIAGLHGLLKSIQKPCNLRKFKGQTLGVDAYGWLHRGTVACAIDLALDKHNTRYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L H+G+ P L+FDG LP K E+ RA+ R+E+ +E G + + Q
Sbjct: 61 NRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRREESKRLGLELFHAGRIFEAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A +I+ LK+ V YIVAPYEADAQ+ +L ++ +I+EDSD++ FG
Sbjct: 121 KAIDVTPYMARLMIEELKRVKVQYIVAPYEADAQLVYLERQGIIDGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G VE S +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 RLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+K+ +K +K +++ S VPP Y E F +A TF HQ V+ P +V LS +S
Sbjct: 241 RNIRKYKTVEKTMKMIQFEGGSRVPPQYLEDFKRAEFTFLHQLVFCPVARRLVTLSPLSG 300
Query: 300 N--------IGNDLD-FLAKGIAIGDLDPFTQ 322
N +G D+D A GIA GDLDP T+
Sbjct: 301 NMTLESMPFVGADIDPDTAIGIACGDLDPRTK 332
>gi|426195183|gb|EKV45113.1| hypothetical protein AGABI2DRAFT_207951 [Agaricus bisporus var.
bisporus H97]
Length = 320
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 189/303 (62%), Gaps = 9/303 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+SI H+ E +G +AVD Y WLHKG +C+ EL G PT +++DY M
Sbjct: 1 MGIAGLLPALRSIQKTRHLSEFKGQTIAVDAYVWLHKGVYACATELAIGKPTHKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LLRHYGV+P ++FDGG LP K E++R + R ENLAR ++G S + + +
Sbjct: 61 HRVRLLRHYGVEPYVVFDGGPLPAKRGTESERKKRRDENLARGKALVAQGRHSQARDCFI 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +D++P +A++LI+ L+ +NV YIVAPYEADAQ+ +L V A++TEDSDL+ FGC
Sbjct: 121 KCIDVTPEMAYQLIKALRPENVQYIVAPYEADAQLAYLERKGLVSAILTEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGV------EFQ--CSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
++FK+D V +F S + ++ G+ M ILSGCDYL S+P
Sbjct: 181 NVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWNDTQFRAMAILSGCDYLPSIP 240
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+GLK A+ L+ K+K+ + VI+ + +VP Y + + A F+ QRVYDP +
Sbjct: 241 GIGLKTANNLMRKWKTAEAVIRAVTLEGKKNVPNGYLQQYNLADRCFRFQRVYDPLEGKL 300
Query: 292 VHL 294
VHL
Sbjct: 301 VHL 303
>gi|261195837|ref|XP_002624322.1| exonuclease [Ajellomyces dermatitidis SLH14081]
gi|239587455|gb|EEQ70098.1| exonuclease [Ajellomyces dermatitidis SLH14081]
Length = 855
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 243/449 (54%), Gaps = 33/449 (7%)
Query: 3 IQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHR 62
++ L LLKSI P ++++ +G VD Y WLH+G ++C+ +L ++++D+ M+R
Sbjct: 1 MEWLHGLLKSIQKPCNLRKFKGQTFGVDAYGWLHRGTVACAIDLALDKHNTKYVDFAMNR 60
Query: 63 VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKA 122
V +L ++GV P L+FDG LP K E RA+ R+E+ +E G + +++ QKA
Sbjct: 61 VRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRREESKKLGLELYRSGRVTEAHQELQKA 120
Query: 123 VDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRI 182
VD++P +A +I+ LK+ + Y+VAPYEADAQ+ +L + +I+EDSDL+ FG R+
Sbjct: 121 VDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGMINGIISEDSDLLVFGAKRL 180
Query: 183 IFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHAL 242
+ K+DK G VE +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 LSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTAYRN 240
Query: 243 ISKFKSYDKVIKHLKY--STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
+ K+K+ +K++K L++ + VPP Y E F +A LTF HQ V+ P +V LS + ++
Sbjct: 241 VRKYKTVEKILKMLQFEGNGARVPPQYLEDFKRAELTFLHQLVFCPLARKLVTLSPLPEH 300
Query: 301 IGND-LDFL--------AKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFKPE 348
D + F+ A G+A GDLDP T+ P + S L+V + L P
Sbjct: 301 TSLDSMPFVGAYIEPDTAIGVACGDLDPITKEPINLQPSYPERSRLLVSRRQTL----PS 356
Query: 349 SERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSRME 408
+ K P+ K+ + PN +P SP + EA+ S +SS
Sbjct: 357 TTDLKQSKPIDSFFTPKRVPLGELDPNSLTP------SPSQQRLIEANARRSWVASS--- 407
Query: 409 LETVGNFPHNSSEKNCFASEVPEFSASPS 437
+ T GN + +S P +ASPS
Sbjct: 408 VPTRGNV------RRATSSFFPPNTASPS 430
>gi|225678637|gb|EEH16921.1| exodeoxyribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 701
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 203/332 (61%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P ++++ +G + VD Y WLH+G ++C+ +L +R++D+ M
Sbjct: 1 MGIAGLHGLLKSIQKPCNLRKFKGQTLGVDAYGWLHRGTVACAIDLALDKHNTRYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L H+G+ P L+FDG LP K E+ RA+ R+E+ +E G + + Q
Sbjct: 61 NRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRREESKRLGLELFHAGRIFEAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+D++P +A +I+ LK+ V YIVAPYEADAQ+ +L ++ +I+EDSD++ FG
Sbjct: 121 KAIDVTPYMARLMIEELKRVKVQYIVAPYEADAQLVYLERQGIIDGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G VE S +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 RLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I K+K+ +K +K +++ S VPP Y E F +A TF HQ V+ P +V LS +S
Sbjct: 241 RNIRKYKTVEKTMKMIQFEGGSRVPPQYLEDFKRAEFTFLHQLVFCPVARRLVTLSPLSG 300
Query: 300 N--------IGNDLD-FLAKGIAIGDLDPFTQ 322
N +G D+D A GIA GDLDP T+
Sbjct: 301 NMTLESMPFVGADIDPDTAIGIACGDLDPRTK 332
>gi|325091676|gb|EGC44986.1| exonuclease [Ajellomyces capsulatus H88]
Length = 830
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 234/425 (55%), Gaps = 36/425 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P +++ +G + VD Y WLH+G ++C+ +L ++++D+ M
Sbjct: 1 MGITGLHGLLKSIQKPCSLRKFKGQTLGVDAYGWLHRGTVACAIDLALDKHNTKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++G+ P L+FDG LP K E+ RA+ R+E+ +E G + +++ Q
Sbjct: 61 NRVRMLLYFGITPYLVFDGDNLPSKAGTESARAQRREESKKLGLELYRSGRVAEAHQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +I+ LK+ + YIVAPYEADAQ+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARLMIEELKKLKIQYIVAPYEADAQLVYLEKHGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G VE + +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 RLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY--STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ K+K+ +K++K L++ + + VPP Y E F KA LTF +Q V+ P +V LS +
Sbjct: 241 RNVRKYKTIEKILKMLQFEGNGIRVPPQYLEDFKKAELTFLYQLVFCPLNRKLVTLSPLP 300
Query: 299 DN--------IGNDLD-FLAKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFK 346
+G D++ +A G+A GDLDP T+ P + S L + + L
Sbjct: 301 AGAKLDSMPFVGTDIEPDMAIGVACGDLDPMTKEPITLKLSYPERSRLAISRRQTLPAMS 360
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISP------NHFSPEETSSLSPGEHHTAEASCDIS 400
RK +D F TP+ P N +P SP + EA+ S
Sbjct: 361 DLKPRKPID----------TFFTPKRVPLGELDLNSLTP------SPSQQRLLEANARRS 404
Query: 401 CQSSS 405
+SS
Sbjct: 405 WVASS 409
>gi|409076372|gb|EKM76744.1| hypothetical protein AGABI1DRAFT_78182 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 320
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 189/303 (62%), Gaps = 9/303 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+SI H+ E +G +AVD Y WLHKG +C+ EL G PT +++DY M
Sbjct: 1 MGIAGLLPALRSIQKTRHLSEFKGQTIAVDAYVWLHKGVYACATELAIGKPTHKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LLRHYGV+P ++FDGG LP K E++R + R ENLAR ++G S + + +
Sbjct: 61 HRVRLLRHYGVEPYVVFDGGPLPAKRGTESERKKRRDENLARGKALVAQGRHSQARDCFI 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +D++P +A++LI+ L+ +NV YIVAPYEADAQ+ +L V A++TEDSDL+ FGC
Sbjct: 121 KCIDVTPEMAYQLIKALRPENVQYIVAPYEADAQLAYLERKGLVSAILTEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGV------EFQ--CSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
++FK+D V +F S + ++ G+ M ILSGCDYL S+P
Sbjct: 181 NVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWNDTQFRAMAILSGCDYLPSIP 240
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+GLK A+ L+ K+K+ + VI+ + +VP Y + + A F+ QRVYDP +
Sbjct: 241 GIGLKTANNLMRKWKTAEAVIRAVTLEGKKNVPNGYLQQYNLADRCFRFQRVYDPLEGKL 300
Query: 292 VHL 294
VHL
Sbjct: 301 VHL 303
>gi|350589314|ref|XP_003130603.3| PREDICTED: exonuclease 1 [Sus scrofa]
Length = 836
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 210/354 (59%), Gaps = 26/354 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K P+H+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPVHVRKYKGQVVAVDTYCWLHKGAVACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHSVIKAARAQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGKCKQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y E F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIEGFIRANNTFLYQLVFDPINRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIG-----------DLDPFTQLPFQEVS 329
D+I D +A IA+G D +P T +P Q S
Sbjct: 300 AYEDDIDPATLSYAGRYIDDSVALQIALGNKDINTLEQIDDYNPDTVMPAQSRS 353
>gi|395855341|ref|XP_003800124.1| PREDICTED: exonuclease 1 [Otolemur garnettii]
Length = 835
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 212/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+N+L G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFLNMLLSNGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCKQLG-DMFTEEKFRYMCILSGCDYLPSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP T ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPITRKLIPLN 299
Query: 296 CISDNI--------GNDLD-FLAKGIAIGDLDPFTQLPFQEVSD 330
D+I G +D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDIDPETLSYAGRYVDNSIALQIALGNKDINT---FEQIDD 340
>gi|240274250|gb|EER37767.1| exonuclease [Ajellomyces capsulatus H143]
Length = 829
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 234/425 (55%), Gaps = 36/425 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL LLKSI P +++ +G + VD Y WLH+G ++C+ +L ++++D+ M
Sbjct: 1 MGITGLHGLLKSIQKPCSLRKFKGQTLGVDAYGWLHRGTVACAIDLALDKHNTKYVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L ++G+ P L+FDG LP K E+ RA+ R+E+ +E G + +++ Q
Sbjct: 61 NRVRMLLYFGITPYLVFDGDNLPSKAGTESARAQRREESKKLGLELYRSGRVAEAHQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +I+ LK+ + YIVAPYEADAQ+ +L + +I+EDSD++ FG
Sbjct: 121 KAVDVTPYMARLMIEELKKLKIQYIVAPYEADAQLVYLEKHGIINGIISEDSDMLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+DK G VE + +D+S G+T MCILSGCDYL +LP MGLK A+
Sbjct: 181 RLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY--STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ K+K+ +K++K L++ + + VPP Y E F KA LTF +Q V+ P +V LS +
Sbjct: 241 RNVRKYKTIEKILKMLQFEGNGIRVPPQYLEDFKKAELTFLYQLVFCPLNRKLVTLSPLP 300
Query: 299 DN--------IGNDLD-FLAKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNFK 346
+G D++ +A G+A GDLDP T+ P + S L + + L
Sbjct: 301 AGAKLDSMPFVGTDIEPDMAIGVACGDLDPMTKEPITLKLSYPERSRLAISRRQTLPAMS 360
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISP------NHFSPEETSSLSPGEHHTAEASCDIS 400
RK +D F TP+ P N +P SP + EA+ S
Sbjct: 361 DLKPRKPID----------TFFTPKRVPLGELDLNSLTP------SPSQQRLLEANARRS 404
Query: 401 CQSSS 405
+SS
Sbjct: 405 WVASS 409
>gi|126306967|ref|XP_001368520.1| PREDICTED: exonuclease 1 [Monodelphis domestica]
Length = 838
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 202/332 (60%), Gaps = 15/332 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIHIK+ +G VAVDTY WLHKGA +C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHIKKYKGQVVAVDTYCWLHKGAFACAEKLAKGEPTDQYVAFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L YG+KP+L+FDG LP K E E R R+ NL + + EG + + E +
Sbjct: 61 KFVSMLLSYGIKPVLVFDGCTLPSKKEVEKARRERRQTNLLKGKQLLREGKITEARECFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V IVAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHNMAHQVIKAARSQGVDCIVAPYEADAQLAYLNKTGIVDAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMDK G G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDKLGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLHGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KVIK H ++VP Y + F +A TF +Q V+DP +V L+
Sbjct: 240 KLLKIANNPDIIKVIKKIGHYLKMNITVPEEYVKGFIRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLD 318
D+I D D A IA+G+ D
Sbjct: 300 AYEDDINPDTLHYAGQYTDDTTAFQIALGNKD 331
>gi|213404598|ref|XP_002173071.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
gi|212001118|gb|EEB06778.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
Length = 566
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 201/335 (60%), Gaps = 10/335 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG++GLL LLK I P HI+E G + VD Y WLHKG +C++EL + T ++I Y M
Sbjct: 1 MGVKGLLGLLKDIQKPSHIEEFSGKTLGVDAYVWLHKGVFACAKELAFNIETDKYIQYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HR+++L +YGVKP ++FDGG LP K+ E KR RKE L + +EG S +
Sbjct: 61 HRISMLTYYGVKPFVVFDGGPLPSKLGTEEKRRARRKEALELGKKLWNEGKRSQAMMHLS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D++P +A+ L+Q N+ ++VAPYEAD Q+ +L + ++ +ITEDSD++ FG
Sbjct: 121 RSIDVTPEMANRFAMTLRQNNIPFVVAPYEADPQLVYLEKTGFIDGIITEDSDMLIFGAR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FK+D FG + + + ++S GF ML + I SGCDY + G+GLK+A
Sbjct: 181 TVLFKLDNFGNCDVVRREDIPRLPNMSLQGFNDHMLRYLAIFSGCDYTDGIGGIGLKKAI 240
Query: 241 ALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I +F D I+ ++ +++VP +E +F A FQHQRVY P+ + +VHL+ +
Sbjct: 241 RFIQRFPKPDAAIRAMRAERSLNVPIDFEHTFTLADKAFQHQRVYCPQQQRLVHLNDVVG 300
Query: 300 N--------IGNDLD-FLAKGIAIGDLDPFTQLPF 325
+G +D +A+ IAIG+++P T+ F
Sbjct: 301 TLDEIEEAFVGLPIDEEIARQIAIGEMNPITKEKF 335
>gi|444708439|gb|ELW49502.1| Exonuclease 1 [Tupaia chinensis]
Length = 799
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 212/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACADKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E+ R R+ NL + + EG S + + +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVESSRRERRQANLLKGKQLLREGKISEARDCFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHQVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIIKVIKKIGHYLKMNIAVPDDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D+I + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDIDPETLSYAGRYVDDSIAFQIALGNKDINT---FEQIDD 340
>gi|148227124|ref|NP_001083827.1| exonuclease 1 [Xenopus laevis]
gi|54035218|gb|AAH84102.1| EXOI protein [Xenopus laevis]
Length = 734
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 206/333 (61%), Gaps = 17/333 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL LK P+H+K+ +G VAVDTY WLHKGA +C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFLKEASEPVHVKKYKGKTVAVDTYCWLHKGAFACAEKLAKGEPTDQYVQFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +GVKPIL+FDG LP K + E R R+ NL + + EG + + E +
Sbjct: 61 KLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQTNLQKGKQLLREGKLAEARECFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ S+AHE+I+ + + V YIVAPYEAD+Q+ +L + EA+ITEDSDL+ FGC
Sbjct: 121 RSVNITSSMAHEVIKAARSEGVDYIVAPYEADSQLAYLNKNDFAEAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++ KMDKFG G+E + + L FT++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 KVLLKMDKFGNGLEIDQARFGMCRSLG-DVFTEEKFRYMCILSGCDYLPSIHGIGLAKAC 239
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ + D K+ ++LK + ++VP Y E F +A TF +Q V+DP ++ L
Sbjct: 240 KLLKVANNPDITKVIQKIGQYLK-TNITVPEGYIEGFLRANNTFLYQLVFDPVERKLIPL 298
Query: 295 SCISDNIG---------NDLDFLAKGIAIGDLD 318
+ +++ N D +A IA+G++D
Sbjct: 299 NPYGNDVNPEELNYAGPNMGDSVALQIALGNMD 331
>gi|258564967|ref|XP_002583228.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906929|gb|EEP81330.1| predicted protein [Uncinocarpus reesii 1704]
Length = 746
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 231/408 (56%), Gaps = 33/408 (8%)
Query: 1 MGIQGLLP-----------------LLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCS 43
MGI G+LP LKSI P +IK+ +G + VD Y WLH+G+++ +
Sbjct: 1 MGIAGMLPTTYCLAYLLTAIIGLHSFLKSIQKPCNIKKFKGQTLGVDAYGWLHRGSIAFA 60
Query: 44 RELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARA 103
+L T+++I++ MHRV +L +YGV P L+FDGG LP K E RA R+E+ A
Sbjct: 61 LDLALDRQTTKYINFAMHRVRMLLYYGVTPYLVFDGGRLPSKDSTEEARAARREESRALG 120
Query: 104 IECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ 163
+E G ++ + + QKA+D++P +A LI+ LK+ N+ YIVAPYEADAQ+ +L
Sbjct: 121 LEHYRTGRAAQAQQELQKAIDVTPYMARVLIEELKKLNIQYIVAPYEADAQLVYLEKEGI 180
Query: 164 VEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ +I+EDSD++ FG ++ K+DK G +E + L +D SF G+T + +MCILS
Sbjct: 181 INGIISEDSDMLVFGARILVSKLDKHGDCIEISRNNLSACRDASFAGWTDENFRQMCILS 240
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQR 282
GCDYL ++PG+GLK ++ + K+K+ ++V+K ++Y VP Y E F +A LTF HQR
Sbjct: 241 GCDYLPNIPGLGLKTSYRNLRKYKTVERVVKMVQYGGQTRVPSNYLEEFRRAELTFLHQR 300
Query: 283 VYDPKTEDIVHLSCISDNIGNDLDF--------LAKGIAIGDLDPFTQLPFQ---EVSDN 331
V+ P+ +V L+ + +I +L F +A GIA G+LDP T+ P + +
Sbjct: 301 VFCPRARKLVTLNPLPHHIQGELPFIGSDIGSEIAIGIACGELDPITKKPIELKPVYLER 360
Query: 332 SHLVVGQNSHLKNFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
+ + G+ P + K + P+ K+ + PN +P
Sbjct: 361 ARTMYGRRQTF----PAPDEKGRNKPISSFFTPKRVPLSELDPNSLTP 404
>gi|82119986|sp|Q9W6K2.1|EXO1_XENLA RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I
gi|4884906|gb|AAD31867.1|AF134570_1 exonuclease ExoI [Xenopus laevis]
Length = 734
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 206/333 (61%), Gaps = 17/333 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL LK P+H+K+ +G VAVDTY WLHKGA +C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFLKEASEPVHVKKYKGKTVAVDTYCWLHKGAFACAEKLAKGEPTDQYVQFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +GVKPIL+FDG LP K + E R R+ NL + + EG + + E +
Sbjct: 61 KLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQTNLQKGKQLLREGKLAEARECFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ S+AHE+I+ + + V YIVAPYEAD+Q+ +L + EA+ITEDSDL+ FGC
Sbjct: 121 RSVNITSSMAHEVIKAARSEGVDYIVAPYEADSQLAYLNKNDFAEAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++ KMDKFG G+E + + L FT++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 KVLLKMDKFGNGLEIDQARFGMCRSLG-DVFTEEKFRYMCILSGCDYLPSIHGIGLAKAC 239
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ + D K+ ++LK + ++VP Y E F +A TF +Q V+DP ++ L
Sbjct: 240 KLLKVANNPDITKVIQKIGQYLK-TNITVPEGYIEGFLRANNTFLYQLVFDPVERKLIPL 298
Query: 295 SCISDNIG---------NDLDFLAKGIAIGDLD 318
+ +++ N D +A IA+G++D
Sbjct: 299 NPYGNDVNPEELNYAGPNMGDSVALQIALGNMD 331
>gi|440633917|gb|ELR03836.1| hypothetical protein GMDG_01365 [Geomyces destructans 20631-21]
Length = 775
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 200/332 (60%), Gaps = 10/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P ++K+ G + VD Y WLH+G +SC+ +L G PT + +D+ M
Sbjct: 1 MGISGLLPLLKSIHKPCNLKKFAGQTIGVDAYGWLHRGTISCTMDLVMGKPTRKFVDFAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L+H+GV P LIFDG LP K E R + R + +E + G + + Q
Sbjct: 61 HRVRMLQHFGVIPFLIFDGDYLPSKAATEADRNKRRAASKTLGLELLNAGKVAQANLELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P +A +LI L V YIVAPYEADAQM +L ++ +++EDSDL+ FG
Sbjct: 121 KAVDVTPEMARQLIDELNMAGVQYIVAPYEADAQMVYLEKKGVIDGILSEDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+D++G +E + +D++ G++++ +M ILSGCDYL S+ MGLK A+
Sbjct: 181 CLLTKLDQYGNCIEINQADFSACRDINLAGWSEKEFRQMAILSGCDYLSSITNMGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+I K K+ +KVI+ L++ VP Y ++F +A LTF HQRV+ P +V +
Sbjct: 241 RMIRKHKNVEKVIRMLQFDGKYHVPKDYLDNFYQAELTFLHQRVFCPIANKVVFHTEPEQ 300
Query: 300 NIGND-LDF--------LAKGIAIGDLDPFTQ 322
I + L F +AK +A G+L+P T+
Sbjct: 301 PIDEEKLTFIGAHVEAEIAKKVATGELNPMTK 332
>gi|330921374|ref|XP_003299400.1| hypothetical protein PTT_10376 [Pyrenophora teres f. teres 0-1]
gi|311326983|gb|EFQ92536.1| hypothetical protein PTT_10376 [Pyrenophora teres f. teres 0-1]
Length = 725
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 225/393 (57%), Gaps = 17/393 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKS+ P ++K+ G + VDTY WLH+G +C+ +L PT++++D+ M
Sbjct: 1 MGISGLLPLLKSVQKPCNLKKYAGQTIGVDTYGWLHRGTAACAIDLALDKPTTKYVDFVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L H+G+ P L+FDG LP K E R RKE +E G ++ + + Q
Sbjct: 61 NRVRMLIHFGITPYLVFDGDNLPSKAGTEKDRRERRKEGKRLGLELLKVGKAAQAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I+ LK N+ Y+VAPYEAD+Q+ +L + V++EDSDL+ FG
Sbjct: 121 KSVDVTPEMARMVIEELKHHNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I K+DK+G +E + +++SF G++ MCILSGCDYL + G+GLK AH
Sbjct: 181 CLITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCILSGCDYLPGIGGLGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ K K+ D+++K ++ + VP + F +A TF +Q VY P + +V+L+ + D
Sbjct: 241 RMLRKHKTVDRLVKAAQFDGKLKVPAGFMADFDQAEKTFLYQWVYCPIDKKLVNLTSMDD 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQLPFQEVSD----NSHLVVGQNSHLKNFK 346
I D+ + LA G+A GDL P T+LP S+ LV + S
Sbjct: 301 GISLADMPYLGEEVPSELATGVARGDLYPRTKLPMNVASNTKPSGQPLVPSRGSSAIVQT 360
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
P+++ K P+ K+ +SPN F+P
Sbjct: 361 PDAKASK---PIDSFFKPKRTPLAELSPNCFTP 390
>gi|451855203|gb|EMD68495.1| hypothetical protein COCSADRAFT_33392 [Cochliobolus sativus ND90Pr]
Length = 725
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 176/567 (31%), Positives = 288/567 (50%), Gaps = 55/567 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKS+ P +K+ G + VDTY WLH+ +C+ +L PT++++D+ M
Sbjct: 1 MGISGLLPLLKSVQKPGSLKKYAGQTIGVDTYGWLHRATAACAIDLALDKPTTKYVDFVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+GV P L+FDG LP K E R RKE+ +E G + + + Q
Sbjct: 61 HRVRMLIHFGVTPYLVFDGDNLPSKAGTEKGRRERRKESKRLGLELLKVGKVAQAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I+ LK+ N+ Y+VAPYEAD+Q+ +L + V++EDSDL+ FG
Sbjct: 121 KSVDVTPEMARMVIEELKKNNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I K+DK+G+ +E + +++SF G++ M ILSGCDYL + G+GLK AH
Sbjct: 181 CLITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ K K+ D+++K ++ + VP + ESF +A TF +Q VY E +V+L+ + D
Sbjct: 241 RMLRKHKTVDRLVKAAQFDGKLKVPAGFMESFDQAEKTFLYQWVYCTVEEKLVNLTPLGD 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQLPFQEV----SDNSHLVVGQNSHLKNFK 346
+ D+ + LAKG+A+GDL P ++LP + S + L + S
Sbjct: 301 GVNIADMPYIGEEVPPHLAKGVALGDLYPRSKLPMEVTGKSKSSSQPLAPSRRSSAIMQT 360
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSR 406
P+++ K P+ K+ +SPN F+P SP + E S ++
Sbjct: 361 PDAKNTK---PIDSFFKPKRTPLAELSPNLFTP------SPSQQVLLEQQRISSGWAA-- 409
Query: 407 MELETVGNFPHNSSEKNCFASEVPEFSASPSREMENERNAEHTSLPQFCRSIRNPCPALR 466
VP +P ++ + ++ PQ R+I +P R
Sbjct: 410 ----------------------VP----APISRLQQQYPPPPSTAPQPRRTITDPIGGRR 443
Query: 467 KEHENKN---CTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDM 523
+K C+DS+ T + +VRS +F ++++K + D I +
Sbjct: 444 SVPPSKRPRLCSDSIFDTP-TAGGEDVVRSQFFASSTPEPSPTLHRRKKSRRKTDQDIQL 502
Query: 524 SENTGLQSAHFDYSYLKGTAIKRKTSL 550
+ +Q + + L+ TA +RK L
Sbjct: 503 YSDDSIQEGEVEAADLEQTASQRKNKL 529
>gi|350633529|gb|EHA21894.1| 5'-3' exonuclease [Aspergillus niger ATCC 1015]
Length = 672
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 268/512 (52%), Gaps = 44/512 (8%)
Query: 5 GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVN 64
GL LLKSI P H+K+ G + +D Y WLH+G ++C+ +L PT +HID+ ++RV
Sbjct: 1 GLHGLLKSIQKPCHLKKFSGQTLGIDAYGWLHRGTVACAVDLVLERPTRKHIDFVLNRVR 60
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L ++GV P L+FDG LP K E +R + R+++ A +E + +G + +Y+ QKAVD
Sbjct: 61 MLLYFGVTPYLVFDGDELPSKAGTEVERQKRRQDSKALGLELQRKGRIAEAYQELQKAVD 120
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P +A ELI+ LK+ NV Y+VAPYEADAQ+ +L + +I+EDSDL+ FG R++
Sbjct: 121 VTPLMARELIEELKKINVQYVVAPYEADAQLAYLERQGVISGIISEDSDLLVFGAKRLLS 180
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D+ G +E + +++S G+T MCILSGCDYL ++ +GLK A+ I
Sbjct: 181 KLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCILSGCDYLPNIARLGLKTAYRSIR 240
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI-SDNIG 302
K+K+ ++ ++ L++ VP Y ++F +A LTF +QRV+ PK +V L+ ++ I
Sbjct: 241 KYKNVERALRMLQFDGQYHVPSDYLDNFRQAELTFLYQRVFCPKAGKLVTLTPPEAEIIL 300
Query: 303 NDLDF--------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERKKL 354
DL F +A G+A GDLDP T+ P V S + L N S R+ L
Sbjct: 301 EDLTFIGGDVEPDIAVGVARGDLDPTTKEPL--VLKPSLAAKPADKRLTNTI--SRRQTL 356
Query: 355 --------DLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSR 406
+ P+ K+ + PN SP + H A +S D S + SR
Sbjct: 357 GSSAELKPNKPINSFFTPKRVPLAELDPNSLSPSPSQQRLLQRH--ANSSWD-SVPAPSR 413
Query: 407 MEL----ETVGNFPHNSS------EKNCFASEVPEFS-ASPSREMENERNAEHTSLPQ-- 453
L +VG+ SS E+N F + S P++ +AE +LP
Sbjct: 414 PALIRSASSVGSSNRASSPLIRSVERNAFLAHASRTSNLQPAKRQRLCSDAEEANLPNPP 473
Query: 454 ------FCRSIRNPCPALRKEHENKNCTDSVV 479
F S+ + P+ +K K S +
Sbjct: 474 DCRSRFFSGSVDDSSPSAQKATRTKKARKSTL 505
>gi|395531535|ref|XP_003767833.1| PREDICTED: exonuclease 1 [Sarcophilus harrisii]
Length = 833
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 207/354 (58%), Gaps = 26/354 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIHIK+ +G VAVDTY WLHKGA +C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKDASEPIHIKKYKGQVVAVDTYCWLHKGAFACAEKLAKGEPTDQYVAFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG + + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVEKARRERRQTNLLKGKQLLREGKITEARECFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ +AH++I+ + Q V IVAPYEADAQ+ +L + V A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHRMAHQVIKAARAQGVDCIVAPYEADAQLAYLNKTGIVHAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMDK G G+E + L + L FT++ MC+LSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDKLGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCVLSGCDYLSSLHGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KVIK H ++VP Y + F +A TF +Q V+DP +V L+
Sbjct: 240 KLLKIANNPDIIKVIKKIGHYLKMNITVPEEYIKGFIRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIG-NDL--------DFLAKGIAIG-----------DLDPFTQLPFQEVS 329
D+I N L D A IA+G D +P T +P Q S
Sbjct: 300 AYEDDIDPNTLHYAGQYLDDTTAFQIALGNKDINTMEQIDDYNPDTAMPHQSRS 353
>gi|359320017|ref|XP_003639234.1| PREDICTED: exonuclease 1-like [Canis lupus familiaris]
Length = 836
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L +G PT +++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLARGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KP+LIFDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPVLIFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPVRRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D+I + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDIDPETLSYAGQYFDDSIALQIALGNKDINT---FEQIDD 340
>gi|145531403|ref|XP_001451468.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419123|emb|CAK84071.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 244/454 (53%), Gaps = 39/454 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LL LKS+ P HI E +AVDTY WLHKG C++EL +G T+ HI+YC+
Sbjct: 1 MGIDSLLKALKSVTKPRHISEYSNKKIAVDTYCWLHKGIFLCAQELSEGRETNEHINYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V L+ Y + +++FDG LP K E +R + R +NL + +E + G +Y
Sbjct: 61 KKVEQLKKYNITVVMVFDGAKLPSKKSTEEEREKRRNDNLQKHLEFKQLGEKDKAYSKLV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D++P +A L+ L+ +N+ IVAPYEADAQ+ +L++++ V+ +ITEDSDLI +G
Sbjct: 121 ESIDVTPQMASRLLDALRTRNIECIVAPYEADAQLAYLSITEYVDVIITEDSDLIAYGAR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++++K+DKFG G E +Q + +F + Q L CILSGCDYL S+ G+G+KRA+
Sbjct: 181 KVLYKLDKFGYGEEIDYESIQTCTEYNFQNWHHQKFLTFCILSGCDYLGSISGIGIKRAY 240
Query: 241 ALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+++ ++Y + I +L + VSVP Y E F KA LTF QRV+ P +V ++
Sbjct: 241 QVVATSQNYKQAIDNLQRKQKVSVPFDYVEQFEKAYLTFLFQRVFCPVQRKMVSVNTFDT 300
Query: 300 NI----------GNDLDFLA--------KGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSH 341
++ GN LDFL + IA G + P P+ + S N + Q S
Sbjct: 301 DLLYPQMKSLLEGN-LDFLGNVYTDTLIQDIADGRICPQDLKPYSQSSKN----LKQQS- 354
Query: 342 LKNFKPESERKKLDL-------PVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAE 394
L N + +L++ PVQ KK + +I+P E S GE
Sbjct: 355 LDNKQQNENNDQLEIPTFGNSRPVQVFKFIKKSQSTKINP------EESFERSGESKVIN 408
Query: 395 ASCDISCQSSSRMELETVGNFPHNSSEKNCFASE 428
S I+ +S+ E + N + N F+S+
Sbjct: 409 QSQIINSKSTEDNEKYLIEN-QQIQEQSNLFSSQ 441
>gi|189200895|ref|XP_001936784.1| exodeoxyribonuclease 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983883|gb|EDU49371.1| exodeoxyribonuclease 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 724
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 228/393 (58%), Gaps = 17/393 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKS+ P ++K+ G + VDTY WLH+G +C+ +L PT++++D+ M
Sbjct: 1 MGISGLLPLLKSVQKPCNLKKYAGQTIGVDTYGWLHRGTAACAIDLALDKPTTKYVDFVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV++L H+G+ P L+FDG LP K E R RKE +E G ++ + + Q
Sbjct: 61 NRVHMLIHFGITPYLVFDGDNLPSKAGTEKDRRERRKEGKRLGLELLKVGKAAQAQQELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I+ LK N+ Y+VAPYEAD+Q+ +L + V++EDSDL+ FG
Sbjct: 121 KSVDVTPEMARMVIEELKHHNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I K+DK+G +E + +++SF G++ MCILSGCDYL + G+GLK AH
Sbjct: 181 CLITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCILSGCDYLPGIGGLGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ K K+ D+++K +++ + VP + F +A TF +Q VY P + +V+L+ ++D
Sbjct: 241 RMLRKHKTVDRLVKAVQFDGKLKVPAGFMADFDQAEKTFLYQWVYCPIDKKLVNLTPVND 300
Query: 300 NIG-NDLDF--------LAKGIAIGDLDPFTQLPFQEVSDN----SHLVVGQNSHLKNFK 346
I D+ + LA G+A GDL P T+LP S+ LV + +
Sbjct: 301 GISLADMPYLGEEVPSDLATGVARGDLYPRTKLPMNVDSNTKPSGQPLVPSRRASAVVQT 360
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
P+++ K P+ K+ +SPN F+P
Sbjct: 361 PDAKGSK---PIDSFFKPKRTPLAELSPNCFTP 390
>gi|301766172|ref|XP_002918504.1| PREDICTED: exonuclease 1-like [Ailuropoda melanoleuca]
gi|281346532|gb|EFB22116.1| hypothetical protein PANDA_006967 [Ailuropoda melanoleuca]
Length = 842
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 204/332 (61%), Gaps = 15/332 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIHGLLQFIKDASEPIHVRKYKGQAVAVDTYCWLHKGAIACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPILIFDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILIFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A++TEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIVTEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y E F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLASNPDIVKVIKKIGHYLKMNITVPEDYIEGFIRANNTFLYQLVFDPIGRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLD 318
D+I + D +A IA+G+ D
Sbjct: 300 AYEDDIDPETLSYAGQYFDDSVALQIALGNKD 331
>gi|328774002|gb|EGF84039.1| hypothetical protein BATDEDRAFT_7998 [Batrachochytrium
dendrobatidis JAM81]
Length = 319
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 192/303 (63%), Gaps = 10/303 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK I +H+ G V VD Y WLHKGA +C+ ELC+ +PT+++I YC+
Sbjct: 1 MGISGLLPLLKDIHRSVHLSNYSGQAVGVDAYVWLHKGAFACASELCQNIPTTKYITYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++V L+++ + PI++FDG LP+K+ EN R + R+ + A+ E G + + +Q
Sbjct: 61 NKVRQLQNHNIWPIIVFDGDRLPIKMRTENDRHKRREISRAKGFEYLRAGQRDKAQDCFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
VD++P +AHELI+ L+ N+ YIVAPYEADAQ+T+L + A+ITEDSDL+ FGCS
Sbjct: 121 TCVDVTPRMAHELIKELRANNIEYIVAPYEADAQLTYLNKIGDISAIITEDSDLLVFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I K+D G G+E + + K++ F ++ MCILSGCDYL+S G+G+K++
Sbjct: 181 KVILKLDHQGNGIEIRQEDIANIKEMRF--WSSDKFRHMCILSGCDYLESPQGIGIKKSI 238
Query: 241 ALISKFK----SYDKVIKHLKYSTVS----VPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
L++K + S D + K ST + +PP Y F A FQHQRVYDP+ +V
Sbjct: 239 KLLAKCEAATVSDDAMYKIYSTSTTANSPKLPPNYYSRFMLADFAFQHQRVYDPQQGILV 298
Query: 293 HLS 295
L+
Sbjct: 299 PLT 301
>gi|410985751|ref|XP_003999180.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1 [Felis catus]
Length = 846
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 207/339 (61%), Gaps = 17/339 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ +AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHVMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H + VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNIMVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIG--DLDPFTQL 323
D+I + D +A IA+G D++ F Q+
Sbjct: 300 AYEDDIDPETLSYAGQYFDDSIALQIALGNKDINTFEQI 338
>gi|440904888|gb|ELR55344.1| Exonuclease 1 [Bos grunniens mutus]
Length = 833
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 209/354 (59%), Gaps = 26/354 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIHI++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHIRKYKGQVVAVDTYCWLHKGAVACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFI 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSINITHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KV++ H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KLLRLANNPDILKVVRKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIG-----------DLDPFTQLPFQEVS 329
D++ + D +A IA+G D +P T +P Q S
Sbjct: 300 AYEDDVDPKILSYAGQYVDDSIALQIALGNKDINTLEQIDDYNPDTAMPAQSRS 353
>gi|336375373|gb|EGO03709.1| hypothetical protein SERLA73DRAFT_101960 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388429|gb|EGO29573.1| hypothetical protein SERLADRAFT_445364 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/300 (44%), Positives = 184/300 (61%), Gaps = 6/300 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LKSI I H+ E G +AVD Y WLH+G +C EL G T++++DY M
Sbjct: 1 MGISGLLPSLKSIQINKHLSEFSGQTLAVDAYVWLHRGIFTCPTELATGKTTTKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LLRH+ ++P ++FDGG LP K E +R + R ENLA+A +G + + E+Y
Sbjct: 61 HRVRLLRHHKIQPYIVFDGGPLPAKKGTEAERKQRRDENLAKANALAVQGKHTQAREYYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A +LI+ L+ + V Y+VAPYEADAQM +L V+ +ITEDSDL+ FGC
Sbjct: 121 KCVDVTPQMAFQLIKALRAEGVPYVVAPYEADAQMAYLERIGLVDGIITEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEFQC-----SMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
++FK+D + S+ +S G++ M ILSGCDYL S+PG+G
Sbjct: 181 NVLFKLDSVSSTITSISRADFGSVTATEGGISLHGWSDSQFRAMAILSGCDYLPSIPGVG 240
Query: 236 LKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
LK A L+ K K+ D+VI+ L+ +VP Y E++ A F HQRVY P E +V L
Sbjct: 241 LKTAWTLLRKHKTADQVIRALRLEGKKAVPRGYLEAYKLAEKVFLHQRVYCPLDEKLVSL 300
>gi|121705316|ref|XP_001270921.1| exonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119399067|gb|EAW09495.1| exonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 664
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 257/490 (52%), Gaps = 55/490 (11%)
Query: 5 GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVN 64
GL LLKSI P H+K+ G + VD Y WLH+G ++C+ +L P ++H+D+ ++RV
Sbjct: 7 GLHGLLKSIQKPCHLKKFNGQTLGVDAYGWLHRGTVACAVDLVLERPNTKHLDFVLNRVR 66
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L +GV P L+FDG LP K E++R + R+ + A +E + +G ++ +Y+ QKAVD
Sbjct: 67 MLLFFGVTPYLVFDGDDLPSKSGTESERLQRRQASKALGLELQRKGRTAEAYQELQKAVD 126
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P++A +LI+ LK+ V Y+VAPYEADAQ+ +L ++ +I+EDSDL+ FG R++
Sbjct: 127 VTPNMARQLIEELKKMEVQYVVAPYEADAQLVYLEREGIIDGIISEDSDLLVFGAKRLLS 186
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D+ G+ +E + +++S G+T MCILSGCDYL ++P MGLK A+ I
Sbjct: 187 KLDQHGECIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLANIPRMGLKTAYRSIR 246
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS-----CIS 298
K+K+ +K I+ L++ VP Y + F +A LTF +QRV+ PK +V L+ I
Sbjct: 247 KYKNVEKSIRMLQFDGQYQVPADYLKKFQQAELTFLYQRVFCPKAGKLVTLTPPEKDIIL 306
Query: 299 DN---IGNDLDF-LAKGIAIGDLDPFTQ-----------LPFQEVSDNSHLVVGQNSHLK 343
D IG D+D +A GIA GDL P T+ P ++ L G ++ LK
Sbjct: 307 DELPFIGGDVDPEIAVGIARGDLHPTTKQEIVLKPLAPRRPLNAITRRQTL--GSSAELK 364
Query: 344 NFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQS 403
K P+ K+ + PN +P SP + E + S +
Sbjct: 365 AKK----------PIDTFFTPKRVPLAELDPNSLTP------SPSQQRLLERHANTSWEG 408
Query: 404 -SSRMELETVGNFPH------------NSSEKNCFASEVPEFSA-SPSREMENERNAEHT 449
++ VG+ P S E+N F + + S P++ E
Sbjct: 409 RAAPSRPGVVGSAPVPGLSHRISSPLIRSVERNSFLAHAAKVSTFQPAKRQRLCAETEEE 468
Query: 450 SLPQF--CRS 457
SLP CRS
Sbjct: 469 SLPDRADCRS 478
>gi|426239609|ref|XP_004013712.1| PREDICTED: exonuclease 1 [Ovis aries]
Length = 835
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 212/355 (59%), Gaps = 15/355 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHMRKYKGQVVAVDTYCWLHKGAVACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++++ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSINVTHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KVI+ H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KLLRLANNPDILKVIRKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIERKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSH 341
D++ + D +A IA+G+ D T + + ++ ++ SH
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINTLEQIDDYNPDTAMLAQSRSH 354
>gi|320580512|gb|EFW94734.1| exodeoxyribonuclease 1 [Ogataea parapolymorpha DL-1]
Length = 1767
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 202/338 (59%), Gaps = 15/338 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP LKSI H+++ G +A+DTY+WLHK C+ E+ PT +++Y
Sbjct: 1 MGVTGLLPALKSIQEVSHLEKYRGKTLAIDTYAWLHKAIYGCAMEIVLEKPTRAYLNYMN 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+++ HYG+ P ++ DG LP K E +R RKE +E S +Y ++
Sbjct: 61 RRLDMSAHYGITPYMVLDGDYLPTKANTEKEREGRRKEYKRLGLEALRANKRSEAYNYFN 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA DI+P IA +I+ LK +N+ Y+VAPYEADAQM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KACDITPQIAKSVIEALKSRNIQYVVAPYEADAQMVYLEKHGIVQGIISEDSDLLIFGCQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R+I K+D G +E + + ++ + G F+ + L M I+SGCDY + +P +G++RA
Sbjct: 181 RLITKLDDSGACIEVRRDKFKDCRESAIGLFSNEQLKLMAIVSGCDYTKGIPNVGMQRAI 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L++++ + ++++ ++Y + VP +E + +A+ F HQ V+DP+T+ VHL+ +S
Sbjct: 241 NLVNRYSTIGRLLQAVRYEGKLKVPVEFETEYYRAITAFNHQVVFDPRTQKPVHLNPLSP 300
Query: 300 NIGNDL------------DFLAKGIAIGDLDPFTQLPF 325
+D+ D L + IAIG+LDP T+LP
Sbjct: 301 E--DDILEVERCAGKIHDDELHRKIAIGELDPITKLPL 336
>gi|409048552|gb|EKM58030.1| hypothetical protein PHACADRAFT_90326 [Phanerochaete carnosa
HHB-10118-sp]
Length = 320
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/313 (41%), Positives = 189/313 (60%), Gaps = 9/313 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK I H+ E G +AVD Y WLH+G +C+ +L G T+++++Y M
Sbjct: 1 MGISGLLPLLKPIQKHKHLSEYSGQTIAVDAYVWLHRGTYACATDLATGKKTTKYVNYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LL+HY + P ++FDGG L K E+ R + R+ENLARA ++G + + E+Y
Sbjct: 61 HRVRLLKHYNIIPYIVFDGGPLSAKKGTESDRKKKREENLARANSLAAQGKHTQAREYYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +D++P +A + I+ L+ +NV+Y+VAPYEADAQM +L V+ ++TEDSDL+ FGC
Sbjct: 121 KCIDVTPQMAFQFIKALRAENVAYVVAPYEADAQMAYLERIGLVDGILTEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGV------EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
++ K+D V +F +S G++ M ILSGCDYL S+P +
Sbjct: 181 SVLLKLDTVESTVISISRQDFASLTASSGGGISLLGWSDVQFRAMAILSGCDYLPSIPSV 240
Query: 235 GLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
GLK A +L+ K + VI+ L+ S+P Y ++F A F HQRVYDP + +VH
Sbjct: 241 GLKTAWSLLRKHGCVENVIRALRIEGKKSIPQGYLQAFRLAEKVFLHQRVYDPLKDMLVH 300
Query: 294 LSCISDNIGNDLD 306
LS + D G D D
Sbjct: 301 LSPLPD--GEDWD 311
>gi|145532383|ref|XP_001451947.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419624|emb|CAK84550.1| unnamed protein product [Paramecium tetraurelia]
Length = 570
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 249/463 (53%), Gaps = 49/463 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSW--------LHKGALSCSRELCKGLPT 52
MGI LL LKS+ P HI E + +AVDTY W LHKG C++EL G T
Sbjct: 1 MGIDSLLKALKSVTKPKHISEYQNKKIAVDTYCWYFEHLQFRLHKGIFLCAQELSDGRET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ HI+YC+ +V LL+ Y + +++FDG LP K E +R + R +NL + +E + +G
Sbjct: 61 NEHINYCLKKVELLKKYNITVVMVFDGAKLPSKKTTEEEREKKRNDNLQKHLEFKQQGEK 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+Y+ +++D++P +A +L++ L+ +N+ IVAPYEADAQ+ +L++++ V+ +ITEDS
Sbjct: 121 DKAYQKLVESIDVTPQMASKLLEALRIRNIECIVAPYEADAQLAYLSLTEYVDVIITEDS 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
DLI +G ++++K+DKFG G E + + + +F + Q L CILSGCDYL SL
Sbjct: 181 DLIAYGAKKVLYKLDKFGYGEEIDYNSISSCTEYNFQNWHHQKFLTFCILSGCDYLSSLS 240
Query: 233 GMGLKRAHALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G+KRA+ +++ ++Y + I +L + ++VP Y E F KA LTF QRV+ P +
Sbjct: 241 GIGIKRAYQIVATSQNYKQAIDNLQRKQKITVPFDYVEQFEKAYLTFLFQRVFCPVQRKM 300
Query: 292 VHLSCISDNI----------GNDLDFLA--------KGIAIGDLDPFTQLPFQEVSDNSH 333
V ++ ++ GN LDFL + IA G + P P+ + S N
Sbjct: 301 VSVNTFDTDLLYSQMKSLLEGN-LDFLGNVYTDTLIQDIADGKICPQDLKPYSQSSKNLK 359
Query: 334 LVVGQNSHLKNFKPESERKKLDLP-------VQKNLLTKKFTTPRISPNHFSPE-ETSSL 385
+N K +++ +LD+P VQ KK + +I+P + E +
Sbjct: 360 YQNMEN------KYQNDNNELDIPTFGKDKNVQVFKFIKKSQSTKINPEENAERVEDQKI 413
Query: 386 SPGEHHTAEASCDISCQSSSRMELETVGNFPHNSSEKNCFASE 428
P +I+ +S +L +N + N F+S+
Sbjct: 414 KPQSQVIHSKQTEINEKSQIEQQL-------YNYEQSNIFSSQ 449
>gi|449680108|ref|XP_002160163.2| PREDICTED: exonuclease 1-like [Hydra magnipapillata]
Length = 687
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 211/361 (58%), Gaps = 11/361 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK I + I +G V +D Y WLHKG C++++ G PT +I Y M
Sbjct: 1 MGILGLLPLLKDIQVKTSISSFKGQTVGIDAYCWLHKGTYGCAKDVVLGQPTKVYIQYVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RVN+L +Y + PIL+FDGG LP K E+E +R R E ARA+E GNS ++E +Q
Sbjct: 61 RRVNMLINYDITPILVFDGGHLPAKSEKEKERREKRIEYRARALEALRNGNSKEAFESFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K DI+P +A +IQ + NV IVAPYEADAQ+ FL S + I+EDSDL+ +GC+
Sbjct: 121 KCCDITPEMAANVIQACFEMNVQCIVAPYEADAQLAFLMKSGITQLTISEDSDLLLYGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++++KM G G+ L K + + FT +MC+LSGCDYL S+ GMGLK+AH
Sbjct: 181 KVLYKMSSEGDGMLVDIDNLSKVRSVQLSSFTLDNFRQMCMLSGCDYLPSIKGMGLKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ + + + I+ K + SVP YE++F KA L F++Q V+DP + IV L+ +
Sbjct: 241 QALKRHSNIKQCIRSFKCNPQYSVPDEYEDNFCKAELVFKYQLVFDPIRKCIVPLNEPDE 300
Query: 300 NIGND---------LDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHL-KNFKPES 349
+ + D LA IA+G++DP + ++D + + +HL +NF +
Sbjct: 301 ELNIEDTHYCGPKITDDLALNIALGNIDPISHKRLLNLTDFASGPAKKVTHLYQNFDSQQ 360
Query: 350 E 350
+
Sbjct: 361 Q 361
>gi|149748996|ref|XP_001491533.1| PREDICTED: exonuclease 1 [Equus caballus]
Length = 835
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 207/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K P H+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIHGLLGFIKDASEPTHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +GVKPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVHMLLSHGVKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHRVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDHFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y E F +A TF +Q V+DP +V L+
Sbjct: 240 KVLKLANNPDIVKVIKKMGHYLKMNITVPEDYIEGFIRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D+I + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDIAPETLSYAGRYVDDSVALQIALGNKDINT---FEQIDD 340
>gi|297484026|ref|XP_002694001.1| PREDICTED: exonuclease 1 [Bos taurus]
gi|296479294|tpg|DAA21409.1| TPA: exonuclease 1 [Bos taurus]
Length = 835
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 208/354 (58%), Gaps = 26/354 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIHI++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHIRKYKGQVVAVDTYCWLHKGAVACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFI 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSINITHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KV++ H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KLLRLANNPDILKVVRKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLD-----------PFTQLPFQEVS 329
D++ D +A IA+G+ D P T +P Q S
Sbjct: 300 AYEDDVDPKTLSYAGQYVDDSIALQIALGNKDINTLEQIDHYNPDTAMPAQSRS 353
>gi|449496989|ref|XP_002193244.2| PREDICTED: exonuclease 1 [Taeniopygia guttata]
Length = 805
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 205/336 (61%), Gaps = 23/336 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K P H+K+ +G VAVDTY WLHKGA +C+ +L +G PT ++ +CM
Sbjct: 1 MGIQGLLQFIKEAAEPSHVKKYQGLTVAVDTYCWLHKGAYACAEKLARGEPTDFYVAFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +G+KPIL+FDG LP K E E R R+ +L + + EG S + E +
Sbjct: 61 KFVHMLLSFGIKPILVFDGCTLPSKKEVEKARRERRQASLLKGKQLLQEGRLSEARECFG 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AHE+I+ + Q V IVAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHEVIKAARAQGVDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DKFG G+E + L K L FT++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 KVFLKIDKFGNGLEIDQTRLGNCKQLG-NVFTEEKFRYMCILSGCDYLPSIHGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ + D KVIK +LK + ++VP Y + F +A TF +Q V+DP +V L
Sbjct: 240 KLLKLANNPDIIKVIKKMGQYLKMN-ITVPEEYIQGFTRANNTFLYQLVFDPVNRKLVPL 298
Query: 295 SCISDNI------------GNDLDFLAKGIAIGDLD 318
+ D+I G+D F IA+G++D
Sbjct: 299 NAYGDDIDPETLTYAGRHVGDDTAF---QIAVGNID 331
>gi|119908266|ref|XP_582828.3| PREDICTED: exonuclease 1 [Bos taurus]
Length = 835
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 202/332 (60%), Gaps = 15/332 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIHI++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHIRKYKGQVVAVDTYCWLHKGAVACAEKLAKGEPTEKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFI 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSINITHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KV++ H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KLLRLANNPDILKVVRKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLD 318
D++ D +A IA+G+ D
Sbjct: 300 AYEDDVDPKTLSYAGQYVDDSIALQIALGNKD 331
>gi|449544360|gb|EMD35333.1| hypothetical protein CERSUDRAFT_66521 [Ceriporiopsis subvermispora
B]
Length = 320
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 187/302 (61%), Gaps = 7/302 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK I + + G +AVD Y WLH+G SC+ EL G T++++DY M
Sbjct: 1 MGISGLLPLLKDIQETRPLSDFAGQTLAVDAYVWLHRGTYSCAYELATGKRTNKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LLRHY ++P ++FDGG LP K E++R R EN+ARA ++G S + E+Y
Sbjct: 61 HRVRLLRHYNIEPYIVFDGGPLPAKKGTESERKARRDENIARANALAAQGKHSQAREYYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +D++P +A++ I+ L+ + V Y+VAPYEADAQ+ +L + V+ +ITEDSDL+ FGC
Sbjct: 121 KCIDVTPQMAYQFIKALRAECVPYVVAPYEADAQLAYLERTGVVDGIITEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGV------EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
++FK+D V +F + +S G++ M ILSGCDYL S+PG+
Sbjct: 181 TVLFKLDVAASTVTRVSRADFASITSGSSSGISLVGWSDVQFRAMAILSGCDYLPSIPGI 240
Query: 235 GLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
GLK A +L+ K K+ + V++ L VP Y E+F A F +QRVYDP + +V+
Sbjct: 241 GLKTAWSLLRKHKTVENVVRALNLEGKKKVPHKYLEAFRMAEKVFLYQRVYDPTQQRLVY 300
Query: 294 LS 295
L+
Sbjct: 301 LT 302
>gi|345329438|ref|XP_001514118.2| PREDICTED: exonuclease 1 [Ornithorhynchus anatinus]
Length = 799
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 188/306 (61%), Gaps = 6/306 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL LK PIH+++ G VAVDTY WLHKGA +C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFLKDASEPIHVRKYRGQVVAVDTYCWLHKGAFACAEKLAKGEPTDQYVTFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ N + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVEKARRERRQANFLKGKQFLREGKVSEARECFN 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ V+I+ ++AH++I+ + Q V IVAPYEADAQ+ +L + V A+ITEDSDL+ FGC
Sbjct: 121 RCVNITHAMAHQVIKAARSQGVDCIVAPYEADAQLAYLNKTGIVHAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMDK G +E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDKLGNALEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLPSLHGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KVIK H ++VP Y E F +A TF +Q V+DP +V L+
Sbjct: 240 RLLRTANNPDVVKVIKKMGHYLKMNITVPEDYVEGFVRANNTFLYQLVFDPVRRKLVPLN 299
Query: 296 CISDNI 301
D++
Sbjct: 300 AYEDDV 305
>gi|348535099|ref|XP_003455039.1| PREDICTED: exonuclease 1-like [Oreochromis niloticus]
Length = 776
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 198/322 (61%), Gaps = 9/322 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PI++K+ +G VAVDTY WLHKGA SC+ +L KG PT +++ YCM
Sbjct: 1 MGISGLLQFIKDAAEPINVKKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVWYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L + VKPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVDMLLTFSVKPILVFDGRNLPSKQEVEKARRERRETNLQKGRQLLREGKLSEARECFN 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ V+I+P++AH LI+ + + V +VAPYEADAQ+ +L+ S +AVITEDSDL+ FGC
Sbjct: 121 RCVNITPAMAHNLIKAARARGVDCVVAPYEADAQLAYLSKSGLAQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMDK G G+E S L + + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDKQGNGLEIDQSNLGRCRSLG-NVFTEEKFRYMCILSGCDYLASLHGIGLGKAC 239
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ K D K+ ++LK S V VP Y E F +A TF +Q V+DP +V L
Sbjct: 240 KLLQLAKDPDILRVIRKMGQYLKMSLV-VPEQYIEGFVRANNTFLYQLVFDPVRRKVVPL 298
Query: 295 SCISDNIGNDLDFLAKGIAIGD 316
+ ++I + G+ +GD
Sbjct: 299 NPYPEHI-DPATLSYAGLHLGD 319
>gi|346322204|gb|EGX91803.1| exonuclease, putative [Cordyceps militaris CM01]
Length = 763
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 203/334 (60%), Gaps = 9/334 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P +K+ G + VD Y WLH+ A SC+ EL +G PT+R++ M
Sbjct: 1 MGVSGLLPLLKSIHKPTELKKCHGQTLGVDAYGWLHRAAFSCAVELGQGKPTTRYVASAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV +L H+G+KP ++FDG LP K E+ RA+ R+E A + G S + + +Q
Sbjct: 61 HRVRMLLHFGIKPYMVFDGDYLPSKAATEDSRAKKREEKKKLANDLMKAGKPSQAAQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A LIQ LK+ ++SYIVAPYEAD+Q+ +L ++ ++++DSDL+ FG
Sbjct: 121 KCVDITPEMASTLIQELKKLDISYIVAPYEADSQLVYLERQGLIDGILSDDSDLLVFGAQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++ K+D++G +E +++S G++ M I+SGCDYL LPG+GLK A+
Sbjct: 181 RLLTKLDQYGNCIEINRRDFGACREISLSGWSDTEFRRMAIMSGCDYLNGLPGVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ K KS ++V++ L++ V Y F +A LTF HQ V+ P +VHL+ +
Sbjct: 241 RMMRKSKSPERVVRMLQFDGKRVSENYLTQFYQAELTFLHQWVFCPTQRGLVHLTELDGT 300
Query: 301 -IGNDLDF--------LAKGIAIGDLDPFTQLPF 325
++ F +A+ +A GD++P T+ P
Sbjct: 301 RTAAEMPFIGAFVEPAIARRVAAGDVNPITKEPI 334
>gi|46125331|ref|XP_387219.1| hypothetical protein FG07043.1 [Gibberella zeae PH-1]
Length = 747
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 196/331 (59%), Gaps = 9/331 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P +K+ G VD Y WLH+ A C+ EL + PT ++++ M
Sbjct: 1 MGVSGLLPLLKSIQKPTELKKYHGQTFGVDAYGWLHRAAYCCALELGQDKPTQKYLNAAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +LRH+G+ P ++FDG LP K E+ RA+ R E A+E G + + + +Q
Sbjct: 61 TRVRMLRHFGITPYMVFDGDFLPSKAATEDSRAKKRDEKKKAAMELLRAGKPAQATQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +DI+P +A LIQ+LK+ ++ Y+VAPYEADAQ+ +L + +I++DSDL+ FG
Sbjct: 121 KCIDITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++ K+D++G +E +++S G++ M I SGCDYL LPG+GLK A+
Sbjct: 181 KLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ K K +++++ +++ V Y F +A LTF HQ V+ P ++VHL+ +
Sbjct: 241 RMLRKTKVPERIVRMVQFQGKRVSENYLTQFYQAELTFLHQWVFCPTKRELVHLTDLDGT 300
Query: 301 -IGNDLDFL--------AKGIAIGDLDPFTQ 322
++ F+ A+ IA GD++P T+
Sbjct: 301 RTAEEMPFIGAFVEPEAARAIARGDMNPITK 331
>gi|408397964|gb|EKJ77101.1| hypothetical protein FPSE_02745 [Fusarium pseudograminearum CS3096]
Length = 747
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 196/331 (59%), Gaps = 9/331 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P +K+ G VD Y WLH+ A C+ EL + PT ++++ M
Sbjct: 1 MGVSGLLPLLKSIQKPTELKKYHGQTFGVDAYGWLHRAAYCCALELGQDKPTQKYLNAAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +LRH+G+ P ++FDG LP K E+ RA+ R E A+E G + + + +Q
Sbjct: 61 TRVRMLRHFGITPYMVFDGDFLPSKAATEDSRAKKRDEKKKAAMELLRAGKPAQATQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +DI+P +A LIQ+LK+ ++ Y+VAPYEADAQ+ +L + +I++DSDL+ FG
Sbjct: 121 KCIDITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++ K+D++G +E +++S G++ M I SGCDYL LPG+GLK A+
Sbjct: 181 KLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ K K +++++ +++ V Y F +A LTF HQ V+ P ++VHL+ +
Sbjct: 241 RMLRKTKVPERIVRMVQFQGKRVSENYLTQFYQAELTFLHQWVFCPTKRELVHLTDLDGT 300
Query: 301 -IGNDLDFL--------AKGIAIGDLDPFTQ 322
++ F+ A+ IA GD++P T+
Sbjct: 301 RTAEEMPFIGAFVEPETARAIARGDMNPITK 331
>gi|452819913|gb|EME26963.1| exonuclease 1 [Galdieria sulphuraria]
Length = 491
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 207/343 (60%), Gaps = 26/343 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP+L+ I IHI++ V +D YSWLHKGA C+ ELC G+ TSR++DY +
Sbjct: 1 MGIQGLLPVLRPISEAIHIQKFANKRVGIDGYSWLHKGAFGCALELCTGVSTSRYLDYFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +L +Y V P+++FDG LP+K E E R SR+ L + + E + + E +Q
Sbjct: 61 ERIKMLLYYNVVPVVVFDGARLPVKSETEAIRRESREMYLEKGKKLMKEKKWTHAVECFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AV+I+P +AH++ QVL + ++ VAPYEADAQ+ +L +V+AVITEDSDLI +G +
Sbjct: 121 RAVNITPIMAHQVSQVLIEMGIAVTVAPYEADAQLAWLCFQNEVDAVITEDSDLIAYGVN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RII+KM + G G L + L+ FT+ ML M I++GCD+ + G+G+K+AH
Sbjct: 181 RIIYKMGRSGDGFLISRKNLGALEGLALSYFTQDMLQLMSIIAGCDFFPGIRGLGIKKAH 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFY-----EESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ ++ + D+V LK + P F E KA++TF++QRVYD + + +V L+
Sbjct: 241 EIVKRYHTLDRVFWFLKNN----PKFQVEQDDRERMAKALMTFKYQRVYDHRHQKLVFLT 296
Query: 296 CISDN---------IGNDLDFLA--------KGIAIGDLDPFT 321
+ +N + +L+FL +GIA G L P T
Sbjct: 297 QLRENDPLVHSMMKVDANLEFLGPLIPDDIVQGIAQGRLHPCT 339
>gi|392589296|gb|EIW78627.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 318
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 199/316 (62%), Gaps = 17/316 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI + H+ E EG +AVD Y WLH+G +C+ EL G T++++DY M
Sbjct: 1 MGISGLLPLLKSIQVQKHLSEFEGQTLAVDAYVWLHRGVYTCATELATGKRTNKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV LL+H+ ++P ++FDGG LP K E++R + R ENLARA ++G + + EFY
Sbjct: 61 SRVRLLKHHKIQPYIVFDGGPLPAKRGTESERKQRRDENLARANALAAQGKHTQAREFYL 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A +LI+ L+ + V Y+VAPYEADAQ+ +L + V+ +ITEDSDL+ FGC
Sbjct: 121 KCVDVTPQMAFQLIKALRAEAVPYVVAPYEADAQLAYLERTGLVDGIITEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQ-KNKD---------LSFGGFTKQMLLEMCILSGCDYLQS 230
++FK+D C+++ + KD +S G+ M ILSGCDYL S
Sbjct: 181 HVLFKLDAVA------CTLISIQRKDFGSVTDAGGVSLVGWNDAQFRAMAILSGCDYLPS 234
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
+PG+GLK A L+ + ++ D+V++ L++ +VP Y ESF A F HQRVY P E
Sbjct: 235 IPGIGLKTAATLLRRHRTVDQVVRALRFERKKNVPYNYIESFRLAEKAFLHQRVYCPLAE 294
Query: 290 DIVHLSCISDNIGNDL 305
++ L + +++ DL
Sbjct: 295 RLLCLGVLPEDVPLDL 310
>gi|431891721|gb|ELK02292.1| Exonuclease 1 [Pteropus alecto]
Length = 816
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 208/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K P+H+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPVHVRKYKGQVVAVDTYCWLHKGAVACAEQLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHRVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLRMNITVPEDYIKGFIQANNTFLYQLVFDPIRRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
+I + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEADIDPETLSYAGRYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|449278115|gb|EMC86082.1| Exonuclease 1 [Columba livia]
Length = 808
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 214/365 (58%), Gaps = 23/365 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K P H+K+ +G VAVDTY WLHKGA +C+ +L +G PT +I +CM
Sbjct: 1 MGIQGLLQFIKEAAEPTHVKKYKGQAVAVDTYCWLHKGAYACAEKLARGEPTDLYIAFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +G+KPIL+FDG LP K E E R R+ +L + + EG + + E +
Sbjct: 61 KLVDMLLSFGIKPILVFDGCTLPSKKEVEKARREKRQASLLKGKQLLQEGRVAEARECFG 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++++ +AHE+I+ + + + IVAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINVTHVMAHEVIKAARARGIDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DKFG G+E + L K L FT++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 KVFLKIDKFGNGLEIDRARLGNCKQLG-NVFTEEKFRYMCILSGCDYLSSIHGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ + D KVIK +LK + ++VP Y + F +A TF +Q V+DP +V L
Sbjct: 240 KLLKIANNPDIIKVIKKMGQYLKMN-ITVPEEYIQGFTRANNTFLYQLVFDPVKRKLVPL 298
Query: 295 SCISDNI------------GNDLDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHL 342
+ D+I G+D F IAIG++D T + ++ V Q S
Sbjct: 299 NAYGDDIDPETLIYAGRHLGDDTAF---QIAIGNIDIDTMEQIDNYNPDTAQPVQQRSCG 355
Query: 343 KNFKP 347
N +P
Sbjct: 356 WNDRP 360
>gi|284055276|ref|NP_003677.4| exonuclease 1 isoform a [Homo sapiens]
Length = 803
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|119590512|gb|EAW70106.1| exonuclease 1, isoform CRA_c [Homo sapiens]
Length = 803
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|297661539|ref|XP_002809295.1| PREDICTED: exonuclease 1 [Pongo abelii]
Length = 846
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHRVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|410354891|gb|JAA44049.1| exonuclease 1 [Pan troglodytes]
gi|410354893|gb|JAA44050.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 211/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|114573428|ref|XP_001160902.1| PREDICTED: exonuclease 1 isoform 2 [Pan troglodytes]
gi|114573430|ref|XP_001160941.1| PREDICTED: exonuclease 1 isoform 3 [Pan troglodytes]
gi|410251950|gb|JAA13942.1| exonuclease 1 [Pan troglodytes]
gi|410251952|gb|JAA13943.1| exonuclease 1 [Pan troglodytes]
gi|410297546|gb|JAA27373.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 211/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|3445182|gb|AAC32424.1| Hex1 [Homo sapiens]
gi|3822434|gb|AAC69880.1| exonuclease Ia [Homo sapiens]
Length = 803
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|74151267|dbj|BAE38768.1| unnamed protein product [Mus musculus]
Length = 837
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 228/392 (58%), Gaps = 22/392 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL ++ P+++K+ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIQEASEPVNVKKYKGQAVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L YGVKPILIFDG LP K E E R R+ NL + + EG S + + +
Sbjct: 61 KFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARDCFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLASLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP +V L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLRMNITVPEDYITGFIRANNTFLYQLVFDPIQRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK 346
D++ + D +A IA+G+ D T F+++ D S + +S ++
Sbjct: 300 AYGDDVNPETLTYAGQYVGDSVALQIALGNRDVNT---FEQIDDYSPDTMPAHSRSHSWN 356
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFS 378
++ +K P N + K PR+ N S
Sbjct: 357 EKAGQK----PPGANSIWHKNYCPRLEVNSVS 384
>gi|47207240|emb|CAF92263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1635
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 190/312 (60%), Gaps = 10/312 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL LK PI +++ +G VAVDTY WLHKGA SC+ +L KG PT +++ YCM
Sbjct: 1 MGIPGLLQFLKDAAEPISVRKYQGQAVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVWYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +GV+PIL+FDG LP K E E R R NL + + EG S + E +
Sbjct: 61 KFVDMLLTFGVRPILVFDGRNLPSKQEVEKARRERRTANLQKGRQLLREGKISEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V I+P++AH LI+ + + V IVAPYEADAQ+ +L +AVITEDSDL+ FGC
Sbjct: 121 RSVSITPAMAHRLIKAARARGVDCIVAPYEADAQLAYLTKCHLAQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMDK G G+E + L + + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDKHGNGLEIDQNNLGRCRSLG-NVFTEEKFRHMCILSGCDYLPSLHGIGLGKAC 239
Query: 241 ALISKFKSYD--KVIK------HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
L+ K D KV K +LK + V VP Y E F +A TF +Q V+DP +V
Sbjct: 240 KLLRLAKEPDILKVPKTSAAEPYLKMNLV-VPEQYVEGFVRANNTFLYQLVFDPLGNKVV 298
Query: 293 HLSCISDNIGND 304
L+ D+I D
Sbjct: 299 PLNPYPDHISVD 310
>gi|4249655|gb|AAD13754.1| exonuclease I [Homo sapiens]
Length = 846
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|119590509|gb|EAW70103.1| exonuclease 1, isoform CRA_a [Homo sapiens]
gi|119590511|gb|EAW70105.1| exonuclease 1, isoform CRA_a [Homo sapiens]
Length = 846
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|3170238|gb|AAC32259.1| Hex1 [Homo sapiens]
gi|3703096|gb|AAC63043.1| exonuclease 1a [Homo sapiens]
Length = 803
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|397508251|ref|XP_003824575.1| PREDICTED: exonuclease 1 isoform 1 [Pan paniscus]
gi|397508253|ref|XP_003824576.1| PREDICTED: exonuclease 1 isoform 2 [Pan paniscus]
Length = 846
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 211/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|3822433|gb|AAC69879.1| exonuclease Ib [Homo sapiens]
gi|23664448|gb|AAN39382.1| exonuclease 1 [Homo sapiens]
Length = 846
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|158256018|dbj|BAF83980.1| unnamed protein product [Homo sapiens]
Length = 845
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVGDSIALQIALGNKDINT---FEQIDD 340
>gi|284055278|ref|NP_006018.4| exonuclease 1 isoform b [Homo sapiens]
gi|284172361|ref|NP_569082.2| exonuclease 1 isoform b [Homo sapiens]
gi|85700954|sp|Q9UQ84.2|EXO1_HUMAN RecName: Full=Exonuclease 1; Short=hExo1; AltName: Full=Exonuclease
I; Short=hExoI
Length = 846
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|13960099|gb|AAH07491.1| Exonuclease 1 [Homo sapiens]
gi|123991816|gb|ABM83958.1| exonuclease 1 [synthetic construct]
gi|157928518|gb|ABW03555.1| exonuclease 1 [synthetic construct]
gi|307684586|dbj|BAJ20333.1| exonuclease 1 [synthetic construct]
Length = 846
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|426334339|ref|XP_004028711.1| PREDICTED: exonuclease 1 isoform 1 [Gorilla gorilla gorilla]
gi|426334341|ref|XP_004028712.1| PREDICTED: exonuclease 1 isoform 2 [Gorilla gorilla gorilla]
Length = 846
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 211/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|3513573|gb|AAC33874.1| exonuclease I [Homo sapiens]
Length = 800
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|392561830|gb|EIW55011.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 320
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 184/302 (60%), Gaps = 7/302 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK I + E G +AVD Y WLH+G+ C+ EL G PT+++++Y M
Sbjct: 1 MGISGLLPLLKDIQTNKKLSEFRGQTLAVDGYVWLHRGSYGCAPELTTGKPTTKYVEYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LLRH+G+ P L+FDGG LP K E +R + R ENLARA ++G S + E+Y
Sbjct: 61 HRVRLLRHHGITPYLVFDGGPLPAKQGTEAERKQRRDENLARANALAAQGKHSQAREYYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A++LI+ L+ + V Y+VAPYEADAQ+ +L V+ +ITEDSDL+ FGC
Sbjct: 121 KCVDVTPQMAYQLIKALRAEGVPYVVAPYEADAQLAYLERIGAVDGIITEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGV------EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
++FK+D V +F LS G++ M ILSGCDYL S+PG+
Sbjct: 181 NVLFKLDHAASTVTCIARKDFAAIASTAAGGLSLVGWSDAQFRTMAILSGCDYLPSIPGI 240
Query: 235 GLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
GLK A L+ K K+ + + L+ +P Y ++F A F HQRVYDP +VH
Sbjct: 241 GLKTAWTLLRKHKTVENTLSALRLEGKKKIPQGYLDAFRLAEKVFLHQRVYDPAQGCLVH 300
Query: 294 LS 295
L+
Sbjct: 301 LT 302
>gi|449015893|dbj|BAM79295.1| exonuclease I [Cyanidioschyzon merolae strain 10D]
Length = 557
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 201/344 (58%), Gaps = 19/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS------- 53
MGIQGLLP++K + HI + V VD YSWLHK C L + T+
Sbjct: 1 MGIQGLLPIIKPVCFRRHISDFAQKRVGVDGYSWLHKSLAGCCIALDRSNGTTAPRVERT 60
Query: 54 -RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
R ++ + RV +L+HYGV P+++FDGG +P K E E +RA R +NL A + + G
Sbjct: 61 ERFVENFLGRVRMLQHYGVSPLIVFDGGRIPAKSETEKRRATLRAKNLELATQALARGEI 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ F Q+++D++P +A+E+I+ L+++N ++VAPYEADAQ+ L+ ++ VITEDS
Sbjct: 121 ELAQSFLQRSIDVTPEMAYEVIKALRKENFDFLVAPYEADAQLAMLSRENLIDLVITEDS 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
DLI +G I+FK+D++G G + L + S F MLL MC+L+GCD+ +P
Sbjct: 181 DLIVYGARSILFKLDRYGYGDHVEQRSLGAVTNPSLLTFNPDMLLYMCVLAGCDFFAGIP 240
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PFYEESFGKAVLTFQHQRVYDPKTEDI 291
G++RAHAL+ K++ D ++ ++ +S +E F KA+ F++ RV+DP+T +
Sbjct: 241 RTGIRRAHALVQKYRKLDNILLAVRSKRLSEDYEAFERGFRKAITAFRYHRVFDPRTRQV 300
Query: 292 VHLSCISDNIGND-LD---------FLAKGIAIGDLDPFTQLPF 325
VHL+ + + +D LD +A IA DL P ++PF
Sbjct: 301 VHLNSLPSAMQSDELDGILGPAIEAGIATRIAAADLCPIQKMPF 344
>gi|5689874|emb|CAB51863.1| exonuclease 1 homologue [Mus musculus]
Length = 837
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 228/392 (58%), Gaps = 22/392 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL ++ P+++K+ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIQEASEPVNVKKYKGQAVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L YGVKPILIFDG LP K E E R R+ NL + + EG S + + +
Sbjct: 61 KFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARDCFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLASLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP +V L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLRMNITVPEDYITGFIRANNTFLYQLVFDPIQRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK 346
D++ + D +A IA+G+ D T F+++ D S + +S ++
Sbjct: 300 AYGDDVNPETLTYAGQYVGDSVALQIALGNRDVNT---FEQIDDYSPDTMPAHSRSHSWN 356
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFS 378
++ +K P N + K PR+ N S
Sbjct: 357 EKAGQK----PPGANSIWHKNYCPRLEVNSVS 384
>gi|157821351|ref|NP_001100668.1| exonuclease 1 [Rattus norvegicus]
gi|149040819|gb|EDL94776.1| exonuclease 1 (predicted) [Rattus norvegicus]
Length = 836
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 230/392 (58%), Gaps = 22/392 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K P+++K+ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPVNVKKYKGQAVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L YGVKPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSYGVKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLASLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYITGFIRANNTFLYQLVFDPIQRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK 346
D++ + D +A IA+G+ D T F+++ D S + +S ++
Sbjct: 300 AYGDDVNPETLTYAGQYVDDSVALQIALGNRDINT---FEQIDDYSPDTMPAHSRSHSWN 356
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFS 378
++ +K PV ++ K + PR+ N S
Sbjct: 357 DKACQKS---PVASSIWHKNY-CPRLEVNSVS 384
>gi|291402134|ref|XP_002717387.1| PREDICTED: exonuclease 1 [Oryctolagus cuniculus]
Length = 831
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQAVAVDTYCWLHKGAIACADKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KP+L+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPVLVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKVGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD++G G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQYGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y E F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIEGFIRANNTFLYQLVFDPIRRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D+I + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDIDPETLSYAGQYVDDAIALQIALGNKDINT---FEQIDD 340
>gi|31560511|ref|NP_036142.2| exonuclease 1 [Mus musculus]
gi|85700955|sp|Q9QZ11.2|EXO1_MOUSE RecName: Full=Exonuclease 1; Short=mExo1; AltName: Full=Exonuclease
I
gi|13879382|gb|AAH06671.1| Exonuclease 1 [Mus musculus]
gi|26324664|dbj|BAC26086.1| unnamed protein product [Mus musculus]
gi|148681255|gb|EDL13202.1| exonuclease 1 [Mus musculus]
Length = 837
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 228/392 (58%), Gaps = 22/392 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL ++ P+++K+ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIQEASEPVNVKKYKGQAVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L YGVKPILIFDG LP K E E R R+ NL + + EG S + + +
Sbjct: 61 KFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARDCFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLASLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP +V L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLRMNITVPEDYITGFIRANNTFLYQLVFDPIQRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK 346
D++ + D +A IA+G+ D T F+++ D S + +S ++
Sbjct: 300 AYGDDVNPETLTYAGQYVGDSVALQIALGNRDVNT---FEQIDDYSPDTMPAHSRSHSWN 356
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFS 378
++ +K P N + K PR+ N S
Sbjct: 357 EKAGQK----PPGTNSIWHKNYCPRLEVNSVS 384
>gi|123488984|ref|XP_001325288.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
gi|121908185|gb|EAY13065.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
Length = 402
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 201/337 (59%), Gaps = 10/337 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL L+ ++ I + +G VD + WLH+G +SC++++ K LP +I + M
Sbjct: 1 MGITGLLSLIHPVLRKCKIGDFKGKTAGVDGFVWLHRGCISCAKDIAKNLPCKSYISFFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +L G+KPI++FDG LP KI KR R +L +A E E G SS +YE+Y+
Sbjct: 61 KRAQMLIDNGIKPIIVFDGRELPAKIGTNEKRRALRNTSLQKADELERRGLSSEAYEYYK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+DISP + L + L+++++ + VAPYEADAQ+++LA +K + VITEDSDLIP+ C
Sbjct: 121 KAIDISPQVLFPLFKSLRKKHIDFFVAPYEADAQLSYLARNKICDFVITEDSDLIPYECP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
IF++D G + L L FT +M+LE C+LSGCDYL S P G++ A
Sbjct: 181 LTIFRLDSDGNCDAISYADLINVPILK--SFTPRMILEACVLSGCDYLPSAPNFGIRTAF 238
Query: 241 ALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ + S K I + V+ PP Y ESF AV F+ Q+V+DP+++ + + C
Sbjct: 239 KLVGQTGSGQKAIDAAERTGKVAFPPGYRESFDVAVSVFRQQKVFDPRSK--ITVPCFEA 296
Query: 300 N----IGNDLDFL-AKGIAIGDLDPFTQLPFQEVSDN 331
G DLD A+ +AIG L+P T PF+E+SD+
Sbjct: 297 GNCELAGEDLDTKDARNLAIGLLNPRTLEPFEELSDD 333
>gi|351707066|gb|EHB09985.1| Exonuclease 1 [Heterocephalus glaber]
Length = 838
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPILIFDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARTLGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E S L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQSRLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP +V L+
Sbjct: 240 KVLRLANNPDIEKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D+I + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDIDPETLTYAGQYIDDSIALQIALGNKDINT---FEQIDD 340
>gi|410220862|gb|JAA07650.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 211/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL ++ PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIREASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|302915703|ref|XP_003051662.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732601|gb|EEU45949.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 743
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 201/334 (60%), Gaps = 9/334 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P +K+ +G + VD Y WLH+ A C+ EL +G PT ++I+ M
Sbjct: 1 MGVTGLLPLLKSIQKPTELKKYDGQTLGVDAYGWLHRAAYCCALELGQGKPTQKYINAAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +LRH+GV P ++FDG LP K E+ RA+ R + A+E G + + + +Q
Sbjct: 61 MRVRMLRHFGVTPYMVFDGDYLPSKAATEDSRAKKRDDKKKVAMELLRAGKPAQATQEFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K +DI+P +A LIQ LK+ ++ Y+VAPYEADAQ+ +L + +I++DSDL+ FG
Sbjct: 121 KCIDITPEMASALIQQLKKLDIPYVVAPYEADAQLVYLERQGLIHGIISDDSDLLVFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++ K+D++G +E +++S G++ M ILSGCDYL LP +GLK A+
Sbjct: 181 KLLTKLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAILSGCDYLDGLPSVGLKTAY 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ K K+ ++V++ L++ + Y F +A LTF HQ V+ P + +VHL+ +
Sbjct: 241 RMLRKTKAPERVVRMLQFQGKRISENYLTQFYQAELTFLHQWVFCPNKKQLVHLTDLDGT 300
Query: 301 -IGNDLDFL--------AKGIAIGDLDPFTQLPF 325
++ F+ A+ +A GD++P T++P
Sbjct: 301 RTAEEMPFIGAFVEPEVARAVAKGDMNPITKMPI 334
>gi|342873165|gb|EGU75385.1| hypothetical protein FOXB_14090 [Fusarium oxysporum Fo5176]
Length = 743
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 195/327 (59%), Gaps = 9/327 (2%)
Query: 5 GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVN 64
GLLPLLKSI P +K+ +G + VD Y WLH+ A C+ EL +G PT +++ M+RV
Sbjct: 2 GLLPLLKSIQKPTQLKKYDGQVLGVDAYGWLHRAAYCCALELGQGKPTQKYLHAAMNRVR 61
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+LRH+GV P ++FDG LP K E R R E A+E G + + + +QK +D
Sbjct: 62 MLRHFGVTPYMVFDGDFLPSKAATEESRDTKRNEKKKAAMELLRAGKPAQATQEFQKCID 121
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
I+P +A LIQ+LK+ ++ Y+VAPYEADAQ+ +L + +I++DSDL+ FG +++
Sbjct: 122 ITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGAKKLLT 181
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D++G +E +++S G++ M I SGCDYL+ LPG+GLK A+ ++
Sbjct: 182 KLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLRGLPGIGLKTAYRMLR 241
Query: 245 KFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI-SDNIGN 303
K K+ +++++ ++ V Y F +A LTF HQ V+ P ++VHL+ + +
Sbjct: 242 KTKAPERIVRMVQMQGRKVSENYLTQFYQAELTFLHQWVFCPTKRELVHLTDLDGERTAE 301
Query: 304 DLDF--------LAKGIAIGDLDPFTQ 322
++ F +A+ IA GD++P T+
Sbjct: 302 EMPFIGAFVEPEIARSIARGDMNPITK 328
>gi|157112576|ref|XP_001657573.1| exonuclease [Aedes aegypti]
gi|108878018|gb|EAT42243.1| AAEL006209-PA [Aedes aegypti]
Length = 770
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 194/337 (57%), Gaps = 16/337 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ H++EL G CVA+D+Y WLHKGA +C+ +L +G PT HI YC+
Sbjct: 1 MGITGLIPFLEKASSRCHLRELRGQCVAIDSYCWLHKGAFACADKLARGEPTDVHIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L + +KPIL+FDG LP K E KR SR + RA E G + + + +
Sbjct: 61 KYVNMLLSHDIKPILVFDGRHLPAKAMTEAKRRESRDNSRKRAAELLRVGKTEEAKSYLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VDI+ +A +LIQ +++NV +VAPYEADAQ+ +L +AVITEDSDL+ FGCS
Sbjct: 121 RCVDITHEMALQLIQECRRRNVDCVVAPYEADAQLAYLNRKGIAQAVITEDSDLMLFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FK+D G G+ + L +T MCILSGCDYL+SLPG+GL +A
Sbjct: 181 KVLFKLDLTGTGLMIEAEKLYLAMGCKEEKYTFDKFRYMCILSGCDYLESLPGIGLAKAK 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+ + D K+ +L + V Y+E F KA TF+H V+DP L
Sbjct: 241 KFVLTTEDTDIRRALSKIPAYLNMRQLEVSEQYKEEFMKADATFKHMVVFDPVERKQARL 300
Query: 295 SCISD---------NIGNDL-DFLAKGIAIGDLDPFT 321
+ SD N GN L D A +A+G+L+PF+
Sbjct: 301 NEPSDMGTHPDLCCNAGNFLDDETALELALGNLNPFS 337
>gi|403288380|ref|XP_003935384.1| PREDICTED: exonuclease 1 [Saimiri boliviensis boliviensis]
Length = 847
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP +V L+
Sbjct: 240 KVLKLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDVNT---FEQIDD 340
>gi|396482491|ref|XP_003841474.1| similar to exonuclease [Leptosphaeria maculans JN3]
gi|312218049|emb|CBX97995.1| similar to exonuclease [Leptosphaeria maculans JN3]
Length = 725
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 217/393 (55%), Gaps = 17/393 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLKSI P ++K+ G + VD Y WLH+G +C+ +L PT++++D+ M
Sbjct: 1 MGISGLLPLLKSIQKPCNLKKFSGQTIGVDAYGWLHRGTAACAIDLALDKPTTKYVDFVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV +L H+GV P L+FDG LP K E R RKE +E G + ++ Q
Sbjct: 61 NRVRMLIHFGVTPYLVFDGDNLPSKASTEKDRKEKRKEGKRLGLELLKVGKVAQAHLELQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I+ LK N+ YIVAPYEAD+QM +L + V++EDSDL+ FG
Sbjct: 121 KSVDVTPEMARMVIEELKTNNIQYIVAPYEADSQMAYLERKGIINGVLSEDSDLLVFGVK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DK+G +E + +++SF G++ M ILSGCDYL + G+GLK AH
Sbjct: 181 CLLTKLDKYGDCIEINRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTAH 240
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ K K+ D+++K ++ + VP + F +A TF + V+ P +V+L+ + D
Sbjct: 241 RMLRKHKTVDRLVKAAQFDGKLKVPAGFLTDFEQAEKTFLYSWVFCPIANQLVNLTPLED 300
Query: 300 NI-GNDLDF--------LAKGIAIGDLDPFTQLPF----QEVSDNSHLVVGQNSHLKNFK 346
I D+ + +A +A G+L P T+LP + S L+ + +
Sbjct: 301 GIKAADMPYIGEEVPAHIAVEVAKGNLYPRTKLPLTVTNKSKSTGKPLIPSRQTSATVQT 360
Query: 347 PESERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
P+ + K P+ K+ + PN F+P
Sbjct: 361 PDGKASK---PIDSFFKPKRTPLAELDPNIFTP 390
>gi|383422759|gb|AFH34593.1| exonuclease 1 isoform b [Macaca mulatta]
Length = 846
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 209/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DIFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H + VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNIMVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|391339522|ref|XP_003744097.1| PREDICTED: exonuclease 1-like [Metaseiulus occidentalis]
Length = 516
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 209/366 (57%), Gaps = 37/366 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLK P HI + +G AVD Y WLH+GA SC+ +L G T HI +CM
Sbjct: 1 MGVSGLLPLLKGASKPAHIADFKGSVAAVDGYCWLHRGAFSCAEKLVMGEKTDLHIKFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+N L+ GV+P+++FDG LP K + KRA S+KENL +A +EG + + + +
Sbjct: 61 KMINALQANGVRPVVVFDGKSLPSKADTNKKRAESKKENLTKAKMLFAEGKTLEAKQLMK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ V+I+P +AH+LI L++ + Y+VAPYEADAQ+TFL ++ V+ +++EDSDL+ FGC
Sbjct: 121 RCVNITPELAHQLICELRKHRIDYVVAPYEADAQLTFLNLNGYVDLIVSEDSDLLLFGCE 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKD---LSFGG---FTKQMLLEMCILSGCDYLQSLPGM 234
R+++KMD G G ++++K+K L GG FT CILSGCDYL++LPG+
Sbjct: 181 RVLYKMDVNGYG-----TLVEKSKIPQCLGSGGTTHFTHDKFRWACILSGCDYLENLPGI 235
Query: 235 GLKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
GLK+ + + D K+ +LK +V+V Y + F KA TF +Q V+ P+T
Sbjct: 236 GLKKTLKFLKPTSNTDPYSLLRKMPNYLKMPSVTVTDDYIDRFVKADNTFLYQLVFCPET 295
Query: 289 EDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVG---QNSHLKNF 345
+ + L+ + IG + +P+ LV+ N H+K
Sbjct: 296 KKLRPLNPYPEGIGGE-----------------DMPYAGTYYEESLVIDIALSNIHIKTH 338
Query: 346 KPESER 351
+P ER
Sbjct: 339 RPLGER 344
>gi|355559130|gb|EHH15910.1| hypothetical protein EGK_02078 [Macaca mulatta]
Length = 943
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 209/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVKAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DIFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H + VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNIMVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|169622701|ref|XP_001804759.1| hypothetical protein SNOG_14577 [Phaeosphaeria nodorum SN15]
gi|160704833|gb|EAT78117.2| hypothetical protein SNOG_14577 [Phaeosphaeria nodorum SN15]
Length = 670
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 220/391 (56%), Gaps = 17/391 (4%)
Query: 3 IQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHR 62
I GLLPLLKSI P ++K+ G + VD Y WLH+G +C+ +L PT++++D+CM+R
Sbjct: 19 ILGLLPLLKSIQKPCNLKKFSGKTIGVDAYGWLHRGTAACAIDLALDKPTTKYVDFCMNR 78
Query: 63 VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKA 122
V +L H+G+ P +IFDG LP K E R RKE +E G ++ ++ QK+
Sbjct: 79 VRMLIHFGITPYIIFDGDNLPSKAGTEKDRRERRKEGKRLGLELLKVGKTAQAHLELQKS 138
Query: 123 VDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRI 182
VD++P +A I+ LK N+ Y+VAPYEAD++M +L ++ V++EDSDL+ FG +
Sbjct: 139 VDVTPEMARMFIEELKHHNIQYVVAPYEADSEMAYLERKGIIDGVLSEDSDLLVFGVKCL 198
Query: 183 IFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHAL 242
I K+DK+G VE + +++SF G++ M ILSGCDYL + G+GLK AH +
Sbjct: 199 ITKLDKYGDCVEINRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTAHRM 258
Query: 243 ISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNI 301
+ K K+ ++++K ++ + VP + F +A TF +Q V+ P + +VHL+ ++D I
Sbjct: 259 LRKHKTVERLVKAAQFDGKLKVPAGFMADFDQAEKTFMYQWVFCPIEKKLVHLTPLADGI 318
Query: 302 G-NDLDFL--------AKGIAIGDLDPFTQLPFQEVSD----NSHLVVGQNSHLKNFKPE 348
D+ FL A G+A GDL P T+LP S L + + P+
Sbjct: 319 DIADMPFLGEEVPAHIAMGVARGDLYPRTKLPMTITSKQKPMGKPLAPARRTSSIVQTPD 378
Query: 349 SERKKLDLPVQKNLLTKKFTTPRISPNHFSP 379
S+ K P+ ++ + PN F+P
Sbjct: 379 SKGSK---PIDSFFKARRTPLAELDPNLFTP 406
>gi|402858507|ref|XP_003893743.1| PREDICTED: exonuclease 1 isoform 1 [Papio anubis]
gi|402858509|ref|XP_003893744.1| PREDICTED: exonuclease 1 isoform 2 [Papio anubis]
Length = 846
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ +L + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQASLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DIFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|109019828|ref|XP_001093427.1| PREDICTED: exonuclease 1 isoform 2 [Macaca mulatta]
Length = 846
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 208/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DIFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H + VP Y + F +A TF +Q V+DP + L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNIMVPEDYIKGFIRANNTFLYQLVFDPIKRKLTPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|296230855|ref|XP_002760913.1| PREDICTED: exonuclease 1 [Callithrix jacchus]
Length = 852
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 209/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQAVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVPEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLKLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|344231339|gb|EGV63221.1| PIN domain-like protein [Candida tenuis ATCC 10573]
Length = 673
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 197/335 (58%), Gaps = 14/335 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GL P LK I IP+ +++ G +AVDTYSWLHK +SC++ELC PT +++ Y +
Sbjct: 1 MGVSGLHPQLKEISIPVSLEKYRGKTLAVDTYSWLHKSTISCAQELCLNQPTQKYVSYII 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++N+LRH+GV+P ++FDG LP K +R R+E A+A E +GN +++ +
Sbjct: 61 KKINMLRHFGVEPYMVFDGASLPTKAATAKERKERREEAQAKADEYMKKGNKKLAWKEFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ ++ ++ L + NV Y+VAPYEAD QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KAAAVTSQMSKSVMVELDRMNVKYVVAPYEADPQMVYLEKKGYVDGIISEDSDLLIFGCR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLS-FGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+I K++ FG+ +E S K +S FT Q L + +LSGCDY + +PG+GLK A
Sbjct: 181 TLITKLNDFGECIEISKSNFSKVTTISGLDSFTPQQLRLVAMLSGCDYTKGVPGVGLKTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPP-FYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ K+ D+V+ L+ +PP +E KA L FQ+Q+V++PK + + L+
Sbjct: 241 FNLVKKYNQIDRVLMALRAEGKKLPPEGFEVELIKADLAFQYQKVFNPKDQTLETLNEYP 300
Query: 299 DNIGNDLDFLAK------------GIAIGDLDPFT 321
+ D++ + + GI+ G L P T
Sbjct: 301 EPFDFDMELVEQCCGVTFDAEIHVGISKGKLHPNT 335
>gi|432904048|ref|XP_004077258.1| PREDICTED: exonuclease 1-like [Oryzias latipes]
Length = 752
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 187/301 (62%), Gaps = 8/301 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PI++K+ +G VAVDTY WLHKGA SC+ +L KG PT +++ YC+
Sbjct: 1 MGITGLLQFIKDAAEPINVKKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVWYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L ++ +KPIL+FDG LP K E E R R+ NL + EG S + + +
Sbjct: 61 KFVDMLLNFSIKPILVFDGRNLPSKQEVEKARRERREANLQKGRRLLREGKLSEARDCFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ V+I+P++AH LI+ + + V +VAPYEADAQ+ +L S +AVITEDSDL+ FGC
Sbjct: 121 RCVNITPAMAHNLIKAARARGVDCLVAPYEADAQLAYLTKSGLAQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I KMDK G G+E L + + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 TVILKMDKQGNGLEIDQGNLGRCRSLG-NIFTEEKFRYMCILSGCDYLPSLHGIGLGKAC 239
Query: 241 ALISKFKSYD--KVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ K D KVIK +LK + V VP Y E F +A TF HQ V+DP ++ L
Sbjct: 240 KLLRLAKDPDILKVIKKMGQYLKMNLV-VPEEYVEGFIRANNTFLHQLVFDPVQRKVIPL 298
Query: 295 S 295
+
Sbjct: 299 N 299
>gi|348577145|ref|XP_003474345.1| PREDICTED: exonuclease 1-like [Cavia porcellus]
Length = 839
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 208/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLLFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ V+I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RCVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQTRLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP +V L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D+I D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDIDPKTLTYAGQYIDDAIALQIALGNKDINT---FEQIDD 340
>gi|156355443|ref|XP_001623677.1| predicted protein [Nematostella vectensis]
gi|156210399|gb|EDO31577.1| predicted protein [Nematostella vectensis]
Length = 306
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 193/306 (63%), Gaps = 7/306 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPLLK I ++I E +G V VD Y WLHKGA C+ +L +G T+ +I+Y +
Sbjct: 1 MGIQGLLPLLKPIHRSVNISEFKGQTVGVDAYCWLHKGAYGCAMDLVEGKKTTVYINYVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+N++ + VKP+L+FDG LP K +E +R +SR EN A + GN + + E +Q
Sbjct: 61 KRINMMLFHDVKPVLVFDGAYLPSKANKEAERRKSRNENKANGLAFLRAGNRAKAQECFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDISP +A E+I++ + + V IVAPYEADAQ+ +L ++AVI+EDSDL+ +GC
Sbjct: 121 KCVDISPDMALEVIKMCRSKGVDCIVAPYEADAQLAYLMKKNIIQAVISEDSDLLVYGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FKMD G G L + +L FT + MCILSGCDYL S+ G+GL +A+
Sbjct: 181 KVMFKMDASGYGTLVSLDHLSELTNLKMHEFTLEKFRHMCILSGCDYLPSIKGIGLIKAN 240
Query: 241 ALISKFKSYDK------VIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
L+ + +K ++++L+ VP YE+SF +A TF +QRV+DP + ++V
Sbjct: 241 KLLRNSSNINKACINLTLVRNLRMDDQYRVPVDYEKSFKQADETFLYQRVFDPVSCELVP 300
Query: 294 LSCISD 299
L+ I +
Sbjct: 301 LNPIPE 306
>gi|355746262|gb|EHH50887.1| hypothetical protein EGM_01782 [Macaca fascicularis]
Length = 846
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 208/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIHGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + +A+ITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIEQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DIFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H + VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNIMVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|363731591|ref|XP_419550.3| PREDICTED: exonuclease 1 [Gallus gallus]
Length = 798
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/360 (38%), Positives = 207/360 (57%), Gaps = 15/360 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K P H+K+ G VAVD Y WLHKG+ C+ +L +G PT ++ +CM
Sbjct: 1 MGIQGLLQFIKEAAEPAHVKKYRGQAVAVDAYCWLHKGSYGCAEKLARGEPTDHYVVFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +G+KP+L+FDG LP K E E R R+ NL + + EG S + + +
Sbjct: 61 KLVDMLLSFGIKPVLVFDGCTLPSKKEVEKARREKRQANLLKGKQLFREGKLSEARDCFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+++ ++AHE+I+ + + V IVAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNVTHAMAHEVIKAARARGVDCIVAPYEADAQLAYLNKTGVVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DKFG G+E + L K L FT++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 KVFLKIDKFGNGLEIDQARLGNCKQLG-NIFTEEKFRYMCILSGCDYLSSIHGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KVIK H ++V Y + F +A TF +Q V+DP +V L+
Sbjct: 240 KLLKLANNPDIIKVIKKMGHYLKMNITVSEEYIQGFTRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIGND---------LDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK 346
+D+I + D IA+G++D T + ++ V Q SH N K
Sbjct: 300 DYADDIDPETLLYAGRYPFDSTGFQIALGNIDIDTMEQIDNYNPDTAQPVQQRSHGWNDK 359
>gi|440803854|gb|ELR24737.1| XPG Iregion domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 832
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/291 (43%), Positives = 182/291 (62%), Gaps = 27/291 (9%)
Query: 64 NLLRHYGVKPILIFDGGLLPMKIEQENKRAR-----------------SRKENLARAIEC 106
NLLR + + P+L+FDGG LP K QE KR + R+E A+A E
Sbjct: 16 NLLRSFNITPVLVFDGGALPSKKGQEEKRRKYFSPPPAILPTACEFVGKRREERAKAAEY 75
Query: 107 ESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
+GN +A+ + Y+KAVDI+P +AH+LI+ L+ + + IVAPYEADAQ+ FL+ + V +
Sbjct: 76 LQQGNRTAANDCYRKAVDITPRMAHKLIKALQAEGIECIVAPYEADAQLAFLSHTGYVHS 135
Query: 167 VITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
VI+EDSDL+PFGC R++FKMD G G E Q S L +N L F FT M +MCILSGCD
Sbjct: 136 VISEDSDLLPFGCKRVLFKMDGDGNGKEIQLSDLGQNTPLRFHNFTHDMFRQMCILSGCD 195
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYD 285
YL S+ G+G+K+AH L++K+++ D+V + LK + VPP YEE+F +A TF HQ VYD
Sbjct: 196 YLASITGLGVKKAHGLLNKYRTMDRVFRFLKNDRSFIVPPEYEEAFERAERTFLHQSVYD 255
Query: 286 PKTEDIVHLSCISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQE 327
+ ++ L+ D + + D LA+ IA G +DP++ PF+E
Sbjct: 256 HINQRVIPLTPYPDGMDSSAFPFCGALIPDDLARLIASGQVDPYSYEPFEE 306
>gi|345486309|ref|XP_001603157.2| PREDICTED: exonuclease 1-like [Nasonia vitripennis]
Length = 730
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 192/337 (56%), Gaps = 15/337 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ +I E G VA+DTY WLHKGA SC+ ++ G T ++ YCM
Sbjct: 1 MGITGLIPFLEKSSKKTNISEFAGKAVAIDTYCWLHKGAFSCADKIVMGQQTDAYVKYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L + +KPIL+FDG LP K E E KR SR+ N RA E G + +
Sbjct: 61 KFVNMLLGHNIKPILVFDGRHLPAKAETEVKRRESREANRKRAAELIKMGKITEGKNLLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D+S +A E+++ + NV IVAPYEADAQ+ +L +S V+ VITEDSDL FGC
Sbjct: 121 RSLDVSHKMALEVMKECQAHNVDCIVAPYEADAQLAYLNISGIVDVVITEDSDLTLFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I FKMD +G GV + L L F MCILSGCDYL SLPG+GL +A
Sbjct: 181 KIFFKMDMYGYGVLVEQDRLHLAMGLRLPDFHMDKFRHMCILSGCDYLASLPGIGLNKAC 240
Query: 241 ALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + + ++ L ++ V Y + F +A+ TF+HQ VY P V L
Sbjct: 241 KFIVKNTDDNIYNALLRLASSLNMKSLVVTKEYRDGFMRALATFKHQLVYCPLQRKQVRL 300
Query: 295 SCISDNI--------GNDLD-FLAKGIAIGDLDPFTQ 322
+ ++ +I G+++D LA +A+G+ DPF++
Sbjct: 301 NPLTPDITEEQLTHAGSEVDEQLAWQLALGNCDPFSK 337
>gi|329666203|pdb|3QEA|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (Wt) In
Complex With Dna (Complex Ii)
gi|329666206|pdb|3QEB|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (Wt) In
Complex With Dna And Mn2+ (Complex Iii)
Length = 352
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 210/344 (61%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|354475343|ref|XP_003499889.1| PREDICTED: exonuclease 1 [Cricetulus griseus]
Length = 841
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 198/312 (63%), Gaps = 12/312 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PI++K+ +G VAVDTY WLHKGA+SC+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPINVKKYKGQAVAVDTYCWLHKGAISCAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +GVKPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGVKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
++ + D KVIK +LK + ++VP Y F +A TF +Q V+DP +V L
Sbjct: 240 KVLKLANNPDIVKVIKKIGQYLKMN-ITVPEDYITGFIRANNTFLYQLVFDPIQRKLVPL 298
Query: 295 SCISDNIGNDLD 306
+ GND+D
Sbjct: 299 NA----YGNDVD 306
>gi|326915480|ref|XP_003204045.1| PREDICTED: exonuclease 1-like [Meleagris gallopavo]
Length = 778
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 206/360 (57%), Gaps = 15/360 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K P H+K+ G VAVD Y WLHKG+ C+ +L +G PT ++ +CM
Sbjct: 1 MGIQGLLQFIKEAAEPGHVKKYRGQAVAVDAYCWLHKGSYGCAEKLARGEPTDHYVAFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +G+KPIL+FDG LP K E E R R+ NL + + EG S + + +
Sbjct: 61 KLVDMLLSFGIKPILVFDGCTLPSKKEVEKARREKRQANLLKGKQLFREGKFSEARDCFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+++ ++AHE+I+ + + V IVAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 121 RSVNVTHAMAHEVIKAARARGVDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DKFG G+E + L K L FT++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 KVFLKIDKFGNGLEIDQARLGNCKQLG-NVFTEEKFRYMCILSGCDYLSSIHGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ + D KVIK H ++V Y + F +A TF +Q V+DP +V L+
Sbjct: 240 KLLKLANNPDIIKVIKKMGHYLKMNITVSEEYIQGFTRANNTFLYQLVFDPIKRKLVPLN 299
Query: 296 CISDNIGND---------LDFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFK 346
+D++ + D IA+G++D T + ++ Q SH N K
Sbjct: 300 DYADDVDPETLIYAGRYPFDSTGFQIALGNIDIDTMEQIDNYNPDTAQPTQQRSHGWNDK 359
>gi|380014181|ref|XP_003691118.1| PREDICTED: exonuclease 1-like [Apis florea]
Length = 646
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 193/336 (57%), Gaps = 15/336 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+ I++ + G VA+D+Y WLHK C+ +L G PT ++ YCM
Sbjct: 1 MGITGLLPFLEKASKKINVAQFSGGVVAIDSYCWLHKSVFCCAEQLSMGQPTDAYVRYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L Y + PIL+FDG LP K E E KR +R+ N +A E G + + +
Sbjct: 61 KFIYMLLSYKITPILVFDGKHLPAKAETEAKRRENRQTNRRKANELIQMGQHAEAKNLIK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D++ +A +LI+ ++ N+ IVAPYEADAQ+ +L +++ V+ VITEDSDLI FGC
Sbjct: 121 RSIDVTHEMALKLIKECQKMNIDCIVAPYEADAQLAYLNINRIVDVVITEDSDLILFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I+FKMD G G+ L D+ F+ L MCILSGCDYL SLPG+GL +A
Sbjct: 181 KILFKMDVNGNGLLIDQEQLHLAMDVHSEHFSMDKFLYMCILSGCDYLPSLPGIGLNKAK 240
Query: 241 ALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
IS+ +++ ++ +L ++ V Y +SF AV+TF+HQ V+ P V L
Sbjct: 241 KFISRNTDCDIYRALTRLGSYLNMKSLVVSNKYRDSFILAVITFKHQLVFCPLKRKQVRL 300
Query: 295 SCISDNIGNDLDFLAKG---------IAIGDLDPFT 321
+ +I N+ + A +A+G+ DPFT
Sbjct: 301 NPPMPDITNEQLYYAGTETDPDTALQLALGNFDPFT 336
>gi|344249656|gb|EGW05760.1| Exonuclease 1 [Cricetulus griseus]
Length = 878
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 198/312 (63%), Gaps = 12/312 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PI++K+ +G VAVDTY WLHKGA+SC+ +L KG PT +++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPINVKKYKGQAVAVDTYCWLHKGAISCAEKLAKGEPTDKYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +GVKPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGVKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V+I+ ++AH++I+ + V +VAPYEADAQ+ +L + V+AVITEDSDL+ FGC
Sbjct: 121 RSVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEVDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
++ + D KVIK +LK + ++VP Y F +A TF +Q V+DP +V L
Sbjct: 240 KVLKLANNPDIVKVIKKIGQYLKMN-ITVPEDYITGFIRANNTFLYQLVFDPIQRKLVPL 298
Query: 295 SCISDNIGNDLD 306
+ GND+D
Sbjct: 299 NA----YGNDVD 306
>gi|91094765|ref|XP_967471.1| PREDICTED: similar to exonuclease [Tribolium castaneum]
Length = 563
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 202/348 (58%), Gaps = 13/348 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ LLP L P HI E G VA+D+Y WLH+GA C+ +L K ++ YCM
Sbjct: 1 MGVTQLLPFLAKSTRPCHISEFRGRTVAIDSYCWLHRGARGCAMQLAKNEDVDSYVHYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ L + ++PI++FDG LP K++ E KR S+K + +EC G++S +Y+F+
Sbjct: 61 KYIKTLLSHDIRPIMVFDGRHLPAKMKTEEKRRESKKLARKQGMECLRLGHTSDAYKFFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D++P +A +LI+ ++ ++ IVAPYEADAQ+ +L + + VITEDSDL+ FGC
Sbjct: 121 QSIDVTPEMALKLIRECRKLHIDCIVAPYEADAQLAYLNIKGFADCVITEDSDLLLFGCL 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++++KMD GQG + + + + FT + MCILSGCDYL SLPG+GL++A
Sbjct: 181 KVMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRYMCILSGCDYLDSLPGIGLRKAL 240
Query: 241 ALISKFKS------YDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
IS DK+ ++LK ++ V Y+++F A TF HQ V+DP +V L
Sbjct: 241 KFISMTAETNPNIFLDKLARYLKMPSLIVTDEYKQNFLVANATFLHQIVFDPIQRKLVPL 300
Query: 295 SCISDNIG---NDLDFL----AKGIAIGDLDPFTQLPFQEVSDNSHLV 335
+ ++ ++ N +F A +A+G+L+P T P + +V
Sbjct: 301 TPVTTDVDYCQNAGEFFDPNTAFQLALGNLNPLTLQPIDNWTPTKGIV 348
>gi|270016559|gb|EFA13005.1| hypothetical protein TcasGA2_TC001970 [Tribolium castaneum]
Length = 581
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 202/348 (58%), Gaps = 13/348 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ LLP L P HI E G VA+D+Y WLH+GA C+ +L K ++ YCM
Sbjct: 1 MGVTQLLPFLAKSTRPCHISEFRGRTVAIDSYCWLHRGARGCAMQLAKNEDVDSYVHYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ L + ++PI++FDG LP K++ E KR S+K + +EC G++S +Y+F+
Sbjct: 61 KYIKTLLSHDIRPIMVFDGRHLPAKMKTEEKRRESKKLARKQGMECLRLGHTSDAYKFFA 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D++P +A +LI+ ++ ++ IVAPYEADAQ+ +L + + VITEDSDL+ FGC
Sbjct: 121 QSIDVTPEMALKLIRECRKLHIDCIVAPYEADAQLAYLNIKGFADCVITEDSDLLLFGCL 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++++KMD GQG + + + + FT + MCILSGCDYL SLPG+GL++A
Sbjct: 181 KVMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRYMCILSGCDYLDSLPGIGLRKAL 240
Query: 241 ALISKFKS------YDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
IS DK+ ++LK ++ V Y+++F A TF HQ V+DP +V L
Sbjct: 241 KFISMTAETNPNIFLDKLARYLKMPSLIVTDEYKQNFLVANATFLHQIVFDPIQRKLVPL 300
Query: 295 SCISDNIG---NDLDFL----AKGIAIGDLDPFTQLPFQEVSDNSHLV 335
+ ++ ++ N +F A +A+G+L+P T P + +V
Sbjct: 301 TPVTTDVDYCQNAGEFFDPNTAFQLALGNLNPLTLQPIDNWTPTKGIV 348
>gi|312378187|gb|EFR24829.1| hypothetical protein AND_10346 [Anopheles darlingi]
Length = 835
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 186/338 (55%), Gaps = 18/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+ H+K+L G CVA+D+Y WLH+GA C+ L +G T HI YC+
Sbjct: 1 MGITGLLPFLEKASSACHLKDLRGKCVAIDSYCWLHRGAFGCAERLARGEQTDAHIRYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V LL Y +KPIL+FDG LP K E KR SR+ R E G + F +
Sbjct: 61 KYVQLLLSYNIKPILVFDGRHLPAKAGTEAKRRESRENARKRGAELLRLGRIDEARSFLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VDI+ +A +LIQ +++NV +VAPYEADAQ+ FL + + VITEDSDL+ FGCS
Sbjct: 121 RCVDITHEMALQLIQECRKRNVDCVVAPYEADAQLAFLNRADIAQYVITEDSDLVLFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RI+FK+D G G + + L + +MCILSGCDYL+SLPG+GL +A
Sbjct: 181 RILFKLDLAGNGRLVEATKLHLAMGCREERYQFVKFRQMCILSGCDYLESLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + D K+ +L + V Y+ F KA TF+H VYDP L
Sbjct: 241 RFILKTEDPDMKRALAKIPAYLNMRQLVVSEEYKIEFLKAEATFKHMVVYDPIERRQKRL 300
Query: 295 S-----------CISDNIGNDLDFLAKGIAIGDLDPFT 321
+ C + + D D A +A+G+LDPF+
Sbjct: 301 TDPLDEGTPEEYCCNAGVFLDED-TAFNLALGNLDPFS 337
>gi|329666197|pdb|3QE9|Y Chain Y, Crystal Structure Of Human Exonuclease 1 Exo1 (D173a) In
Complex With Dna (Complex I)
gi|329666200|pdb|3QE9|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (D173a) In
Complex With Dna (Complex I)
Length = 352
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 209/344 (60%), Gaps = 18/344 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R++ +CM
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDS L+ FGC
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSALLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 239
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 240 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 299
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 300 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 340
>gi|357603281|gb|EHJ63691.1| exonuclease [Danaus plexippus]
Length = 654
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 189/336 (56%), Gaps = 15/336 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L ++ E G VA+DTY WLHKGA +C+ +L +G T HI YC+
Sbjct: 1 MGITGLIPFLDKASRRANVSEFSGSSVAIDTYCWLHKGAFACADKLVRGEETDIHIKYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +L+ +KPIL+FDG LP K E KR +R + RA E S G + F +
Sbjct: 61 KYVTMLQSRNIKPILVFDGRHLPAKAMTELKRRETRDISKKRAAELLSLGKIDEARSFMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++VDI+ ++A LI+ +++N+ IVAPYEADAQ+ +L + + VITEDSDLI FGC+
Sbjct: 121 RSVDITHAMALALIKECRKRNIDCIVAPYEADAQLAYLNIKNYAQLVITEDSDLILFGCT 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FKMD G G + L +T MCILSGCDYL SLPG+GL +A
Sbjct: 181 KVLFKMDLEGNGTLVETIKLPLVMKCPIEHYTFDKFRRMCILSGCDYLNSLPGIGLAKAR 240
Query: 241 ALI-----SKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
+ + F + K + ++ V Y E+F KA TF+HQ VYDP + L+
Sbjct: 241 QFVNASQDTNFANALKKLPSFFNRSLQVSDDYRENFLKAEATFKHQYVYDPSQRCMTRLT 300
Query: 296 CISD---------NIGNDLD-FLAKGIAIGDLDPFT 321
+ D N G LD +A +A+G+LDPFT
Sbjct: 301 PVYDEEIEAALCSNAGELLDPQIAFQLALGNLDPFT 336
>gi|327262075|ref|XP_003215851.1| PREDICTED: exonuclease 1-like [Anolis carolinensis]
Length = 810
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 201/333 (60%), Gaps = 17/333 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K P H+K+ +G VAVDTY WLHKGA +C+ +L KG PT++++ YCM
Sbjct: 1 MGIPGLLQFIKEAAEPSHVKKYKGQVVAVDTYCWLHKGAYACAEKLAKGEPTNQYVIYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +GVKPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 61 KLVDMLLSFGVKPILVFDGCTLPSKKEVEKSRREKRQTNLLKGKQLLREGKLSEAKECFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++A E+I+ + Q + IVAPYEADAQ+ +L + V+++ITEDSDL+ FGC
Sbjct: 121 RSINITHAMACEVIKAARAQGIDCIVAPYEADAQLAYLNKTGIVQSIITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K+DK G G+E + L K L FT++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 KVFLKIDKLGNGLEIDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLPSIHGIGLGKAC 239
Query: 241 ALISKFKSYD--KVI----KHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ + D KVI ++LK + + VP Y + F +A TF +Q V+DP +V L
Sbjct: 240 KLLKIANNPDIIKVIGKMGQYLKMNIL-VPDDYLQGFIRANNTFLYQLVFDPVRRKLVPL 298
Query: 295 SCISDNIGNDL---------DFLAKGIAIGDLD 318
+ ++I + D A IA+G+ D
Sbjct: 299 NAYENDIDPETLHYAGRHFGDSTAFQIALGNKD 331
>gi|332021099|gb|EGI61486.1| Exonuclease 1 [Acromyrmex echinatior]
Length = 749
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 191/336 (56%), Gaps = 15/336 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+ +IKE G VA+D+Y WLHKGA SC+ +L G T ++ YCM
Sbjct: 1 MGITGLLPFLEKSSRKTNIKEFSGGTVAIDSYCWLHKGAFSCAEKLMMGEMTDAYVVYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+N+L Y +KPIL+FDG L K + E KR ++R+ N +AIE G + +
Sbjct: 61 KYINMLLKYKIKPILVFDGQRLLAKEQTEIKRRKARELNRRKAIELIQMGKVTEGTNLLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AVDI+ +IA ELI+ + +N+ I+APYEADAQ+ +L +S + VITEDSDL FGC
Sbjct: 121 RAVDITHTIALELIKQCQNENIDCIIAPYEADAQLAYLNISGIADVVITEDSDLTLFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I FKMD G G+ L ++ F +CILSGCDYL SLPG+GL +A
Sbjct: 181 KIFFKMDLVGNGILIAQDQLHLAMNVRSEQFEMDKFRHICILSGCDYLPSLPGIGLGKAR 240
Query: 241 ALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I+K ++ ++ L ++ VP Y ++F A +TF+HQ V+ P V L
Sbjct: 241 KFITKSTDQNIHRALTRLGSVLNMKSLVVPQEYRDAFILAEITFKHQLVFCPLQRKQVRL 300
Query: 295 SCISDNI--------GNDLD-FLAKGIAIGDLDPFT 321
+ NI G +LD LA +A+G+ DP T
Sbjct: 301 NPPPANITEDQLQYAGKELDEDLALQLALGNCDPAT 336
>gi|323450159|gb|EGB06042.1| hypothetical protein AURANDRAFT_29882, partial [Aureococcus
anophagefferens]
Length = 306
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 180/302 (59%), Gaps = 7/302 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP+ + +H+ VAVD Y+WLH+G +C+ EL G + +HI++CM
Sbjct: 1 MGVSGLLPMFRGSTQTVHVSRYAHEVVAVDGYAWLHRGVHACASELGAGGASDKHIEFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV LL HY VKP+L+FDGG LP K QE R R+ A A + E + + ++Y
Sbjct: 61 GRVALLLHYKVKPLLVFDGGALPAKAAQEASRRGKREHAKAMASQKAREDSHEEARKWYA 120
Query: 121 KAVDISPSIAHELIQVLKQQ---NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPF 177
K VD++P +A +L+ + V ++VAPYEADAQ+ LA S + A+++EDSD + +
Sbjct: 121 KCVDVTPVMAKQLVDACAARWGDRVDFLVAPYEADAQLAQLARSGEAAAIVSEDSDNLAY 180
Query: 178 GCSRIIFKMDKFGQGVEFQCSMLQKN----KDLSFGGFTKQMLLEMCILSGCDYLQSLPG 233
G R++FK+D G + + L L G+T+ M + MC L+GCDY++++ G
Sbjct: 181 GVPRVLFKLDADGSAQQVVLADLFAAGPGVNALDVRGWTQDMFVTMCALAGCDYVEAVKG 240
Query: 234 MGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
+G+K AH L++++K KV++ L+Y + P YE+ +A LTF HQ VYD + VH
Sbjct: 241 VGIKNAHRLVARYKDRKKVLRALRYECAACPDDYEQRVDRAALTFGHQMVYDRRRRAAVH 300
Query: 294 LS 295
L+
Sbjct: 301 LA 302
>gi|410929919|ref|XP_003978346.1| PREDICTED: exonuclease 1-like [Takifugu rubripes]
Length = 740
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 197/333 (59%), Gaps = 17/333 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL +K PI I++ +G VAVDTY WLHKGA SC+ +L KG PT +++ YCM
Sbjct: 1 MGIPGLLQFIKDAAEPISIRKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVWYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +L + +KPIL+FDG LP K E E R R NL + + EG S + + +
Sbjct: 61 RFVEMLLTFRIKPILVFDGRNLPSKQEVERARRERRTSNLQKGRQLLREGKVSEARDCFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V I+P++AH L++ + + V IVAPYEADAQ+ +L +AVITEDSDL+ FGC
Sbjct: 121 RSVSITPAMAHNLMKAARARGVDCIVAPYEADAQLAYLTKWHLAQAVITEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMDK G G+E + L + + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 181 KVILKMDKHGNGLEIDQNNLGRCRALG-NIFTEEKFRHMCILSGCDYLPSLHGIGLGKAC 239
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
L+ K D K+ ++LK + + +P Y E F +A TF +Q V+DP + +V L
Sbjct: 240 KLLRLAKEPDITKVIRKMAQYLKMNLL-IPEQYIEGFTRANNTFLYQLVFDPVSRKVVPL 298
Query: 295 SCISDNIGNDLDFLAKG---------IAIGDLD 318
+ D+I D A +A+G+LD
Sbjct: 299 NPYPDHISGDTLTYAGSHFGEEIELQLAMGNLD 331
>gi|170100216|ref|XP_001881326.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644005|gb|EDR08256.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 340
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 184/314 (58%), Gaps = 10/314 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL LKSI + H+ E G +A+D Y WLHKG +C EL G T +++DY M
Sbjct: 1 MGISGLLTALKSIQVTRHLSEFSGQTLAIDAYVWLHKGVFTCPTELATGKNTHKYVDYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LL+++ ++P ++FDGG LP K E+ R R R+E+L+R +G + E Y
Sbjct: 61 HRVRLLQYHNIQPYIVFDGGPLPAKKNTESSRKRRREEHLSRGNTLALQGKHREARECYV 120
Query: 121 KAVDISPSIAHEL-IQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
K++D++P +A Q L+ +N+ Y+VAPYEADAQ+ +L V VITEDSDL+ FGC
Sbjct: 121 KSMDVTPQMASFFRTQALRAENIPYVVAPYEADAQLAYLERMGIVNGVITEDSDLLVFGC 180
Query: 180 SRIIFKMDKFGQGV------EFQCSMLQKN--KDLSFGGFTKQMLLEMCILSGCDYLQSL 231
++ K+D V +F +++ +S G++ M ILSGCDYL S+
Sbjct: 181 QNVLLKLDVVASTVISISRKDFGTVTARRSDPNSISLVGWSDVQFRAMAILSGCDYLGSI 240
Query: 232 PGMGLKRAHALISKFKSYDKVIKH-LKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
PG+GLK A L+ K+KS ++V++ L SVPP Y E F A F HQRVY P E
Sbjct: 241 PGVGLKTACFLLRKWKSVEQVVRVILLEGKKSVPPGYLERFRLAEKCFLHQRVYCPLEEK 300
Query: 291 IVHLSCISDNIGND 304
+V+L I + D
Sbjct: 301 LVYLRPIDGDWDED 314
>gi|347972009|ref|XP_313789.5| AGAP004491-PA [Anopheles gambiae str. PEST]
gi|333469129|gb|EAA09057.6| AGAP004491-PA [Anopheles gambiae str. PEST]
Length = 861
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 184/337 (54%), Gaps = 16/337 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+ H++EL G CVA+DTY WLH+GA C+ L +G T HI YC+
Sbjct: 1 MGITGLLPFLEKASSACHLRELRGKCVAIDTYCWLHRGAFGCAERLARGDSTDMHIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V LL + +KPIL+FDG LP K E KR R+ R E G + F +
Sbjct: 61 KYVQLLLSHNIKPILVFDGQHLPAKAATEAKRREIRETARKRGAELLRLGRIDEARSFLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VDI+ +A +L+Q +++ V IVAPYEADAQ+ +L + + VITEDSDL+ FGC+
Sbjct: 121 RCVDITHEMALQLMQECRKRGVDCIVAPYEADAQLAYLNRTDIAQYVITEDSDLVLFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
RI+FK+D G G + S L + MCILSGCDYL SLPG+GL +A
Sbjct: 181 RILFKLDLTGHGRLVEASKLHLAMGCREDRYKFAKFRYMCILSGCDYLDSLPGIGLGKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+ K + D K+ +L +SV Y++ F KA TF+H VYDP L
Sbjct: 241 KFMLKTEDPDIRRALAKIPAYLNMRQLSVTEEYKDEFLKADATFKHMVVYDPVQRRQTRL 300
Query: 295 SCISD---------NIGNDLD-FLAKGIAIGDLDPFT 321
D N G LD +A +A+G+LDPF+
Sbjct: 301 VDPDDEGTPEQYCCNAGKFLDEKVAFQLAVGNLDPFS 337
>gi|198430437|ref|XP_002130214.1| PREDICTED: similar to exonuclease 1 [Ciona intestinalis]
Length = 745
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 204/337 (60%), Gaps = 16/337 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K IHI+E VAVDTY WLH+G+ +C+ +L K T +++ YCM
Sbjct: 1 MGIQGLLKFIKDATEDIHIREYANQTVAVDTYCWLHRGSFACAEKLAKKEKTDQYVKYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++L+ + VKPIL+FDG LP K E +R + RKENL + + EG S + + +
Sbjct: 61 KYLDMLQVHKVKPILVFDGCRLPSKELVEQQRHKRRKENLEKGKQYLREGKLSQARDCFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K + ++P++A +++Q + + + IVAPYEADAQ+ FL+ +A+ITEDSDL+ FGC+
Sbjct: 121 KCISVTPAMALDVMQAARSRGIDCIVAPYEADAQLAFLSKKGIAQAIITEDSDLLCFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA- 239
++FKMD G+G + + L + K+L GFT ++ MCILSGCDYL S+ G+GL +A
Sbjct: 181 NVVFKMDVLGRGQQVKMEHLGRVKNLV--GFTPELFRHMCILSGCDYLPSIKGVGLVKAC 238
Query: 240 HAL-ISKFKSYDKVIKHLKYSTVSVPPF---YEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
AL +SK K +V + L SV P Y F +A TF +Q V+DP +++ L+
Sbjct: 239 KALKLSKSKDAYQVARKLNQYIKSVGPIDPSYGADFERADKTFLYQLVFDPSKRELIPLN 298
Query: 296 CISDNIG-NDLDFL--------AKGIAIGDLDPFTQL 323
+ +DL+F A +AIG++D T+L
Sbjct: 299 EYPPGVTVDDLNFAGAMFNKAEAFQLAIGNVDVNTKL 335
>gi|328720558|ref|XP_001942954.2| PREDICTED: exonuclease 1-like [Acyrthosiphon pisum]
Length = 675
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 196/332 (59%), Gaps = 14/332 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGL+PLL+ +++ E GC VA+D Y WLH+G +C+ +L +G + ++ YCM
Sbjct: 1 MGIQGLIPLLEKSWRSVNVSEFSGCTVAIDAYCWLHRGVYTCAEKLARGEDSQAYVYYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V++L +KPIL+FDG LP K + E+KR + R+EN +A E + +
Sbjct: 61 RFVSMLLDQNIKPILVFDGQHLPAKADTESKRRKLREENRKKAAELMRLDKGKEASSLLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D++ +A LI+ ++ NV IVAPYEAD+Q+ +L +S VITEDSDL+ FGC
Sbjct: 121 RSIDVTHKMALNLIKRCREINVDCIVAPYEADSQLAYLNLSGIAHIVITEDSDLLLFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R++FK+D+ G G+ + + + ++ F+ MCILSGCDYL S+PG+GL +A
Sbjct: 181 RVLFKLDQNGAGILIEQEKIHLSMNIKPEQFSFDKFRYMCILSGCDYLPSVPGVGLVKAR 240
Query: 241 ALISKFKS---YDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
I++ Y +++ + + +PP Y + F A FQ+Q V+DP + I+ L+ I
Sbjct: 241 QFITRTSEPDIYKALLRLGSFVNIKIPPEYRDQFMDADRMFQYQPVFDPLSRRIIPLNDI 300
Query: 298 SDNIGNDLDFL--------AKGIAIGDLDPFT 321
SD ++L L A +A+G++DP +
Sbjct: 301 SD---SNLPVLVSKLTCDQAYQLALGNIDPIS 329
>gi|296421974|ref|XP_002840538.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636756|emb|CAZ84729.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 201/342 (58%), Gaps = 22/342 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL L SI HIKE G V +D YSWLHKG + C+ EL +G T +++Y M
Sbjct: 1 MGISGLLVRLGSIQRKNHIKEWNGTTVGIDAYSWLHKGVIGCAIELAQGKHTRGYVEYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV++LRH+GV P ++FDG LP K E +R R R+E A+ +E + E Q
Sbjct: 61 SRVHMLRHFGVTPYMVFDGDYLPSKSWTEAERERRRQERRAKGLELLKLRKMREAQEQLQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K++D++P +A LI ++ V IVAPYEADAQ+ +L + + +I+EDSDL+ FGC
Sbjct: 121 KSIDVTPLMARHLIDECRRIGVECIVAPYEADAQLYYLEKTGIIHGIISEDSDLLAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKN-------KDLSFGGFTKQMLLEMCILSGCDYLQSLPG 233
+I KMDKFG C + ++ S G+T MCILSGCDYL ++P
Sbjct: 181 NLITKMDKFG-----GCYTIDRDDFTAIRGSGFSLSGWTDTEFRYMCILSGCDYLPNIPR 235
Query: 234 MGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
+GL A+ L+ + K+ +++I+ +++ +T +VP Y + F +A LTF HQ V+ PK E +V
Sbjct: 236 LGLLGAYKLVKRHKTPERIIQSVRFDATKTVPVDYLDGFRRANLTFLHQWVFCPKAEKMV 295
Query: 293 HLS--------CISDNIGNDLDF-LAKGIAIGDLDPFTQLPF 325
++ D G +LD A+GIA GDLDP T+ PF
Sbjct: 296 MVTEPDAVVDKQYLDGCGRELDAETARGIACGDLDPVTKKPF 337
>gi|384483460|gb|EIE75640.1| hypothetical protein RO3G_00344 [Rhizopus delemar RA 99-880]
Length = 515
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 181/295 (61%), Gaps = 4/295 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLL I PIHI+E G VA+D + WLHKG+ SC+ EL PT++++ Y M
Sbjct: 1 MGITGLLPLLAPITKPIHIQEYAGKIVAIDGHCWLHKGSFSCALELALNQPTTKYVSYFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +N+LR Y V P+++FDG LPMK E +KRA+ RKE+ + + + + Q
Sbjct: 61 NLINMLRFYKVIPLVVFDGQSLPMKQETNSKRAQKRKESFNIGFKLVKDNKIKEALPYLQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++ I+ + ++++ L + V +++APYEADAQ+ +L + +A ITEDSDL+ FGCS
Sbjct: 121 QSISITQDMIQQVVKKLDEIGVQHVIAPYEADAQLAYLLKNNYAQAAITEDSDLLAFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+IFK++++G + + K D+ F+ L +C+LSGCDYL SL G+GLK A
Sbjct: 181 TVIFKLNRYGDCMRIHFEDISKVIDIK--PFSVTTLRHICMLSGCDYLPSLKGIGLKTAE 238
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
LI K + +KV+K L++ Y++ F +A F HQ VYD KT V L+
Sbjct: 239 TLIKKHLTIEKVMKALRFRQNIAR--YQQDFERAETAFLHQFVYDVKTRQFVRLN 291
>gi|167536660|ref|XP_001750001.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771511|gb|EDQ85176.1| predicted protein [Monosiga brevicollis MX1]
Length = 530
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 198/345 (57%), Gaps = 13/345 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPL++ M +H++ EG VA+D +SWLH+GA +C+ +L T H+ +CM
Sbjct: 1 MGIQGLLPLVQPAMRKVHMRAFEGKRVAIDAFSWLHRGAYACAMDLALRKQTDMHVRFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL+ + PI++FDG LP K + +R R E R + EG + + +
Sbjct: 61 KRIALLKQCNITPIMVFDGQPLPSKRNENQRRTAQRLEGRKRGLALLREGKRAEARRQFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++ I +IA +LI+ ++ + +VAPYEADAQM FLA S V+AV+TEDSDLI +
Sbjct: 121 QSIHIDGAIAFQLIEACRKAAIEVLVAPYEADAQMAFLAHSGYVDAVLTEDSDLIVYQVP 180
Query: 181 RIIFKMDKFGQGVEFQCSML----QKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
II+K+++ G+ + ++L Q + +++F +T M MCIL+GCDYL S MG+
Sbjct: 181 CIIYKLEESGEAQLMEVNLLYRGAQLDSNINFASWTPTMFRWMCILAGCDYLPSAARMGI 240
Query: 237 KRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
K A+ ++ +S ++ K + + Y F KA TF HQ V+DP+T+ + +L+
Sbjct: 241 KSAYRIVRTSRSIAQICKTMSAQGFAGDAEYMRGFVKAENTFLHQVVFDPQTQQLRYLTA 300
Query: 297 ISDNI-GNDLDF--------LAKGIAIGDLDPFTQLPFQEVSDNS 332
+ G+ ++ LA+ IA G LDP T P Q ++ S
Sbjct: 301 WPEGSDGSQHNYVGELFENELARAIACGALDPMTHRPHQSHAERS 345
>gi|307198944|gb|EFN79696.1| Exonuclease 1 [Harpegnathos saltator]
Length = 1355
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 192/336 (57%), Gaps = 15/336 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+ ++ E G VA+DTY WLHKG SC+ ++ G T+ ++ YCM
Sbjct: 1 MGITGLLPFLEKASRRTNVSEFSGGVVAIDTYCWLHKGVFSCAEKVMMGQTTNAYVLYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+N+L + +KPIL+FDG LP K + E KR +R+ N +A+E G + +
Sbjct: 61 KFINMLLRHDIKPILVFDGRQLPAKKKTEVKRREARQMNRRKALELIKMGQDAEGKNLLK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+DI+ +A ELI+ + +N+ IVAPYEADAQ+ +L +S + VITEDSDL FGC
Sbjct: 121 RAIDITHEMALELIKYCQSENIDCIVAPYEADAQLAYLNISGIADVVITEDSDLTLFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I+FKMD G GV + +L D+ F +CILSGCDYL SLPG+GL +A
Sbjct: 181 KILFKMDFNGHGVLIEQDLLHLAMDMRSEQFNMDKFRYICILSGCDYLPSLPGIGLGKAR 240
Query: 241 ALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I++ K+ +V L ++ V Y ++F A +TF+HQ V+ P V L
Sbjct: 241 KFITRNTDPNIHKALTRVGSVLNMKSLEVTQEYRDAFILADITFRHQLVFCPLQRKQVRL 300
Query: 295 SCISDNI--------GNDLDF-LAKGIAIGDLDPFT 321
+ + +I G +LD LA +A+G+ DP T
Sbjct: 301 NPPTADITEDQLCYAGQELDADLALQLALGNCDPCT 336
>gi|307171354|gb|EFN63252.1| Exonuclease 1 [Camponotus floridanus]
Length = 762
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 191/336 (56%), Gaps = 15/336 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+ +IKE G VA+D+Y WLHKG SC+ +L G T+ ++ YCM
Sbjct: 1 MGITGLLPFLEKSSKRTNIKEFSGSVVAIDSYCWLHKGVFSCAEKLMMGQTTNAYVLYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++L Y +KPIL+FDG LP K E KR ++R+ N +AIE G + +
Sbjct: 61 KYIDMLLKYKIKPILVFDGRRLPAKEHTEIKRRQTRQINRQKAIELIQMGQVAEGRNLLK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+DI+ IA ELI+ + +N+ I+APYEADAQ+ +L +S + VITEDSDL FGC
Sbjct: 121 RAIDITHEIALELIKHCQNENIDCIIAPYEADAQLAYLNISNIADVVITEDSDLTLFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+I FKMD G GV + L ++ F +CILSGCDYL SLPG+GL +A
Sbjct: 181 KIFFKMDFNGNGVLIEQDRLHLAMNMRPEEFDMNKFRYICILSGCDYLPSLPGIGLAKAR 240
Query: 241 ALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
IS+ ++ ++ L ++ V Y ++F A +TF+HQ V+ P V L
Sbjct: 241 KFISRNTDHNIHRALTRIGSVLNMKSLVVTQEYRDAFILADITFKHQLVFCPLQRKQVRL 300
Query: 295 SCISDNI--------GNDLD-FLAKGIAIGDLDPFT 321
S + +I G +LD LA +A+G+ DP T
Sbjct: 301 SPPTTDITEDQLQYAGKELDPDLAFQLALGNCDPST 336
>gi|340709250|ref|XP_003393224.1| PREDICTED: exonuclease 1-like [Bombus terrestris]
Length = 725
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 190/336 (56%), Gaps = 15/336 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP L+ I++++ G VA+D+Y WLHKG SC+ +L G PT ++ YCM
Sbjct: 1 MGITGLLPFLEKASKRINVRQFSGGTVAIDSYCWLHKGVFSCADKLSMGHPTDAYVHYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++L + ++PIL+FDG LP K + E KR +R+ N + IE G + +
Sbjct: 61 KFIHMLLSHKIRPILVFDGRHLPAKAQTEVKRRENRQTNRRKGIELMQMGQHAEGRNLLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++D++ +A ELI+ + N+ IVAPYEADAQ+ +L ++ + VITEDSDLI FGC
Sbjct: 121 RSIDVTHEMALELIKQCHEMNIDCIVAPYEADAQLAYLNINGIADVVITEDSDLILFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FKMD G G+ L ++ F MCILSGCDYL SLPG+GL +A
Sbjct: 181 KVLFKMDLTGNGLLVDQEQLHLAMEIPSKHFNMDDFCYMCILSGCDYLPSLPGIGLNKAR 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K D ++ +L ++ V Y +SF AV+TF+HQ V+ P V L
Sbjct: 241 KFIKLNKDCDIHKALTRLGSYLNMKSLVVTKEYRDSFILAVITFKHQLVFCPLKRKQVRL 300
Query: 295 SCISDNIGNDLDF---------LAKGIAIGDLDPFT 321
+ + ++ + + +A +A+G+ DPFT
Sbjct: 301 TPPTSDVTEEQLYYAGLQIDPDIALQLALGNCDPFT 336
>gi|344278553|ref|XP_003411058.1| PREDICTED: exonuclease 1 [Loxodonta africana]
Length = 927
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 203/348 (58%), Gaps = 26/348 (7%)
Query: 9 LLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRH 68
+K PIH+++ +G VAVDTY WLHKGA++C+ +L +G PT +++ +CM VN+L
Sbjct: 85 FIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLARGEPTDKYVGFCMKFVNMLLS 144
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
+G+KPIL+FDG LP K E E R R+ NL + + EG S + E + ++++I+ +
Sbjct: 145 HGIKPILVFDGCTLPSKKEVEESRRERRQANLLKGKQLLREGKVSEARECFTRSINITHA 204
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC ++I KMD+
Sbjct: 205 MAHKVIKAARSQGVDCLVAPYEADAQLAYLNRAGIVQAIITEDSDLLAFGCKKVILKMDQ 264
Query: 189 FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKS 248
G G+E + L + L FT++ MCILSGCDYL SL G+GL +A L+ +
Sbjct: 265 LGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKLLRLANN 323
Query: 249 YD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGN 303
D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+ D+I
Sbjct: 324 PDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLNAYEDDIDP 383
Query: 304 DL---------DFLAKGIAIG-----------DLDPFTQLPFQEVSDN 331
+ D +A IA+G D +P T P Q S N
Sbjct: 384 ETLSYAGWYVDDSVALQIALGNKDINTLEQIDDYNPDTATPAQSRSHN 431
>gi|448082392|ref|XP_004195129.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359376551|emb|CCE87133.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 182/296 (61%), Gaps = 1/296 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P + + +G +AVDTY WLH+G +SC+ ELC+ +PT ++I M
Sbjct: 1 MGVTGLLQHLKEIQEPTDLSKFKGKSLAVDTYGWLHRGLMSCAVELCEDIPTRKYITSVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V++LRH+GV+P L+FDG LP K E +R R+E +A + S GN +A+++ Y
Sbjct: 61 KKVDMLRHFGVEPYLVFDGAHLPTKGETVKERMLKREEAKMKAEKFTSVGNRTAAWKEYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L + V Y+VAPYEAD QM +L V+ +++EDSDL+ FGC+
Sbjct: 121 KAAAVTSEMAKSIMVELDARGVKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++ K++ FG+ +E K K + FT++ L + +LSGCDY + PG+GLK A
Sbjct: 181 TLVTKLNDFGECIEICRKNFDKVKKVPGLASFTEEQLRIVAMLSGCDYTKGFPGIGLKTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ K S++KV+ L+ VP E+ KA L FQ Q+V++P ++ + L+
Sbjct: 241 FNLVRKHGSFEKVLHALRNDGKKVPDNIEDEVFKANLAFQFQKVFNPVSQTLETLN 296
>gi|448086968|ref|XP_004196223.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359377645|emb|CCE86028.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 182/296 (61%), Gaps = 1/296 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P + + +G +AVDTY WLH+G +SC+ ELC+ +PT ++I +
Sbjct: 1 MGVTGLLQHLKEIQEPTDLSKFKGKSLAVDTYGWLHRGLMSCAVELCEDIPTRKYITSVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V++LRH+GV+P L+FDG LP K E +R R+E +A + S GN +A+++ Y
Sbjct: 61 KKVDMLRHFGVEPYLVFDGAHLPTKGETVKERMLKREEAKMKAEKFSSMGNRTAAWKEYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L + V Y+VAPYEAD QM +L V+ +++EDSDL+ FGC+
Sbjct: 121 KAAAVTSEMAKSIMVELDARGVKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++ K++ FG+ +E K K + FTK+ L + +LSGCDY + PG+GLK A
Sbjct: 181 TLVTKLNDFGECIEICRKNFDKVKKVPGLASFTKEQLRIVAMLSGCDYTKGFPGIGLKTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ K S++KV+ L+ VP E+ KA L FQ Q+V++P ++ + L+
Sbjct: 241 FNLVRKHGSFEKVLLALRNDGKKVPDNIEDEVFKANLAFQFQKVFNPVSQTLETLN 296
>gi|303272353|ref|XP_003055538.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463512|gb|EEH60790.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 312
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 179/300 (59%), Gaps = 16/300 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKG-------LPTS 53
MGI+GL +L+ + P+ + + G AVD YSWLHKGA SC+ EL G +
Sbjct: 1 MGIKGLPDVLRPWLTPVSVSKYAGKRAAVDAYSWLHKGAYSCALELGTGDRWWARAKRDA 60
Query: 54 RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
++ YC+HR +LRH+G+ P+++FDG LP K +E +R R E L + E + +
Sbjct: 61 PYVRYCVHRAQMLRHFGITPVIVFDGDRLPAKGGEEKERRDRRAEALRKGHERLAARDRE 120
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYE-----ADAQMTFLAVSKQVEAVI 168
+ F+ + VD+SPS+AHELI LK++ +IVAPYE A V+ V
Sbjct: 121 GAAFFFAQGVDVSPSMAHELIAALKREGFEFIVAPYEADAQIAALAAMGGGEGGGVDVVF 180
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TEDSDL+ +GC ++FK+DKFG E + + L+F G++ + L +C+LSGCD+L
Sbjct: 181 TEDSDLVAYGCPSVLFKLDKFGDAQELR---IADGAPLNFTGWSMDLFLGLCVLSGCDFL 237
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPK 287
++ G+G+K+AHAL++K +S V+ L+ + VP Y E+F +A TF+H RVYDPK
Sbjct: 238 PNVRGIGIKKAHALVAKHRSIHAVLAVLRGDKKIVVPDGYHENFRRAYWTFKHARVYDPK 297
>gi|390334349|ref|XP_003723905.1| PREDICTED: uncharacterized protein LOC762697 isoform 2
[Strongylocentrotus purpuratus]
Length = 1092
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 186/308 (60%), Gaps = 9/308 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK PIHI++ +G V +D+Y W+H+GA++C+ +L KG P ++ YC+
Sbjct: 1 MGIQGLLPFLKEASEPIHIRKYKGYTVGIDSYCWIHRGAVACATQLAKGEPADHYVRYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+LR +KP+++FDG LP K E+ R R+ + + EG +S + + +
Sbjct: 61 KYVNMLRALDIKPVMVFDGRNLPAKAGVEDSRRERRETYSKKGRQFLREGKASEARDCFV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K ++++P +A +++ ++ V IVAPYEADAQ+ +L + V+AVITEDSDLI FGC
Sbjct: 121 KCINVTPEMALNVMKAVRSLGVDCIVAPYEADAQLAYLEKNGFVQAVITEDSDLIAFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFG-GFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+D G ++ S L N + G FT + MCI++GCDYL SLPG+G+ +A
Sbjct: 181 KVIVKLDLAGNCMDVDSSRL--NVAMKIGEKFTPEKFRYMCIVAGCDYLASLPGIGIGKA 238
Query: 240 HALISKFKSYD--KVIKH----LKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
L + D +VIK LK + +V P Y+E F +A TF +Q +DP+ + +
Sbjct: 239 RKLFQLTANPDITQVIKRMATTLKMKSTTVTPEYQEGFVQANNTFLYQLAFDPQKKKLQP 298
Query: 294 LSCISDNI 301
L+ S +
Sbjct: 299 LTPYSPEV 306
>gi|405966070|gb|EKC31392.1| Exonuclease 1 [Crassostrea gigas]
Length = 657
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 161/265 (60%), Gaps = 10/265 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP LK I +P+++ + EGC VA+D Y WLHKGA SC+ +L G PT +++ YCM
Sbjct: 1 MGVTGLLPFLKKIHVPVNVAKFEGCTVAIDAYCWLHKGAFSCAEKLALGEPTDQYVYYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +L +KP+L+FDG LP K + E R R+ N +A + EG + + E Q
Sbjct: 61 KYVEMLLKKNLKPVLVFDGCHLPSKKDVEKSRREKREINKKKAAQLLREGKRAEARECLQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ +DISP +A L+ + + V IVAPYEADAQ+ +L + +ITEDSDL+ FGC
Sbjct: 121 RCIDISPDMALNLMNACRARGVDCIVAPYEADAQLAYLNKCGIAQLIITEDSDLLLFGCD 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++IFKMD FG GV + S L + ++ G +T + MCILSGCDYL SL G+GL +A
Sbjct: 181 KVIFKMDHFGNGVLIEQSRLNEVMEIQSGFYTFEKFRYMCILSGCDYLSSLQGIGLGKAA 240
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPP 265
KV K + S + +PP
Sbjct: 241 ----------KVFKRARQSELKLPP 255
>gi|195437805|ref|XP_002066830.1| GK24343 [Drosophila willistoni]
gi|194162915|gb|EDW77816.1| GK24343 [Drosophila willistoni]
Length = 701
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 188/338 (55%), Gaps = 17/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ + +K++ GC VAVDTY WLHKG SC+ +L +G T ++ YC+
Sbjct: 1 MGITGLIPFLEKASKKLQLKDIRGCSVAVDTYCWLHKGVFSCAEKLARGEDTDLYVQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +L Y +KP+L+FDG LP K E +R +R+++ RA E G + +
Sbjct: 61 KYVQMLLSYDIKPVLVFDGQHLPAKALTEKRRRENRQQSKKRAAELLRLGRVEEARSQMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LIQ +++NV IVAPYEADAQM +L ++ V+ ++TEDSDL FG
Sbjct: 121 RCVDVTHEMALRLIQACRERNVDCIVAPYEADAQMAWLNKAEIVQYIVTEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++IFK+D G G+ + L + MCILSGCDYL SLPG+GL +A
Sbjct: 181 KVIFKLDLTGNGLLVEADKLHLAMSCREDRYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + D K+ ++L + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFILKTEQEDMRKALKKIPQYLNMRNLEVDDDYIENFLKAEATFKHMFIYNPLERRMERL 300
Query: 295 SCISD---------NIGNDL--DFLAKGIAIGDLDPFT 321
+ + D N G L A +A+G+L+PFT
Sbjct: 301 NALEDFETDVSLCSNAGTLLADSQEAYHLALGNLNPFT 338
>gi|406604572|emb|CCH43989.1| Exonuclease 1 [Wickerhamomyces ciferrii]
Length = 649
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 220/394 (55%), Gaps = 32/394 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG++GLLP LKSI P+ ++ G +A+D+Y+WLH+ +LSC+ EL + L T+++I +
Sbjct: 1 MGVKGLLPQLKSIQEPMTLERYRGKRLAIDSYAWLHRSSLSCAWELAQDLETTKYISFFK 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ +LRH+ ++P +FDG K + E +R + R +N + +E G+ ++EF+
Sbjct: 61 KRIMMLRHFEIEPYFVFDGDNFSSKSDTELEREQKRLKNKEKGLELLRNGDKKGAFEFFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VDI+P++A +I+ LK++ + YIVAPYEAD QM +L V+ +I+EDSDL+ FG
Sbjct: 121 KSVDITPAMAKAVIEYLKEEKIKYIVAPYEADPQMVYLEKLGLVDGIISEDSDLLVFGAQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++ K++ Q V+ + + K++ G L+ + LSGCDY +PG+G+ A
Sbjct: 181 HLLTKLNDTAQFVDIRRENFKNCKEVPIGLIDDSQLIMVACLSGCDYTSGVPGVGIVTAF 240
Query: 241 ALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS---- 295
L+ + + DK + L+ S VP ++ + KA L+F+ QRV++P T +I L+
Sbjct: 241 KLVKRLGTMDKCLMSLRLEGKSNVPQGFQLEYKKADLSFRFQRVFNPITNEISTLNEVPQ 300
Query: 296 -----------CISDNIGNDLDFLAKGIAIGDLDPFTQ--LPFQEVSDNSHLVVGQNSHL 342
CI ND+ F +A+ +LDP ++ L +EVS S N
Sbjct: 301 LMKSDEELLPECIGPLHDNDIHF---KVAMAELDPISKDTLLSREVSIKSQ---SFNVIQ 354
Query: 343 KNFKPESERKKLDLPVQKNLLTKKFTTPRISPNH 376
KP +PVQ+ + + ++TP I N+
Sbjct: 355 TPIKP--------VPVQERVAKRSYSTPVIKTNN 380
>gi|195387976|ref|XP_002052668.1| GJ20464 [Drosophila virilis]
gi|194149125|gb|EDW64823.1| GJ20464 [Drosophila virilis]
Length = 646
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 193/343 (56%), Gaps = 27/343 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ +H+K+L G VAVDTY WLHKG SC+ +L +G T ++ YC+
Sbjct: 1 MGITGLIPFLEKASAKMHLKDLSGSTVAVDTYCWLHKGVFSCADKLARGEDTDLYVQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +L Y +KPIL+FDG LP K E +R SR+++ RA+E G + + +
Sbjct: 61 KYVLMLLSYNIKPILVFDGQHLPAKALTEQRRRESRQQSKKRAMELLRLGRTDEARSQMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LIQ + +++ IVAPYEADAQM +L + + ++TEDSDL FG
Sbjct: 121 RCVDVTHEMALRLIQECRMRHIDCIVAPYEADAQMAWLNKAGIAQYIVTEDSDLTLFGAQ 180
Query: 181 RIIFKMDKFGQGV-----EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
+IIFK+D G G+ +F +M + F F + MCILSGCDYL SLPG+G
Sbjct: 181 KIIFKLDLNGAGLLVEAEKFHLAMGCTKERYRFDKFRR-----MCILSGCDYLDSLPGIG 235
Query: 236 LKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
L +A + K + D K+ ++L + V Y E+F KA TF+H +Y+P
Sbjct: 236 LAKACKFMLKTEQDDMRIALKKIPQYLNMRNLEVDDAYIENFMKAEATFKHMYIYNPLER 295
Query: 290 DIVHLSCISD---------NIGNDLDFLAKG--IAIGDLDPFT 321
+ LS + D N G+ L K +A+G+L+PFT
Sbjct: 296 RMERLSALEDHETEEGHCSNAGSLLADSEKALHLALGNLNPFT 338
>gi|323307136|gb|EGA60419.1| Exo1p [Saccharomyces cerevisiae FostersO]
Length = 702
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+P L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|349581199|dbj|GAA26357.1| K7_Exo1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296364|gb|EIW07466.1| Exo1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 702
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+P L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|365763272|gb|EHN04802.1| Exo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 702
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+P L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|151945661|gb|EDN63902.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|190407372|gb|EDV10639.1| exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|207341254|gb|EDZ69360.1| YOR033Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273419|gb|EEU08355.1| Exo1p [Saccharomyces cerevisiae JAY291]
gi|259149515|emb|CAY86319.1| Exo1p [Saccharomyces cerevisiae EC1118]
gi|323331736|gb|EGA73150.1| Exo1p [Saccharomyces cerevisiae AWRI796]
Length = 702
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+P L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|6324607|ref|NP_014676.1| Exo1p [Saccharomyces cerevisiae S288c]
gi|1706421|sp|P39875.2|EXO1_YEAST RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I; AltName: Full=Protein DHS1
gi|1041655|emb|CAA60749.1| ORF OR26.23 [Saccharomyces cerevisiae]
gi|1420150|emb|CAA99223.1| DHS1 [Saccharomyces cerevisiae]
gi|1840127|gb|AAB47428.1| Exo1p [Saccharomyces cerevisiae]
gi|285814922|tpg|DAA10815.1| TPA: Exo1p [Saccharomyces cerevisiae S288c]
Length = 702
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+P L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|323346487|gb|EGA80774.1| Exo1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 702
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+P L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|323303082|gb|EGA56885.1| Exo1p [Saccharomyces cerevisiae FostersB]
Length = 607
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+P L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|328354260|emb|CCA40657.1| exonuclease 1 [Komagataella pastoris CBS 7435]
Length = 567
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 187/339 (55%), Gaps = 14/339 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP +K+ P +++ G +A+DTY+WLH+ + EL G+ T ++I Y M
Sbjct: 1 MGVTGLLPAIKNAQKPTNLESFRGSTLAIDTYAWLHRATTTSWYELSHGVATKKYIQYVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV +L H+ + P +FDG LP K E E KR RKE + + +GN + +YQ
Sbjct: 61 KRVEMLFHFQITPYFVFDGDYLPCKAETEAKREARRKEYRKLGDQAQLQGNRKLAMNYYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K D++P +A LI K + +S++VAPYEADAQM +L + V+ +I+EDSDL+ FG
Sbjct: 121 KCCDVTPEMAKALIDEFKARQISFVVAPYEADAQMVYLEMKGFVDGIISEDSDLLVFGSR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+I K++ G+ + Q + + ++ ++ + LSGCDY + +PG+G+ +A
Sbjct: 181 SLITKLNDRGECIHVQRNNFKDCANIPGLAHLSQHQFRIVASLSGCDYTKGIPGIGVIKA 240
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ K++S DK+ L+ +P +E + A L FQ Q V+DPK VHL+ I
Sbjct: 241 FQLVRKYESIDKIFSALRLDGKFKIPASFETEYRLACLAFQFQLVFDPKLHKPVHLTDIP 300
Query: 299 DNIGNDLDF------------LAKGIAIGDLDPFTQLPF 325
++ DLD L +A G+L+P T+ P
Sbjct: 301 KDLHEDLDLIYSCAGPRYDDSLHVRVAYGELNPITKEPL 339
>gi|294657671|ref|XP_459977.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
gi|199432866|emb|CAG88226.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
Length = 678
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 185/309 (59%), Gaps = 1/309 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I + +G +AVDTY WLH+G +SC++ELC+ +PT ++I+ M
Sbjct: 1 MGVTGLLQHLKEIQDSTSLSRYKGKTLAVDTYGWLHRGLISCAQELCQDVPTKKYINSVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++++LRH+GV+P L+FDG LP K E +R R+E +A E GN +++ +
Sbjct: 61 KKIDMLRHFGVEPYLVFDGAYLPTKAETAKERRLKREEAQKKANELIKAGNRKLAWKEFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++P +A ++ L + V YIVAPYEAD QM +L V+ +++EDSDL+ FGC+
Sbjct: 121 KAAGVTPEMAKSIMVELDMRKVKYIVAPYEADPQMVYLERIGLVDGILSEDSDLLIFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+I K++ +G+ +E K + F +T++ L + +LSGCDY + +PG+GLK A
Sbjct: 181 TLITKLNDYGECIEICRDNFCNVKKIPFLSNYTQEQLRLVAMLSGCDYTKGIPGIGLKTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ +F + +KV+ L+ P +E+ KA L FQ Q+V+ P T+ + L+
Sbjct: 241 FNLVKRFNNLEKVLIALRSDGKKPPVDFEDEVYKANLAFQFQKVFSPLTKKLETLNSYPV 300
Query: 300 NIGNDLDFL 308
++ D + L
Sbjct: 301 DLKLDFEIL 309
>gi|19112842|ref|NP_596050.1| exonuclease I Exo1 [Schizosaccharomyces pombe 972h-]
gi|1706728|sp|P53695.1|EXO1_SCHPO RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I
gi|703466|gb|AAC41648.1| exonuclease [Schizosaccharomyces pombe]
gi|4007793|emb|CAA22433.1| exonuclease I Exo1 [Schizosaccharomyces pombe]
Length = 571
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 195/342 (57%), Gaps = 12/342 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLL LLK + H++E G + VD Y WLHK +C+ EL T +++ Y +
Sbjct: 1 MGIKGLLGLLKPMQKSSHVEEFSGKTLGVDGYVWLHKAVFTCAHELAFNKETDKYLKYAI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
H+ +L++YGVKP+++FDGG LP K E KR R+E + EG S + +
Sbjct: 61 HQALMLQYYGVKPLIVFDGGPLPCKASTEQKRKERRQEAFELGKKLWDEGKKSQAIMQFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++P +A +LI L++ + IVAPYEADAQ+ +L ++ +ITEDSD++ FG
Sbjct: 121 RCVDVTPEMAWKLIIALREHGIESIVAPYEADAQLVYLEKENIIDGIITEDSDMLVFGAQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++FKMD FG + + + + +DL+ + L M I SGCDY + GMGLK A
Sbjct: 181 TVLFKMDGFGNCITIRRNDIANAQDLNL-RLPIEKLRHMAIFSGCDYTDGVAGMGLKTAL 239
Query: 241 ALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS---- 295
+ K+ I+ ++ ++ VP +E+ F A L F+HQRVY PK + +VHLS
Sbjct: 240 RYLQKYPEPRAAIRAMRLDKSLKVPVSFEKEFALADLAFRHQRVYCPKDKTLVHLSPPER 299
Query: 296 --CISDN--IGNDLDF-LAKGIAIGDLDPFTQLPFQEVSDNS 332
+ ++ IG+ D LA IA G +P T+ F ++ D+S
Sbjct: 300 ELSVHEDAFIGSFFDNQLAIDIAEGRSNPITKCAF-DIKDSS 340
>gi|195035513|ref|XP_001989222.1| GH10168 [Drosophila grimshawi]
gi|193905222|gb|EDW04089.1| GH10168 [Drosophila grimshawi]
Length = 631
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 188/343 (54%), Gaps = 27/343 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ +H+K++ G VAVDTY WLHKG SC+ +L +G T ++ YC+
Sbjct: 1 MGITGLIPFLEKASARVHLKDMRGSTVAVDTYCWLHKGVFSCAEKLARGEDTDLYVQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V LL Y +KPIL+FDG LP K E +R SR+++ RA E G + +
Sbjct: 61 KYVQLLVSYNIKPILVFDGQHLPAKALTEQRRRESRQQSKKRAAELLRLGRVEEARSQMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI ++ + IVAPYEADAQM +L + + ++TEDSDL FG
Sbjct: 121 RCVDVTHEMALRLIHECRELKIDCIVAPYEADAQMAWLNRAGIAQYIVTEDSDLTLFGAQ 180
Query: 181 RIIFKMDKFGQGV-----EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
RIIFK+D G G+ + +M + + F F + MCILSGCDYL SLPG+G
Sbjct: 181 RIIFKLDLSGAGLLVDAEKLHLAMGCREERFQFDKFRR-----MCILSGCDYLDSLPGIG 235
Query: 236 LKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
L +A + K + D K+ ++L + V Y E+F KA TF+H +Y+P
Sbjct: 236 LAKACKFMLKTEQDDMRIALKKIPQYLNMRNLEVDDAYIENFMKAEATFKHMYIYNPLER 295
Query: 290 DIVHLSCISDN------IGNDLDFLAKG-----IAIGDLDPFT 321
+ LS + +N N LA +A+G+L+PFT
Sbjct: 296 RMERLSALENNETDESYCSNAGSLLADNEQALHLALGNLNPFT 338
>gi|348670262|gb|EGZ10084.1| hypothetical protein PHYSODRAFT_523066 [Phytophthora sojae]
Length = 2851
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 199/340 (58%), Gaps = 27/340 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP+LKS+ +H+ + G V VD WL+KGA SC +L G PT ++++ +
Sbjct: 2076 MGVTGLLPVLKSVTDQVHVSKYAGKTVGVDASGWLYKGAYSCPVDLVLGRPTDAYLNFSI 2135
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARA----IECESEGNSSASY 116
++ LL+ + + PIL+FDG LP K + R+RSR E +A E E + + A +
Sbjct: 2136 QQIKLLQEHDITPILVFDGAPLPAKARENAARSRSRAEWKLKAEKLLKEKEDDRDGRAVF 2195
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
+AV ++ + +LI VL++ N+++ VAPYEADAQ+ FL+ K V+ VI++DSD +P
Sbjct: 2196 SACTRAVSVTNEMVMKLIAVLRRMNITFYVAPYEADAQLAFLSRQKIVDVVISDDSDCVP 2255
Query: 177 FGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
+G ++FK+ G G E + L N++LSF G+T++ML CIL+GCDY S+ G+G+
Sbjct: 2256 YGVKTVLFKLSPDGWGSELKRRSLGANEELSFVGWTEEML---CILAGCDYCPSVSGVGI 2312
Query: 237 KRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS- 295
A+ L+S+FK+ ++ K S +P +EE + A+LT++HQ V+DP+ + LS
Sbjct: 2313 INAYKLVSQFKT---PVEKQKGSV--LPDNFEEHYYSAILTYRHQLVFDPRNAKLKMLSP 2367
Query: 296 -----CISDNIGNDLDFLA---------KGIAIGDLDPFT 321
I + L FL + IA+G + P T
Sbjct: 2368 LDVSKGILPRVDKGLHFLGNVELRDDVVESIALGQIHPVT 2407
>gi|119190955|ref|XP_001246084.1| hypothetical protein CIMG_05525 [Coccidioides immitis RS]
Length = 677
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 173/272 (63%), Gaps = 9/272 (3%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
MHRV +L +YGV P L+FDGG LP K E RA R+E+ +E G +S + +
Sbjct: 1 MHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQEL 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QKAVD++P +A LI+ LK+ NV YIVAPYEADAQ+ +L V +I+EDSD++ FG
Sbjct: 61 QKAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGA 120
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++ K+DK G +E S +D+S G+T + +MCILSGCDYL ++P +GLK A
Sbjct: 121 KVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTA 180
Query: 240 HALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ + ++K+ +KV+K +++ S VPP Y E F +A LTF HQRV+ P+ +V L+ +
Sbjct: 181 YRKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFKRAELTFLHQRVFCPRARKLVTLNPLP 240
Query: 299 DN-------IGNDLDF-LAKGIAIGDLDPFTQ 322
++ IGND++ +A GIA GDLDP TQ
Sbjct: 241 NSAHEGLTFIGNDIEPDIAIGIACGDLDPITQ 272
>gi|366999787|ref|XP_003684629.1| hypothetical protein TPHA_0C00380 [Tetrapisispora phaffii CBS 4417]
gi|357522926|emb|CCE62195.1| hypothetical protein TPHA_0C00380 [Tetrapisispora phaffii CBS 4417]
Length = 784
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 180/303 (59%), Gaps = 2/303 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK+I P+ + G +A+D Y+WLH+ SC+ +L G PT +++ + +
Sbjct: 1 MGIQGLLPQLKNIQNPVSLNRYSGETLAIDGYAWLHRATFSCAHDLVLGNPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L+ Y ++P L+FDG LP+K + E KR R EN + AI+ + G + E++Q
Sbjct: 61 KKFAMLKSYNIQPYLVFDGNSLPVKKQTEVKRKEKRTENRSIAIKLWNSGERRNAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I K + Y+VAPYEAD Q+ +L K V +I+EDSDL+ FGC
Sbjct: 121 KSVDVTPEMAKCVIDYCKLHGIKYVVAPYEADPQLVYLEKHKIVHGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K++ FG+ +E + + Q K T + M LSGCDY + +GL RA
Sbjct: 181 KLITKLNDFGECIEICRDNFNQVPKKFPIYELTDDQIRVMVCLSGCDYTDGILKIGLIRA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSV-PPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ + K+ DK+I L+ SV P + + KA L FQ+QRVY P + IV L+ ++
Sbjct: 241 IKLVRQHKTMDKIILALQREGKSVIPKTFLMEYYKACLAFQYQRVYCPNQKKIVSLNDLT 300
Query: 299 DNI 301
D +
Sbjct: 301 DEV 303
>gi|395327368|gb|EJF59768.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 326
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 188/309 (60%), Gaps = 9/309 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK I H+ E G +AVD Y WLH+G C+ E+ G TS++++Y M
Sbjct: 1 MGISGLLPLLKDIHNTKHLSEFRGQTLAVDAYVWLHRGTYGCAAEIATGKKTSKYVEYAM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HRV LLRH+G+ P L+FDGG LP K E +R R E LARA ++G + + E Y
Sbjct: 61 HRVRLLRHHGIAPFLVFDGGPLPAKKGTEAERRARRAEALARANALAAQGEHARARECYV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A++LI+ L+ + V Y+VAPYEADAQ+ +L V+ ++TEDSDL+ FGC
Sbjct: 121 KCVDVTPQMAYQLIKALRVEGVPYVVAPYEADAQLAYLERIGLVDGIMTEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGV------EFQ--CSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
++FK+D V +F S LS G++ M ILSGCDYL S+P
Sbjct: 181 NVLFKLDPAAATVTHISRADFAAVASADGGGSGLSLLGWSDAQFRTMAILSGCDYLPSIP 240
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+GLK A AL+ K ++ + ++ L+ VP Y ++F +A F HQRVYDP E +
Sbjct: 241 GIGLKTAWALLRKHRTVENMVDALRLEGKKKVPKGYLDAFRRAERVFMHQRVYDPAQECL 300
Query: 292 VHLSCISDN 300
V+L+ + ++
Sbjct: 301 VYLTPLPED 309
>gi|195344874|ref|XP_002039001.1| GM17073 [Drosophila sechellia]
gi|194134131|gb|EDW55647.1| GM17073 [Drosophila sechellia]
Length = 732
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 183/338 (54%), Gaps = 17/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P + +H+K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L Y +KPIL+FDG LP K E +R SRK++ RA E G + +
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
IIFK+D G G+ + L + + MCILSGCDYL SLPG+GL +A
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + D K+ +L + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFILKTEQEDMRIALKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRL 300
Query: 295 SCISD---------NIGNDLD--FLAKGIAIGDLDPFT 321
+ D N G L+ A +A+G+L+PF+
Sbjct: 301 CALEDYETDERYCSNAGTLLEDSVQALHLALGNLNPFS 338
>gi|50553030|ref|XP_503925.1| YALI0E14014p [Yarrowia lipolytica]
gi|49649794|emb|CAG79518.1| YALI0E14014p [Yarrowia lipolytica CLIB122]
Length = 546
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 213/409 (52%), Gaps = 32/409 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLK I HI E +G +AVD ++WLHK A + +L PT R + M
Sbjct: 1 MGVSGLLPLLKPIQAAAHISEFKGQRLAVDGFAWLHKAAFGSAEDLALNRPTDRPQQWVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V L+ GV +++FDGG LP K + KR R + A+ S G S + +Q
Sbjct: 61 RKVEFLKRCGVDVLIVFDGGALPSKRGTDEKRHALRDQAHKEALALMSRGRRSEAVNLFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA I+ + H+L ++LK Q + ++VAPYEADAQ+ +L + +I+EDSDL+ +G
Sbjct: 121 KATRITQEMVHQLTELLKSQRIPFVVAPYEADAQLVYLEKAGYATGIISEDSDLVVYGAQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGG-FTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++ K+D G V S + DL G + L M ILSGCDY +P +G KRA
Sbjct: 181 MLVTKLDPSGGCVTVDGSRISSCSDLELGSEVPLEYLRYMAILSGCDYCDGVPNVGPKRA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
I ++++ + +IK L+ + P + E F A TF +QRVY P+ +VHL+ D
Sbjct: 241 ARYIRRWQTPEAIIKALRMDGYNSSPDFLERFHAANFTFLYQRVYCPEARRLVHLNEPED 300
Query: 300 NIGNDLDF---------LAKGIAIGDLDPFTQ--LPFQEVSDNSHL---VVGQNSHLKNF 345
+ +DF LA+ IA G + P T P + + ++L +N + +
Sbjct: 301 ELDEKVDFHIGAEIPQGLARAIATGLVHPRTHKTFPANKTAKPTNLRGFFAPKNEYTGDV 360
Query: 346 K--PESERKK---------LDLPVQ----KNLL--TKKFTTPRISPNHF 377
K PE R+K +DL V+ +N+L T+ T+P ++ +HF
Sbjct: 361 KRLPEQLRRKKPVVLVAKPVDLAVRTASAENMLSPTRTKTSPALTSSHF 409
>gi|323352397|gb|EGA84932.1| Exo1p [Saccharomyces cerevisiae VL3]
Length = 702
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 181/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +LL+ + V+ L+FDG +P+K E+KR RKEN A A + G + +++Q
Sbjct: 61 KRFSLLKTFKVEXYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + ++ K G T + ++ M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ +F + +++I + + + +P Y + AVL FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVRRFNTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRKKIVSLNEI 299
>gi|444315221|ref|XP_004178268.1| hypothetical protein TBLA_0A09650 [Tetrapisispora blattae CBS 6284]
gi|387511307|emb|CCH58749.1| hypothetical protein TBLA_0A09650 [Tetrapisispora blattae CBS 6284]
Length = 751
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 182/301 (60%), Gaps = 4/301 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK+I P+ ++ EG +A+D Y+WLH+ A SC+ EL +PT R++ + +
Sbjct: 1 MGISGLLPQLKTIQNPVSLRRYEGQTLAIDGYAWLHRAAFSCAYELAMDIPTDRYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ ++LR + ++P L+FDG LP+K E KR R ++ AI + G + +++Q
Sbjct: 61 KKFSMLRTFNIEPYLVFDGDSLPVKKNTEKKRRTKRDDSKEIAIRLWNAGEKRNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+V I+P +A +I K ++ YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KSVSITPEMAKCIIDYCKNNHIRYIVAPFEADSQMVYLEKKGIVQGIISEDSDLLIFGCQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF--GGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
R+I K++ + + +E CS+ + F G T ++ M LSGCDY +P +GL
Sbjct: 181 RLITKLNDYAECIEI-CSLDFGKLTVKFPLGKLTPLEMIAMVCLSGCDYTDGIPKIGLVN 239
Query: 239 AHALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
A LI + S D+++ +L+ + ++P +E+ + A FQ QRV+ P + +VHL+ I
Sbjct: 240 AMKLIQQHHSMDRILLNLRRAGKHNIPENFEQEYKNATFAFQFQRVFCPIGQKLVHLNDI 299
Query: 298 S 298
S
Sbjct: 300 S 300
>gi|443709639|gb|ELU04231.1| hypothetical protein CAPTEDRAFT_95129 [Capitella teleta]
Length = 423
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 171/301 (56%), Gaps = 6/301 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK+I+ P HI+ GC VA+D Y WLHKGA +C+ +L G T ++ YCM
Sbjct: 1 MGIQGLLPFLKNILTPSHIRNYRGCTVAIDAYCWLHKGAFACAEKLAAGEKTDMYVYYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+N+L Y +KPIL+ DG LP K E KR R+ N +A + +G + +
Sbjct: 61 KYINMLLSYDIKPILVLDGCHLPSKKNVEKKRRERRELNRKKAAQLLRDGKRKEARDALV 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ +DI+P +A EL+ + + V I APYEADAQ+ +L+ + + +ITEDSDLI FGC
Sbjct: 121 QCIDITPQMALELMNACRDKGVDCITAPYEADAQLAYLSQTGIAQVIITEDSDLILFGCH 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
I+FKMD G G+ Q L K L +T MC+LSGCDY +LPG+GL +A
Sbjct: 181 TIMFKMDTSGAGMLIQNKDLNKAMKLQDAHYTFDKFRYMCMLSGCDYHANLPGIGLSKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+ + D K+ L ++V Y E F +A TF +Q V+DP + + L
Sbjct: 241 KAMKLTRQIDVRLILKKIPMLLNIRNLTVSAEYIEGFIRADNTFLYQLVFDPLSRKLTPL 300
Query: 295 S 295
+
Sbjct: 301 N 301
>gi|17137168|ref|NP_477145.1| tosca [Drosophila melanogaster]
gi|74873405|sp|Q24558.1|EXO1_DROME RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I; AltName:
Full=Protein tosca
gi|1419491|emb|CAA61431.1| Tosca [Drosophila melanogaster]
gi|7298467|gb|AAF53687.1| tosca [Drosophila melanogaster]
gi|223029525|gb|ACM78484.1| FI07641p [Drosophila melanogaster]
Length = 732
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 183/338 (54%), Gaps = 17/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P + +H+K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L Y +KPIL+FDG LP K E +R SRK++ RA E G + +
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
IIFK+D G G+ + L + + MCILSGCDYL SLPG+GL +A
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + D K+ +L + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFILKTEQEDMRIALKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRL 300
Query: 295 SCISD---------NIGNDLDFLAKG--IAIGDLDPFT 321
+ D N G L+ + +A+G+L+PF+
Sbjct: 301 CALEDYETDERYCSNAGTLLEDSEQALHLALGNLNPFS 338
>gi|15291899|gb|AAK93218.1| LD31018p [Drosophila melanogaster]
Length = 732
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 183/338 (54%), Gaps = 17/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P + +H+K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L Y +KPIL+FDG LP K E +R SRK++ RA E G + +
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
IIFK+D G G+ + L + + MCILSGCDYL SLPG+GL +A
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + D K+ +L + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFILKTEQEDMRIALKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRL 300
Query: 295 SCISD---------NIGNDLDFLAKG--IAIGDLDPFT 321
+ D N G L+ + +A+G+L+PF+
Sbjct: 301 CALEDYETDERYCSNAGTLLEDSEQALHLALGNLNPFS 338
>gi|242016342|ref|XP_002428788.1| exonuclease, putative [Pediculus humanus corporis]
gi|212513473|gb|EEB16050.1| exonuclease, putative [Pediculus humanus corporis]
Length = 744
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 270/556 (48%), Gaps = 49/556 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP L + HI E E VAVD Y WLHK CS E+ PT+++I YCM
Sbjct: 1 MGIQGLLPFLSNSTREGHISEFENEYVAVDAYVWLHKSIYCCSYEIAMKKPTTKYITYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L+H+ VKPIL+FDG L K + E KR R L++ + G +
Sbjct: 61 RYIEMLQHFKVKPILVFDGRDLISKEQTEKKRREERSRKLSKGLNLLRAGKIVEGKQLIG 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++VD+S + L++ ++ N+ IVAPYEADAQ+ + +++K V ++TEDSDL+ +GC
Sbjct: 121 ESVDVSHDLVVNLMKECRKMNIDCIVAPYEADAQLAYFSINKIVSCIVTEDSDLLAYGCE 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FKM+K G+G + + + K+ + F+++ MCIL GCDYL SLP +G A
Sbjct: 181 KVMFKMEKNGRGKIVEKNNIYKSLGIKEEDFSEEKFRHMCILCGCDYLPSLPSIGPANAS 240
Query: 241 ---ALISKFKSYD---KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
LIS K+ D ++ +L ++V P Y E F A TF++Q VYDP V L
Sbjct: 241 KFIKLISDKKTVDCLPQLPIYLNKLKITVSPEYIEGFKVADNTFKYQLVYDPFLRMQVPL 300
Query: 295 SCISDN-------IGNDLDFLAKGIAIGDLDPFTQLPFQEVSDNSH-------LVVGQNS 340
+SD + ND F +AIG++DP T L ++
Sbjct: 301 RPLSDGAEPVGKMLPNDEAF---QLAIGNIDPSTMLLVDNYDPDTAGKGFKYLWKTTTTK 357
Query: 341 HLKNFKPESE---RKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASC 397
K F ES+ +++ ++ + K L K + I +F P+ S S E +
Sbjct: 358 EEKQFSQESQVNNKRQSEVTLNKPYLKKYCQSKDIVNENFDPKLNKSKSAFEFSQNKHK- 416
Query: 398 DISCQSSSRMELETVGNFPHNSS---EKNCFASEVPEFSASPSREMENERNAEHTSLPQF 454
SSS L NF +N S F S E + ++E +N SL ++
Sbjct: 417 ----NSSS---LSQSKNFDYNESSFVSSRYFKSNKIEKKDKKTEKIERLKNE---SLEEY 466
Query: 455 CRSI-RNPCPALRKEH---ENKNCTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQ 510
C+ + N ++ EN+ T + V + E RK IV+ F N DD
Sbjct: 467 CQRLHENYFTETDNDNDVIENEKVTINNVSQKFDEIRKNIVKKCTF-----NNDDDSINS 521
Query: 511 EKLVVENDAAIDMSEN 526
K++++N+ +S N
Sbjct: 522 RKIIIKNETDERVSAN 537
>gi|403361276|gb|EJY80337.1| 5'-3' exonuclease (including N-terminal domain of PolI) [Oxytricha
trifallax]
Length = 714
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 195/319 (61%), Gaps = 18/319 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS---RHID 57
MGIQGLLP LK++ HI+E +G + VD W+H+GA C+REL + P + ID
Sbjct: 1 MGIQGLLPALKALQKEKHIREFKGKTIGVDGLCWMHQGAYQCARELMRDNPWQGLEKVID 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMK--IEQENKRARSRKENLARAIECESEGNSSAS 115
YC+ ++ L+ G+ PI++FDG LPMK IE++ K+AR NLA + ++G+ +
Sbjct: 61 YCVGKIKQLQINGITPIMVFDGARLPMKKRIEEQRKKAREDSRNLAE--DLLAKGDQHQA 118
Query: 116 YEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
+ +AV+I+ + + L QVL+ NV ++VAPYEADAQ+ L + +V+ +ITEDSDL+
Sbjct: 119 IRKFMEAVEINSLMIYRLTQVLETMNVQFVVAPYEADAQLAHLFKTGKVDLIITEDSDLL 178
Query: 176 PFGCSRIIFKMDKFGQGVEF------QCSMLQKNKDLSFGG--FTKQMLLEMCILSGCDY 227
+G +R++FKMD GQG+ QC + + S GG F +LL+ CIL+GCDY
Sbjct: 179 VYGVTRVLFKMDPQGQGIYIDLNNLNQCDAFKMPQ--SNGGKVFDYDLLLKTCILNGCDY 236
Query: 228 LQSLPGMGLKRAHALISKFKS-YDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
+SL G+G K A L+ ++ ++++ L+ + + Y + F +A LTF++Q V+D
Sbjct: 237 CESLKGVGFKTALKLMKEYNGDIRQIVESLRGKNIPIRQNYMQDFQRAELTFKYQVVFDM 296
Query: 287 KTEDIVHLSCISDNIGNDL 305
+ + +L+ + DNI + +
Sbjct: 297 ENKKQKYLNELPDNISDSI 315
>gi|194880099|ref|XP_001974365.1| GG21694 [Drosophila erecta]
gi|190657552|gb|EDV54765.1| GG21694 [Drosophila erecta]
Length = 732
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 185/343 (53%), Gaps = 27/343 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P + +H+K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDIYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L Y +KPIL+FDG LP K E +R SRK++ RA E G + +
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRVSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +NV IVAPYEADAQM +L + +ITEDSDL FG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNKVDVAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQ-----KNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
IIFK+D G G+ + L K + F F + MCILSGCDYL SLPG+G
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCKEEKYHFDKFRR-----MCILSGCDYLDSLPGIG 235
Query: 236 LKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
L +A I K + D K+ +L + V Y E+F KA TF+H +Y+P
Sbjct: 236 LAKACKFILKTEQEDMRIALKKIPSYLNMRNLEVDDDYIENFMKAEATFKHMFIYNPLER 295
Query: 290 DIVHLSCISD---------NIGNDLDFLAKG--IAIGDLDPFT 321
+ L + D N G L+ + +A+G+L+PF+
Sbjct: 296 RMQRLCALEDYETDERYCSNAGTLLEDSEQALHLALGNLNPFS 338
>gi|195484202|ref|XP_002090593.1| GE12717 [Drosophila yakuba]
gi|194176694|gb|EDW90305.1| GE12717 [Drosophila yakuba]
Length = 730
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 19/339 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P + +H+K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L Y +KPIL+FDG LP K E +R SRK++ RA E G + +
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG
Sbjct: 121 RCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNKADVAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
IIFK+D G G+ + L + + MCILSGCDYL SLPG+GL +A
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCNEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + D K+ +L + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFILKTEQDDMQIALRKIPSYLNMRNLEVNDDYIENFMKAEATFKHMFIYNPLERRMQRL 300
Query: 295 SCISDNIGNDLDFLAKG------------IAIGDLDPFT 321
C ++ G D + + +A+G+L+PF+
Sbjct: 301 -CPLEDYGTDERYCSNAGTLLEDSEQALHLALGNLNPFS 338
>gi|340374507|ref|XP_003385779.1| PREDICTED: exonuclease 1-like [Amphimedon queenslandica]
Length = 650
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 186/338 (55%), Gaps = 22/338 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTS 53
MGI+ LLP L+ +H+ G AVD Y WLH+GA SC EL + LP
Sbjct: 1 MGIKNLLPFLQGAQRDVHLASFRGKTAAVDAYCWLHRGAYSCPFELQLAKKEKIQNLPL- 59
Query: 54 RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
+++CM RVNLLR Y + PIL+FDG LPMK + E +R R + EG +
Sbjct: 60 --LNFCMKRVNLLRQYDINPILVFDGANLPMKHDTEKERKERRDSYRKQGKALLKEGKEA 117
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
+ E +Q+ V+ISP IA I +L ++ V IVAPYEADAQ+ +L + VITEDSD
Sbjct: 118 EARECFQRCVEISPEIASAFINLLYKEKVEVIVAPYEADAQLAYLVKEGLADFVITEDSD 177
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPG 233
L+ FG S++ FKM+ G G + + K + S GFT +CIL GCDYL S+ G
Sbjct: 178 LLAFGVSQVFFKMNDTGHGKLMELRDIAKG-NPSLKGFTPDSFRHLCILCGCDYLPSVHG 236
Query: 234 MGLKRAHALISKF-KSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
+G A L+ K K KVI++LK S VPP YEE F +A F +Q V+DP+++
Sbjct: 237 IGPVTAAKLMKKCNKDPYKVIRYLKSGSKHKVPPGYEEHFRQADQAFLYQLVFDPRSQSQ 296
Query: 292 VHLSCISDNIGNDLDFLA--------KGIAIGDLDPFT 321
V L+ ++ L++ G+A G+++P T
Sbjct: 297 VRLNTPPPDV-EKLEYAGIFNSPSKQVGLARGNINPLT 333
>gi|195115002|ref|XP_002002056.1| GI14203 [Drosophila mojavensis]
gi|193912631|gb|EDW11498.1| GI14203 [Drosophila mojavensis]
Length = 661
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 191/343 (55%), Gaps = 27/343 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ +++K+L G VAVD+Y WLHKG SC+ ++ +G T ++ YCM
Sbjct: 1 MGITGLIPFLEKASAKVNLKDLRGSTVAVDSYCWLHKGVFSCAEKIVRGEDTDLYVQYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +L Y +K IL+FDG LP K E +R +R+++ RA E G + +
Sbjct: 61 KFVQMLMSYDIKVILVFDGQHLPAKALTEQRRREARQQSQKRAKELLRLGRVEEARSQMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LIQ +++NV IVAPYEADAQM +L + E +ITEDSDL FG
Sbjct: 121 RGVDVTHEMALRLIQRCRERNVDCIVAPYEADAQMAWLNKAGIAEYIITEDSDLTLFGAE 180
Query: 181 RIIFKMDKFGQGV-----EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
++IFK+D G G+ +F +M + F F + MCILSGCDYL SLPG+G
Sbjct: 181 KVIFKLDLNGNGLLVEADKFHLAMGCSKERYHFEKFRR-----MCILSGCDYLDSLPGIG 235
Query: 236 LKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
L +A I K + D K+ ++L + V Y E+F KA TF+H +Y+P +
Sbjct: 236 LAKACKFILKTEQDDMRIALKKIPQYLNMRNLEVDDDYIENFMKAEATFKHMYIYNPLEK 295
Query: 290 DIVHLSCISD---------NIGNDLDFLAKG--IAIGDLDPFT 321
+ L + D N G+ L K +A+G+L+PFT
Sbjct: 296 RMERLHALEDYETDERYCSNAGSLLTDSEKAMQLALGNLNPFT 338
>gi|1419489|emb|CAA61430.1| Tosca [Drosophila melanogaster]
Length = 732
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 182/338 (53%), Gaps = 17/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P + +H+K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L Y +KPIL+FDG LP K E +R SRK++ RA E G + +
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ + LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG
Sbjct: 121 RCVDVTHDMTLRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
IIFK+D G G+ + L + + MCILSGCDYL SLPG+GL +A
Sbjct: 181 NIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
I K + D K+ +L + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFILKTEQEDMRIALKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRL 300
Query: 295 SCISD---------NIGNDLDFLAKG--IAIGDLDPFT 321
+ D N G L+ + +A+G+L+PF+
Sbjct: 301 CALEDYETDERYCSNAGTLLEDSEQALHLALGNLNPFS 338
>gi|50289437|ref|XP_447150.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526459|emb|CAG60083.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 178/306 (58%), Gaps = 2/306 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG + +D Y+WLH+ + SC+ EL GLPT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVSLRRYEGQTLGIDGYAWLHRASCSCAYELAMGLPTEKYLKFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R N+L+ +GV P L+FDG + +K E KR R+EN A+ GN + +++Q
Sbjct: 61 KRFNMLKSFGVTPYLVFDGDSINVKQETNKKRREKRQENREIAMRLWQSGNKRNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P + +I K + YIVAP+EAD QM +L ++ +I EDSDL+ FGC
Sbjct: 121 KCVDVTPEMVKCVIDYCKNNGIKYIVAPFEADPQMVYLEKKGLIQGIIAEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R++ K++ FG+ +E + S Q G + + + M LSGCDY +P +GL +A
Sbjct: 181 RLVTKLNDFGECIEICRDSFGQLTSKFPIGQLSNEEIRMMVCLSGCDYTNGIPRIGLIKA 240
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ ++ D+++ L+ SVP + + + A +FQ QRV+ P ++ IV L+ I
Sbjct: 241 IKLVMTHRNMDRILMSLQTEGKFSVPENFYDEYRYADYSFQFQRVFCPLSKQIVSLTEIP 300
Query: 299 DNIGND 304
+ +D
Sbjct: 301 MGLQSD 306
>gi|365758410|gb|EHN00253.1| Exo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 703
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 194/353 (54%), Gaps = 33/353 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSI P+ ++ EG +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIQGLLPQLKSIQNPVSLRRYEGEVLAIDGYAWLHRAACSCAYELAMGKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R++LL+ + V+P L+FDG +P+K E KR R+EN A A + G + +++Q
Sbjct: 61 KRLSLLKTFKVEPYLVFDGDAIPVKKSTEFKRRDKRQENKAIAERLWACGERKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K + YIVAP+EAD+QM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPDMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQK-NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E K K G T + + M LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECLEICRDNFNKLPKKFPLGLLTDEEIRTMVCLSGCDYTNGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS--- 295
L+ +F + ++++ + + ++P Y + + AV FQ QRV+ P + IV L+
Sbjct: 241 MKLVRRFNTMERILLRIQREGKFAIPDAYIDEYEAAVYAFQFQRVFCPIQKRIVSLNEIP 300
Query: 296 ---------------CISDNI------------GNDLD-FLAKGIAIGDLDPF 320
CI I ND+D L IA GDL+P+
Sbjct: 301 LHLRDTESKRKKLYECIGHVIHRETQKRQIVHFDNDIDHHLHFKIAQGDLNPY 353
>gi|291241252|ref|XP_002740527.1| PREDICTED: exonuclease 1-like [Saccoglossus kowalevskii]
Length = 885
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 175/307 (57%), Gaps = 8/307 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLPL+K P +I + G VAVDTY WLHKGA +C+ +L KG T +++ Y +
Sbjct: 1 MGIQGLLPLMKDATEPANISKYAGYTVAVDTYCWLHKGAFACAMQLAKGEKTDQYVRYVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L VKPIL+FDG LP K E R R+ LA+ + EG S + + +
Sbjct: 61 KFVNMLLSMNVKPILVFDGCNLPSKESVEKSRRERRQTYLAKGKQFLREGKVSEARDCFT 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K V+++ +A +++Q + V IVAPYEADAQ+ +L + VITEDSDL+ FGC
Sbjct: 121 KCVNVTSKMALDVMQAARSLGVDCIVAPYEADAQLAYLNRVGIAQCVITEDSDLVAFGCD 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGG-FTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+++ KMD G G+E S L NK + G ++ MCI SGCDYL SLP +GLK+A
Sbjct: 181 KVMVKMDLNGNGLEIDKSKL--NKIMKMGSKYSFDKFRYMCIASGCDYLASLPNIGLKKA 238
Query: 240 HALISKFKSYD-----KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+ + D K H S + VPP Y + F +A TF HQ V+DP + L
Sbjct: 239 CKIFQLATNPDLTHVLKRFGHYLKSNIVVPPEYIQGFIQANNTFLHQIVFDPIKRKSLPL 298
Query: 295 SCISDNI 301
+ D+I
Sbjct: 299 TPYPDDI 305
>gi|388582387|gb|EIM22692.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 649
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 214/399 (53%), Gaps = 46/399 (11%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKG--LP------- 51
+GI GL+P+LK P HI E +G +A+D Y LH+GA SC E+ K +P
Sbjct: 4 LGISGLIPILKDASKPKHISEYKGQTLAIDAYVLLHRGAFSCPAEIVKASLIPDIDKRNL 63
Query: 52 -----TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIEC 106
++R ++Y + ++ + VKP ++FDGG L K E R SR +NL A++
Sbjct: 64 AISQLSTRFLNYAIFQIKAMISIKVKPFVVFDGGPLGAKQHTETNRDESRAKNLEIALKL 123
Query: 107 ESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
ES+G + + + + K VDI+P +A+ELI+VL V YIVAPYEADAQM L V+
Sbjct: 124 ESQGKKTQARQAFSKCVDITPRMAYELIKVLLSLKVDYIVAPYEADAQMYHLERLGIVDG 183
Query: 167 VITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ----KNKDLSFGGFTKQMLLEMCIL 222
+ITEDSDL+ FG ++IFK+ + G E K L G +T M +L
Sbjct: 184 IITEDSDLLVFGAKKVIFKLRQDGSCDEVSRDRFGLVRIDGKALCSGKWTDVHFRRMAML 243
Query: 223 SGCDYLQSLPGMGLKRAHALISK-FKSYDKVIKHLKYS----TVSVPPFYEESFGKAVLT 277
SGCDYL+SLPG+GLK+A + + +++D + + ++ VP Y+ F A L
Sbjct: 244 SGCDYLKSLPGVGLKKAFDAVRRGGETFDMIFIYFTHNYENKVRKVPEEYKFKFKLADLA 303
Query: 278 FQHQRVY----------DPKTEDIVHLSCISDNIGNDL-DFLAKGIAIGDLDPFTQLPFQ 326
F HQR++ +P +D++ I+D IG+D+ D LA+GIA+GD+ P ++
Sbjct: 304 FLHQRIWCPIERRIKPLNPLPDDLIGNEEINDWIGSDMPDELAEGIAMGDVCPVSK---- 359
Query: 327 EVSDNSHLVVGQNSHLKNFKPESERKKLD--LPVQKNLL 363
L + + ++KP S +D P QK+L
Sbjct: 360 ------ELFISSGATATSYKPMSNHNAIDGKRPPQKSLF 392
>gi|125986267|ref|XP_001356897.1| GA10293 [Drosophila pseudoobscura pseudoobscura]
gi|54645223|gb|EAL33963.1| GA10293 [Drosophila pseudoobscura pseudoobscura]
Length = 709
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 186/338 (55%), Gaps = 17/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ + +K++ G VAVDTY WLHKG SC+ +L +G +++ YC+
Sbjct: 1 MGITGLIPFLEKASSKLQLKDIRGSTVAVDTYCWLHKGVFSCAEKLARGEDCDQYVQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L Y +KPIL+FDG LP K E +R SR+++ RA E G + +
Sbjct: 61 KYIQMLLSYDIKPILVFDGQHLPAKALTEKRRRESRQQSKQRAAELLRLGRVEEARSQMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG
Sbjct: 121 RCVDVTHEMALRLIRECRNRNVDCIVAPYEADAQMAWLNKANIAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++IFK+D G G+ + L + + MCILSGCDYL SLPG+GL +A
Sbjct: 181 KVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+ K + D K+ +L S + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFMLKTEQDDMRIALKKIPSYLNMSKLEVDDDYIENFMKAEATFKHMFIYNPLQRRMERL 300
Query: 295 SCISD---------NIGNDLD--FLAKGIAIGDLDPFT 321
+ + N G L+ LA +A+G+L+PF+
Sbjct: 301 CALEEYETDESYCSNAGTLLEDSHLALHLALGNLNPFS 338
>gi|50309395|ref|XP_454705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643840|emb|CAG99792.1| KLLA0E16743p [Kluyveromyces lactis]
Length = 671
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 194/350 (55%), Gaps = 30/350 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP LK I P+ + +G +A+D Y+WLH+ A SC+ EL PT +++ + +
Sbjct: 1 MGVSGLLPQLKPIQNPVSLARYQGETLAIDGYAWLHRSAHSCAMELAMDQPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+++LRH+ + P +FDG + +K E E KRA RKEN +A G+ +Y+++Q
Sbjct: 61 KRISMLRHFKITPFFVFDGDSIQVKKETELKRAEKRKENREKAHALFEAGDRRLAYDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K V I+P +A +I+ L+ ++ Y+VAPYEADAQM +L V+ +I+EDSDL+ FGC+
Sbjct: 121 KCVSITPDMAKCVIEYLQMNSIPYVVAPYEADAQMVYLEKQGLVQGIISEDSDLLVFGCT 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF--GGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
R+I K++ + +E ++ + F T+ L + LSGCDY +P +GL
Sbjct: 181 RLITKLNDNAECIEIDRRNFERLNEGKFPLSKLTEDQLRSLVCLSGCDYTSGIPKVGLVT 240
Query: 239 AHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
A + K ++ +++I +K +SVP + E + A FQ QRV+ P E +V L+ I
Sbjct: 241 AMKYVVKNRTMEQMIMAIKREGKLSVPHTFWEEYQYANFAFQFQRVWCPLNERLVTLNAI 300
Query: 298 SDNIGND---------------------LDF------LAKGIAIGDLDPF 320
+ + N+ DF L K I++G+L+P+
Sbjct: 301 PNELLNNEKLFNCIGHAIHKEWKIKDVIFDFEDVDHHLHKRISLGELNPY 350
>gi|255714619|ref|XP_002553591.1| KLTH0E02398p [Lachancea thermotolerans]
gi|238934973|emb|CAR23154.1| KLTH0E02398p [Lachancea thermotolerans CBS 6340]
Length = 665
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 180/306 (58%), Gaps = 3/306 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I PI + +G +A+D Y+WLH+ A SC+ EL G PTS+++++ +
Sbjct: 1 MGIQGLLPQLKPIQQPITLIRYDGQTLAIDGYAWLHRAAHSCAEELALGRPTSKYLEFFI 60
Query: 61 HRVNLLRH-YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
R+N+LR+ + + P L+FDG + +K + E KR + R EN RA+ G+ +Y+++
Sbjct: 61 KRLNMLRNRFNINPYLVFDGDAIMVKKDTELKRKQKRAENKERALALWKAGDKRQAYDYF 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QK VD++P +A +I+ + Q++ YIVAP+EADAQM +L V +I+EDSDL+ FGC
Sbjct: 121 QKCVDVTPEMAKCVIEYCQVQDIKYIVAPFEADAQMVYLEKKGLVHGIISEDSDLLIFGC 180
Query: 180 SRIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
++I K+ G+G+E + + + M LSGCDY +P +GL
Sbjct: 181 RKLITKLTDHGEGIEICRDDFPRLPSKFPLSQLCPEETRAMVCLSGCDYTAGIPKIGLLT 240
Query: 239 AHALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
A L+ K K+ D +IK++ + VP + E + A FQ QRVY P+ + LS I
Sbjct: 241 AMKLVRKHKTMDNIIKNIQREGKFVVPKEFLEEYQLASFAFQFQRVYCPENGMMTTLSEI 300
Query: 298 SDNIGN 303
+ + N
Sbjct: 301 PEELRN 306
>gi|254580281|ref|XP_002496126.1| ZYRO0C11110p [Zygosaccharomyces rouxii]
gi|238939017|emb|CAR27193.1| ZYRO0C11110p [Zygosaccharomyces rouxii]
Length = 610
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 181/306 (59%), Gaps = 8/306 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ ++ EG + +D Y+WLH+ A SC+ EL PT +++ + +
Sbjct: 1 MGIQGLLPQLKDIQNPVTLRRYEGQTLGIDGYAWLHRAACSCAYELAVSKPTEKYLRFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++ +LR + ++P L+FDG + +K E E+KR R+E+ A A G + E++Q
Sbjct: 61 KKLAMLRSFKIQPYLVFDGDGIGVKKETESKRREKREESRAVAKRLWESGERRNAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K D++P +A +I K QN+ Y+VAP+EADAQM +L + ++ +++EDSDL+ FGC
Sbjct: 121 KCADVTPEMAKCVIDYCKAQNIPYVVAPFEADAQMVYLEKNGFIQGILSEDSDLLIFGCR 180
Query: 181 RIIFKMDKFGQGVEF----QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
R+I K++ FG+ +E C + K + T Q + M L+GCDY +P +GL
Sbjct: 181 RLITKLNDFGECIEICRDDFCKLPYK---FALNKLTPQEIRTMVCLAGCDYTSGIPKVGL 237
Query: 237 KRAHALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
A L+ +F++ ++++ H+ + + VPP + + A FQ+QRV+ P IV L+
Sbjct: 238 VTAMKLVQRFRTLERILLHVQREGKLKVPPEFISEYELANFAFQYQRVFCPVKRKIVTLN 297
Query: 296 CISDNI 301
I ++
Sbjct: 298 EIPQDL 303
>gi|195148683|ref|XP_002015297.1| GL18496 [Drosophila persimilis]
gi|194107250|gb|EDW29293.1| GL18496 [Drosophila persimilis]
Length = 709
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 186/338 (55%), Gaps = 17/338 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ + +K++ G VAVDTY WLHKG SC+ +L +G +++ YC+
Sbjct: 1 MGITGLIPFLEKASSKLQLKDIRGSTVAVDTYCWLHKGVFSCAEKLARGEDCDQYVQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L Y +KPIL+FDG LP K E +R SR+++ RA E G + +
Sbjct: 61 KYIQMLLSYDIKPILVFDGQHLPAKALTEKRRRESRQQSKQRAAELLRLGRVEEARSQMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG
Sbjct: 121 RCVDVTHEMALRLIRECRNRNVDCIVAPYEADAQMAWLNKANIAQYIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++IFK+D G G+ + L + + MCILSGCDYL SLPG+GL +A
Sbjct: 181 KVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRRMCILSGCDYLDSLPGIGLAKAC 240
Query: 241 ALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+ K + D K+ +L S + V Y E+F KA TF+H +Y+P + L
Sbjct: 241 KFMLKTEQDDMRIALKKIPSYLNMSKLEVDDDYIENFMKAEATFKHMFIYNPLQRRMERL 300
Query: 295 SCISD---------NIGNDLD--FLAKGIAIGDLDPFT 321
+ + N G L+ LA +A+G+L+PF+
Sbjct: 301 CTLEEYETDESYCSNAGTLLEDSHLALHLALGNLNPFS 338
>gi|194758777|ref|XP_001961635.1| GF14831 [Drosophila ananassae]
gi|190615332|gb|EDV30856.1| GF14831 [Drosophila ananassae]
Length = 714
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 187/343 (54%), Gaps = 27/343 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P ++ + +K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVEKASSKLQLKDIRGTTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +L Y +KPIL+FDG LP K E +R SRK++ +A E G + +
Sbjct: 61 KYVQMLLSYDIKPILVFDGQHLPAKALTEKRRRESRKQSKEKAAELLRRGRIEEARSHMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++ +A LI+ + +N+ IVAPYEADAQM +L + E +ITEDSDL FG
Sbjct: 121 RCVDVTHDMALRLIKECRMRNIDCIVAPYEADAQMAWLNKADIAEFIITEDSDLTLFGAK 180
Query: 181 RIIFKMDKFGQGV-----EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
+IIFK+D G G+ + +M + ++ F F + MCILSGCDYL SLPG+G
Sbjct: 181 KIIFKLDLNGNGLLVEAHKLHLAMGCREENYHFDKFRR-----MCILSGCDYLDSLPGIG 235
Query: 236 LKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
L +A I K + D K+ L + V Y E+F KA TF+H +Y+P
Sbjct: 236 LAKACKFILKTEQEDMHIALKKIPSTLNMRNLEVADEYIENFLKAEATFKHMYIYNPLER 295
Query: 290 DIVHLSCISD---------NIGNDLDFLAKG--IAIGDLDPFT 321
+ L + D N G L+ + +A+G+++PF+
Sbjct: 296 RMERLCALEDFETDERYCSNAGTLLEDKDQALHLALGNINPFS 338
>gi|156843134|ref|XP_001644636.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156115283|gb|EDO16778.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 487
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 181/299 (60%), Gaps = 2/299 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+QG LP LKSI P+ + G +A+D Y+WLH+ + SC+ +L G PT +++ + +
Sbjct: 1 MGVQGFLPQLKSIQNPVSLNRYSGQTLAIDGYAWLHRASCSCAHDLVLGNPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++ +L+ YG+KP +FDG LP+K + E KR R EN AI + G S +++Q
Sbjct: 61 KKLAMLKSYGIKPYFVFDGDSLPVKKDTEVKRRNKRVENREVAIRLYNSGEVRNSMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A ++ + ++ YIVAP+EADAQM +L V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDVTPEMAKCVMDYCQIHHIDYIVAPFEADAQMVYLEKQNIVQGIISEDSDLLIFGCR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQK-NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ FG+ +E K K +++ + M LSGCDY +P +GL +A
Sbjct: 181 RLITKLNDFGECIEICKDDFNKLPKKFPLHELSEEGIKTMVCLSGCDYTNGIPRIGLVKA 240
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
L+ ++++ DK++ ++ +P + + + KAV+ F++QRV+ P +E IV L+ I
Sbjct: 241 IKLVHQYRNIDKILLSIRRDGKFQIPETFLQEYHKAVIAFEYQRVFCPISEKIVTLNDI 299
>gi|301113736|ref|XP_002998638.1| exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262111939|gb|EEY69991.1| exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 2745
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 194/340 (57%), Gaps = 27/340 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP+LKS+ +HI + G + VD WL+KGA SC +L G PT +++Y +
Sbjct: 2024 MGVTGLLPVLKSVTDQVHISKYTGKTLGVDASDWLYKGAYSCPVDLVLGRPTDAYLNYAI 2083
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARA----IECESEGNSSASY 116
+ LL+ + + PIL+FDG LP K ++ R RSR++ +A E + + + A +
Sbjct: 2084 QHIKLLQTHNITPILVFDGAPLPSKAQENANRGRSRRDWQLKAEKLLQEKKEDQDPRAVF 2143
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
+AV ++ + L+ VL++ N+++ VAPYEADAQ+ FL+ K V+ VI++DSD +P
Sbjct: 2144 SACARAVSVTNDMVMRLVAVLRRMNITFYVAPYEADAQLAFLSRQKIVDVVISQDSDCVP 2203
Query: 177 FGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
+G ++FK+ G G E + L N++LS G+T++ML C+L+GCDY S+ G+G+
Sbjct: 2204 YGVKTVLFKLSPDGWGSELKRRSLGANEELSLAGWTEEML---CVLAGCDYCASVSGVGI 2260
Query: 237 KRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A+ L++ +K+ + K S VS Y E F A+LT++HQ V+DP+ + LS
Sbjct: 2261 ITAYKLVNTYKT---PAEQQKGSAVSED--YPEQFYSAILTYRHQLVFDPRDAKLKMLSP 2315
Query: 297 ------ISDNIGNDLDFLAK---------GIAIGDLDPFT 321
I ++ L FL IA G++ P T
Sbjct: 2316 LDISKDILPHVDKGLHFLGNVELRDDVVASIAAGEIHPTT 2355
>gi|190347330|gb|EDK39579.2| hypothetical protein PGUG_03677 [Meyerozyma guilliermondii ATCC
6260]
Length = 635
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 180/303 (59%), Gaps = 2/303 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P ++ +G +AVDTY WLH+G +SC++ELC+ PT ++++ +
Sbjct: 52 MGVTGLLQHLKEIQEPSNLASYKGKTLAVDTYGWLHRGLISCAQELCQNQPTRKYVNSVI 111
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V++LRH+GV+P L+FDG LP K E +R R+E +A G+ ++++ +
Sbjct: 112 KKVDMLRHFGVEPYLVFDGAYLPTKAETAKERRIKREEAQQKADLLLKRGDRKSAWKEFM 171
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++P +A ++ L + V Y+VAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 172 KAAGVTPEMAKSIMVELDARKVKYVVAPYEADPQMVYLEKIGAVDGILSEDSDLLIFGCQ 231
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ V + K K + +T+Q L + +L+GCDY + +PG+GLK A
Sbjct: 232 RLITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVAMLAGCDYTKGIPGIGLKTA 291
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K + V+ L + VP + + A L FQ Q+V+DP + + L+
Sbjct: 292 FTLVWKHGDLNSVLSALD-AEGKVPDTFADEVFNADLAFQFQKVFDPFEKSLKTLNEYPS 350
Query: 300 NIG 302
++G
Sbjct: 351 DLG 353
>gi|344301703|gb|EGW32008.1| hypothetical protein SPAPADRAFT_50611 [Spathaspora passalidarum
NRRL Y-27907]
Length = 638
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 200/351 (56%), Gaps = 7/351 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP LK I P ++ G +A+DTY WLH+ +SC++ELC +PT ++I +
Sbjct: 1 MGVTGLLPHLKEIQTPGTLERYRGTTLAIDTYGWLHRSVVSCAQELCMDIPTRKYITSIL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++++L+++GV P +FDG LP K E +R+ RK+ +A +G + +++ +
Sbjct: 61 NKIDMLKYFGVTPYFVFDGAPLPTKSETNLERSTKRKQARKQAEMYMKQGKTKLAFKEFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ ++A ++ L + Y+VAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 121 KAASVTHAMAKSIMVELDNLGIKYVVAPYEADPQMVYLEKIGVVDGILSEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K+ G VE K + + + +T + L + +LSGCDY + + G+G+K A
Sbjct: 181 RLITKLKDDGSCVEINRDDFGKVRSIPYLSSYTPEQLRLVAMLSGCDYTKGVNGIGIKSA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K+ + DK+I L+ VP + + A L FQ+Q+V+ P+ + ++ L+ D
Sbjct: 241 FTLVRKYNNLDKIIVALQSDGKQVPEGFRDEVDSANLAFQYQKVFHPQLQKLMTLNEYPD 300
Query: 300 NIGNDLDFLAKGIAIG---DLDPFTQLPFQEVSDNSH-LVVGQNSHLKNFK 346
+ +DLD + G D + +T L ++ N+H L+V + L + K
Sbjct: 301 S--HDLDMEKVELCCGKTFDDETYTNLCNGVINPNTHELLVSREQSLTSLK 349
>gi|428168266|gb|EKX37213.1| hypothetical protein GUITHDRAFT_40221, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 181/305 (59%), Gaps = 5/305 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL + + M H+KE+ G V D ++WLHK A C+ ++ G PT ++I+YCM
Sbjct: 1 MGIKGLRQAVAAHMREGHVKEIAGKTVVCDGHAWLHKAAFGCAFDIAMGKPTDKYIEYCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
H VN+L+ YGV PI++ DG LP K ++R R+ A +E G+ S + + Q
Sbjct: 61 HLVNMLKFYGVTPIIVLDGRSLPGKARVNSERNARRESQRALGMELLRRGDRSGALKCLQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++ ++ +AH L+ + V+ IV+PYEADAQM+++ +AVI+EDSD++PFG
Sbjct: 121 QSIHVTAEMAHAFHARLQSEKVTCIVSPYEADAQMSYMVRKGMAQAVISEDSDMVPFGVD 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKN--KDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
I++KMD G F+ L + K + + + MCIL+GCDYLQS+PG+G+++
Sbjct: 181 MILYKMDTSGSCCIFENKPLGEGNKKSMDVSKLSGDARIHMCILAGCDYLQSIPGIGIQK 240
Query: 239 AHALISKFKSYDKVIKHLKYS---TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
A+ LI + K I+ L+ VP YE++F +A F+HQ VYD + +V+++
Sbjct: 241 AYGLIREHGDGKKAIEALRKHPKMKEKVPDGYEDAFERAEKLFKHQWVYDMEERKLVNMT 300
Query: 296 CISDN 300
+ ++
Sbjct: 301 QVPED 305
>gi|150866513|ref|XP_001386143.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
gi|149387769|gb|ABN68114.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
Length = 676
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 177/309 (57%), Gaps = 1/309 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP LK I P +++ G +A+DTY WLH+ +SC+ ELC PT ++I +
Sbjct: 1 MGVTGLLPCLKEIQNPGTLEQYRGKTLAIDTYGWLHRALISCAEELCLERPTRKYITSIL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV++LRH+GV+P +FDG LP K E N+R R+E +A E G S +++ Y
Sbjct: 61 KRVDMLRHFGVEPYFVFDGAALPTKAETANERRVKRQEARKKAEEYSKAGKRSLAWKEYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L + + YIVAPYEAD QM +L V+ +++EDSDL+ FGC+
Sbjct: 121 KAASVTSQMAKSVMVELDARGIKYIVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K+ G VE K K + + F+++ L + +LSGCDY + G+G+K A
Sbjct: 181 RLITKLKDDGTLVEICRQDFHKVKSIPYLSKFSQEQLRLIAMLSGCDYTNGIQGIGIKTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K ++++ L+ + + + +A L FQ Q+V++PK + + L +
Sbjct: 241 FNLVQKHAKLERIVAVLRAEGKPIDEGFHDELHRANLAFQFQKVFNPKLQQLKTLHDYPE 300
Query: 300 NIGNDLDFL 308
++ D + L
Sbjct: 301 DLELDYEVL 309
>gi|146416653|ref|XP_001484296.1| hypothetical protein PGUG_03677 [Meyerozyma guilliermondii ATCC
6260]
Length = 635
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 179/303 (59%), Gaps = 2/303 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P ++ +G +AVDTY WLH+G +SC++ELC+ PT ++++ +
Sbjct: 52 MGVTGLLQHLKEIQEPSNLASYKGKTLAVDTYGWLHRGLISCAQELCQNQPTRKYVNSVI 111
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V++LRH+GV+P L+FDG LP K E +R R+E +A G+ +++ +
Sbjct: 112 KKVDMLRHFGVEPYLVFDGAYLPTKAETAKERRIKREEAQQKADLLLKRGDRKLAWKEFM 171
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++P +A ++ L + V Y+VAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 172 KAAGVTPEMAKSIMVELDARKVKYVVAPYEADPQMVYLEKIGAVDGILSEDSDLLIFGCQ 231
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ V + K K + +T+Q L + +L+GCDY + +PG+GLK A
Sbjct: 232 RLITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVAMLAGCDYTKGIPGIGLKTA 291
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K + V+ L + VP + + A L FQ Q+V+DP + + L+
Sbjct: 292 FTLVWKHGDLNSVLSALD-AEGKVPDTFADEVFNADLAFQFQKVFDPFEKSLKTLNEYPS 350
Query: 300 NIG 302
++G
Sbjct: 351 DLG 353
>gi|448531667|ref|XP_003870300.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis Co 90-125]
gi|380354654|emb|CCG24170.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis]
Length = 717
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 177/309 (57%), Gaps = 1/309 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P ++ G +A+DTY WLH+ +SC+ +LC G PT ++I Y +
Sbjct: 1 MGVNGLLQHLKEIQDPCSLERYRGKTLAIDTYGWLHRALVSCAEDLCLGRPTRKYITYIL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+R+ +L+++G+ P +FDG L K E KR SR E A + + G +Y+ Y
Sbjct: 61 NRIQMLQYFGITPFFVFDGASLSTKQETNLKRRESRSEAKKLAEKYAASGRLQFAYKEYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L N+ Y+VAPYEAD QM +L V+ +++EDSDL+ FGC+
Sbjct: 121 KAAYVTSQMAKSIMCELDVMNIRYVVAPYEADPQMVYLEKIGIVDGILSEDSDLLIFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+ VE K + + + +T + L + +LSGCDY + +PG+GLK A
Sbjct: 181 KLITKLKDDSSCVEINRDDFNKVRQIPYLASYTSEQLRLVAMLSGCDYTKGIPGVGLKSA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ ++ + KV L+ + +P +E+ KA L FQ Q+V+DP+ + + L+ +
Sbjct: 241 FQMVRRYHTLHKVTIALRSTGKKIPVDFEDEVLKANLAFQFQKVFDPRNQSLTTLNEVPQ 300
Query: 300 NIGNDLDFL 308
+I +D L
Sbjct: 301 SISEQVDLL 309
>gi|225554873|gb|EEH03167.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 773
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 198/360 (55%), Gaps = 24/360 (6%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
M+RV +L ++GV P L+FDG LP K E+ RA+ R+E+ +E G + +++
Sbjct: 1 MNRVRMLLYFGVTPYLVFDGDNLPSKAGTESARAQRREESKKIGLELYRSGRVAEAHQEL 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QKAVD++P +A +I+ LK+ + YIVAPYEADAQ+ +L + +I+EDSD++ FG
Sbjct: 61 QKAVDVTPYMARLMIEELKKMKIQYIVAPYEADAQLVYLEKHGIINGIISEDSDMLVFGA 120
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R++ K+DK G VE + +D+S G+T MCILSGCDYL +LP MGLK A
Sbjct: 121 KRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 180
Query: 240 HALISKFKSYDKVIKHLKY--STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
+ + K+K+ +K++K L++ + + VPP Y E+F KA LTF +Q V+ P+ +V LS +
Sbjct: 181 YRNVRKYKTIEKILKMLQFEGNGIRVPPQYLENFKKAELTFLYQLVFCPRNRKLVTLSPL 240
Query: 298 SDN--------IGNDLD-FLAKGIAIGDLDPFTQLPFQ---EVSDNSHLVVGQNSHLKNF 345
+G D++ +A G+A GDLDP T+ P + S L + + L
Sbjct: 241 PTGAKLDSMPFVGTDIEPDMAIGVACGDLDPMTKEPITLKPSYPERSRLTISRRQTL--- 297
Query: 346 KPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSS 405
P K P+ K+ + PN +P SP + EA+ S +SS
Sbjct: 298 -PAMSDLKPSKPIDTFFTPKRVPLGELDPNSLTP------SPSQQRLLEANARRSWVASS 350
>gi|302498525|ref|XP_003011260.1| exonuclease, putative [Arthroderma benhamiae CBS 112371]
gi|291174809|gb|EFE30620.1| exonuclease, putative [Arthroderma benhamiae CBS 112371]
Length = 661
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 186/339 (54%), Gaps = 39/339 (11%)
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L+HYGV P ++FDGG+LP K E RA R+E+ E G ++ +Y+ +QKAVD
Sbjct: 1 MLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQKAVD 60
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P +A LI+ LK+ + Y+VAPYEAD Q+ +L + +I+EDSD++ FG R++
Sbjct: 61 VTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRLLS 120
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+DK G +E +D+S G+T + MCILSGCDYL ++P MGLK A+ I
Sbjct: 121 KLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKMGLKTAYRSIR 180
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD-NIG 302
K K+ D+V++ +++ + VPP Y ++F +A LTF HQRV+ P + +V L+ + D G
Sbjct: 181 KHKTVDRVVRMVQFEGSNRVPPGYLDNFKRAELTFLHQRVFCPIAKTLVMLNPLPDGGNG 240
Query: 303 NDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESER--- 351
D+ ++ A GIA GDLDP T+ P + LK PE ER
Sbjct: 241 EDMPYIGTLLEPHVAIGIACGDLDPITKEPIE---------------LKRLYPERERLVR 285
Query: 352 -----------KKLDLPVQKNLLTKKFTTPRISPNHFSP 379
KK +Q+ K+ + PN +P
Sbjct: 286 TGRQSITSSDEKKPVREIQEFFTPKRIPLSELDPNSMTP 324
>gi|366992229|ref|XP_003675880.1| hypothetical protein NCAS_0C05260 [Naumovozyma castellii CBS 4309]
gi|342301745|emb|CCC69516.1| hypothetical protein NCAS_0C05260 [Naumovozyma castellii CBS 4309]
Length = 412
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 178/306 (58%), Gaps = 2/306 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP LK+I + +K+ G + +D YSWLHK A SC+ EL PT +++ Y +
Sbjct: 1 MGVAGLLPHLKTIQKHVTLKKYAGMTLGIDAYSWLHKAACSCAYELAMDKPTEKYLQYFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ NL++ +KP LIFDG + +K E E+ R RK N + G A+ EF+Q
Sbjct: 61 RKFNLMKKLNIKPYLIFDGDAILVKGEVESSRLNKRKTNKLMGEKLWRIGERKAATEFFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+V+I+ +A +I ++ ++ Y+VAP+EAD+QM +L + QV+ +I+EDSDLI FG
Sbjct: 121 KSVNITTQMAKHIINYCRENSIQYVVAPFEADSQMVYLEKTVQVQGIISEDSDLIVFGSK 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K+++FG+ +E C FG + + + LSGCDY + +GL A
Sbjct: 181 RLITKLNEFGECIEIASCDFGDLTGKFPFGELSMDQIRMLVCLSGCDYTVGIWKIGLVTA 240
Query: 240 HALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ +F + D ++ H+K S S+ + + + A +FQ+QRV+DPK IV L+ I
Sbjct: 241 IKLVRQFDNMDDIVNHIKESGKYSLNCNFLQEYKYANYSFQYQRVFDPKENRIVTLNRIP 300
Query: 299 DNIGND 304
+ ND
Sbjct: 301 TELKND 306
>gi|367009066|ref|XP_003679034.1| hypothetical protein TDEL_0A04910 [Torulaspora delbrueckii]
gi|359746691|emb|CCE89823.1| hypothetical protein TDEL_0A04910 [Torulaspora delbrueckii]
Length = 593
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 177/305 (58%), Gaps = 2/305 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LKSI P+ + EG + +D Y+WLH+ A C+ EL G PT++++ + +
Sbjct: 1 MGIQGLLPQLKSIQNPVSLVRYEGQTLGIDGYAWLHRAACCCAYELVTGQPTAKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++++L+ + ++P IFDG + +K + E KR R EN + A + G S + +++Q
Sbjct: 61 RKISMLKSFKIEPFFIFDGDAIGVKKDTEVKRREKRAENKSIAEKLWKLGERSNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A +I K + YIVAP+EADAQM +L + +++EDSDL+ FGC
Sbjct: 121 KCVDVTPEMAKCIIDYCKTNRIQYIVAPFEADAQMVYLEKQNLIHGILSEDSDLLIFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I KM+ FG+ +E + Q + T + + M LSGCDY +P +GL A
Sbjct: 181 KLITKMNDFGECIEICRDDFDQLPRKFPLNQLTDEEIRIMVCLSGCDYTSGIPKVGLITA 240
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ +F++ D+V+ ++ VPP +++ A FQ QRV+ P IV L+ I
Sbjct: 241 MKLVRQFRTLDRVLLSIQRDGKYKVPPNFDQETILANFAFQFQRVFCPIRRKIVSLTEIP 300
Query: 299 DNIGN 303
++ N
Sbjct: 301 PHLLN 305
>gi|260943253|ref|XP_002615925.1| hypothetical protein CLUG_04807 [Clavispora lusitaniae ATCC 42720]
gi|238851215|gb|EEQ40679.1| hypothetical protein CLUG_04807 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 195/364 (53%), Gaps = 26/364 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P + G +AVDTY WLH+G +SC++ELCK PT+ ++ M
Sbjct: 1 MGVTGLLQQLKEIQEPTTLDRYRGQTLAVDTYGWLHRGLISCAQELCKDAPTASYVTSVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V++LRH+GV+P L+FDG LP K +R R+ A E +G+ +++ Y
Sbjct: 61 KKVDMLRHFGVEPYLVFDGAALPTKEGTLIERREKRERAREAAAALEKKGDRRGAWKEYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++P +A ++ L ++ V Y+VAPYEAD QM +L V+A+++EDSDL+ FGC
Sbjct: 121 KAAAVTPEMAKSVMVELDRRRVKYVVAPYEADPQMVYLEQIGAVDAILSEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLS-FGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R++ K+ G VE + + + + +T + ILSGCDY + +PG+GLK A
Sbjct: 181 RLVTKLSDSGGCVEINRARFSQVRAVPRLADYTPAQWRAVAILSGCDYTKGVPGVGLKTA 240
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
A +S+ S K++ L Y +VPP + + +A L FQ Q+V+DP+ + L+
Sbjct: 241 FAAVSRTPSLHKIV--LSYIEKGTVPPSFLQEAVRADLAFQFQKVFDPRARALRTLNEYP 298
Query: 299 DNIGNDLDFLAK------------GIAIGDLDPFTQLPFQEVSDNSHLVV--------GQ 338
+ + + L GI G + PFT VS +LV+ GQ
Sbjct: 299 PDFEVETEILEAVCGRTLEEKIHVGICTGRIHPFTHTVL--VSREQNLVLMKSRSVVDGQ 356
Query: 339 NSHL 342
H+
Sbjct: 357 MGHM 360
>gi|403214255|emb|CCK68756.1| hypothetical protein KNAG_0B03150 [Kazachstania naganishii CBS
8797]
Length = 719
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 177/303 (58%), Gaps = 2/303 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ + EG +A+D Y+WLH+ A SC+ EL PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVTLHRYEGQTLAIDGYAWLHRAACSCACELAMNKPTDKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R +L+ + ++P L+FDG +P+K + E KR R E+ A A G S + +F+Q
Sbjct: 61 KRFAMLKTFNIRPFLVFDGANIPVKKDTETKRREKRVESKAIAERLWKSGEKSNAMDFFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I + ++YIVAPYEAD+QM +L V+ +++EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCVIDYCRNNALAYIVAPYEADSQMVYLEKMGMVDGILSEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQK-NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K++ +G+ +E + +K + G ++ + LSGCDY + +G+ A
Sbjct: 181 KLITKLNDYGECIEIDSADFKKLPRKFPLGQLSQANFRTLVCLSGCDYTNGIAKVGILTA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ + S +K++ + + +SVP + + + A FQ QRV+ P + IV L+ I
Sbjct: 241 MKLVQRLNSMEKILLQIQREGKLSVPSNFLDEYELANYAFQFQRVFCPMSGKIVPLNEIP 300
Query: 299 DNI 301
D++
Sbjct: 301 DSL 303
>gi|149237665|ref|XP_001524709.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451306|gb|EDK45562.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 800
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 188/338 (55%), Gaps = 13/338 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLPLLKSI P ++ G +A+DTY WLH+ +SC+ +LC G PT R++ Y
Sbjct: 1 MGVNGLLPLLKSIHDPCSLERYRGKTLAIDTYGWLHRAVVSCAEDLCLGRPTRRYVTYVR 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++ +L+ + + P +FDG L K + ++R +SRKE LA A + G S + + Y
Sbjct: 61 NKIAMLQDFQITPYFVFDGASLRTKAQTNDERRKSRKEALALAQQYAKLGRSDLAGKQYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L + Y+VAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 121 KAACVTSQMAKLIMCELDLLKIKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+ VE + ++S+ G F++ L +LSGCDY + + G+GLK +
Sbjct: 181 KLITKLKDDSTCVEIDRHNFKNVANMSYLGNFSESQLRLAAMLSGCDYTKGVQGIGLKSS 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K+ KVI +K S VP E+ +A L FQ Q+V+DP+++ + L+ + +
Sbjct: 241 VQLVRKYIYLQKVILAIKASGKMVPDNLEDDIYRADLAFQFQKVFDPRSQKLTTLNELPE 300
Query: 300 NIGNDL------------DFLAKGIAIGDLDPFTQLPF 325
+ D+ D L + + G +DP T P
Sbjct: 301 ELEVDVEILEMYCGRCIDDRLIQHVCNGVIDPNTHEPL 338
>gi|255080028|ref|XP_002503594.1| predicted protein [Micromonas sp. RCC299]
gi|226518861|gb|ACO64852.1| predicted protein [Micromonas sp. RCC299]
Length = 309
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 184/315 (58%), Gaps = 21/315 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTS 53
MGI+GL +L+ + + + + G AVD YSWLHKGA SC+ EL + +
Sbjct: 1 MGIKGLPEVLRPWLKSVQVGKYAGKRAAVDAYSWLHKGAYSCALELGTNNRWWIRQRRDA 60
Query: 54 RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
++ YC+HR +LRHYG+ P+++FDG LP K +E +R R E + + E + +
Sbjct: 61 PYVRYCIHRAQMLRHYGITPVIVFDGDRLPAKGGEEKERRERRAECMRKGHERLAARDRD 120
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV------SKQVEAV 167
+ + + +DI+P++AHELI LK++ +IVAPYEADAQ+ LA V+ V
Sbjct: 121 GATFMFAQGLDITPAMAHELIAALKREGFEFIVAPYEADAQIAALAQLGAKGDPGGVDIV 180
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TEDSDL+ +GC ++FK+DK G L+F G+ + LE+C+LSGCD+
Sbjct: 181 FTEDSDLVAYGCPLVLFKLDKSKAGG-------GAKGPLNFIGWKHEQFLELCVLSGCDF 233
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDP 286
L ++ G+G+K+AHAL++K +S V+ L + VPP Y++ F +A TF+H RVYDP
Sbjct: 234 LPNIRGIGIKKAHALVAKHRSVAAVLAVLHGDKKIHVPPGYDDDFRRAFWTFRHARVYDP 293
Query: 287 KTEDIVHLSCISDNI 301
+ L+ + + +
Sbjct: 294 ALRRLRPLNPMPEEL 308
>gi|170030670|ref|XP_001843211.1| exonuclease [Culex quinquefasciatus]
gi|167867887|gb|EDS31270.1| exonuclease [Culex quinquefasciatus]
Length = 792
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 179/332 (53%), Gaps = 13/332 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P L+ H+++L G CVA+D+Y WLHKGA +C+ +L +G T HI YC+
Sbjct: 1 MGITGLIPFLEKASRKCHLRDLRGQCVAIDSYCWLHKGAFACAEKLVRGEATDVHIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VNLL +KPIL+FDG LP K E KR SR + RA E G + F +
Sbjct: 61 KFVNLLLANEIKPILVFDGRHLPAKAGTEAKRRESRDSSKKRAAELLRMGKVEEAKSFLR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VDI+ S+A ELI+ +++NV +VAPYEADAQ+ FL + VITEDSDL+ FGCS
Sbjct: 121 RCVDITHSMALELIKECRKRNVDCVVAPYEADAQLAFLNKKGIAQVVITEDSDLMLFGCS 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++FK+D G G+ + L FT MCILSG G+G +
Sbjct: 181 KVLFKLDLTGSGLLIEREKLAVAMGCKEEKFTFDKFRYMCILSGVIIWTRFRGLGCQ-GE 239
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
+ + + + S + V Y++SF KA TF+H VYDP L+ +
Sbjct: 240 EVCTDNGGHGYSKGAGQDSGLQVSEEYKDSFLKADATFRHMVVYDPTERKQTRLN-DPEE 298
Query: 301 IGNDL-----------DFLAKGIAIGDLDPFT 321
+G D D +A +A+G++DPF+
Sbjct: 299 VGTDPELCCNAGTFLEDKIALQLALGNVDPFS 330
>gi|366995107|ref|XP_003677317.1| hypothetical protein NCAS_0G00770 [Naumovozyma castellii CBS 4309]
gi|342303186|emb|CCC70964.1| hypothetical protein NCAS_0G00770 [Naumovozyma castellii CBS 4309]
Length = 709
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 183/317 (57%), Gaps = 4/317 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ + EG +A+D Y+WLH+ A SC+ EL PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVGLHRYEGQTLAIDGYAWLHRAACSCAYELAMEKPTQKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ ++LR + ++P L+FDG +P+K E KR R EN A A + G + +++Q
Sbjct: 61 KKFSMLRKFNIEPYLVFDGDSIPVKKGTELKRRERRVENRAIAERLWTSGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I K ++YIVAP+EAD+QM +L + V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDITPDMAKCVIDYCKVNQINYIVAPFEADSQMVYLEQTGIVQGIISEDSDLLVFGCR 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQK-NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E K + G + + LSGCDY +P +GL A
Sbjct: 181 RLITKLNDYGECIEICKDDFNKLPRKFPLGQLNMECFRTLVCLSGCDYTDGIPKVGLVTA 240
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
++ K ++ D+++ ++ + +P +++ + A FQ+QRV+ P + IV L+ I
Sbjct: 241 MKMVYKLRNMDRILLSIQRDGKLKIPTTFKDEYKLANYAFQYQRVFCPISRRIVPLNKIP 300
Query: 299 DN--IGNDLDFLAKGIA 313
+ +DL L++ I
Sbjct: 301 EEKFTADDLIILSQCIG 317
>gi|363748330|ref|XP_003644383.1| hypothetical protein Ecym_1331 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888015|gb|AET37566.1| hypothetical protein Ecym_1331 [Eremothecium cymbalariae
DBVPG#7215]
Length = 681
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 177/318 (55%), Gaps = 6/318 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LKSI P+ + +A+D Y+WLH+ A +C+ ELC GLPT +++ + +
Sbjct: 1 MGISGLLPQLKSIQQPVTLHRYRSQTLAIDGYAWLHRSAHACAVELCLGLPTDKYLQFFV 60
Query: 61 HRVNLLRH-YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
++ +LR+ YG++P L+FDG + +K E KR R+EN A AI G+ E++
Sbjct: 61 KKLTMLRNQYGIEPYLVFDGDSIQVKSGTETKRREKREENRAIAIRLWESGDRRKCVEYF 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QK VDI+P + +I Y+VAPYEAD Q+ +L S V VI+EDSDL+ FGC
Sbjct: 121 QKCVDITPEMTKVIIDYCATAGFKYLVAPYEADPQLVYLEKSGIVSGVISEDSDLLVFGC 180
Query: 180 SRIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
R+I K+++FG+ +E + G L M LSGCDY +P +GL
Sbjct: 181 RRLITKLNEFGECIEISRGDFHHLPSSFPLGKLDDSELRTMVCLSGCDYTAGIPKVGLLT 240
Query: 239 AHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
A L+ +++S DK++ ++ +P + + + A FQ+QRVY P +V L+ I
Sbjct: 241 AIKLVRQYRSMDKILMSIRREGKRKIPSEFVQEYTFADYAFQYQRVYCPVLRKLVTLNEI 300
Query: 298 SDNIGNDLDF---LAKGI 312
+ +D + KGI
Sbjct: 301 PKELRDDDQLYCCIGKGI 318
>gi|410078279|ref|XP_003956721.1| hypothetical protein KAFR_0C05950 [Kazachstania africana CBS 2517]
gi|372463305|emb|CCF57586.1| hypothetical protein KAFR_0C05950 [Kazachstania africana CBS 2517]
Length = 719
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 180/319 (56%), Gaps = 5/319 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK I P+ + EG + +D Y+WLH+ A +CS EL PT +++ + +
Sbjct: 1 MGIQGLLPQLKPIQNPVTLHRYEGQTLGIDGYAWLHRAAFACSYELVMNEPTEKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++ +L+ + ++P IFDG +P+K E KR R EN A+ + G + +F+Q
Sbjct: 61 KKIRMLKSFNIEPYFIFDGDSIPVKKNTELKRRDKRVENKEMAMRLWNAGEKRNAMDFFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VDI+P +A +I+ K N+ Y+VAP+EAD+QM +L + +I+EDSDL+ FGC
Sbjct: 121 KCVDITPEMAKCVIEYCKINNIKYVVAPFEADSQMVYLEKKGLIHGIISEDSDLLIFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQK-NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K++ +G+ +E + + K G + + + LSGCDY +P +GL A
Sbjct: 181 KLITKLNDYGECIEIRRDDFSRLPKKFPLGQLNDEQIRAVVCLSGCDYTDGIPKIGLLTA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L++++K +KVI +L + +P + + + A FQ QRV+ P + +V L+ I
Sbjct: 241 FKLVNQWKQMEKVILYLQREGKWKIPANFLKEYSLANYAFQFQRVFCPVSNRLVTLNEIP 300
Query: 299 DNI---GNDLDFLAKGIAI 314
+ +DL G AI
Sbjct: 301 KRLIDSASDLLLQCIGPAI 319
>gi|326431006|gb|EGD76576.1| hypothetical protein PTSG_07693 [Salpingoeca sp. ATCC 50818]
Length = 838
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 178/307 (57%), Gaps = 13/307 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-PTSRHIDYC 59
MG+ GL+ L++I P HI++ G V VD +WL+KG+ + EL K + T +I YC
Sbjct: 1 MGVPGLIGFLQAIHEPFHIRDFAGKTVGVDIANWLYKGSYGSALELFKDVNSTDGYIIYC 60
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
+ R+ LLR + V+P+++FDG LPMK E++ R ++E AR SEG + + +
Sbjct: 61 VQRLQLLRTFNVRPVVVFDGAPLPMKAEEKASRTERKEEIYARTAFLLSEGKEAEAAQEI 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
Q+ +D+S + H+++QV ++ N+ Y+VAPYEADAQ+ F+A V+AVITEDSDLI FG
Sbjct: 121 QRGLDVSFEMRHKMVQVCQRLNIEYVVAPYEADAQLAFMARQGLVDAVITEDSDLIAFGA 180
Query: 180 SRIIFKMDKFGQGVEF------QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL----- 228
+ ++ KMD G+G+ + S+ + LSF T + L C+LSG DYL
Sbjct: 181 ADVLLKMDSNGRGLRLRFHRLNEISIRDGKRTLSFKNMTLEQLQLCCVLSGSDYLPKHSK 240
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+ G+ LK A + + S +++ L+ S V +EE A+ F+HQ V+DP
Sbjct: 241 WHIKGISLKTACKYVLRHGSTTQLLNTLR-SKHDVASGFEEVLADAMFAFRHQIVWDPTR 299
Query: 289 EDIVHLS 295
+ HL+
Sbjct: 300 DRRCHLT 306
>gi|255732117|ref|XP_002550982.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
gi|240131268|gb|EER30828.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
Length = 678
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 175/311 (56%), Gaps = 1/311 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P ++ G +A+DTY WLH+ +SC+ ELC G PT +I Y +
Sbjct: 1 MGVHGLLQCLKDIQDPGSLERYRGKTLAIDTYGWLHRAIVSCAEELCLGKPTRNYITYVV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++N+LR++G+ P +FDG LP K E +R + R+E A + + N + + +
Sbjct: 61 NKINMLRYFGITPYFVFDGAALPTKQETNKERQKRRQEAKELAEKYLAANNPQLAGKQFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L + YIVAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 121 KAAYVTSQMAKSIMSELDIMGIKYIVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+ G E K + + + + L + +LSGCDY + +PG+GL +A
Sbjct: 181 KLITKLKDDGSCYEINRENFGKVRQIPYLNQLSNDQLRLVAMLSGCDYTKGIPGIGLTKA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L K + +K++ L+ + S PP + + A L FQ Q+V+DP+T+++ L+ +
Sbjct: 241 FQLTRKHNNLEKILIALRSTGKSAPPNFRDEVELANLAFQFQKVFDPRTQELTTLNEYPE 300
Query: 300 NIGNDLDFLAK 310
+ D + L +
Sbjct: 301 GVEFDQETLER 311
>gi|365987630|ref|XP_003670646.1| hypothetical protein NDAI_0F00840 [Naumovozyma dairenensis CBS 421]
gi|343769417|emb|CCD25403.1| hypothetical protein NDAI_0F00840 [Naumovozyma dairenensis CBS 421]
Length = 723
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 176/304 (57%), Gaps = 2/304 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQG LP LK I P+ + EG +A+D Y+WLH+ + SC+ EL PT++++ + +
Sbjct: 1 MGIQGFLPQLKPIQNPVTLHRYEGQTLAIDGYAWLHRASCSCAYELVMNKPTAKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++++L+ Y ++P L+FDG +P+K E KR R EN A + G + +++Q
Sbjct: 61 KKISMLKRYNIEPYLVFDGDSVPVKKGTELKRREKRTENKTIAERLWNSGEKKNAMDYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD++P +A +I K ++ YIVAP+EAD QM +L +V+ +I+EDSDL+ FGC
Sbjct: 121 KCVDVTPEMAKCVIDYCKTNDIKYIVAPFEADPQMVYLEKQNEVQGIISEDSDLLIFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+I K++ +G+ +E + + + G + L + LSGCDY + +GL A
Sbjct: 181 RLITKLNDYGECIEICRDDFTRLPRKFPLGQLDSEGLRTLVCLSGCDYTDGIARIGLVTA 240
Query: 240 HALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
L+ ++K D++I + + V + E + KA FQ+QRV+ P+ + IV L+ I
Sbjct: 241 IKLVQRYKKMDRIILGIQREGKFKVCAEFIEEYRKADYAFQYQRVFCPQQKKIVSLNEIP 300
Query: 299 DNIG 302
++
Sbjct: 301 KDLN 304
>gi|302418566|ref|XP_003007114.1| exodeoxyribonuclease [Verticillium albo-atrum VaMs.102]
gi|261354716|gb|EEY17144.1| exodeoxyribonuclease [Verticillium albo-atrum VaMs.102]
Length = 273
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 154/238 (64%)
Query: 21 ELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGG 80
+L G + VD Y WLH+GA++C+ EL +G PT +++D+ MHRV +LRH+GV P L+FDG
Sbjct: 29 KLAGETLGVDAYGWLHRGAIACALELAQGKPTRKYVDFAMHRVRMLRHFGVTPYLVFDGD 88
Query: 81 LLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQ 140
LP K E RA+ R ++ +E G +S ++ +QK++D++P +A LI LK+
Sbjct: 89 FLPSKAMTEGSRAKRRDDSKKLGMELLKAGKNSQAFAEFQKSIDVTPEMARNLIDELKKI 148
Query: 141 NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSML 200
+V Y+VAPYEAD+Q+ +L + +++EDSDL+ FGC R++ K+D++G +E
Sbjct: 149 HVEYVVAPYEADSQLVYLERQGIIGGILSEDSDLLVFGCKRLLTKLDQYGNCIEINRRDF 208
Query: 201 QKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKY 258
+++S G+T M ILSGCDYL + MGLK A+ ++ + K+ +++++ +++
Sbjct: 209 AACREVSLTGWTDAEFRRMAILSGCDYLAGVSNMGLKTAYRMVRQHKTPERLVRMMQF 266
>gi|67609355|ref|XP_666944.1| XPG (rad-related) exonuclease [Cryptosporidium hominis TU502]
gi|54658021|gb|EAL36714.1| XPG (rad-related) exonuclease [Cryptosporidium hominis]
Length = 482
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 182/301 (60%), Gaps = 6/301 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP + +I I I +G VA+DTY WLH+ A +C+ + G PT HI+YC+
Sbjct: 1 MGIQGLLPNVDNISIKSKIDSFKGRRVAIDTYGWLHRSAANCAESIVLGKPTRVHINYCI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY- 119
++ L+ G+ P+ +FDG LPMK E +R++ R + I +SE S +SY
Sbjct: 61 EKIRTLQGKGLIPVCVFDGATLPMKRVTEEERSKRRSDAKREIIRLKSEKKSYSSYNMRS 120
Query: 120 --QKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
QKA+DI+P+IAH++++VL+ + + IVAPYEADAQ+++L+ K ++AVITEDSD++
Sbjct: 121 LCQKALDITPNIAHQVLEVLRDEYKIECIVAPYEADAQLSYLSRIKYIDAVITEDSDMLV 180
Query: 177 FGCSRIIFKM-DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
FG I+K DK G L K+ +S F+ + + CIL+GCDY++S G+G
Sbjct: 181 FGSICTIYKYDDKTGNCRVIYWKDLYKSGVISQLMFSYETFVLGCILTGCDYVKSPQGVG 240
Query: 236 LKRAHALISKFKS-YDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+K A L+ + + +++I LK +P Y A++TF HQ VYDP ++V L
Sbjct: 241 IKTAMKLVQECNADLERIILQLKDLGKDIPHSYAIDVQNAMITFFHQTVYDPIEGNMVPL 300
Query: 295 S 295
S
Sbjct: 301 S 301
>gi|66475418|ref|XP_627525.1| exonuclease i/din7p-like; xeroderma pigmentosum G N-region plus
xeroderma pigmentosum G I-region plus HhH2 domain
[Cryptosporidium parvum Iowa II]
gi|32398743|emb|CAD98703.1| XPG (rad-related) exonuclease, possible [Cryptosporidium parvum]
gi|46228981|gb|EAK89830.1| exonuclease i/din7p-like; xeroderma pigmentosum G N-region plus
xeroderma pigmentosum G I-region plus HhH2 domain
[Cryptosporidium parvum Iowa II]
Length = 482
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 182/301 (60%), Gaps = 6/301 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP + +I I I +G VA+DTY WLH+ A +C+ + G PT HI+YC+
Sbjct: 1 MGIQGLLPNVDNISIKSKIDFFKGKRVAIDTYGWLHRSAANCAESIVLGKPTRVHINYCI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY- 119
++ L+ G+ P+ +FDG LPMK E +R++ R + I +SE S +SY
Sbjct: 61 EKIRTLQGKGLIPVCVFDGATLPMKRVTEEERSKRRSDAKREIIRLKSEKKSYSSYNMRS 120
Query: 120 --QKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
QKA+DI+P+IAH++++VL+ + + IVAPYEADAQ+++L+ K ++AVITEDSD++
Sbjct: 121 LCQKALDITPNIAHQVLEVLRDEYKIECIVAPYEADAQLSYLSRIKYIDAVITEDSDMLV 180
Query: 177 FGCSRIIFKM-DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
FG I+K DK G L K+ +S F+ + + CIL+GCDY++S G+G
Sbjct: 181 FGSICTIYKYDDKTGNCRVIYWKDLYKSGVISQLMFSYETFVLGCILTGCDYVKSPQGVG 240
Query: 236 LKRAHALISKFKS-YDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+K A L+ + + +++I LK +P Y A++TF HQ VYDP ++V L
Sbjct: 241 IKTAMKLVQECNADLERIILQLKDLGKDIPQSYAIDVQNAMITFFHQTVYDPIEGNMVPL 300
Query: 295 S 295
S
Sbjct: 301 S 301
>gi|209878504|ref|XP_002140693.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556299|gb|EEA06344.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 496
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 177/301 (58%), Gaps = 6/301 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP + + I E +G VA+DTY WLH+ A +C+ +L G T HI YC+
Sbjct: 1 MGIQGLLPNIDKVSRIKKIDEFKGKRVAIDTYGWLHRSAANCAEDLVLGRSTRMHIQYCI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY- 119
RVNLL+ G+ P+ IFDG LPMK E +R R E ++ E S SYE
Sbjct: 61 DRVNLLKSKGIIPVCIFDGAPLPMKRVTEEERHMKRLEAKKELLQLEKSRKCSNSYEIRN 120
Query: 120 --QKAVDISPSIAHELIQVLK-QQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
Q+A+DI+P IAH++I+ L+ + IVAPYEADAQ+++L + V+AVITEDSD++
Sbjct: 121 LCQRALDITPDIAHQVIEELRDHHGIECIVAPYEADAQLSYLCRTGYVDAVITEDSDMLV 180
Query: 177 FGCSRIIFKM-DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
FG I+K DK G L ++ L FT +M + C L+GCDY++S G+G
Sbjct: 181 FGSPCTIYKHDDKTGICRVIYWGDLPRSGILRQNIFTYEMFVLGCTLTGCDYVKSPQGVG 240
Query: 236 LKRAHALISKFKS-YDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+K A L+ ++ +++I L+ +V Y + KA++TF HQ VYDP ++ +V L
Sbjct: 241 IKTAMKLVQEYYGDLERIILQLQTIGKNVSSDYSINVQKALITFFHQTVYDPPSQKLVPL 300
Query: 295 S 295
S
Sbjct: 301 S 301
>gi|67463104|ref|XP_648209.1| exonuclease I [Entamoeba histolytica HM-1:IMSS]
gi|56464258|gb|EAL42821.1| exonuclease I, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702558|gb|EMD43178.1| exodeoxyribonuclease, putative [Entamoeba histolytica KU27]
Length = 497
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 194/346 (56%), Gaps = 21/346 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL ++ ++ +KEL+G VA+D Y+WLH+ + SCS ELC+ +PT+ +C+
Sbjct: 1 MGITGLKGIVNTVCRKRTLKELKGIRVAIDGYAWLHRASASCSEELCENIPTNGLSSFCV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
L + + PI +FDG LP KI EN R + R ENL A ++ + + + Y
Sbjct: 61 KGALTLLNNEITPIFVFDGARLPSKITTENDRQQKRNENLKTA--RDTTISITERKKAYG 118
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AV+I P +A +IQ L + V IVAP+EAD Q+ +L V+A+I EDSDLI GC
Sbjct: 119 QAVEILPWMASAVIQSLNEIGVESIVAPFEADPQLGYLCKIGYVDAIICEDSDLIVHGCK 178
Query: 181 RIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
RI+FK +KF + V EF S L K F GFT+ ML+ C+L+GCDY +++ +G+K+A
Sbjct: 179 RILFKFNKFDETVEEFLSSDLDKT---DFKGFTRNMLVYSCVLAGCDYCKNISKVGIKKA 235
Query: 240 HALISKFKSYDKVIKHL------KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
+I S K + L + T+ Y + A+ TF + VY+P +++V+
Sbjct: 236 MKIIKSEPSISKALVKLIETHGTELDTMEKKIEYLTNVRNAIFTFNYAYVYNPVDQEVVN 295
Query: 294 LSCISDNIGNDLDFL---------AKGIAIGDLDPFTQLPFQEVSD 330
L+ + + + +D L A+ IA G +DP T PF++ D
Sbjct: 296 LNEVPEELNCMVDDLLGIKPNKQVAQEIANGTVDPDTHKPFEQFID 341
>gi|354544656|emb|CCE41382.1| hypothetical protein CPAR2_303710 [Candida parapsilosis]
Length = 717
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 175/309 (56%), Gaps = 1/309 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL LK I P ++ G +A+DTY WLH+ +SC+ +LC G PT ++I Y +
Sbjct: 1 MGVNGLLQHLKEIQEPCSLERYRGKTLAIDTYGWLHRALVSCAEDLCLGRPTRKYITYII 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++ +L+H+G+ P +FDG L K + +KR R E A + G+ +Y+ Y
Sbjct: 61 NKIQMLQHFGITPYFVFDGASLTTKQDTNSKRRVLRHEAKKLAEKYAERGHLQLAYKEYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L + Y+VAPYEAD QM +L V+ +++EDSDL+ FGC+
Sbjct: 121 KAAYVTSQMAKSIMCELDVLKIEYVVAPYEADPQMVYLEKIGIVDGILSEDSDLLIFGCN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+ VE K + + + +T + L + +LSGCDY + +PG+GLK A
Sbjct: 181 KLITKLKDDSSCVEINREDFHKVRQIPYLASYTSEQLRLVAMLSGCDYTKGVPGVGLKSA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ ++ + KV L+ +P +E+ KA L FQ Q+V+DP+ + + L+ I +
Sbjct: 241 FQMVRRYHTLHKVTIALRSMGKKIPSDFEDEVIKANLAFQFQKVFDPRIQSLATLNEIPE 300
Query: 300 NIGNDLDFL 308
+I D L
Sbjct: 301 SIFEQFDLL 309
>gi|241955293|ref|XP_002420367.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
gi|223643709|emb|CAX41445.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
Length = 715
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 169/296 (57%), Gaps = 1/296 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL +LK I P ++ G +A+DTY WLH+ +SC+ ELC G PT +++ +
Sbjct: 1 MGVNGLLQVLKEIQDPCSLERYRGQTLAIDTYGWLHRALVSCAEELCLGKPTRKYVTAIL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++ +L H+G+ P +FDG LP K E +R R+E A + + N +Y+ Y
Sbjct: 61 NKIQMLNHFGITPYFVFDGASLPTKQETNRERQLKRQEAKELAEKYIAANNQKLAYKQYM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L ++ YIVAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 121 KAAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGVVDGILSEDSDLLIFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+ G VE K K++ + + + L + +LSGCDY + +PG+GL+ A
Sbjct: 181 KLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLRTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ K+ ++ KV+ L+ +P + + A L FQ Q+V+DP + + L+
Sbjct: 241 FQLVRKYNNFTKVLIALRSMGKKIPDNFIDEVKLANLAFQFQKVFDPTNQKLTTLN 296
>gi|238882475|gb|EEQ46113.1| hypothetical protein CAWG_04457 [Candida albicans WO-1]
Length = 699
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 169/296 (57%), Gaps = 1/296 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL +L+ I P ++ G +A+DTY WLH+ +SC+ ELC G PT +I +
Sbjct: 1 MGVNGLLQILREIQDPCSLERYRGQTLAIDTYGWLHRALVSCAEELCLGKPTRNYITAIL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++ +L H+G+ P +FDG LP K E +R R+E A + + N +Y+ +
Sbjct: 61 NKIQMLNHFGITPYFVFDGASLPTKQETNRERQLKRQEAKELAEKYIAANNRKLAYKQFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L ++ YIVAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 121 KAAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGIVDGILSEDSDLLIFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+ G VE K K++ + + + L + +LSGCDY + +PG+GLK A
Sbjct: 181 KLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLKTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ K+ ++ K++ L+ +P + + A L FQ Q+V+DP ++ + L+
Sbjct: 241 FQLVRKYNNFTKIMIALRSMGKKIPDTFSDEVKLANLAFQFQKVFDPTSQKLTTLN 296
>gi|167378003|ref|XP_001734628.1| exodeoxyribonuclease [Entamoeba dispar SAW760]
gi|165903747|gb|EDR29180.1| exodeoxyribonuclease, putative [Entamoeba dispar SAW760]
Length = 497
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 192/346 (55%), Gaps = 21/346 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL ++ ++ +KEL+G VA+D Y+WLH+ + SCS ELC+ +PT+ +C+
Sbjct: 1 MGITGLKSIVNTVCRKRTLKELKGIRVAIDGYAWLHRASASCSEELCENIPTNGLSSFCV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
L + + PI +FDG LP KI EN R + R ENL A ++ N + Y
Sbjct: 61 KGALTLLNNEITPIFVFDGARLPSKITTENDRQQKRNENLKTA--RDTTINITERKRAYG 118
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AV+I P +A +IQ L + V IVAP+EAD Q+ +L V+A+I EDSDLI GC
Sbjct: 119 QAVEILPWMASAVIQSLNEIGVESIVAPFEADPQLGYLCKIGYVDAIICEDSDLIVHGCK 178
Query: 181 RIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
RI+FK +KF + V EF S L K F GFT+ ML+ C+L+GCDY +++ +G+K+A
Sbjct: 179 RILFKFNKFDETVEEFLSSDLDKT---DFKGFTRNMLVYSCVLAGCDYCKNISKVGIKKA 235
Query: 240 HALISKFKSYDKVIKHL------KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
+I S K + L + T Y + A+ TF + VY+P +++V+
Sbjct: 236 MKIIKSEPSISKALIKLIETHGAELDTKEKKIEYLTNVRNAIFTFNYAYVYNPVDQEVVN 295
Query: 294 LSCISDNIGNDLD---------FLAKGIAIGDLDPFTQLPFQEVSD 330
L+ + + + +D +A+ IA G +DP T PF++ D
Sbjct: 296 LNEVPEELSFMVDEILGIKPNKQIAQDIANGTVDPDTHKPFEQFID 341
>gi|295668435|ref|XP_002794766.1| DNA damage-inducible protein DIN7 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285459|gb|EEH41025.1| DNA damage-inducible protein DIN7 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 827
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 193/360 (53%), Gaps = 26/360 (7%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
M+RV +L H+G+ P L+FDG LP K E+ RA+ R+E+ +E G + +
Sbjct: 1 MNRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRREESKRLGLELFHAGRLFEAQQEL 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QKA+D++P +A +I+ LK+ V YIVAPYEADAQ+ +L ++ +I+EDSD++ FG
Sbjct: 61 QKAIDVTPYMARLMIEELKRVKVQYIVAPYEADAQLVYLERQGIIDGIISEDSDMLVFGA 120
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R++ K+DK G VE S +D+S G+T MCILSGCDYL +LP MGLK A
Sbjct: 121 KRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRMGLKTA 180
Query: 240 HALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ I K+K+ +K +K +++ S VPP Y E F +A TF HQ V+ P +V LS +S
Sbjct: 181 YRNIRKYKTVEKTMKMIQFEGGSRVPPQYLEDFKRAEFTFLHQLVFCPVARKLVTLSPLS 240
Query: 299 DN--------IGNDLD-FLAKGIAIGDLDPFTQLPF---QEVSDNSHLVVGQNSHLKNFK 346
+ +G D+D A GIA GDLDP T+ + S LV Q
Sbjct: 241 GDMTLESMPFVGADIDPDTAIGIACGDLDPRTKEAIVLRPSYPERSRLVRRQT------M 294
Query: 347 PESER-KKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSS 405
P S KK P+ K+ + PN +P SP + +A+ S +SS
Sbjct: 295 PASVGFKKPGTPINAYFTPKRVPLGELDPNSLTP------SPSQQRLLDANTQRSWVASS 348
>gi|302678463|ref|XP_003028914.1| hypothetical protein SCHCODRAFT_59252 [Schizophyllum commune H4-8]
gi|300102603|gb|EFI94011.1| hypothetical protein SCHCODRAFT_59252 [Schizophyllum commune H4-8]
Length = 277
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 168/291 (57%), Gaps = 31/291 (10%)
Query: 27 VAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKI 86
+ V+ Y WLH+G +CS EL G T ++IDY MH V +LRH GV+P ++FDGG LP K
Sbjct: 2 ITVNGYIWLHRGVYNCSVELATGKETQKYIDYFMHCVRMLRHNGVEPYIVFDGGPLPAKK 61
Query: 87 EQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIV 146
EN+R + +E+LARA ++G S + + ++I+ L+ +NV Y+V
Sbjct: 62 GTENERGQKWEESLARANMLAAQGKHSQARD--------------QVIKALRIENVKYVV 107
Query: 147 APYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKD- 205
APYEADAQ+ FL + V A++TEDSDL+ FGC I+FK+D QC+++ ++
Sbjct: 108 APYEADAQLAFLERTGAVHAILTEDSDLLVFGCKNILFKLD------HAQCTVVSISRSD 161
Query: 206 ---------LSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
+S G+T M ILSGCDYL S+PG+GLK A + + K+ ++ +K +
Sbjct: 162 FASVTACNGVSLVGWTDAQFRTMAILSGCDYLPSIPGIGLKTAGVYVRRHKTAEQCVKVI 221
Query: 257 -KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLD 306
+ +P Y F A F HQRVYDP ++++HL+ I DN + D
Sbjct: 222 AREGKKRIPMGYVSRFKLAEQCFLHQRVYDPARDELIHLTDIGDNWTEEAD 272
>gi|407042604|gb|EKE41429.1| exonuclease, putative [Entamoeba nuttalli P19]
Length = 497
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 192/346 (55%), Gaps = 21/346 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL ++ ++ +KEL+G VA+D Y+WLH+ + SCS ELC+ +PT+ +C+
Sbjct: 1 MGITGLKGIVNTVCRKRTLKELKGIRVAIDGYAWLHRASASCSEELCENIPTNGLSSFCV 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
L + + PI +FDG LP KI EN R + R ENL A ++ + + Y
Sbjct: 61 KGALTLLNNEITPIFVFDGARLPSKITTENDRQQKRNENLKTA--RDTTISITERKRAYG 118
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AV+I P +A +IQ L + V IVAP+EAD Q+ +L V+A+I EDSDLI GC
Sbjct: 119 QAVEILPWMASAVIQSLNEIGVESIVAPFEADPQLGYLCKIGYVDAIICEDSDLIVHGCK 178
Query: 181 RIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
RI+FK +KF + V EF S L K F GFT+ ML+ C+L+GCDY +++ +G+K+A
Sbjct: 179 RILFKFNKFDETVEEFLSSELDKT---DFKGFTRNMLVYSCVLAGCDYCKNISKVGIKKA 235
Query: 240 HALISKFKSYDKVIKHL------KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
+I S K + L + T Y + A+ TF + VY+P +++V+
Sbjct: 236 MKIIKSEPSISKALVKLIETHGTELDTKEKKIEYLTNVRNAIFTFNYAYVYNPVDQEVVN 295
Query: 294 LSCISDNIGNDLDFL---------AKGIAIGDLDPFTQLPFQEVSD 330
L+ + + + +D L A+ IA G +DP T PF++ D
Sbjct: 296 LNEVPEELSCMVDELLGIKPNKQVAQDIANGTVDPDTHKPFEQFID 341
>gi|68478167|ref|XP_716825.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
gi|68478288|ref|XP_716765.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438448|gb|EAK97778.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438510|gb|EAK97839.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
Length = 699
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 169/296 (57%), Gaps = 1/296 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLL +L+ I P ++ G +A+DTY WLH+ +SC+ ELC G PT +I +
Sbjct: 1 MGVNGLLQILREIQDPCSLERYRGQTLAIDTYGWLHRALVSCAEELCLGKPTRNYITAIL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++ +L H+G+ P +FDG LP K E +R R+E A + + N +Y+ +
Sbjct: 61 NKIQMLNHFGITPYFVFDGASLPTKQETNRERQLKRQEAKELAEKYIAANNRKLAYKQFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA ++ +A ++ L ++ YIVAPYEAD QM +L V+ +++EDSDL+ FGC
Sbjct: 121 KAAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGIVDGILSEDSDLLIFGCK 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF-GGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I K+ G VE K K++ + + + L + +LSGCDY + +PG+GLK A
Sbjct: 181 KLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLKTA 240
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
L+ K+ ++ K++ L+ +P + + A L FQ Q+V+DP ++ + L+
Sbjct: 241 FQLVRKYNNFTKIMIALRSMGKKIPDTFSDEVKLANLAFQFQKVFDPTSQKLTTLN 296
>gi|118395354|ref|XP_001030028.1| XPG I-region family protein [Tetrahymena thermophila]
gi|89284313|gb|EAR82365.1| XPG I-region family protein [Tetrahymena thermophila SB210]
Length = 822
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 174/305 (57%), Gaps = 19/305 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL LLKSI++ H+KE + VA+D Y+WLH +CS EL + T+
Sbjct: 1 MGITGLLNLLKSIVVKRHLKEYKDKTVAIDAYTWLHPAIYTCSYELANNIETT------- 53
Query: 61 HRVNLLRHYGVKPI-LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
++G+K I L+FDG LP K E KR +SR+++ A ++ +Y+ +
Sbjct: 54 -------NFGIKKIVLVFDGRQLPGKKGTEEKREKSREDSRNEAQLLLAQDKKDQAYKKF 106
Query: 120 QKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFG 178
++DI+P +A ELI+ ++ + NV IVAPYEADAQ+ +L+ V+ V +EDSDL+ FG
Sbjct: 107 ASSIDITPQMAFELIKAVEGRPNVECIVAPYEADAQLAYLSQIDYVDVVFSEDSDLLAFG 166
Query: 179 CSRIIFKM---DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
C +++FK+ D G E ++ K+++ + M L CI SGCDYL SL MG
Sbjct: 167 CKKVLFKLYKGDNKETGDEISLDNIKNCKEINMSLWNHNMFLTACIFSGCDYLPSLKKMG 226
Query: 236 LKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ A L+ +FK + K + ++ VP Y+E F A LTF+ Q VY P E+I L+
Sbjct: 227 IQTAFKLVGEFKQFKKCMLSIQQKNYDVPVDYDEKFQLAFLTFRFQYVYCPIKEEIRTLN 286
Query: 296 CISDN 300
+ N
Sbjct: 287 TYNSN 291
>gi|310796237|gb|EFQ31698.1| hypothetical protein GLRG_06673 [Glomerella graminicola M1.001]
Length = 746
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 166/273 (60%), Gaps = 10/273 (3%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
MHRV +L+H+GV P L+FDG LP K E RA+ R+++ A+E G SS + +
Sbjct: 1 MHRVRMLKHFGVTPYLVFDGDFLPSKAATEGSRAKRREDSKKSAMELLKAGKSSQAALEF 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QKA+D++P +A LI LK+ ++ Y+VAPYEADAQ+ +L + +++EDSDL+ FGC
Sbjct: 61 QKAIDVTPEMARNLIDELKKMDLPYVVAPYEADAQLVYLERQGLIAGILSEDSDLLVFGC 120
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R++ K+D++G +E +++S G+T M I SGCDYL+ + MGLK A
Sbjct: 121 KRLLTKLDQYGNCIEINRRDFCAVREVSLTGWTDTDFRRMAIFSGCDYLEGINNMGLKTA 180
Query: 240 HALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ ++ K+K+ +++++ +++ V Y F +A LTF HQRVY PK + +V L+
Sbjct: 181 YRMMRKYKTPERLVRMIQFEGKHRVSENYMSRFAQAELTFLHQRVYCPKKKQLVCLTEPE 240
Query: 299 DNIG-NDLDF--------LAKGIAIGDLDPFTQ 322
++ G D+ F LA IA+GD++P T+
Sbjct: 241 EDKGVEDMPFIGGYVEPDLATAIAVGDVNPITK 273
>gi|302308357|ref|NP_985242.2| AER387Cp [Ashbya gossypii ATCC 10895]
gi|299789416|gb|AAS53066.2| AER387Cp [Ashbya gossypii ATCC 10895]
gi|374108467|gb|AEY97374.1| FAER387Cp [Ashbya gossypii FDAG1]
Length = 655
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 170/307 (55%), Gaps = 3/307 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK I P+ + +A+D Y+WLH+ A SC+ EL G PT +++ + +
Sbjct: 1 MGIAGLLPQLKCIQQPVTLHRYRSQALAIDGYAWLHRSAHSCATELGMGQPTEKYLQFFV 60
Query: 61 HRVNLLR-HYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
R+ +LR Y ++P L+FDG + +K E KR R E+ ARAI+ +G S+E++
Sbjct: 61 KRLTILRDQYDIEPYLVFDGAGIKVKAGTEAKRHEKRAESRARAIDLWEKGERRKSFEYF 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QK VDI+P + +I Y+VAPYEAD Q+ +L S V+ +I+EDSDL+ FGC
Sbjct: 121 QKCVDITPEMTKVIIDYCIGAGFKYVVAPYEADPQLVYLEKSGLVQGIISEDSDLLVFGC 180
Query: 180 SRIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
R+I K++ +G+G E + + + L M L+GCDY + +P +GL
Sbjct: 181 RRLITKLNDYGEGFEICRDDFVHLPDKFPLNSLGESGLRTMVCLAGCDYTKGIPQVGLLT 240
Query: 239 AHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
A L+ K K+ D+++ +K VP + + + A L FQ QRVY P + L+ +
Sbjct: 241 AVKLVVKHKTMDQILLTIKREGKWKVPAEFLDEYRFADLAFQFQRVYCPLKNQLTTLNEV 300
Query: 298 SDNIGND 304
+ D
Sbjct: 301 PSTLRED 307
>gi|380483134|emb|CCF40805.1| hypothetical protein CH063_02433 [Colletotrichum higginsianum]
Length = 745
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 164/273 (60%), Gaps = 10/273 (3%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
MHRV +L+H+GV P L+FDG LP K E RA+ R+E+ AIE G S + +
Sbjct: 1 MHRVRMLKHFGVTPYLVFDGDFLPSKAATEGSRAKRREESKKSAIELLKAGKPSQAALEF 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
QKA+D++P +A LI LK+ V Y+VAPYEAD+Q+ +L + +++EDSDL+ FGC
Sbjct: 61 QKAIDVTPEMARNLIDELKKIQVPYVVAPYEADSQLVYLERQGLIGGILSEDSDLLVFGC 120
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R++ K+D++G +E +++S G+T M ILSGCDYL+ + MGLK A
Sbjct: 121 KRLLTKLDQYGNCIEINRRDFCAVREVSLTGWTDADFRHMAILSGCDYLEGISNMGLKTA 180
Query: 240 HALISKFKSYDKVIKHLKYSTV-SVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
+ +I K+K+ +++++ +++ V Y F +A LTF HQRVY PK + +V L+
Sbjct: 181 YRMIRKYKTPERLVRMIQFEGKHRVSENYMVRFAQAELTFLHQRVYCPKRKQLVCLTEPE 240
Query: 299 DNIG-NDLDF--------LAKGIAIGDLDPFTQ 322
+ G D+ F LA IA+GD++P T+
Sbjct: 241 EGKGVEDMPFIGGYVEPELATAIAVGDVNPITK 273
>gi|425781231|gb|EKV19207.1| Exonuclease, putative [Penicillium digitatum PHI26]
gi|425783409|gb|EKV21262.1| Exonuclease, putative [Penicillium digitatum Pd1]
Length = 673
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 176/298 (59%), Gaps = 19/298 (6%)
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L +GVKP L+FDG LP K E R + R+E+ +E + +G +Y+ +QKAVD
Sbjct: 1 MLLFFGVKPYLVFDGDNLPSKAGTEQDRYKRRQESKTLGLELQRKGKMPEAYQEFQKAVD 60
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P +A +LI+ LKQ NV Y+VAPYEADAQ+ +L + +I+EDSDL+ FG R+I
Sbjct: 61 VTPYMARQLIEELKQMNVQYVVAPYEADAQLVYLEQQGDIHGIISEDSDLLVFGAKRLIS 120
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D+ G+ +E + ++++ GF+ MCILSGCDYL ++P +GLK A+ +I
Sbjct: 121 KLDQHGECIEINRADFTACREVNLVGFSDPDFRNMCILSGCDYLANIPKLGLKTAYRIIR 180
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN--- 300
K ++ +K ++ L++ VP Y +F +A LTF +QRV+ K E +V L+ D+
Sbjct: 181 KHRNVEKALRMLQFDGNFRVPADYLANFKQAELTFLYQRVFCRKAEKLVTLTLPDDDVNL 240
Query: 301 -----IGNDLD-FLAKGIAIGDLDPFTQLPF---------QEVSDNSHLVVGQNSHLK 343
IG D++ +A G++ GDLDP T+ P + + L +G +S LK
Sbjct: 241 AVLPYIGADMEPQIAVGVSRGDLDPTTKEPITLKPLAANRWTLGISRRLTLGTSSELK 298
>gi|403411526|emb|CCL98226.1| predicted protein [Fibroporia radiculosa]
Length = 743
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 174/287 (60%), Gaps = 18/287 (6%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
MHRV LL+HY +KP ++FDGG LP K E+ R + R ENLARA ++G + E+Y
Sbjct: 1 MHRVRLLQHYRIKPYIVFDGGPLPAKQGTESDRKKRRDENLARANALAAQGKHGQAREYY 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
K +D++P +A++LI+ L+ ++V Y+VAPYEADAQ+ +L V+ +ITEDSDL+ FGC
Sbjct: 61 VKCIDVTPQMAYQLIKALRAESVPYVVAPYEADAQLAYLERIGIVDGIITEDSDLLVFGC 120
Query: 180 SRIIFKMDKFGQGV------EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPG 233
+++FK+D + +F + +S G++ M ILSGCDYL S+ G
Sbjct: 121 KKVLFKLDPTSATIICVSRADFASVTSGSSGGISLLGWSDVQFRSMAILSGCDYLPSIQG 180
Query: 234 MGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
+GLK AH+L+ K+K+ + VI+ L VP Y ++F KA F +QRVYDP E +V
Sbjct: 181 IGLKTAHSLLRKYKTVENVIRALNLEGKKKVPSNYLQAFRKAEKVFLYQRVYDPTQEMLV 240
Query: 293 HLSC-----ISDN-----IGNDLDF-LAKGIAIGDLDPFTQLPFQEV 328
+LS + D +G +L+ LAK +A GD P + LP +++
Sbjct: 241 YLSDPPAGELWDEETEAYVGTNLEASLAKQVAEGDACPISLLPMEDI 287
>gi|391873267|gb|EIT82320.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 682
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 168/271 (61%), Gaps = 10/271 (3%)
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L ++GV P LIFDG LP K E+ R + R+E+ +E + +G ++ +Y+ +QKAVD
Sbjct: 1 MLLYFGVTPYLIFDGDNLPSKAGTESDRHQRRQESKTLGLELQRKGRTAEAYQEFQKAVD 60
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P +A +LI LK+ NV Y+VAPYEADAQ+ +L + +I+EDSDL+ FG R++
Sbjct: 61 VTPLMARQLIDELKKMNVQYMVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAKRLLS 120
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D+ G +E + +++S G+T MCILSGCDYL ++ +GLK A+ I
Sbjct: 121 KLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTAYRCIR 180
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN--- 300
K+++ +K ++ L++ VP Y E+F +A LTF +QRV+ P+ +V L+ D+
Sbjct: 181 KYRNVEKALRMLQFEGQYHVPTNYLENFKQAELTFLYQRVFCPQAGKLVTLTAPEDDVNL 240
Query: 301 -----IGNDLDF-LAKGIAIGDLDPFTQLPF 325
IG D+D LA G+A GDLDP T+ P
Sbjct: 241 EELPYIGADVDPELAVGVARGDLDPTTKEPL 271
>gi|224014124|ref|XP_002296725.1| exonuclease 1 [Thalassiosira pseudonana CCMP1335]
gi|220968580|gb|EED86926.1| exonuclease 1 [Thalassiosira pseudonana CCMP1335]
Length = 334
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 178/304 (58%), Gaps = 14/304 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCS-RELCK---------GL 50
MG++GLLP L+SI + ++ G VAVD SWLHKG +C + L K G
Sbjct: 1 MGVKGLLPCLQSITRSVSLENYRGLTVAVDAMSWLHKGVFACDVKALAKSQRSSAARCGS 60
Query: 51 PTSRHIDYCMHRVNLLR-HYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
+ + Y +++ +L+ +G++ +L+ DG LP K E+ ++R R +A+ E+
Sbjct: 61 AEMKCVQYAINKAQMLQSKFGMEILLVIDGDALPSKKEENSQRRAERDSAFEKAMTAEAS 120
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G+S A+ +Y ++ ++ I +EL++ K +++IVAPYEADAQM LA + V+ VIT
Sbjct: 121 GDSRAARRYYAQSCSVTHKIRYELMKACKLVGIAFIVAPYEADAQMARLAHTGVVDLVIT 180
Query: 170 EDSDLIPFGCSRIIFKMD-KFGQGVEFQCSM-LQKNKDLSFGGFTKQMLLEMCILSGCDY 227
EDSD++ +GC R FK+D QG E Q L +N+ LSF +T M + MCI+SGCDY
Sbjct: 181 EDSDILVYGCPRACFKIDFDTCQGQEIQLMKNLGENESLSFKNWTHDMFVFMCIISGCDY 240
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
+ LPG+G+K AH ++ ++ K+ L+ +P +EE F A TF+HQRV+ P
Sbjct: 241 CKGLPGIGIKLAHKIVRVHRTPSKIFSALR-GAGRMPTDFEEKFWIAFRTFRHQRVFCPS 299
Query: 288 TEDI 291
+ I
Sbjct: 300 RQQI 303
>gi|145354983|ref|XP_001421753.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581991|gb|ABP00047.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 333
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 186/335 (55%), Gaps = 29/335 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-GCCVAVDTYSWLHKGALSCSRELCKGL--------- 50
MGI+GL +L+ +H+ E G AVD YSWLHKGA C L G
Sbjct: 1 MGIKGLPAVLEPYCERVHVGEYAPGTRCAVDAYSWLHKGAFGCVDALAPGGDRAWERRPG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ ++ Y +HR N+LRH+G++P+++FDG P K +E R R L R + G
Sbjct: 61 ATAPYVKYAVHRANMLRHHGIEPVIVFDGDRAPAKRGEERARRERRAALLERGERARAAG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ----VEA 166
+ ++ + A+D++P +A ELI LK++ ++VAPYEADA + LA++ + V+
Sbjct: 121 DKEGAFRAFSGAIDVTPEMARELIVALKREKFEFVVAPYEADATIASLALTAKERGGVDL 180
Query: 167 VITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNK-------DLSFGGFTKQMLLEM 219
V TEDSDL+ +GC R++FK++K G E + L NK L F G+ ++ L +
Sbjct: 181 VFTEDSDLVAYGCPRVVFKLEKSGDAKELR---LATNKPKSKGPPPLDFTGWDYELFLSL 237
Query: 220 CILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS---VPPFYEESFGKAVL 276
C+LSGCD+L ++ G+G+K+ + +++K + D V L+ + + YE + KA +
Sbjct: 238 CVLSGCDFLDNIRGLGIKKMYNILNKHRCVDAVFAELRANEKIKDLIAEGYEVEWRKARM 297
Query: 277 TFQHQRVYDPKTEDIVHLSCISDN--IGNDLDFLA 309
F+H V+DP + HL+ + ++ NDL FL
Sbjct: 298 IFKHALVWDPHAGALRHLTPVPEHCEFANDLSFLG 332
>gi|294925837|ref|XP_002779016.1| Exodeoxyribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239887862|gb|EER10811.1| Exodeoxyribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 329
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 186/313 (59%), Gaps = 15/313 (4%)
Query: 1 MGIQGLLPLLKSIMIPI--HIKELEGCCVAVDTYSWLHKG--ALSCSRELCKGLPTSRHI 56
MGI GLL L+ + PI + E +AVDTY WLH+G A + + ++ G PTS H+
Sbjct: 1 MGINGLLKSLEQLQRPICQDLSEYRDKRIAVDTYVWLHRGLQAGNAAMDVVTGKPTSLHL 60
Query: 57 DYCMHRVNLLRHYGV-KPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSAS 115
+YC+ R+ +L GV + +L+FDG LP K+ E++R + R+E +E GN +A+
Sbjct: 61 NYCVRRLEVLLSAGVAEVVLVFDGCPLPAKLGVEDERQKRRQEARELGLEYRKAGNHAAA 120
Query: 116 YEFYQKAVDISPSIAHELIQVLKQQ----NVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + +A D++P +A ELI +++ + V +I+APYEADAQ+ +LA++ V+AVI+ED
Sbjct: 121 RKMFTRAADVTPDMAAELISLIRGRKFGPRVRWIIAPYEADAQLAYLALNGLVDAVISED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL--SFGGFTKQMLLEMCILSGCDYLQ 229
SDL+PFGC +I+K+D C + N D + F + L C+L+GCDYL
Sbjct: 181 SDLLPFGCPHVIYKLDLVAGSGPVVC---EGNPDFLRTLISFPQDSFLHYCVLAGCDYLP 237
Query: 230 SLPGMGLKRAHALISK-FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
S+ GMG K+A+ + + S +++ + + + P Y + F +A+LTF+HQ V+ P +
Sbjct: 238 SVTGMGPKKAYGFVLRGGPSISRIMNLAQIAGLEFPEGYADMFERALLTFRHQTVWCPSS 297
Query: 289 EDIVHLSCISDNI 301
+ L + +++
Sbjct: 298 RRLRPLLDVDEDM 310
>gi|119590510|gb|EAW70104.1| exonuclease 1, isoform CRA_b [Homo sapiens]
Length = 763
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 184/344 (53%), Gaps = 58/344 (16%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT R
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRR----- 55
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ NL + + EG S + E +
Sbjct: 56 -----------------------------------RQANLLKGKQLLREGKVSEARECFT 80
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 81 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 140
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 141 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 199
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y F +A TF +Q V+DP ++ L+
Sbjct: 200 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLN 259
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 260 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 300
>gi|358334576|dbj|GAA32605.2| exonuclease 1 [Clonorchis sinensis]
Length = 996
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 152/259 (58%), Gaps = 16/259 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK P++IKE G VAVD Y WLHK + +C+ +L G PT +++ Y +
Sbjct: 1 MGISGLLPFLKKASCPVNIKEFNGYTVAVDAYCWLHKSSYACAMDLALGNPTDQYVRYTL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L +KPIL+FDG LP K + E KR S++ +A E +GN A+ E +Q
Sbjct: 61 KYLEMLLTCNIKPILVFDGASLPSKADTELKRKESKESYRKKAAEYLLQGNREAAQECFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V ++ +AH++++ + V IVAPYEADAQ+ +L + + VITEDSDL+ FGC
Sbjct: 121 RSVFVTSKMAHDVLKAARNLGVDCIVAPYEADAQLAYLNRAGYADLVITEDSDLLLFGCR 180
Query: 181 RIIFKMDKFGQGV---------EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
++IFK+D G GV E C M + N+ FT L M ILSGCDY +
Sbjct: 181 QVIFKLDLTGAGVLVAVTAGIGELCCGM-RPNQ------FTDSTLRYMGILSGCDYFSGI 233
Query: 232 PGMGLKRAHALISKFKSYD 250
PG+GL A ++ + + D
Sbjct: 234 PGIGLATAAKILRQTRLSD 252
>gi|123494006|ref|XP_001326419.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121909333|gb|EAY14196.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 414
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 177/339 (52%), Gaps = 17/339 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP+++ +H+ E +G +A+D + WLHK A R++ K T + Y M
Sbjct: 1 MGINGLLPIIQPAGRRVHLTEFKGKRIAIDGFVWLHKAAFKYPRQVIKDPSTKLLLPYLM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+VN + + G+KPI+IFDG LP K KR + R++ L +A E GN++ +++ YQ
Sbjct: 61 SKVNGIINCGIKPIIIFDGQNLPSKQITTEKRKQEREQALEKARYFEQIGNNAEAFKNYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAV I+P H IQ L++ V Y VAPYEADAQ+ +LA S V+AV++EDSDLI + C
Sbjct: 121 KAVAITPETVHTWIQELQRNAVEYFVAPYEADAQLVYLAKSGYVDAVLSEDSDLIAYQCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+ K D + + L G +CIL+GCDY+ + +G K A
Sbjct: 181 TTLLKFDD-----TYHVLQIDFQNVLKLIGLPADTFTSLCILAGCDYIDHIDKLGPKTAL 235
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
+ KVI +K S +VP Y F +A+ TF+ R Y P T+++V LS
Sbjct: 236 KFLKDKNDPHKVIDMVKLNSKFTVPDDYHSKFDQALTTFKCARAYSPLTQELVFLSTPP- 294
Query: 300 NIGNDLDFLAK--------GIAIGDLDPFTQLPFQEVSD 330
D FL + G + T LPFQ +++
Sbjct: 295 --AIDTSFLGAEMSENQLIDLVKGRISANTLLPFQIINE 331
>gi|60102674|gb|AAX14025.1| exonuclease [Monascus pilosus]
Length = 678
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 190/350 (54%), Gaps = 17/350 (4%)
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L +GV P L+FDG LP K E++R + R+E+ A +E +G + +Y+ QKAVD
Sbjct: 1 MLIFFGVTPYLVFDGDNLPSKSGTESERQKKREESKALGLELYKKGRVAEAYQELQKAVD 60
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P +A +LI+ LK+ V Y+VAPYEADAQ+ FL + +I+EDSD++ FG R++
Sbjct: 61 VTPYMARQLIEELKKMKVEYVVAPYEADAQLVFLERQGIINGIISEDSDMLVFGARRLLS 120
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D+ G +E + K++S G+T MCILSGCDYL ++ +GLK A+ I
Sbjct: 121 KLDQHGDCIEINRADFAACKEVSLVGWTDADFRRMCILSGCDYLPNISKLGLKTAYRSIR 180
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN--- 300
K+K+ DK ++ L+ VP Y E+F +A LTF +QRV+ P +V L+ +
Sbjct: 181 KYKNVDKALRMLQLEGQYRVPADYLENFKQAELTFLYQRVFCPTAGKLVPLTPPEMDVTL 240
Query: 301 -----IGNDLDF-LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERKKL 354
IG+D+D +A G+A GDLDP T+ P + V + F ++ K
Sbjct: 241 ENLTFIGDDMDPDIATGVARGDLDPTTKQPISLKPPMTGKWVPSIGRRQTFGSSADLKP- 299
Query: 355 DLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSS 404
+ P+ K+ + PN +P SP + E + S ++S
Sbjct: 300 NKPISSFFTPKRVPLAELDPNSLTP------SPSQQRLLERHANSSWEAS 343
>gi|19074876|ref|NP_586382.1| EXONUCLEASE 1 [Encephalitozoon cuniculi GB-M1]
gi|19069601|emb|CAD25986.1| EXONUCLEASE 1 [Encephalitozoon cuniculi GB-M1]
Length = 366
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/311 (36%), Positives = 182/311 (58%), Gaps = 14/311 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP++ ++ HI + V VD ++WL++ + E+ +PT RH+D
Sbjct: 1 MGISGLLPIVAPKLVKKHISSYKRQRVGVDGHAWLYQILPCVAEEMFFKVPTKRHVDLFE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE-FY 119
+V LL YG+ P+++ DG LL K E+ N++ R RKE + E N A + F
Sbjct: 61 EKVKLLESYGIIPVIVLDGDLLSSK-EETNRKRRIRKEKSRKEAEYWLMRNDPAKAKGFM 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ + ++ + ++ ++L++ NV YI++PYE+DAQ+ FL ++ ++TEDSDLIP+G
Sbjct: 120 RQCIAVTREVVSDIARMLERINVEYIISPYESDAQLCFLQRIGYIDCILTEDSDLIPYGS 179
Query: 180 SRIIFKMDK-FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
S++++K D F Q +C K KD ++ +L++ ILSGCDYL S+ G+G+
Sbjct: 180 SKVLYKFDSAFVQEFNRECLSEVKGKDF------EENILDISILSGCDYLASIQGVGVVT 233
Query: 239 AHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
AH L+S+ K+ ++V+++LKY VP Y E F +A TF HQ VYDP + HL
Sbjct: 234 AHRLLSREKTVERVVEYLKYRK-PVPSSYLEDFSRAKKTFLHQIVYDPIQKRRRHLQ--- 289
Query: 299 DNIGNDLDFLA 309
+ G LDFL
Sbjct: 290 -DAGEKLDFLG 299
>gi|300175835|emb|CBK21831.2| unnamed protein product [Blastocystis hominis]
Length = 276
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 153/255 (60%), Gaps = 1/255 (0%)
Query: 1 MGIQGLLPLLK-SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYC 59
MGI +K ++ P+++ + G AVD WLHKG SC +ELC +PT ++++YC
Sbjct: 9 MGIYNAYKKIKPELLKPVNLSDYRGKRAAVDIMCWLHKGIYSCGKELCLSMPTKKYVNYC 68
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
M VNLL + PI++FDG LP+K N+R R L RA E E+ + + +Y
Sbjct: 69 MRFVNLLLQNDIVPIIVFDGADLPIKEATNNERKEKRSLALKRAKEYEANCDVKNALIYY 128
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
AVDI+P + LI+ L N+SYIVAPYEADA++ +L+ V+ VIT DSDLI FGC
Sbjct: 129 SSAVDITPDLYIPLIKELIAHNISYIVAPYEADAELAYLSRMNLVDFVITIDSDLIAFGC 188
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
S+I+F ++ G G EF L ++ LSF FT++M L IL GCDYL++ G KR
Sbjct: 189 SKILFDLNNQGAGFEFSRKDLFLSESLSFTQFTEEMALCFFILLGCDYLKNPKQWGWKRL 248
Query: 240 HALISKFKSYDKVIK 254
+I K K+ ++I+
Sbjct: 249 FPIIEKGKTASQIIE 263
>gi|449328623|gb|AGE94900.1| exonuclease 1 [Encephalitozoon cuniculi]
Length = 366
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 182/311 (58%), Gaps = 14/311 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP++ ++ HI + V VD ++WL++ + E+ +PT RH+D
Sbjct: 1 MGISGLLPIVAPKLVKKHISSYKRQRVGVDGHAWLYQILPCVAEEMFFKVPTKRHVDLFE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE-FY 119
+V LL YG+ P+++ DG LL K E+ N++ R RKE + E N A + F
Sbjct: 61 EKVKLLESYGIIPVIVLDGDLLSSK-EETNRKRRIRKEKSRKEAEYWLMRNDPAKAKGFM 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ + ++ + ++ ++L++ NV YI++PYE+DAQ+ FL ++ ++TEDSDLIP+G
Sbjct: 120 RQCIAVTREVVSDIARMLERINVEYIISPYESDAQLCFLQRIGYIDCILTEDSDLIPYGS 179
Query: 180 SRIIFKMDK-FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
S++++K D F + +C K KD ++ +L++ ILSGCDYL S+ G+G+
Sbjct: 180 SKVLYKFDSAFVREFNRECLSEVKGKDF------EENILDISILSGCDYLASIQGVGVVT 233
Query: 239 AHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
AH L+S+ K+ ++V+++LKY VP Y E F +A TF HQ VYDP + HL
Sbjct: 234 AHRLLSREKTVERVVEYLKYRK-PVPSSYLEDFSRAKKTFLHQIVYDPIQKRRRHLQ--- 289
Query: 299 DNIGNDLDFLA 309
+ G LDFL
Sbjct: 290 -DAGEKLDFLG 299
>gi|432106297|gb|ELK32183.1| Exonuclease 1 [Myotis davidii]
Length = 942
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 182/344 (52%), Gaps = 58/344 (16%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL LK PIH+++ +G VAVDTY WLHKGA++C+ +L KG PT +
Sbjct: 25 MGIQGLLQFLKDASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDKR----- 79
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ NL + + EG + E +
Sbjct: 80 -----------------------------------RQANLLKGKQLLREGKVPEARECFT 104
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ V+++ ++AH +I+ + Q V +VAPYEADAQ+ +L + V+A++TEDSDL+ FGC
Sbjct: 105 RCVNVTHAMAHNVIKAARAQGVDCLVAPYEADAQLAYLNKAGIVQAIVTEDSDLLAFGCK 164
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L K L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 165 KVILKMDQFGNGLEIDQARLGMCKQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 223
Query: 241 ALISKFKSYD--KVIKHLKY---STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK L + ++VP Y + F +A TF +Q V+DP +V L+
Sbjct: 224 KVLRLANNPDIVKVIKKLGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIRRKLVPLN 283
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D+I D +A IA+G+ D T F+++ D
Sbjct: 284 DYGDDIDPAALSYAGRYIDDSIALQIALGNKDINT---FEQIDD 324
>gi|320167587|gb|EFW44486.1| exodeoxyribonuclease 1 [Capsaspora owczarzaki ATCC 30864]
Length = 522
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 202/414 (48%), Gaps = 80/414 (19%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +LKSI H+++ G V +D Y WLH+ A +C+ EL +G PT D+
Sbjct: 1 MGIQGLLQVLKSIGQKTHVQQFAGQRVGIDAYGWLHRAAYACAAELAQGRPTDVRRDFYT 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
A+A + +Y YQ
Sbjct: 61 ----------------------------------------AQAAASLRNDDHFTAYRHYQ 80
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K VD L+ NV YIVAPYEADAQ+ +LA + AVI+EDSDL+ FGC
Sbjct: 81 KCVD-----------ALRAINVEYIVAPYEADAQLGYLARENYIAAVISEDSDLLLFGCQ 129
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
R+++KMDKFG+GV +L +T L MCILSGCDYL S+ G+GLK A+
Sbjct: 130 RVLYKMDKFGEGVLIDQKDFANCLELDLQNWTLDQLRRMCILSGCDYLDSISGIGLKTAN 189
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
L+ ++K+ V+ H++ + VP YE+ F +A TF++QRV P + ++ H++ + D
Sbjct: 190 KLLIRYKTVQNVVTHMRKKMMDVPRDYEDLFLQAENTFKYQRVVHPGSLELTHVTPVPDA 249
Query: 301 IG-NDLDFL--------AKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLK-------- 343
+ + +D++ A+GIA+G+++P T N+ +VV ++
Sbjct: 250 VDISQMDYIGPILEPHVARGIALGNINPNTMACMDNYDPNATMVVSSKEVVETDADSCAA 309
Query: 344 ---NFKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSP-EETSSLSPGEHHTA 393
N +P S R + P+ + P+ N FS TS+L+P ++ +
Sbjct: 310 PCANTEPSSTRLTIPKPM--------WIAPKAFKNRFSAFSATSNLAPLQNQAS 355
>gi|321462066|gb|EFX73092.1| hypothetical protein DAPPUDRAFT_110118 [Daphnia pulex]
Length = 283
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/259 (42%), Positives = 157/259 (60%), Gaps = 16/259 (6%)
Query: 54 RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
R++ YC+ VN+L + +KPIL+FDG LP K+ E KR +R+ N +A E +GN+S
Sbjct: 3 RYVTYCVKFVNMLLSHDIKPILVFDGQPLPSKLGTELKRRENRERNKIQAREYLRQGNNS 62
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
+ E +QK VD++ ++A ELI+V + +N+ IVAPYEADAQ+ FLA+ +ITEDSD
Sbjct: 63 KARECFQKCVDVTSTMALELIKVCRARNIDCIVAPYEADAQLAFLAIQGIAHLIITEDSD 122
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKNK-DLSFGG----FTKQMLLEMCILSGCDYL 228
L+ FGC RI+FKMD+ G GV +++K+K LS GG F + MCILSGCDYL
Sbjct: 123 LLAFGCPRILFKMDQAGTGV-----LIEKDKLFLSLGGQAEFFNDEKFRRMCILSGCDYL 177
Query: 229 QSLPGMGLKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQR 282
SL G+GL RA S D KV L T+ + Y E+F KA TF +Q
Sbjct: 178 PSLKGIGLARAFKFFSGSTDSDLNSLLCKVPACLNMPTLEITLEYRENFVKAEQTFLYQL 237
Query: 283 VYDPKTEDIVHLSCISDNI 301
+Y+P+ ++ L+ N+
Sbjct: 238 IYEPRQRKLLPLTTYPPNL 256
>gi|358368265|dbj|GAA84882.1| exonuclease [Aspergillus kawachii IFO 4308]
Length = 688
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 227/449 (50%), Gaps = 38/449 (8%)
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+L ++GV P L+FDG LP K E +R + R+++ A +E + +G + +Y+ QKAVD
Sbjct: 1 MLLYFGVTPYLVFDGDELPSKAGTEVERQKRRQDSKALGLELQRKGRIAEAYQELQKAVD 60
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P +A ELI+ LK+ +V Y+VAPYEADAQ+ +L + +I+EDSDL+ FG R++
Sbjct: 61 VTPLMARELIEELKKIDVQYVVAPYEADAQLAYLEQQGIIAGIISEDSDLLVFGAKRLLS 120
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
K+D+ G +E + +++S G+T MCILSGCDYL ++ +GLK A+ I
Sbjct: 121 KLDQHGDCIEINRADFSACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTAYRSIR 180
Query: 245 KFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN--- 300
K+K+ ++ ++ L++ VP Y ++F +A LTF +QRV+ PK +V L+ +
Sbjct: 181 KYKNVERALRMLQFDGQYHVPSDYLDNFRQAELTFLYQRVFCPKAGKLVTLTPPEADVKL 240
Query: 301 -----IGNDLDF-LAKGIAIGDLDPFTQ-----LPFQEVSDNSHLVVGQNSHLKNFKPES 349
IG D++ +A G+A GDLDP T+ P + S + +
Sbjct: 241 EELTFIGGDVEPDIAVGVARGDLDPTTKERLVLKPSLAAKPADKRLTNTISRRQTLGSSA 300
Query: 350 ERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSRMEL 409
E K + P+ K+ + PN SP + H A +S D S + SR L
Sbjct: 301 ELKP-NKPINSFFTPKRVPLAELDPNSLSPSPSQQRLLQRH--ANSSWD-SVPAPSRPAL 356
Query: 410 ----ETVGNFPHNSS------EKNCFASEVPEFSA-SPSREMENERNAEHTSLPQ----- 453
+VG+ SS E+N F + S+ P++ +AE +LP
Sbjct: 357 MRSASSVGSSNRASSPLIRSVERNAFLAHASRTSSLQPAKRQRLCSDAEEANLPNPPDSR 416
Query: 454 ---FCRSIRNPCPALRKEHENKNCTDSVV 479
F S+ + P+ +K K S +
Sbjct: 417 SRFFSGSVNDASPSAQKATRTKKARKSTL 445
>gi|297734295|emb|CBI15542.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 155/240 (64%), Gaps = 19/240 (7%)
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFL----AVSKQV 164
EG+ + + E +Q+AV I+PS+AH+LIQ+L+ +N+ ++VAPYEADAQ+ +L A +
Sbjct: 90 EGDVTGASELFQRAVTITPSMAHQLIQILRTENIEFVVAPYEADAQLAYLSNLEADKGGI 149
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKN--KDLSFGGFTKQMLLEMCIL 222
AVITEDSDL+ +GC IIFKMD++G G E + + + SF F K++ MC+L
Sbjct: 150 AAVITEDSDLMAYGCRAIIFKMDRYGNGEEMVLDRVFDSVARAPSFQNFDKELFTGMCVL 209
Query: 223 SGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQ 281
+GCD+L S+PG+G+ RA+++++K+++ D+V+ LK+ + +P Y +SF +AV FQH
Sbjct: 210 AGCDFLPSVPGIGIARAYSMVAKYRNLDRVLSVLKFEKRNQMPEDYTKSFREAVAVFQHA 269
Query: 282 RVYDPKTEDIVHLSCISDN----IGNDLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
R+YD T+ + H+ ++D+ + +LDFL A IA G+LDP T F S
Sbjct: 270 RIYDADTKRVQHMKPLTDDLLQSLDGELDFLGPEIPPSIATAIAEGNLDPVTMEAFDHFS 329
>gi|256072777|ref|XP_002572710.1| exonuclease [Schistosoma mansoni]
gi|353229077|emb|CCD75248.1| putative exonuclease [Schistosoma mansoni]
Length = 728
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 152/244 (62%), Gaps = 1/244 (0%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLLP LK+ PI++ + G AVD Y W+H+ + +C+ +L G+PT +++ Y +
Sbjct: 1 MGIKGLLPFLKNASAPINLADFSGYVAAVDVYCWIHRSSYACASDLALGIPTDQYVRYVI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+NL++ VKPIL+FDG LP K E + KR +++ N +A E +G+ +A+ E ++
Sbjct: 61 KYINLMKSCNVKPILVFDGSDLPSKAETDLKRRETKELNRKKAAEYLMKGDKAAAQECFE 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++V ++ +A+E+++ + V +VAPYEADAQ+ +L + + VITEDSDL+ FGC
Sbjct: 121 RSVFVTSEMAYEVLRAARNMGVDCVVAPYEADAQLAYLNRTGYADFVITEDSDLLLFGCR 180
Query: 181 RIIFKMDKFGQGVEF-QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+++FK+D G GV S + + + FT+ M I++GCDY +PG+GL A
Sbjct: 181 QVVFKLDLSGSGVLVAAASGICECCGIPASQFTESKFRYMGIMAGCDYFSGIPGIGLNTA 240
Query: 240 HALI 243
++
Sbjct: 241 AKIL 244
>gi|164657682|ref|XP_001729967.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
gi|159103861|gb|EDP42753.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
Length = 572
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 152/257 (59%), Gaps = 11/257 (4%)
Query: 94 RSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADA 153
R R+E+ R ++ E SA+ + + +++D++PS+A+ELI++L+ Q + Y+VAPYEADA
Sbjct: 13 RRRQEHRTRGLQYYREKRGSAARDAFVRSIDVTPSMAYELIKILRAQGIPYVVAPYEADA 72
Query: 154 QMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTK 213
Q+ +L ++A+ITEDSDL+ FGC ++FK+D +G VE Q K L+F G++
Sbjct: 73 QLAYLEQEGLIDAIITEDSDLLVFGCKTVLFKLDTYGHCVEIQRDRFVHAKQLAFDGWSL 132
Query: 214 QMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKY-STVSVPPFYEESFG 272
M ILSGCDYL S+ GMGLK AH + K++S ++V++ L+ + VPP Y F
Sbjct: 133 DDFRRMAILSGCDYLPSITGMGLKNAHKFLRKYESIERVLRVLQLEGKMHVPPAYAADFA 192
Query: 273 KAVLTFQHQRVYDPKTE-DIVHLSCISDNIGNDLDFL---------AKGIAIGDLDPFTQ 322
+A TF HQRV+DP+ + L+ + +I DL A+ IA GDL P T+
Sbjct: 193 RAEFTFAHQRVWDPRGPGSLTTLAPLPCDINEDLLACIGIPPSLEEARAIAHGDLCPITR 252
Query: 323 LPFQEVSDNSHLVVGQN 339
P + L Q+
Sbjct: 253 QPLSRPALGIALAPAQS 269
>gi|145493760|ref|XP_001432875.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399990|emb|CAK65478.1| unnamed protein product [Paramecium tetraurelia]
Length = 553
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 168/308 (54%), Gaps = 13/308 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LL LK ++ I G A+D SWL++G SC+ EL + + T+ ++ Y
Sbjct: 1 MGIENLLNFLKPALVERCITFYRGKTAAIDAMSWLYRGCYSCAHELNQDIKTNDYLYYVQ 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L+ Y + PILIFDG L K + E R + +++NL +A E + GN+ + +YQ
Sbjct: 61 KMLIMLKEYEITPILIFDGRNLRAKEKTEQMRKQIKQQNLLKAKELQESGNTEEAKRYYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ + I + + VL++ V YI+APYEADAQ+ + +S Q + ITEDSDLI + C
Sbjct: 121 RCLKIRKQMMYTTFDVLRELEVQYIIAPYEADAQIAHMCLSGQCDFAITEDSDLICYQCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQ---------KNKDL-SFGGFTKQMLLEMCILSGCDYLQS 230
I+FK+ G E + L+ K+ D+ F F + L+++CI+SGCDY+ S
Sbjct: 181 LIVFKLQSNGACFELELQKLRESRQNRAHIKSDDIRQFLAFKNEQLIDVCIMSGCDYVPS 240
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTV---SVPPFYEESFGKAVLTFQHQRVYDPK 287
+ GMG+K+A +SK+ I LK + +P YE+ L FQ Q VY P
Sbjct: 241 IRGMGIKKAIDYMSKYDDISNTISKLKKAKQFNGKIPEEYEKIVKATRLIFQFQTVYCPT 300
Query: 288 TEDIVHLS 295
+ V L+
Sbjct: 301 KKQWVQLN 308
>gi|300175407|emb|CBK20718.2| unnamed protein product [Blastocystis hominis]
Length = 383
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 166/281 (59%), Gaps = 11/281 (3%)
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
SR + YC++R++ L G+ P ++FDG LP+K R +R+ N+ A + E EG
Sbjct: 2 SRLVQYCLNRLDELITEGLVPYVVFDGADLPIKGGTNESRREARQRNMEIAQQKEREGKI 61
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ +++ +A++ISP + LI LK++N+ ++VAPYE+DAQ+ FL + ++ VITED
Sbjct: 62 DEASDYFYRALEISPDLYAPLIAQLKERNIQFLVAPYESDAQLGFLFRNNYIDLVITEDG 121
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
D + +GC R++FK+DK G G E S L L+F +T M +C+LSGCDYL SL
Sbjct: 122 DTLVYGCRRVLFKLDK-GTGEEIDMSRLSHCTKLNFCDWTHDMFTYLCVLSGCDYLPSLR 180
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
G+G+ RA+ +S+ ++ + +L+ T VP YE F +AV TF+HQ V+DP+ V
Sbjct: 181 GIGIVRAYQAVSRGRTPAGIFAYLRGVT-EVPLEYENGFARAVFTFRHQTVFDPQRRAAV 239
Query: 293 HLSCISDN--------IGNDLDF-LAKGIAIGDLDPFTQLP 324
L + + +G L LA IA G++DP TQ P
Sbjct: 240 PLLPLPASLQAQPPAYLGPVLPADLAVRIAAGEVDPVTQRP 280
>gi|397588883|gb|EJK54438.1| hypothetical protein THAOC_25932, partial [Thalassiosira oceanica]
Length = 880
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 181/337 (53%), Gaps = 33/337 (9%)
Query: 24 GCCVAVDTYSWLHKGALSCS-RELCK--------------GLPT-SRHIDYCMHRVNLLR 67
G VAVD SWLHKG +C+ ++L + PT ++ +Y + LLR
Sbjct: 212 GLTVAVDACSWLHKGIFACNVKDLARCQRGVGTDGGGGGGTRPTEAKCAEYAARKAELLR 271
Query: 68 H-YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDIS 126
+G+ +L+ DG LP K E+ +R R RA+ E + A+ FY +A I+
Sbjct: 272 RSFGINVLLVIDGDSLPSKKEENLQRRAERDRAYDRAVAAEGARDGRAARRFYAQACSIT 331
Query: 127 PSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM 186
I H LI+ + + + ++VAPYEADAQM LA + V+ VITEDSD++ +GC R+++K
Sbjct: 332 QGIKHGLIEECRGRGIPFLVAPYEADAQMARLAHTGAVDLVITEDSDMLVYGCPRVLYKA 391
Query: 187 D-KFGQGVEFQCSM-LQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
D K GQG E Q L +N SF FT M + M ILSGCDY + +PG+G+K AH L+
Sbjct: 392 DFKTGQGQEIQLMRDLGENVSPSFRNFTHDMFVFMAILSGCDYCKGVPGIGIKLAHKLVR 451
Query: 245 KFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN---- 300
++ K+ L+ + +P +E+ F KA TF+HQRV+ P + + L I +
Sbjct: 452 VHRTPSKIFNALR-TAGRMPRDFEDCFWKAYRTFRHQRVFCPSKQVVEPLWPIPSSHTSP 510
Query: 301 --------IGNDLD-FLAKGIAIGDLDPFTQLPFQEV 328
+G ++D +A +A G L P ++ P+ E
Sbjct: 511 SGGDLWPYLGEEVDSHIAAKVANGTLHPSSKQPWAEA 547
>gi|312082984|ref|XP_003143672.1| XPG I-region family protein [Loa loa]
gi|307761164|gb|EFO20398.1| XPG I-region family protein [Loa loa]
Length = 609
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 23/302 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP +K+ +I E VAVD LH+G + C+ ++ +G T +I Y +
Sbjct: 1 MGIHNLLPFVKNACRQGNINEFAHQSVAVDVSCLLHRGLIGCADKVAQGCETDFYIRYVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V L G IL+FDG +LP K E + R R + R SEG +S +Y+ ++
Sbjct: 61 KYVRALLAIGCHIILVFDGQMLPAKKETNSSRREKRDFHKQRGDLLLSEGRASEAYDCFK 120
Query: 121 KAVDISPSIAHELIQVLKQQN-VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ ++P + IQ ++ N V IVAPYE+DAQ+TFL +K V+AV+TEDSDLI FGC
Sbjct: 121 RSTSLTPRVIETAIQAFRRLNMVDVIVAPYESDAQLTFLTKTKMVQAVVTEDSDLIAFGC 180
Query: 180 SRIIFKMDKFGQGVEFQ--------CSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS- 230
+IIFKMD G V F C L +N D F F + +CILSGCDYLQ+
Sbjct: 181 EKIIFKMDPSGSCVIFDQNLLPRCLCRALAENFD--FDKFRR-----ICILSGCDYLQAG 233
Query: 231 LPGMGLKRAHALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY 284
LPG+GL +A A +K ++ ++ ++L +++ V + + F +A TF +Q V+
Sbjct: 234 LPGVGLNKAAAFFAKTDGRNLYQILPRLPRYLNKNSLKVTKQFIDDFIRAENTFLYQIVF 293
Query: 285 DP 286
DP
Sbjct: 294 DP 295
>gi|402589958|gb|EJW83889.1| XPG I-region family protein [Wuchereria bancrofti]
Length = 608
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 168/300 (56%), Gaps = 19/300 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP +K+ +I E VAVD LH+G + C+ ++ +G T +I Y +
Sbjct: 1 MGIHNLLPFVKNACRQGNISEFAHQSVAVDISCLLHRGLIGCADKVAQGCETDFYIRYVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V L G IL+FDG +LP K E + R R + R SEG +S +Y ++
Sbjct: 61 KYVKALLAIGCHVILVFDGQMLPAKKETNSSRREKRDFHKQRGDLLMSEGRASEAYNCFK 120
Query: 121 KAVDISPSIAHELIQVLKQQN-VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ ++P + IQ ++ N V IVAPYE+DAQ+TFL +K +AV+TEDSDLI FGC
Sbjct: 121 RSATLTPKVIESAIQAFRRLNMVDVIVAPYESDAQLTFLTKTKMAQAVVTEDSDLIAFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQK------NKDLSFGGFTKQMLLEMCILSGCDYLQS-LP 232
+IIFKMD G V F S+L K ++ F F + +CILSGCDYLQ+ LP
Sbjct: 181 EKIIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRR-----ICILSGCDYLQAGLP 235
Query: 233 GMGLKRAHALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
G+GL +A A +K ++ ++ ++L +++ V + + F +A TF +Q V+DP
Sbjct: 236 GVGLNKAAAFFAKTNGRNLYQVLPRLPRYLNKNSLKVTKQFIDDFIRAENTFLYQIVFDP 295
>gi|332236488|ref|XP_003267433.1| PREDICTED: exonuclease 1 [Nomascus leucogenys]
Length = 817
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 187/344 (54%), Gaps = 47/344 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLL +K IH+++ +G ++ +CM
Sbjct: 1 MGIQGLLQFIKEASELIHVRKYKG-----------------------------XYVGFCM 31
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KPIL+FDG LP K E E R R+ NL + + EG S + E +
Sbjct: 32 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 91
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++++I+ ++AH++I+ + Q V +VAPYEADAQ+ +L + V+A+ITEDSDL+ FGC
Sbjct: 92 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 151
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+GL +A
Sbjct: 152 KVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGIGLAKAC 210
Query: 241 ALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ + D KVIK H ++VP Y + F +A TF +Q V+DP ++ L+
Sbjct: 211 KVLRLANNPDIVKVIKKIGHYLKMNITVPEDYIKGFIRANNTFLYQLVFDPIKRKLIPLN 270
Query: 296 CISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
D++ + D +A IA+G+ D T F+++ D
Sbjct: 271 AYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 311
>gi|440291991|gb|ELP85233.1| exodeoxyribonuclease, putative [Entamoeba invadens IP1]
Length = 476
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 190/352 (53%), Gaps = 32/352 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LLP L +I+ + VA+D Y+ LH+ A ++ L T+ + M
Sbjct: 1 MGIKALLPFLSTIIHKTPLANFRNKRVAIDGYAILHRVATRNAKRLLLQHDTAFLVQGVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V + G+ P+ +FDG LP K++ E R R++ L A + + EG + + FY+
Sbjct: 61 EFVTFFKTQGIIPLFVFDGATLPAKMKTEEARQLKRQQALENAKQLDKEGKDTMALSFYK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KA+DI+P +A ++I L++ NV Y+VAPYEADA++ +L+ + V+ V+ EDSDLIP+G +
Sbjct: 121 KAIDITPKMAFDVINELRRSNVEYVVAPYEADAELAYLSRTGYVDLVVCEDSDLIPYGST 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDL---SFGGFTKQMLLEM-CILSGCDYLQSLPGMGL 236
I+FKM+ G+GV + L K DL FG L+++ C+++GCDY + + G+G+
Sbjct: 181 AILFKMN-VGEGV----ADLYKAADLPLSPFGSNVSLFLVQIVCVVAGCDYFEGIEGIGM 235
Query: 237 KRAHALISKFKS-YDKV--IKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
K+ ++ K K+ D V IK K + ++ +A+ TF HQ VYD + + IV+
Sbjct: 236 KKGLEMLKKCKTEKDAVFEIKKKKKMSGDEALQVQQKIREALFTFNHQYVYDIEDKLIVN 295
Query: 294 LS-----------------CISDNIGNDLDFLAKGIAIGDLDPFTQLPFQEV 328
L+ + ND + K IAIG +DP T F ++
Sbjct: 296 LTEIEASERTLFDDTTIEKVLGKKFSND---IGKKIAIGSIDPNTLEIFGDI 344
>gi|170589924|ref|XP_001899723.1| XPG I-region family protein [Brugia malayi]
gi|158592849|gb|EDP31445.1| XPG I-region family protein [Brugia malayi]
Length = 603
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 165/300 (55%), Gaps = 19/300 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP +K +I E VAVD LH+G + C+ ++ +G T +I Y +
Sbjct: 1 MGIHNLLPFVKKACRQGNISEFAHQSVAVDISCLLHRGLIGCADKVAQGCETDFYIRYVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V L G IL+FDG +LP K E N R R + R SEG +S +Y ++
Sbjct: 61 KYVKALLAIGCHVILVFDGQMLPAKKETNNSRREKRDFHKQRGDLLMSEGRASEAYNCFK 120
Query: 121 KAVDISPSIAHELIQVLKQQN-VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ ++P + IQ + N V IVAPYE+DAQ+TFL +K +AV+TEDSDLI FGC
Sbjct: 121 RSATLTPKVIENAIQAFRHLNMVDVIVAPYESDAQLTFLTKTKMAQAVVTEDSDLIAFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQK------NKDLSFGGFTKQMLLEMCILSGCDYLQS-LP 232
+IIFKMD G V F S+L K ++ F F + +CILSGCDYLQ+ LP
Sbjct: 181 EKIIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRR-----ICILSGCDYLQAGLP 235
Query: 233 GMGLKRAHALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
G+GL +A A +K ++ ++ ++L +++ V + + F +A TF +Q +DP
Sbjct: 236 GVGLNKAAAFFAKTNGRNLYQVLPRLPRYLNKNSLKVTKQFIDDFIRAENTFLYQIXFDP 295
>gi|401828054|ref|XP_003888319.1| putative exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392999591|gb|AFM99338.1| putative exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 366
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 199/372 (53%), Gaps = 24/372 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP++ ++ HI + + +D ++WL++ S E+ +PT +HI
Sbjct: 1 MGISGLLPIVAPKLVKRHISSYKHQRIGIDGHAWLYQILSFVSEEIFFKVPTKKHIAMFE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V +L +YG+ P+++ DG LP K E KR ++ N A + + + F +
Sbjct: 61 EKVRVLENYGITPVVVLDGDTLPSKEETNRKRQVKKERNRKEAEHWLMKNDPEKAKGFMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ + ++ I +++++L++ NV YI++PYE+DAQ+ +L ++ ++TEDSDLIP+G +
Sbjct: 121 QCITVTREIVSDIVKMLERINVEYIISPYESDAQLCYLQRIGYIDCILTEDSDLIPYGSN 180
Query: 181 RIIFKMD-KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
RI++K D F Q C + KD ++ +L++ ILSGCDYL S+ G+G+ A
Sbjct: 181 RILYKFDCTFVQEFTRDCLTEARGKDF------EENILDISILSGCDYLASIQGIGVVTA 234
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
H L+S+ K+ + VI++L++ VP Y + F KA TF HQ VYDP + +L
Sbjct: 235 HKLLSREKTVEGVIEYLRHRK-PVPSGYLDDFLKAKKTFLHQVVYDPIQQKRRYLR---- 289
Query: 300 NIGNDLDFLAK------GIAIGDLDPFTQLPFQEVSDNSHLVVG------QNSHLKNFKP 347
++ LDFL I G L+ F + P + + H + + S +K K
Sbjct: 290 DLREKLDFLGTLKEEEYRIEDGPLESFFKAPRKIRAIKRHFIPAIKKRRSEASEIKRGKK 349
Query: 348 ESERKKLDLPVQ 359
E K+D+ +
Sbjct: 350 ERHEAKVDIHIH 361
>gi|365989346|ref|XP_003671503.1| hypothetical protein NDAI_0H00860 [Naumovozyma dairenensis CBS 421]
gi|343770276|emb|CCD26260.1| hypothetical protein NDAI_0H00860 [Naumovozyma dairenensis CBS 421]
Length = 416
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 178/321 (55%), Gaps = 8/321 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK+I P+ + G + +D Y+WLHK A SC+ EL G PT +++ Y +
Sbjct: 1 MGIAGLLPQLKTIQRPMTLSRYAGMTLGIDGYAWLHKAACSCAYELVMGRPTEKYLQYFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +++ ++P ++FDGG + +K E R R R+ N A + G A+ E +Q
Sbjct: 61 RKFKMMKQLNIQPFVVFDGGPIEVKRAIEMDRLRKRENNKLMAKKLWCNGERHAAMERFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++ +A +I K ++ Y++AP+EAD+QM +L ++ +I+EDSD++ FG +
Sbjct: 121 KSVDVTTEMAKCIIDYCKDNSIPYVIAPFEADSQMVYLEKIGMIDGIISEDSDILIFGGN 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSF--GGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
R+I K++ G ++ + K + F G T + + LSGCDY + +GL
Sbjct: 181 RLITKLNDSGDCLQISSADFIKVQTEKFPIGELTADQIRMLVCLSGCDYTNGIWKIGLIT 240
Query: 239 AHALISKFKSYDKVIKHLK-----YSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
A L+ +F + +I +LK + + + + A +FQ+QRV+ PK +IV
Sbjct: 241 AMKLVKQFSDMNSIISYLKELNNDKKKYIISDTFLQEYEFANYSFQYQRVFCPKRNEIVT 300
Query: 294 LSCISDNIGN-DLDFLAKGIA 313
L+ IS+ N +L+ +++ I
Sbjct: 301 LNEISNITSNKELEIISQCIG 321
>gi|393244253|gb|EJD51765.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 320
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 170/304 (55%), Gaps = 10/304 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GL L + HI+ L G + +D Y LH+GAL+C+REL G+PT+ ++
Sbjct: 1 MGVTGLFEFLNAKRSHSHIETLAGTRLGIDGYVVLHRGALTCARELASGVPTTAYLHEVK 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +LRHY ++P +FDG LP K +R R+E + RA E +G+ AS Y+
Sbjct: 61 RLLLMLRHYDIEPYFVFDGQALPAKANVTRRRMAVREEAILRAATLEKKGDKRASAVAYK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+V ++ + + I++L+ + Y+VAPYEADAQ+ FL ++AV +EDSDL+ FG
Sbjct: 121 ASVVVTTQMVTQTIKILRAAGIPYLVAPYEADAQLAFLDRVGLIDAVYSEDSDLVVFGVQ 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++ K+ G C+++ ++ DLS + L M +L+GCDY + LPG+GL AH
Sbjct: 181 KLVCKLQDDG-----ACAIV-RHADLS---VSHSHLRLMALLAGCDYTRGLPGVGLATAH 231
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
+ ++F IK +++ ++ A F Q V+DPKT ++ L+ ++D+
Sbjct: 232 KVANQFPVISTYIKR-RFTNTPELELFQREMRLANAAFLFQTVFDPKTRALISLNDLTDD 290
Query: 301 IGND 304
+ D
Sbjct: 291 VPWD 294
>gi|412993637|emb|CCO14148.1| exonuclease [Bathycoccus prasinos]
Length = 640
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 187/352 (53%), Gaps = 27/352 (7%)
Query: 1 MGIQGLLPLLKSIMIP-IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR-HIDY 58
MGI LL +KSI HI + +AVD+Y WLHK A SCSREL + +
Sbjct: 1 MGISSLLLNIKSITKSGTHISAHKDSKIAVDSYCWLHKCAYSCSRELVENCGNQDVFVHA 60
Query: 59 CMHRVNLLRHY--GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASY 116
++R +L++ + +FDG LP K +E +R + R+ A + SEGN ++
Sbjct: 61 FLNRARMLKNSTGSSEVTYVFDGASLPSKAREEKQRRQRREAAKDMARKAWSEGNRKLAF 120
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYI-VAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
+ Y KA+D++ +A ++ ++++ + + VAP+EADAQ+ +L + + VITEDSD++
Sbjct: 121 DCYGKALDVTFEMAKRVMDAIEREGLGRVLVAPFEADAQLAYLCKNGYADVVITEDSDML 180
Query: 176 PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
G + +KMD G G E + L +N+ L F FT + L+MC +SGCDYL SLP +G
Sbjct: 181 AHGAPIVFYKMDNNGIGDEIRYEDLPRNRGLRFDQFTPDLFLQMCCMSGCDYLPSLPNVG 240
Query: 236 LKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
+K+AH + K + Y ++ K+ + V YE F A++TF+H VY P + V+LS
Sbjct: 241 MKKAHQAMRKCREYGAALRSFKFEGIRVDKEYESGFRDALITFKHALVYCPTRKKCVNLS 300
Query: 296 CISDNIG----------------------NDLDFLAKGIAIGDLDPFTQLPF 325
+++ G +D + +G+A G L P + P+
Sbjct: 301 DCAEDDGVPCEDVLNLRFSKEDEKRLLGERRVDAVCEGVANGKLHPVSLKPY 352
>gi|123492232|ref|XP_001326017.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121908925|gb|EAY13794.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 388
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 205/384 (53%), Gaps = 21/384 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLLPLL + H+ G VA+D + WLH+ + E+ K T + + Y M
Sbjct: 1 MGIKGLLPLLTPVSKRCHLSTFAGLKVAIDGFVWLHRVSFRYPIEIIKDPTTKKILPYLM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ ++ G+ P+++FDG LP K+ KR R+E+L A + E E ++E+YQ
Sbjct: 61 SRILSVKKCGLTPVVVFDGQALPAKLMTNQKRQEERRESLLIAQQLEKERRLPEAFEYYQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAV I+ + + I+ L+ + + YIV+PYEADAQ+ +LA S V+ V+TEDSDLI +
Sbjct: 121 KAVSITSATVYTWIKELRNECIEYIVSPYEADAQLAYLARSGYVDCVLTEDSDLIAYRTP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+++K+D Q + ++ L+F T +CI GCDY S+ + LKRA
Sbjct: 181 LVLYKLDD-----SLQVTSIRYQDVLNFLKLTPDNFTSLCIFGGCDYSPSITNLALKRAL 235
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ ++++ VI + +VP +E+ F A TF R YDP+TE +V LS +
Sbjct: 236 KLLLEYENPTNVIIAARSDQKYTVPAKFEDMFNMAFKTFLCARAYDPRTEKLVFLSDPPE 295
Query: 300 N---IGNDL--DFLAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLK-NFKPESERKK 353
+G+D+ D L K + G++D T PF+ + +S + + + K N P+ E K
Sbjct: 296 EHSFLGSDIAPDIL-KQLVKGEIDTVTLGPFELPNSSSSV----SPYFKTNSAPKIESVK 350
Query: 354 LDLPVQKNLLTKKFTTPRISPNHF 377
+ P Q +K F R++ F
Sbjct: 351 VGEPSQ----SKYFKCTRLTERPF 370
>gi|8671764|gb|AAF78370.1|AC069551_3 T10O22.7 [Arabidopsis thaliana]
Length = 492
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 167/347 (48%), Gaps = 99/347 (28%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LL +K ++PIHI++ G V +D YSWLHKGA SCS ELC
Sbjct: 1 MGIKDLLRFMKPYILPIHIQKYAGKRVGIDAYSWLHKGAYSCSMELC------------- 47
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
L DG K+ R RK N A+ EGN +A
Sbjct: 48 --------------LDTDG----------KKKLRKRKANFDAAMVKLKEGNVAA------ 77
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE-----AVITEDSDLI 175
A EL QVLK +NV +IVAPYEADAQ+ +L+ S ++E AVITEDSDL+
Sbjct: 78 ---------ATELFQVLKSENVEFIVAPYEADAQLAYLS-SLELEQGGIAAVITEDSDLL 127
Query: 176 PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMG 235
+GC F +++ MC+L+GCD+L S+PG+G
Sbjct: 128 AYGCK----------------------------ANFDQELFTAMCVLAGCDFLPSVPGVG 159
Query: 236 LKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+ RAHA ISK++S + V+ LK VP Y SF +AV FQH RVYD + + HL
Sbjct: 160 ISRAHAFISKYQSVELVLSFLKTKKGKLVPDDYSSSFTEAVSVFQHARVYDFDAKKLKHL 219
Query: 295 SCISDNIGN----DLDFL--------AKGIAIGDLDPFTQLPFQEVS 329
+S N+ N L+FL A IA G++DP T F S
Sbjct: 220 KPLSHNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 266
>gi|429964483|gb|ELA46481.1| hypothetical protein VCUG_02025 [Vavraia culicis 'floridensis']
Length = 414
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 178/315 (56%), Gaps = 21/315 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLLP++ + HI + + +D +SWLH S + +L + T H D +
Sbjct: 1 MGIKGLLPIVSPCLKKRHISAFKNHRIGIDGHSWLHCILPSIALQLYNNVRTHLHHDIFL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE-SEGNSSASYEFY 119
R+ +R +GV P+++FDG LP K N+R R+++E R E E S+GN + +
Sbjct: 61 KRIQGVRKHGVIPVVVFDGDSLPSKCVI-NERRRTKREEARRMAEIEMSKGNVRDAMRYM 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ IS + E+ Q LKQ +V I++PYE+DAQ+++L + +++TEDSDLI + C
Sbjct: 120 AGSISISREMVAEIAQFLKQNDVEVIISPYESDAQLSYLQRINYIHSIMTEDSDLIVYNC 179
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+ I++K + ++ S+ ++ D F LL++CILSGCDYL+++ G+G+ A
Sbjct: 180 NNILYKYAN-NHVMHYERSVFREKND-----FLCDNLLDVCILSGCDYLENVKGVGINSA 233
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH------ 293
L+ K +S + V+ ++ T SVP Y +F KA LTF++Q VYDP + V+
Sbjct: 234 IKLMKKLRSVELVVNEMR-RTKSVPESYLSNFIKARLTFKYQVVYDPVKNERVYLDGSSN 292
Query: 294 ------LSCISDNIG 302
L CIS IG
Sbjct: 293 SRNYEFLGCISAKIG 307
>gi|324503167|gb|ADY41381.1| Exonuclease 1 [Ascaris suum]
Length = 708
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 168/325 (51%), Gaps = 21/325 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQ LLP +K +I E G +A+D LH+G C+ + +G+ T ++ Y M
Sbjct: 1 MGIQNLLPFVKKACRQGYINEFAGHSIAIDVSCLLHRGLFGCADRIAQGIDTDFYVRYVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V LL IL+FDG LP K E R R E+ + + SEG +S +++ ++
Sbjct: 61 KYVKLLLAIHCHVILVFDGKPLPAKQETNIARREKRDEHKRKGEQLLSEGKTSEAFDCFK 120
Query: 121 KAVDISPSIAHELIQVLKQQN-VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ I+ + IQ + + V +VAPYE+DAQ+ FL + AV+TEDSDLI FGC
Sbjct: 121 RSTSITREVVESTIQGFQGMDMVDILVAPYESDAQLAFLTKNGMAHAVVTEDSDLIAFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQK------NKDLSFGGFTKQMLLEMCILSGCDYLQS-LP 232
RIIFKM+ G ++ S L K D F F + +CIL+GCDYLQS LP
Sbjct: 181 ERIIFKMEATGSCTIYEQSQLPKCLCKALADDFDFTKFRR-----ICILAGCDYLQSGLP 235
Query: 233 GMGLKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
G+GL +A ++K D ++ ++L S + + + F +A TF +Q VYDP
Sbjct: 236 GVGLNKAATFMAKTSGSDLERILPRLPRYLNMSNLKIKKEFIADFIRAENTFLYQIVYDP 295
Query: 287 KTEDIVHLS--CISDNIGNDLDFLA 309
+ L+ SD D DF+
Sbjct: 296 RLRRQRPLNDYPASDGTAEDEDFVG 320
>gi|396082436|gb|AFN84045.1| exonuclease 1 [Encephalitozoon romaleae SJ-2008]
Length = 366
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 176/310 (56%), Gaps = 12/310 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP++ + ++ HI + +D ++WL++ + E+ +PT +HI
Sbjct: 1 MGISGLLPIVATKLVKRHISSYRHQRIGIDGHAWLYQILSFVAEEMFFKVPTRKHITMFE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+V +L YG+ PI++ DG L K E KR + +N A + + + F +
Sbjct: 61 EKVKVLESYGITPIIVLDGDTLSSKEETNRKRYIKKDKNRKEAEHWLVKNDPEKAKGFMR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ + ++ I ++ ++L++ NV YI++PYE+DAQ+ +L ++ ++TEDSDLIP+G +
Sbjct: 121 QCIAVTKEIVSDIARMLERINVEYIISPYESDAQLCYLERIGYIDCILTEDSDLIPYGSN 180
Query: 181 RIIFKMDK-FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
RI++K D F Q C + +D ++ +L++ ILSGCDYL S+ G+G+ A
Sbjct: 181 RILYKFDNTFVQEFTRGCLSEARGRDF------EENILDISILSGCDYLASIQGVGVVTA 234
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
H L+SK K+ +KV+++L++ ++P Y + F KA TF HQ VYDP + +L
Sbjct: 235 HKLLSKEKTVEKVVEYLQHRK-AIPDNYLDDFFKAKKTFLHQIVYDPIQQKRRYLR---- 289
Query: 300 NIGNDLDFLA 309
++ LDFL
Sbjct: 290 DVKEKLDFLG 299
>gi|365761388|gb|EHN03046.1| Din7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 430
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 174/307 (56%), Gaps = 6/307 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK+I +++K+ +AVD Y+WLH+ + +C+ +L PT++++ + +
Sbjct: 1 MGIPGLLPHLKTIQKQVNLKKYMHQTLAVDGYAWLHRASCACAFDLVMNRPTNKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++ L+ ++P ++FDG L +K E +R R R EN A + S G+ + E++Q
Sbjct: 61 KKIQQLKRLNIEPYIVFDGDSLLVKSHTEARRKRKRLENEVIAKKLWSAGDKFNAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I + ++ Y+VAP+EAD QM +L ++ +I+EDSDL+ FGC
Sbjct: 121 KSVDVTPEMAKCIIDYCQTHSIPYVVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+I K++ G+ +E S L +N G ++Q + L+GCDY + +GL
Sbjct: 181 TLITKLNDHGEALEISRNNFSALPEN--FPLGKLSEQQFRNLVCLAGCDYTSGIWKVGLT 238
Query: 238 RAHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A ++ ++ + ++ ++ + + +++ A TF +QRV+ P + I L+C
Sbjct: 239 TAMKIVKQYSAMADILTQIERTEKFRLSKTFKQEVESANYTFLYQRVFCPSSNKITTLNC 298
Query: 297 ISDNIGN 303
I ++ N
Sbjct: 299 IPQSLIN 305
>gi|429963370|gb|ELA42914.1| hypothetical protein VICG_00229 [Vittaforma corneae ATCC 50505]
Length = 358
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 164/289 (56%), Gaps = 7/289 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLLP+L+ I+ HI + V +D +SW+H+ + +L PT +H+D M
Sbjct: 1 MGIKGLLPILRKILKKTHIGKYSNRRVGIDGHSWIHRIIPYIAADLYCNNPTQKHLDLFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+++ L YG+ PI +FDG L K + +R + R++ A + + E +
Sbjct: 61 AKLSGLLDYGITPIFVFDGDFLESKKKTIQERKQLREKYRAEVDFFLQRNDVPRARELMK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ V ++P I H +++VLK N+ +IV+PYEADAQ+ FL K ++ ++TEDSDL+ +G +
Sbjct: 121 RCVSVTPEILHSILRVLKANNIEFIVSPYEADAQLYFLQRIKYIDYILTEDSDLVVYGAT 180
Query: 181 RIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
RI++K D G V E+ + L KD F ++ +L++CILSGCDYL S+ G+G+ A
Sbjct: 181 RILYKYD--GVHVEEYDSARLHLCKDKYF----QENILDICILSGCDYLDSIRGIGIVTA 234
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+ + + D + + +VP Y F KA TF H VY+P T
Sbjct: 235 YEKLKELGDVDSFVNSMISLKKNVPKEYISDFVKAKATFLHHIVYNPYT 283
>gi|256271259|gb|EEU06336.1| Din7p [Saccharomyces cerevisiae JAY291]
Length = 430
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 171/307 (55%), Gaps = 6/307 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK I + +K+ +A+D Y+WLH+ + +C+ EL PT++++ + +
Sbjct: 1 MGIPGLLPQLKRIQKQVSLKKYMYQTLAIDGYAWLHRASCACAFELVMNKPTNKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL+ +KP ++FDG L +K E +R + R EN A + S GN + E++Q
Sbjct: 61 KRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VDI+P +A +I K ++ YIVAP+EAD QM +L ++ +I+EDSDL+ FGC
Sbjct: 121 KSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+I K++ G+ +E S L +N G ++Q L + L+GCDY + +G+
Sbjct: 181 TLITKLNDQGKALEISKDDFSALPEN--FPLGELSEQQFLNLVCLAGCDYTSGIWKVGVV 238
Query: 238 RAHALISKFKSY-DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A ++ ++ D +I+ + + +++ A FQ+QRV+ P + I L+
Sbjct: 239 TAMKIVKRYSEMKDILIQIERTEKLCFSKAFKQQVEFANYAFQYQRVFCPLSNQITTLNN 298
Query: 297 ISDNIGN 303
I + N
Sbjct: 299 IPKAVTN 305
>gi|401841841|gb|EJT44166.1| DIN7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 430
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 174/307 (56%), Gaps = 6/307 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK+I +++K+ +AVD Y+WLH+ + +C+ +L PT++++ + +
Sbjct: 1 MGIPGLLPHLKTIQKQVNLKKYMHQTLAVDGYAWLHRASCACAFDLVMNRPTNKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++ L+ ++P ++FDG L +K E +R R R EN A + S G+ + E++Q
Sbjct: 61 KKIQQLKRLNIEPYIVFDGDSLLVKSHTEARRKRKRLENEVIAKKLWSAGDKFNAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VD++P +A +I + ++ Y+VAP+EAD QM +L ++ +I+EDSDL+ FGC
Sbjct: 121 KSVDVTPEMAKCIIDYCQTHSIPYVVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+I K++ G+ +E S L +N G ++Q + L+GCDY + +GL
Sbjct: 181 TLITKLNDHGEALEISRNNFSALPEN--FPLGKLSEQQFRNLVCLAGCDYTSGIWKVGLT 238
Query: 238 RAHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A ++ ++ + ++ ++ + + +++ A TF +QRV+ P + I L+C
Sbjct: 239 TAMKIVKQYSAMADILTQIERTEKFRLSKTFKQEVEFANYTFLYQRVFCPSSNKITTLNC 298
Query: 297 ISDNIGN 303
I ++ N
Sbjct: 299 IPQSLIN 305
>gi|339239601|ref|XP_003381355.1| putative translation initiation factor IF-2 [Trichinella spiralis]
gi|316975619|gb|EFV59029.1| putative translation initiation factor IF-2 [Trichinella spiralis]
Length = 1569
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 188/363 (51%), Gaps = 41/363 (11%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LLP++K+ ++I+E G VAVD WLH+ C+ +L G+ T ++ +C
Sbjct: 314 MGIKTLLPVVKAACRDVNIEEFRGKTVAVDASCWLHRALFGCAYQLATGIETDSYVKFCC 373
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L Y ++ I++FDG +P K + N R R+ + G + + +Q
Sbjct: 374 KWIKVLLSYNIRVIMVFDGRNVPAKKDTNNARKERRQSLKEKGQALSKSGKHREARQCFQ 433
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A +I+ ++I + NV Y+VAPYEADAQ+ +LA + VI+EDSDLIPFGCS
Sbjct: 434 QATEIT----FDMIAIKSIPNVDYLVAPYEADAQLAYLAQNGIAHLVISEDSDLIPFGCS 489
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCI-LSGCDYLQSLPGMGLKRA 239
+++FKMD G GV ++ +++ L M + CDYL++LPG+G+K++
Sbjct: 490 KVLFKMDMLGNGVLYE---------------KEKLHLAMNVPEESCDYLENLPGIGIKKS 534
Query: 240 HALISKF------KSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVH 293
K K+ K+ +L + V Y E F +A F +Q V+DP+ + +V
Sbjct: 535 IKFFQKAFDVDIRKALPKIPSYLNMPNLEVNESYIERFIEAENAFLYQLVFDPRKKQLVS 594
Query: 294 LSCISDNIGNDLDF----------LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLK 343
L+ + N DF +A IA G ++P T Q VS+ S LV + S K
Sbjct: 595 LNAYPVGM-NASDFPYAGLVFEKHVAIQIARGMINPHT---LQHVSEISGLVPNKKSP-K 649
Query: 344 NFK 346
N K
Sbjct: 650 NIK 652
>gi|281202270|gb|EFA76475.1| 5'3'-exonuclease N- and I-domain-containing protein
[Polysphondylium pallidum PN500]
Length = 188
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 124/182 (68%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL LL + IHI E +A+D Y WLHK SCS+ELC +PT++ I+YC+
Sbjct: 1 MGIAGLLKLLSPVTKRIHISEYANKRIAIDGYCWLHKAVYSCSQELCMNIPTTKFINYCI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+N+L+ V P+++FDGG LP K E++R R+ A A EGN++ + +Q
Sbjct: 61 SLINMLKQNKVIPVIVFDGGALPNKKVTEDERRGKREHMKAMAHAYLMEGNAAEANRCFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAVD++P++A LI+VL+Q N+ Y+VAPYEADAQ+ +LAV+ QV+AV+TEDSDL+ +G
Sbjct: 121 KAVDVTPTMAFLLIKVLRQMNIEYLVAPYEADAQLAYLAVTGQVDAVLTEDSDLVAYGTP 180
Query: 181 RI 182
+
Sbjct: 181 NV 182
>gi|340055345|emb|CCC49658.1| putative exonuclease, fragment, partial [Trypanosoma vivax Y486]
Length = 457
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 173/337 (51%), Gaps = 45/337 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALS---------------CSRE 45
MGI+GL P ++ + HI + G VAVD Y WLH+G + C+
Sbjct: 1 MGIKGLWPEVRPVCHKAHISQFRGQSVAVDMYVWLHRGIIGSIEVHSVADFESLSQCTDS 60
Query: 46 L------------------CKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIE 87
L C +R + Y R+ LL GVKP+L+FDG +PMK E
Sbjct: 61 LSGPSSTPPASGAEVASQECLIPVNTRILCYVTDRLELLLRCGVKPVLVFDGAPIPMKHE 120
Query: 88 QENKRARSRKENLARAIECESEGNSSASYEF------YQKAVDISPSIAHELIQVLKQQN 141
E KR ++R +A++ G+SS S + +KA++IS +AH +I +L+ +
Sbjct: 121 TEIKRRQNRAAYFDKALQL-MRGSSSTSRSWREVVTLLEKAMNISTELAHIVILLLQDRR 179
Query: 142 VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
+ IVAPYEADAQ+ +L V+AVITEDSDLI + C +I K+D G L+
Sbjct: 180 MECIVAPYEADAQLAYLCRKGYVQAVITEDSDLIAYHCPCLIAKLDSKGNCEVLNVQDLR 239
Query: 202 KNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYS-- 259
+ + +F G + Q L CILSGCDYL +LPG+G+K+A ++ K S +I LK
Sbjct: 240 RCE--TFAGLSYQAFLVGCILSGCDYLPNLPGIGVKKAFDVVKKADSISAIIYKLKMKHG 297
Query: 260 -TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
T YE + +A F H V+DP + ++HL+
Sbjct: 298 FTEEEIRQYEVNLRRAYYCFAHHFVFDPNSRKVLHLT 334
>gi|349577319|dbj|GAA22488.1| K7_Din7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 430
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 170/307 (55%), Gaps = 6/307 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK I + +K+ +A+D Y+WLH+ + +C+ EL PT++++ + +
Sbjct: 1 MGIPGLLPQLKRIQKQVSLKKYMYQTLAIDGYAWLHRASCACAFELVMNKPTNKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL+ +KP ++FDG L +K E +R + R EN A + S GN + E++Q
Sbjct: 61 KRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYKAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VDI+P +A +I K ++ YIVAP+EAD QM +L ++ +I+EDSDL+ FGC
Sbjct: 121 KSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+I K++ G+ +E S L +N G ++Q + L+GCDY + +G+
Sbjct: 181 TLITKLNDQGKALEISKDDFSALPEN--FPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 238 RAHALISKFKSY-DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A ++ ++ D +I+ + + +++ A FQ+QRV+ P + I L+
Sbjct: 239 TAMKIVKRYSEMKDILIQIERTEKLCFSKAFKQQVEFANYAFQYQRVFCPLSNQITTLNN 298
Query: 297 ISDNIGN 303
I + N
Sbjct: 299 IPKAVTN 305
>gi|323305497|gb|EGA59240.1| Din7p [Saccharomyces cerevisiae FostersB]
Length = 430
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 170/307 (55%), Gaps = 6/307 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK I + +K+ +A+D Y+WLH+ + +C+ EL PT++++ + +
Sbjct: 1 MGIPGLLPQLKRIQKQVSLKKYMYQTLAIDGYAWLHRASCACAFELVMNKPTNKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL+ +KP ++FDG L +K E +R + R EN A + S GN + E++Q
Sbjct: 61 KRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VDI+P +A +I K ++ YIVAP+EAD QM +L ++ +I+EDSDL+ FGC
Sbjct: 121 KSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+I K++ G+ +E S L +N G ++Q + L+GCDY + +G+
Sbjct: 181 TLITKLNDQGKALEISKDDFSALPEN--FPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 238 RAHALISKFKSY-DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A ++ ++ D +I+ + + +++ A FQ+QRV+ P + I L+
Sbjct: 239 TAMKIVKRYSEMKDILIQIERTEKLCFSKAFKQQVEFANYAFQYQRVFCPLSNQITTLNN 298
Query: 297 ISDNIGN 303
I + N
Sbjct: 299 IPKAVTN 305
>gi|440292196|gb|ELP85438.1| exodeoxyribonuclease, putative [Entamoeba invadens IP1]
Length = 516
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 190/351 (54%), Gaps = 20/351 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGL + ++ + +L+ VA+D Y+ LH+GA ++ LC+G + +Y M
Sbjct: 1 MGIQGLRKEVTESLVTRKLSDLKHTRVAIDGYALLHRGAYKDAKTLCEGKDSQFLSEYIM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
L+ + PI +FDG LP K E++R +SR L +A + E G + S ++Y
Sbjct: 61 KVAQCLQSCQITPIFVFDGAELPSKKMTEDERKKSRDCALEKAKQLEDSGLVNDSEKYYN 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
KAV+I P +A I+ L++ V IVAPYEAD+++ +L+ V+AV+ EDSDLI GC
Sbjct: 121 KAVEIKPWMATAAIKSLREIGVESIVAPYEADSELGYLSKIGYVDAVLCEDSDLIVHGCK 180
Query: 181 RIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+ F + + V EF ++ G +++ L+ +C+ +GCDY +SL G+G+K+A
Sbjct: 181 RVWFGFNLSEETVKEFT---IENFAHTELGQLSREKLVYLCVFAGCDYCKSLRGVGIKKA 237
Query: 240 HALISKFKSYDKVIKHLKYSTVSV-------PPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
L++ +KV+ + T Y E+ AV TF + VYDP +E+IV
Sbjct: 238 LKLVTSAVDIEKVLDKMVNETFKYQFNDNEEKRKYLENVRDAVFTFNYAYVYDPISENIV 297
Query: 293 HLSCISDN--------IGNDL-DFLAKGIAIGDLDPFTQLPFQEVSDNSHL 334
+ + + ++ +G + D + K +A G+LDP T F + +++ +
Sbjct: 298 NTNEVPEDEEMNKRRLLGERIEDDIGKRVAEGELDPSTHECFDMMEESTFI 348
>gi|398366335|ref|NP_010549.3| Din7p [Saccharomyces cerevisiae S288c]
gi|2501673|sp|Q12086.1|DIN7_YEAST RecName: Full=DNA damage-inducible protein DIN7
gi|1134889|emb|CAA92581.1| unknown [Saccharomyces cerevisiae]
gi|1143552|emb|CAA62233.1| DIN7 protein [Saccharomyces cerevisiae]
gi|1226039|emb|CAA94102.1| Din7p [Saccharomyces cerevisiae]
gi|151942240|gb|EDN60596.1| DNA damage-inducible protein [Saccharomyces cerevisiae YJM789]
gi|190404789|gb|EDV08056.1| DNA damage-inducible protein DIN7 [Saccharomyces cerevisiae
RM11-1a]
gi|259145501|emb|CAY78765.1| Din7p [Saccharomyces cerevisiae EC1118]
gi|285811283|tpg|DAA12107.1| TPA: Din7p [Saccharomyces cerevisiae S288c]
gi|365766343|gb|EHN07841.1| Din7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300379|gb|EIW11470.1| Din7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 430
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 170/307 (55%), Gaps = 6/307 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK I + +K+ +A+D Y+WLH+ + +C+ EL PT++++ + +
Sbjct: 1 MGIPGLLPQLKRIQKQVSLKKYMYQTLAIDGYAWLHRASCACAFELVMNKPTNKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL+ +KP ++FDG L +K E +R + R EN A + S GN + E++Q
Sbjct: 61 KRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VDI+P +A +I K ++ YIVAP+EAD QM +L ++ +I+EDSDL+ FGC
Sbjct: 121 KSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+I K++ G+ +E S L +N G ++Q + L+GCDY + +G+
Sbjct: 181 TLITKLNDQGKALEISKDDFSALPEN--FPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 238 RAHALISKFKSY-DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A ++ ++ D +I+ + + +++ A FQ+QRV+ P + I L+
Sbjct: 239 TAMKIVKRYSEMKDILIQIERTEKLCFSKAFKQQVEFANYAFQYQRVFCPLSNQITTLNN 298
Query: 297 ISDNIGN 303
I + N
Sbjct: 299 IPKAVTN 305
>gi|407040925|gb|EKE40417.1| exonuclease, putative [Entamoeba nuttalli P19]
Length = 486
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 206/416 (49%), Gaps = 32/416 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LLP + SI+ I + + A+D Y+ LH+ A R++ S ++ +
Sbjct: 1 MGIKQLLPFVSSIIHKSSIDKFKNKKAAIDGYALLHRIATRNPRQIVLNNDYSFIVNGML 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ + + PI +FDG LP K E +R RK + A++ E EG + ++
Sbjct: 61 EYLKFFNTHKIIPIFVFDGATLPSKKGVEEERLNRRKSAYSNALKYEKEGKQIEALVCWK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+DI+P A ++I ++ V IVAPYEADAQM +L+ + V+ VI EDSD+IP+GCS
Sbjct: 121 QAIDITPFHASKVINAFHKRGVQCIVAPYEADAQMAYLSRTGYVDVVICEDSDMIPYGCS 180
Query: 181 RIIFKMDKFGQGVE-FQCSMLQKNKDLSFG-GFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
++FK++ + +Q L K FG T L CILSGCDY Q + G+GLK+
Sbjct: 181 VVLFKLNVVSNTCDVYQAQDLPKT---PFGINITLFQLQITCILSGCDYFQGVNGIGLKK 237
Query: 239 AHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS-- 295
A ++ K+ +VI LK + +P EE A+ TF HQ +YD + + I+ L+
Sbjct: 238 ALKIVGSCKTIKQVILSLKKNYNKQLPNNLEEQLNDALFTFNHQYIYDIEEKTIIPLTDF 297
Query: 296 -------CISDNIGNDLDFLAKG----IAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKN 344
I +G LD +G IA G +DP T PF+ N+ + + +
Sbjct: 298 EGNETTELIERTLGKKLD---QGSVIQIAEGKIDPNTLEPFK----NNEI------DIFD 344
Query: 345 FKPESERKKLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDIS 400
+P E K+ P + ++ P + E+++ L GE + S IS
Sbjct: 345 LEPIPEIKQFQTPQKSPKWCVDDILKKVHPQNEENEDSNELVSGEEESKLDSQPIS 400
>gi|207346529|gb|EDZ73002.1| YDR263Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 430
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 169/307 (55%), Gaps = 6/307 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK I + +K+ +A+D Y+WLH+ + +C+ EL PT++++ + +
Sbjct: 1 MGIPGLLPQLKRIQKQVSLKKYMYQTLAIDGYAWLHRASCACAFELVMNKPTNKYLQFFI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL+ +KP ++FDG L +K E +R + R EN A + S GN E++Q
Sbjct: 61 KRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNVMEYFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K+VDI+P +A +I K ++ YIVAP+EAD QM +L ++ +I+EDSDL+ FGC
Sbjct: 121 KSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCK 180
Query: 181 RIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+I K++ G+ +E S L +N G ++Q + L+GCDY + +G+
Sbjct: 181 TLITKLNDQGKALEISKDDFSALPEN--FPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 238 RAHALISKFKSY-DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
A ++ ++ D +I+ + + +++ A FQ+QRV+ P + I L+
Sbjct: 239 TAMKIVKRYSEMKDILIQIERTEKLCFSKAFKQQVEFANYAFQYQRVFCPLSNQITTLNN 298
Query: 297 ISDNIGN 303
I + N
Sbjct: 299 IPKAVTN 305
>gi|67480609|ref|XP_655654.1| exonuclease I [Entamoeba histolytica HM-1:IMSS]
gi|56472812|gb|EAL50271.1| exonuclease I, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702067|gb|EMD42771.1| exonuclease I, putative [Entamoeba histolytica KU27]
Length = 486
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 179/342 (52%), Gaps = 22/342 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LLP + SI+ I + + A+D Y+ LH+ A R++ S ++ +
Sbjct: 1 MGIKQLLPFVSSIIHKSSIDKFKNKKAAIDGYALLHRIATRNPRQIVLNNDYSFIVNGML 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ + + PI +FDG LP K E +R RK + A++ E EG + ++
Sbjct: 61 EYLKFFNTHKIIPIFVFDGATLPSKKGVEEERLNRRKSAYSNALKYEKEGKQIEALVCWK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+DI+P A ++I ++ V IVAPYEADAQM +L+ + V+ VI EDSD+IP+GCS
Sbjct: 121 QAIDITPFHASKVINAFHKRGVQCIVAPYEADAQMAYLSRTGYVDVVICEDSDMIPYGCS 180
Query: 181 RIIFKMDKFGQGVE-FQCSMLQKNKDLSFG-GFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
++FK++ + +Q L K FG T L CILSGCDY Q + G+GLK+
Sbjct: 181 VVLFKLNVVSNTCDVYQAQDLPKT---PFGINITLFQLQITCILSGCDYFQGVNGIGLKK 237
Query: 239 AHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS-- 295
A ++ K+ +VI LK + +P EE A+ TF HQ +YD + + I+ L+
Sbjct: 238 ALKIVGSCKTIKQVILSLKKNYNKPLPNNLEEQLNDALFTFNHQYIYDIEEKTIIPLTDF 297
Query: 296 -------CISDNIGNDLDFLAKG----IAIGDLDPFTQLPFQ 326
I +G LD +G IA G +DP T PF+
Sbjct: 298 EGNETTELIERTLGKKLD---QGSVIQIAEGKIDPNTLEPFK 336
>gi|303391387|ref|XP_003073923.1| exonuclease 1 [Encephalitozoon intestinalis ATCC 50506]
gi|303303072|gb|ADM12563.1| exonuclease 1 [Encephalitozoon intestinalis ATCC 50506]
Length = 363
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 184/312 (58%), Gaps = 16/312 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSC-SRELCKGLPTSRHIDYC 59
MGI GLLP++ S ++ +HI + +D ++WL++ LSC + E+ +PT R++
Sbjct: 1 MGISGLLPIVASKLVKMHISSYRHKRLGIDGHAWLYQ-ILSCVAEEMFFRIPTKRYVSMF 59
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS-SASYEF 118
+V LL +YG+ PI++ DG LL K E+ N++ + RKE + E N + F
Sbjct: 60 EEKVKLLENYGITPIIVLDGDLLSSK-EETNRKRQIRKEKSRKEAEYWLMKNDPEKAKAF 118
Query: 119 YQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFG 178
++ + ++ + ++ ++L++ +V YI++PYE+DAQ+ +L ++ ++TEDSDLIP+G
Sbjct: 119 MRQCISVTRGVVSDITKMLERIDVEYIISPYESDAQLCYLERIGYIDYILTEDSDLIPYG 178
Query: 179 CSRIIFKMDK-FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
+RI++K D F + C + KD ++ +L++ ILSGCDYL S+ G+G+
Sbjct: 179 SNRILYKFDNTFVREFSRSCLAEVRGKDF------EENILDISILSGCDYLSSIQGVGIV 232
Query: 238 RAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
AH L+S+ ++ ++V+++LK+ VP Y + F KA TF +Q VYDP +L
Sbjct: 233 TAHKLLSRERTIERVVEYLKHRK-PVPKNYLDDFFKARKTFLYQIVYDPIERKRRYLQ-- 289
Query: 298 SDNIGNDLDFLA 309
++ +++FL
Sbjct: 290 --DVTEEMEFLG 299
>gi|260803225|ref|XP_002596491.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
gi|229281748|gb|EEN52503.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
Length = 698
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP LK +++K L G VAVD Y W+++GA +C+ +L +G + ++ + +
Sbjct: 1 MGIQGLLPFLKDASTQVNVKMLAGYTVAVDAYCWIYRGAFACAMDLARGDKSDMYVKFVL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
VN+L +G+KP+++FDG LP K E+ R ++ L + + +GN++ + E +Q
Sbjct: 61 KYVNMLLSHGIKPVIVFDGCNLPSKQGVEDSRRERKQLYLQKGKQFLRDGNTAQARECFQ 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K ++++P +AHE+++ + V IVAPYEADAQ+ +L +AVITEDSDL+ FGC
Sbjct: 121 KCINVTPQMAHEVMEACRTLGVDCIVAPYEADAQLAYLNKCGIAQAVITEDSDLLAFGCD 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNK 204
R+IFK+D G G +M++K++
Sbjct: 181 RVIFKLDLNGNG-----TMIEKHR 199
>gi|154420990|ref|XP_001583509.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
gi|121917751|gb|EAY22523.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
Length = 317
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 170/326 (52%), Gaps = 15/326 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP +K ++ HI G +A+D Y WLH+ A +C+++L + T ++YC
Sbjct: 1 MGINNLLPSVKPVVKHGHISLFSGKRIAIDGYVWLHRSAFACAKQLLEDPSTPLILNYCK 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +L+ G++P +FDG LP K E +R R+E ES+ + Y
Sbjct: 61 KNIEMLKSNGLQPYFVFDGRPLPGKAETNKERKEIREEAKKSIESGESDDQMT-----YA 115
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
K V I+ + LI LK+ + YIVAP+EADAQ+ +L + + V+TED+DLI +
Sbjct: 116 KTVTITHATVKVLIDYLKEIGIPYIVAPFEADAQLAYLCRNNYADIVLTEDTDLICYKSP 175
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+FK+D G + + + F G + + CIL Y + + MG K A
Sbjct: 176 VTLFKLDSKG-----NVDYVIYQELIDFLGLSSDQFTQFCILITDVYGKHIRMMGFKTAL 230
Query: 241 ALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ K +VI + +VP YE++F ++ L F HQ VYDP TE VHL+ ++
Sbjct: 231 DLMKKLGDAHQVIDFARSKPKFTVPEGYEQTFDQSYLIFNHQIVYDPNTESTVHLTPTTN 290
Query: 300 N---IGNDLDF-LAKGIAIGDLDPFT 321
N +G+ +D + K + G++DPFT
Sbjct: 291 NNPIMGSTMDREMLKKLVTGEIDPFT 316
>gi|260801469|ref|XP_002595618.1| hypothetical protein BRAFLDRAFT_64728 [Branchiostoma floridae]
gi|229280865|gb|EEN51630.1| hypothetical protein BRAFLDRAFT_64728 [Branchiostoma floridae]
Length = 275
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 147/266 (55%), Gaps = 7/266 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK PI+I+++ G VA+D WLH G + C++E+ G P +I Y M
Sbjct: 1 MGITGLLPELKKSTEPINIEDMTGTVVAIDASCWLHSGLIGCAKEVFLGRPVDSYIRYFM 60
Query: 61 HRVNLLRHYGVKPILIFDG-GLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
R+ +L GV P+++FDG LP K E KR + R++ A E N++
Sbjct: 61 GRIEILLRNGVTPLVVFDGRNPLPAKAELTAKRKQDRQKARTFARFALMEKNTTRFDRNC 120
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
Q +++ P + +I+ LK + V Y++APYEAD Q+ F+++S + VITEDSDL+ +G
Sbjct: 121 QDGLEVKPEMVDNVIKALKDRGVDYLMAPYEADPQLAFMSMSGAADYVITEDSDLLVYGA 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
++I+K D + + + D F FT + MCI+SGCDYL S+ +GLKRA
Sbjct: 181 KKVIYKWDGHDGQLILHHHLYRSYPD--FPQFTFEKFQHMCIISGCDYLGSIESIGLKRA 238
Query: 240 HALISKFKSYD----KVIKHLKYSTV 261
+ D ++ KHLK V
Sbjct: 239 ATFVKSVGDGDIFKTRLTKHLKTRAV 264
>gi|71413355|ref|XP_808820.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873103|gb|EAN86969.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 762
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 180/348 (51%), Gaps = 43/348 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALS---------------CSRE 45
MGI+GL ++ + H+ G VAVD Y WLH+ L C+
Sbjct: 1 MGIKGLWSEVRPVCRQSHLSNFRGQRVAVDMYVWLHRSILGSVQLGTRADAEAFIECAEM 60
Query: 46 LCKG-------LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE 98
+ L +++ + + M RV+L+ GV P+L+FDG +PMK E +R R
Sbjct: 61 TSEAVDAGSSVLLSNKFLQFVMGRVDLMLRCGVHPVLVFDGAPIPMKQGTEAERQMLRAA 120
Query: 99 NLARAIECESEGNSS------ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEAD 152
LA A++ +G S + + +K +DI+ +AH +IQVLK++ + IVAPYEAD
Sbjct: 121 RLAEALQVLKQGGPSNPRARQEAAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEAD 180
Query: 153 AQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL----SF 208
AQ+ +L V+AV++EDSDLI + C +I K+D G C +L +DL SF
Sbjct: 181 AQLAYLCKEGYVQAVVSEDSDLIAYHCPCLIAKLDAHG-----GCEVLFA-QDLPRCPSF 234
Query: 209 GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK----YSTVSVP 264
G + + L CILSGCDYL SL +G+K+A L+++ S +++ L+ +S +
Sbjct: 235 YGLSYESFLVGCILSGCDYLPSLRHIGVKKAFRLVAQATSVPSIMRSLEVKFGFSKEELD 294
Query: 265 PFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGI 312
YE +A F H V+DP ++++HL+ + I + L + +
Sbjct: 295 A-YEAKLQQAFYCFAHHFVFDPVRKEVMHLTPLPRGIPLKTNLLGEAL 341
>gi|325189982|emb|CCA24465.1| exonuclease 1 putative [Albugo laibachii Nc14]
Length = 542
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 23/319 (7%)
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE--SEG 110
+R++++ + ++ LL+ + + PI +FDG +P K + + R R R RA+ +E
Sbjct: 2 NRYLNFSIQQILLLQKHHITPIFVFDGAPVPAKADTQAMRNRKRNMWKVRALTSRKSNEA 61
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A F Q A+ ++ + LI VL++ NV Y+VAPYEADAQ+ FL+ K V+AVI+E
Sbjct: 62 DEKAKRSFTQ-AISVTNEMKLRLINVLREMNVQYLVAPYEADAQLAFLSRMKIVDAVISE 120
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
DSD I +GC I+FK G E L N+DL F +T++M + C L GCDY S
Sbjct: 121 DSDCIAYGCRTILFKWSGDGWASELNKRSLGANEDLCFVKWTEEMFVVFCALCGCDYCPS 180
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTE 289
LPG+G A+ ++ F + +++ LK S + +P Y++ AV+T++H V+DP+ E
Sbjct: 181 LPGIGPITAYKYVNTFITAPDILEELKRSDKNHLPQEYDQKLYSAVITYRHHLVFDPRKE 240
Query: 290 DIVHLSCISDN------IGNDLDFL---------AKGIAIGDLDPFTQLPFQEV----SD 330
+ L+ + + +G+DL FL A IA + P T + + +
Sbjct: 241 KLRLLNALDQSKEIVALLGSDLRFLGDVTMRHEVAASIAKAIIHPITHETYSWLDVSRQE 300
Query: 331 NSHLVVGQNSHLKNFKPES 349
GQ +++F P S
Sbjct: 301 EEATKFGQEVSIQSFSPHS 319
>gi|407867753|gb|EKG08658.1| hypothetical protein TCSYLVIO_000184 [Trypanosoma cruzi]
Length = 761
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 180/348 (51%), Gaps = 43/348 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALS---------------CSRE 45
MGI+GL ++ + H+ G VAVD Y WLH+ L C+
Sbjct: 1 MGIKGLWSEVRPVCRQSHLSNFRGQRVAVDMYVWLHRSILGSVQLGTRADAEAFIECAEM 60
Query: 46 LCKG-------LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE 98
+ L +++ + + M RV+L+ GV P+L+FDG +PMK E +R R
Sbjct: 61 TSEAVDAGSSVLLSNKFLQFVMGRVDLMLRCGVHPVLVFDGAPIPMKQGTEAERQMLRAA 120
Query: 99 NLARAIECESEGNSS------ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEAD 152
LA A++ +G S + + +K +DI+ +AH +IQVLK++ + IVAPYEAD
Sbjct: 121 RLAEALQVLKQGGPSNPRARQEAAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEAD 180
Query: 153 AQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL----SF 208
AQ+ +L V+AV++EDSDLI + C +I K+D G C +L +DL SF
Sbjct: 181 AQLAYLCKEGYVQAVVSEDSDLIAYHCPCLIAKLDAHG-----GCEVLFA-QDLPRCPSF 234
Query: 209 GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK----YSTVSVP 264
G + + L CILSGCDYL SL +G+K+A L+++ S +++ L+ +S +
Sbjct: 235 YGLSYESFLVGCILSGCDYLPSLRHIGVKKAFRLVAQATSVPIIMRSLEVKFGFSKEELD 294
Query: 265 PFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGI 312
YE +A F H V+DP ++++HL+ + I + L + +
Sbjct: 295 A-YEAKLQQAFYCFAHHFVFDPVRKEVMHLTPLPRGIPLKTNLLGEAL 341
>gi|340501880|gb|EGR28613.1| hypothetical protein IMG5_171750 [Ichthyophthirius multifiliis]
Length = 576
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 175/333 (52%), Gaps = 28/333 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GL L+K I+ ++ +L VAVD +L+KG +CS +L + T ++ Y
Sbjct: 1 MGIEGLSQLIKPILEKKYLSQLNIKSVAVDAMYFLYKGCYACSYQLNNNIETKEYMIYLF 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ LL+ Y ++PI++FDG LP K +R ++++NL A + EG S++++
Sbjct: 61 KIIKLLQFYKIEPIIVFDGRSLPAKDLTHKQRENTKQKNLDIANKLIEEGKKQESFKYFS 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ + ++ + +E+I L + ++++PYEADAQ+ F+ +A +TEDSDLI +GC
Sbjct: 121 RCLRVNKKMIYEVIDTLFHNKIKFVISPYEADAQIAFMVRKGITDAAVTEDSDLICYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLE---------------MCILSGC 225
R+IFK+ G C L NK K + E +CI++G
Sbjct: 181 RVIFKLKLDG-----SCEYLDLNKYTENQALRKTIQCESLRCFLAQSENNRILICIMAGS 235
Query: 226 DYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYS-TVSVPPFYEESFGKAVLTFQHQRVY 284
DY+ S+ G+G+K+A L + ++ V++ L+ +P YEE K L F+HQ V+
Sbjct: 236 DYIPSIHGIGIKKAIDLFYRLNNFQSVMRKLRVELKFDIPQKYEEMVQKVSLIFKHQLVF 295
Query: 285 DPKTEDIVHLSCISDNIGNDL---DFLAKGIAI 314
D + + + ++ + +G+D D GI I
Sbjct: 296 DFQEKILTYI----NELGSDFKKEDLRQIGIKI 324
>gi|71423277|ref|XP_812404.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877180|gb|EAN90553.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 760
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 179/346 (51%), Gaps = 43/346 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALS------------------- 41
MGI+GL ++ + H+ G VAVD Y WLH+ L
Sbjct: 1 MGIKGLWSEVRPVCRQSHLSNFRGQRVAVDMYVWLHRSILGSVQLGTRADAEAFIESAEM 60
Query: 42 CSRELCKG---LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE 98
S + G L +++ + + M RV+L+ GV P+L+FDG +PMK E +R R
Sbjct: 61 TSEAVDAGSSVLLSNKFLQFVMGRVDLMLRCGVHPVLVFDGAPIPMKQGTEAERQMLRAA 120
Query: 99 NLARAIECESEGNSS------ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEAD 152
LA A++ +G S + + +K +DI+ +AH +IQVLK++ + IVAPYEAD
Sbjct: 121 RLAEALQVLKQGGPSNPRARQEAAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEAD 180
Query: 153 AQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL----SF 208
AQ+ +L V+AV++EDSDLI + C +I K+D G C +L +DL SF
Sbjct: 181 AQLAYLCKEGYVQAVVSEDSDLIAYHCPCLIAKLDAHG-----GCEVL-FAQDLPRCPSF 234
Query: 209 GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK----YSTVSVP 264
G + + L CILSGCDYL SL +G+K+A L+++ S +++ L+ +S +
Sbjct: 235 YGLSYESFLVGCILSGCDYLPSLRHIGVKKAFRLVAQATSVPSIMRSLEVKFGFSKEELD 294
Query: 265 PFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAK 310
YE +A F H V+DP ++++HL+ + I + L +
Sbjct: 295 A-YEAKLQQAFYCFAHHFVFDPVRKEVMHLTPLPRGIPLKTNLLGE 339
>gi|58262688|ref|XP_568754.1| exonuclease [Cryptococcus neoformans var. neoformans JEC21]
gi|57223404|gb|AAW41447.1| exonuclease, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1012
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 89/338 (26%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLPLLK + + HI E +G + ++Y M
Sbjct: 1 MGISGLLPLLKEVSVHGHISEFKG----------------------------KKFVEYAM 32
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+RV LRH+G++P L+FDGG LP K E RA++R ENL +A E++G + E Y
Sbjct: 33 YRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKTRLENLEKARSLEAQGRMKEAKEAYT 92
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ VD++P +A++LI+V
Sbjct: 93 RCVDVTPEMAYQLIKV-------------------------------------------- 108
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
IFK+DK GQ V L ++ G+T M +LSGCDYL S+PG+G+K AH
Sbjct: 109 --IFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRMAMLSGCDYLDSIPGIGIKTAH 166
Query: 241 ALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
L+ +F S +K+++H++ T VPP Y F +A L F +QRVYDP +VHL+ +
Sbjct: 167 RLMRRFNSVEKLLQHIRLEGTYLVPPTYLSDFAQAELAFLYQRVYDPSLGRLVHLNPLPP 226
Query: 300 N-------------IGNDL-DFLAKGIAIGDLDPFTQL 323
+G D+ + LA+ +A GD+ P T +
Sbjct: 227 ASTGFQLGDEGEKWVGVDVEEGLARRMARGDVHPETGM 264
>gi|407394233|gb|EKF26855.1| hypothetical protein MOQ_009436 [Trypanosoma cruzi marinkellei]
Length = 772
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 178/348 (51%), Gaps = 43/348 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSC--------------SREL 46
MGI+GL ++ + H+ G VAVD Y WLH+G L S E+
Sbjct: 1 MGIKGLWSEVRPVCRQSHLSNFRGQRVAVDMYVWLHRGILGSVQLGTSADAEAFMESAEM 60
Query: 47 CKG--------LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE 98
L + + + + + RV+L+ GV P+L+FDG +PMK E +R R
Sbjct: 61 TSEAADVGGSVLLSYKFLQFVVGRVDLMLRCGVHPVLVFDGASIPMKQGTEAERQMLRAA 120
Query: 99 NLARAIECESEGNSS------ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEAD 152
LA A++ +G S + + +K +DI+ +AH +IQVLK++ + IVAPYEAD
Sbjct: 121 RLAEALQVLKQGGPSNPRARQEAAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEAD 180
Query: 153 AQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL----SF 208
AQ+ +L V+AV++EDSDLI + C +I K+D G C +L +DL SF
Sbjct: 181 AQLAYLCKEGYVQAVVSEDSDLIAYHCPCLIAKLDAHG-----GCEVL-FAQDLPRCPSF 234
Query: 209 GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK----YSTVSVP 264
G + + L CILSGCDYL SL +G+K+A L+++ S +++ L+ +S +
Sbjct: 235 YGLSYESFLVGCILSGCDYLPSLRHIGVKKAFRLVAQATSVPSIMRSLEVKFGFSKEELD 294
Query: 265 PFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGI 312
YE +A F H V+DP +++ HL+ + I L + +
Sbjct: 295 A-YEAKLQQAFYCFAHHFVFDPVRKEVKHLTPLPRGIPLKTSLLGEAL 341
>gi|118398554|ref|XP_001031605.1| XPG I-region family protein [Tetrahymena thermophila]
gi|89285936|gb|EAR83942.1| XPG I-region family protein [Tetrahymena thermophila SB210]
Length = 648
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/563 (26%), Positives = 271/563 (48%), Gaps = 63/563 (11%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGL L+K + + + +G A+D S+L+KG S +L KG T ++ + +
Sbjct: 31 MGIQGLQNLIKPALEFTSLHQFKGQKAAIDAMSFLYKGCYGYSYQLNKGEQTREYMLFLL 90
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V +++ G++PI++FDG L K KR ++++NL +A E +GN + + ++YQ
Sbjct: 91 RIVRVVKLNGIEPIVVFDGRNLKAKDFTIKKREETKEKNLQKANELMEQGNKNEAIKYYQ 150
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ + ++ + ++ I +L+ N+ Y+++PYEAD+Q+ +L S+Q + ITEDSDLI + C
Sbjct: 151 RCLRVNKEMIYDTIDMLRANNIEYLISPYEADSQVAYLVKSQQADFAITEDSDLICYSCP 210
Query: 181 RIIFK--MDKFGQGVEF----QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+I+FK +D Q ++ + S LQ F + + +CI++G DY S+ G+
Sbjct: 211 KIVFKLSLDSSCQYLDLLKYCERSNLQSEALRCFLSQNELNRIYICIMAGSDYFPSIQGI 270
Query: 235 GLKRAHALISKFKSYDKVIKHLKYSTVS---VPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+K+A L + ++ V++ L+ +P Y+ K L F++QRV+D T+ +
Sbjct: 271 GIKKAIDLFYRCGTFKNVMQKLRLEPKIRPLIPENYDMFVEKVALIFRYQRVFDMNTKQL 330
Query: 292 VHLSCISDNIGNDLDFLAKGIAIGDLDPFTQLP-FQEVSDN-SHLVVGQNSHLKN----- 344
+ L+ + ++ + + L IG+ Q+P F EVS H+ + L
Sbjct: 331 ITLNPVPEDFSQEDERL-----IGE-----QIPHFDEVSQGLRHIYSLEKRELVEIDMKT 380
Query: 345 -FKPESERKKLDLPVQKNLLTKKFT-------TPRISPNHFS-----------PEETSSL 385
F +SE+KK + Q N F+ ++ N + P+E L
Sbjct: 381 YFTSKSEKKKFIIQAQNNSTNNDFSNLQQTNENEKLHYNQYQVNSDQIKKLLKPQEVQQL 440
Query: 386 SPGEHHTAE---ASCDISCQSSSRMELETVGNFPHN-SSEKNCFASEVPEFSASPSREME 441
+ E D + + N N + E FA + S +++
Sbjct: 441 QELKKKQEEELYELIDTYNEELGDFNFDNANNQDENPNGEDENFAKFGQSYLYSDDFQIQ 500
Query: 442 NERNAEHTSLPQFCRSIRNPCPALRKEHEN--KNCTDSVVGKGRTENRKVIVRSSYFLHK 499
+ N+++TS + N C + ++++ KN DS V R + + V SS +
Sbjct: 501 KKNNSDYTSY------LENLCNSFLQDYQQFLKN-EDSQV---RVQTQIVRRASSNLNEQ 550
Query: 500 QVNKD--DQENKQEKLVVENDAA 520
Q N+D +QEN+ +K ++ N A
Sbjct: 551 QENQDINNQENQNKKTILHNPFA 573
>gi|405118233|gb|AFR93007.1| exonuclease [Cryptococcus neoformans var. grubii H99]
Length = 997
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 146/278 (52%), Gaps = 60/278 (21%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
M+RV LRH+G++P L+FDGG LP K E RA+SR +NL +A E++G + E Y
Sbjct: 1 MYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKSRSDNLEKARSLEAQGRIKEAKEAY 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
+ VD++P +A++LI+ L+ +NV Y+VAPYEADAQ+ F
Sbjct: 61 TRCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQLCF---------------------- 98
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
L++ + G+T M +LSGCDYL S+PG+G+K A
Sbjct: 99 --------------------LEREGEFPMHGWTDMHFRRMAMLSGCDYLNSIPGIGIKTA 138
Query: 240 HALISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
H L+ +F S +++H++ T VPP Y F +A L F +QRVYDP +VHL+ +
Sbjct: 139 HRLMRRFNS---LLQHIRLEGTYLVPPTYLSDFAQAELAFLYQRVYDPSLGRLVHLNPLP 195
Query: 299 DN-------------IGNDL-DFLAKGIAIGDLDPFTQ 322
+G D+ + LA+ +A GD+ P T+
Sbjct: 196 PTGSGFQLGEEGEKWVGVDVEEELARRMARGDVHPETR 233
>gi|440491647|gb|ELQ74269.1| 5'-3' exonuclease [Trachipleistophora hominis]
Length = 441
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 169/306 (55%), Gaps = 9/306 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+GLLP++ + HI + + +D +SWLH S + +L + T+ H + +
Sbjct: 1 MGIKGLLPIVSPCLKKRHISSFKNHRIGIDGHSWLHSILPSIALQLYNNVQTTLHHEIFL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE-SEGNSSASYEFY 119
RV +++ YG P+++FDG LP K N+R R ++E E + S+GN + +
Sbjct: 61 KRVRVIQKYGAVPVVVFDGESLPSK-HVVNERRRMKREEARTMAELQMSKGNVREAMRYI 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ ISP + ++ Q L+ V IV+PYE+DAQ+ +L V ++ITEDSDLI + C
Sbjct: 120 ACSISISPHMVAQIAQFLRDNGVEVIVSPYESDAQLAYLQRINYVHSIITEDSDLIVYKC 179
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+ +++ K+G G ++ + F LL++ ILSGCDYL+++ G+G+ A
Sbjct: 180 NNVLY---KYGNGYVMH---YERGAFRTANEFVCDNLLDVSILSGCDYLENVRGVGISSA 233
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD 299
++ ++ S + VI ++ T SVP Y F +A LTF++Q VYDP + V+L +
Sbjct: 234 VKMMRRYGSVELVINEMR-RTRSVPEDYLSCFVRARLTFKYQVVYDPVRNERVYLDGSRN 292
Query: 300 NIGNDL 305
G D
Sbjct: 293 EKGYDF 298
>gi|269861368|ref|XP_002650394.1| exonuclease I [Enterocytozoon bieneusi H348]
gi|220066165|gb|EED43662.1| exonuclease I [Enterocytozoon bieneusi H348]
Length = 327
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 162/289 (56%), Gaps = 12/289 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP LK+I+ I E G +A+D +SW+H+ S EL + T +HI
Sbjct: 1 MGITGLLPFLKNIIKKKTIDEFHGSRIAIDGFSWIHRIGTHVSYELYNSIKTDKHIKIFR 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARA-IECESEGNSSASYEFY 119
+ L H + PI I DG L K+ N R +++ L++ I E+ N+ A +
Sbjct: 61 SELVALIHKNIIPIFILDGDKLDSKLITYNHRQNLKEKYLSQLKIAIENHDNTRAR-DLM 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ V I+P ++ I+ L+ V YI+APYEAD+QM +L V+ +++EDSDLI +G
Sbjct: 120 KRVVTITPDFIYDFIKELEILQVEYIIAPYEADSQMAYLNKINYVDHIMSEDSDLICYGA 179
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLS--FGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
++FK + G V+ K++DLS +G F + +L++CILSGCDY+ S+ G+GL
Sbjct: 180 KSVLFKYN--GIFVDH-----YKSEDLSKAYGSFFAKNILDICILSGCDYINSIKGIGLI 232
Query: 238 RAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
A L K K+ +K + L + ++P Y E F +A TF + VY+P
Sbjct: 233 TAVKLFQKEKTVEKFVTSLAHKK-TIPSDYIEQFYQAKKTFLYHIVYNP 280
>gi|167540345|ref|XP_001733569.1| exonuclease [Entamoeba dispar SAW760]
gi|165893427|gb|EDR21684.1| exonuclease, putative [Entamoeba dispar SAW760]
Length = 532
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 172/332 (51%), Gaps = 16/332 (4%)
Query: 7 LPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLL 66
LP + SI+ I + + A+D Y+ LH+ A R++ ++ + +
Sbjct: 53 LPFVSSIIHKSSIDKFKNKKAAIDGYALLHRIATRNPRQVVVNNDYFFIVNGMLEYLKFF 112
Query: 67 RHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDIS 126
+ + PI +FDG LP K E +R + RK + A++ E EGN + +++A+DI+
Sbjct: 113 NIHKIIPIFVFDGATLPSKKLIEEERLKRRKSAYSNALKYEKEGNQIEALICWKQAIDIT 172
Query: 127 PSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM 186
P A ++I ++ V IVAPY ADAQM +L+ + V+ VI EDSD+IP+GCS ++FK+
Sbjct: 173 PFHASKVINAFHKRGVQCIVAPYGADAQMAYLSRTGYVDVVICEDSDMIPYGCSVVLFKL 232
Query: 187 DKFGQGVE-FQCSMLQKNKDLSFGGFTKQMLLEM-CILSGCDYLQSLPGMGLKRAHALIS 244
+ + +Q L K FG L++ CILSGCDY Q + G+GLK+A ++
Sbjct: 233 NIVSNICDVYQAQDLPKT---PFGINVTLFQLQITCILSGCDYFQGINGIGLKKALKIVG 289
Query: 245 KFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGN 303
K+ +VI LK + +P EE A+ TF HQ +YD + + I+ L+ N N
Sbjct: 290 SCKTIKQVISSLKKNYKKPLPNNLEEDLNDALFTFNHQYIYDIEEKTIIPLTDFEGNETN 349
Query: 304 DLDFLAKG----------IAIGDLDPFTQLPF 325
+L G IA G +DP T PF
Sbjct: 350 ELIERTLGKKLDQGVIVQIAEGKIDPNTLEPF 381
>gi|156039401|ref|XP_001586808.1| hypothetical protein SS1G_11837 [Sclerotinia sclerotiorum 1980]
gi|154697574|gb|EDN97312.1| hypothetical protein SS1G_11837 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 743
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 148/251 (58%), Gaps = 10/251 (3%)
Query: 85 KIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSY 144
K E R + R+++ + + G +S +Y +QKAVD++P +A +I LK+ V Y
Sbjct: 58 KAATEKDREKRREDSKRIGQDLLNAGKTSQAYLEFQKAVDVTPEMARHVIDELKEMGVQY 117
Query: 145 IVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNK 204
IVAPYEADAQM +L ++ +++EDSDL+ FG ++ K+D++G +E + K
Sbjct: 118 IVAPYEADAQMVYLERQGIIDGILSEDSDLLVFGAKCLLTKLDQYGNCIEVNKADFCACK 177
Query: 205 DLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKY-STVSV 263
D++ G++ M ILSGCDYL S+ +GLK A+ L+ K K+ +KV++ +++ V
Sbjct: 178 DVNLTGWSDAEFRRMAILSGCDYLASMSNIGLKTAYRLVRKHKTIEKVVRMIQFDGKFHV 237
Query: 264 PPFYEESFGKAVLTFQHQRVYDPKTEDIV-----HLSCISDN---IGNDLDF-LAKGIAI 314
P Y ESF +A TF HQRV+ P+T +V + D IG+D+ +A+G+A
Sbjct: 238 PKNYLESFYQAEFTFLHQRVFCPRTLKLVLHTQPGIPLTEDQTQFIGHDVSPEIARGVAK 297
Query: 315 GDLDPFTQLPF 325
GDL+P T+ P
Sbjct: 298 GDLNPITKQPI 308
>gi|294918871|ref|XP_002778492.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239886936|gb|EER10287.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 674
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 188/340 (55%), Gaps = 46/340 (13%)
Query: 1 MGIQGLLPLLKS-IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYC 59
MG++ LL LK + +I + +G V +D W+H+GA++C EL G + + + +
Sbjct: 1 MGVKNLLQHLKGCTAMKQNISDFKGKRVGIDAMCWMHRGAIACCFELVSGRESDKFLTFF 60
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK--ENLARAIECESEGNSSASYE 117
+ + LL+ Y V P+++FDG +P K E+E KR SR+ + A+A+ ES G + AS
Sbjct: 61 LRMIALLQGYDVTPVVVFDGCRMPGKAEEEKKRGESRETAADSAKAM-IESLGITQASQM 119
Query: 118 FYQ------KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +AV I+ + +++ LK V +IVA YEADAQ+ ++ + V+AVI+ED
Sbjct: 120 TSEVRSKCMQAVRITKEMIQKVMCALKALGVEFIVAAYEADAQLGYMYSAGLVDAVISED 179
Query: 172 SDLIPFGCSRIIFKMDKFG--QGVEFQCSML-----------QKNKDLSF-------GG- 210
SD++P+GC +I K+D+ G Q V+ ++ Q+++ LSF G
Sbjct: 180 SDVLPYGCKVMIAKLDQAGDCQVVDISWALKGGSKLKEKSNEQEDQRLSFRELRDKYGAD 239
Query: 211 ------FTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHLKY---- 258
+TK++ ++ C+L+GCDY + L GMG+K A L++K++++ + ++ LK
Sbjct: 240 LANLRDWTKEVFIDACVLAGCDYSHACNLSGMGIKTAMKLVNKYRNWQRTLRALKIEDKF 299
Query: 259 -STVSVPPF--YEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
++ F + ++F A F RV+DP+T+ + ++
Sbjct: 300 RKQLAYEKFETFRKNFELARAVFFFHRVFDPRTKRCITMT 339
>gi|323309724|gb|EGA62931.1| Din7p [Saccharomyces cerevisiae FostersO]
Length = 408
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 156/281 (55%), Gaps = 6/281 (2%)
Query: 27 VAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKI 86
+A+D Y+WLH+ + +C+ EL PT++++ + + R+ LL+ +KP ++FDG L +K
Sbjct: 5 LAIDGYAWLHRASCACAFELVMNKPTNKYLQFFIKRLQLLKRLKIKPYIVFDGDSLFVKN 64
Query: 87 EQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIV 146
E +R + R EN A + S GN + E++QK+VDI+P +A +I K ++ YIV
Sbjct: 65 HTETRRRKKRLENEMIAKKLWSAGNRYNAMEYFQKSVDITPEMAKCIIDYCKLHSIPYIV 124
Query: 147 APYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEF---QCSMLQKN 203
AP+EAD QM +L ++ +I+EDSDL+ FGC +I K++ G+ +E S L +N
Sbjct: 125 APFEADPQMVYLEKMGLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDFSALPEN 184
Query: 204 KDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSY-DKVIKHLKYSTVS 262
G ++Q + L+GCDY + +G+ A ++ ++ D +I+ + +
Sbjct: 185 --FPLGELSEQQFRNLVCLAGCDYTSGIWKVGVVTAMKIVKRYSEMKDILIQIERTEKLC 242
Query: 263 VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGN 303
+++ A FQ+QRV+ P + I L+ I + N
Sbjct: 243 FSKAFKQQVEFANYAFQYQRVFCPLSNQITTLNNIPKAVTN 283
>gi|308461453|ref|XP_003093019.1| CRE-EXO-1 protein [Caenorhabditis remanei]
gi|308251938|gb|EFO95890.1| CRE-EXO-1 protein [Caenorhabditis remanei]
Length = 637
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 158/309 (51%), Gaps = 31/309 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP +K+ +I EL G VA+D LH+G C ++ G T +I+Y
Sbjct: 1 MGITGLLPFVKNACRKGNILELRGKSVAIDVSCLLHRGLTGCMDKIHMGEETKSYINYVD 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V L G +++FDG LP K + R R++ +A ++G + + Y+
Sbjct: 61 KYVKELLAMGCHVVMVFDGRPLPAKKGTNDDRREQREKRKEQAEMLLAKGKEREARDTYR 120
Query: 121 KAVDISPSIAHELIQVLKQ-QNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
A IS I + I+ ++ NV +VAPYEADAQ+ +L SK V+AVITEDSDLI FGC
Sbjct: 121 LATSISTEIVEKTIEFFRKIPNVDIVVAPYEADAQLAYLMESKLVDAVITEDSDLIVFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQK-NKDLSFGG------FTKQMLLEMCILSGCDYLQS-L 231
I FK Q +CS+ +K N F G F +CILSGCDYLQS L
Sbjct: 181 EMIYFKW----QSATGECSVYEKCNLKKCFTGELGGDKFDFSKFRRICILSGCDYLQSGL 236
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPF-------------YEESFGKAVLTF 278
PG+GL A +KF S IK L+ VP + + SF +A TF
Sbjct: 237 PGVGLSTA----AKFFSLTS-IKDLRTVLRKVPSYLKNPKLKEHVTEEFIRSFARAENTF 291
Query: 279 QHQRVYDPK 287
+HQ V+DP+
Sbjct: 292 KHQIVFDPR 300
>gi|342182627|emb|CCC92106.1| putative exonuclease [Trypanosoma congolense IL3000]
Length = 783
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 170/336 (50%), Gaps = 50/336 (14%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCS-----------RELCKG 49
MGI+GL +K + H+ + G VAVD Y WLH+G + R K
Sbjct: 1 MGIKGLWSEVKPVCQRSHLSKFRGQRVAVDMYVWLHRGIIGSVELGTEADIEEFRSYAKS 60
Query: 50 LPTS-------------RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSR 96
L S R + M RV+LL G+ P+L+FDG +PMK +E +R +R
Sbjct: 61 LLDSSAAAVEYTVPVNTRMLQCVMSRVDLLLKCGIHPVLVFDGAEIPMKRGKEEERKGNR 120
Query: 97 KENLARAIECESEGNSSASYEFYQ-------KAVDISPSIAHELIQVLKQQNVSYIVAPY 149
++L A+ GN+ + Q K +DI+ +AH +I VL+++ + IVAPY
Sbjct: 121 DKHLIEALALLGNGNAPCTKSVQQEITALLEKGMDITTELAHAVILVLQERRLECIVAPY 180
Query: 150 EADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG--QGVEFQ----CSMLQKN 203
EADAQ+ +L V+AVI+EDSDLI + C +I K+D G Q + Q C Q+
Sbjct: 181 EADAQLAYLCKQGYVQAVISEDSDLIAYQCPYLIAKLDHQGNCQVISAQDIPRCPKFQR- 239
Query: 204 KDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK----YS 259
LS+ F L CI+SGCDYL SL +G+K+A AL+ + S +++ L+ ++
Sbjct: 240 --LSYESF-----LVGCIMSGCDYLPSLRLIGIKKAFALVRQADSVRGLMQILETKFGFA 292
Query: 260 TVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS 295
+ YE +A F H VYDP+ +V L+
Sbjct: 293 REELRE-YEPGLQRAFYCFVHHIVYDPRKRKLVTLT 327
>gi|403340704|gb|EJY69645.1| XPG family protein [Oxytricha trifallax]
Length = 666
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 163/305 (53%), Gaps = 10/305 (3%)
Query: 33 SWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKR 92
+WL+KGA SC+ EL T + Y + + L+++YG+KPI +FDG L K+E E R
Sbjct: 2 TWLYKGAYSCAYELGLEQQTFGFLSYPIKMLKLVQYYGIKPICVFDGMPLDAKMETEQGR 61
Query: 93 ARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEAD 152
S+K N A+ EG + + + +++ + + L+ VLK ++ +I APYEAD
Sbjct: 62 KDSKKTNKDLALRFAREGKVEEAKKHFMRSLQLRSKMIDLLMDVLKVLDIEFIKAPYEAD 121
Query: 153 AQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQC-SMLQKNK--DLSFG 209
AQ+ +L + I+EDSDLI FGC R++ K+D G F +Q NK D S
Sbjct: 122 AQIAYLVREGIADIAISEDSDLIAFGCPRLLMKLDFRGICQVFDADDFIQNNKITDASLK 181
Query: 210 GFTK---QMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYS---TVSV 263
K + + +CI+ GCDYL S+ +GLK A K ++ +KVI+ ++ + T +V
Sbjct: 182 FLQKANRKQFVSICIMGGCDYLPSIQKVGLKIAVKFFQKHETIEKVIEAMRANSTYTQNV 241
Query: 264 PPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGN-DLDFLAKGIAIGDLDPFTQ 322
P Y E+ K F +Q V++P+T L I + + D +FL K I +D + Q
Sbjct: 242 PFNYVEALLKVQTLFFYQTVFNPRTNKFTSLENIPEEDQDIDKNFLGKYIEENLIDDYVQ 301
Query: 323 LPFQE 327
F++
Sbjct: 302 GHFKK 306
>gi|261330365|emb|CBH13349.1| exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 796
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 182/353 (51%), Gaps = 45/353 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHK---GALSCSREL----------- 46
MGI+GL +K + H++E G V VD Y WLH+ G++ S E
Sbjct: 1 MGIKGLWGEVKPVCRDAHLEEFRGSRVGVDMYVWLHRAVSGSVDLSTEANVEMLRAHVES 60
Query: 47 ---------CKGLP-TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSR 96
+P ++ + + M +V LL YGVKP+L+FDG LPMK E+E +R R+R
Sbjct: 61 LSDPSVTVSAHPIPLNTKFLHWVMSQVELLLRYGVKPVLVFDGRELPMKREEEEERRRNR 120
Query: 97 KENLARAIECESEGNSSASYE------FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYE 150
++L+ A++ + E ++ +DI+ +AH +I +L+++ + IVAPYE
Sbjct: 121 IKHLSEALDLLRRNSRPTPSERKDIAGLVERGMDITTELAHAVIMMLQERQLECIVAPYE 180
Query: 151 ADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLS--- 207
ADAQ+ +L + V+AVITEDSDL+ + C R+I K+D G C +++ L
Sbjct: 181 ADAQLAYLCQQRYVDAVITEDSDLLVYWCPRLIAKLDHKG-----SCQVIEVESVLHCPL 235
Query: 208 FGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP--- 264
F G + L CILSGCDYL +L +G+K+A ++S+ +S VI+ L+ P
Sbjct: 236 FQGLSYNSFLVGCILSGCDYLPNLRHIGVKKAFGIMSEARSVPDVIRLLE-ENYGFPREQ 294
Query: 265 -PFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGIAIGD 316
YE +A+ F H V+DP +V + + + + L G +GD
Sbjct: 295 LRKYEAGLQRAIYCFLHHIVFDPVRRALVTRTPLPNGVAFKQSIL--GELVGD 345
>gi|72392705|ref|XP_847153.1| exonuclease [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359240|gb|AAX79683.1| exonuclease, putative [Trypanosoma brucei]
gi|70803183|gb|AAZ13087.1| exonuclease, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 797
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 182/353 (51%), Gaps = 45/353 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHK---GALSCSREL----------- 46
MGI+GL +K + H+++ G V VD Y WLH+ G++ S E
Sbjct: 1 MGIKGLWGEVKPVCRDAHLEKFRGSRVGVDMYVWLHRAVSGSVDLSTEANVEMLRAHVES 60
Query: 47 ---------CKGLP-TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSR 96
+P ++ + + M +V LL YGVKP+L+FDG LPMK E+E +R R+R
Sbjct: 61 LSDPSVTVSAHPIPLNTKFLHWVMSQVELLLRYGVKPVLVFDGRELPMKREEEEERRRNR 120
Query: 97 KENLARAIECESEGNSSASYE------FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYE 150
++L+ A++ + E ++ +DI+ +AH +I +L+++ + IVAPYE
Sbjct: 121 IKHLSEALDLLRRNSRPTPSERKDIAGLVERGMDITTELAHAVIMMLQERQLECIVAPYE 180
Query: 151 ADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLS--- 207
ADAQ+ +L + V+AVITEDSDL+ + C R+I K+D G C +++ L
Sbjct: 181 ADAQLAYLCQQRYVDAVITEDSDLLVYWCPRLIAKLDHKG-----SCQVIEVESVLHCPL 235
Query: 208 FGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP--- 264
F G + L CILSGCDYL +L +G+K+A ++S+ +S VI+ L+ P
Sbjct: 236 FKGLSYNSFLVGCILSGCDYLPNLRHIGVKKAFGIMSEARSVPDVIRLLE-ENYGFPREQ 294
Query: 265 -PFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGIAIGD 316
YE +A+ F H V+DP +V + + + + L G +GD
Sbjct: 295 LRKYEAGLQRAIYCFLHHIVFDPVKRALVTRTPLPNGVAFKQSIL--GELVGD 345
>gi|412985227|emb|CCO20252.1| predicted protein [Bathycoccus prasinos]
Length = 728
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 116/180 (64%), Gaps = 11/180 (6%)
Query: 22 LEGCCVAVDTYSWLHKGALSCSRELCKG----LPTSR---HIDYCMHRVNLLRHYGVKPI 74
++G AVD YSWLHKGA SC+ EL G + +R +++YC+HR +L+ +GV+P+
Sbjct: 84 IKGMRAAVDAYSWLHKGAYSCALELHTGNHYWVKQNRDAPYVNYCIHRAKMLKFFGVEPV 143
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
++FDG LP K +E R + R+E + E +GN + + +++DISP +A ELI
Sbjct: 144 IVFDGDRLPAKASEEGTRRQRREEAKQKGRERLEQGNREGATFMFTQSLDISPRMALELI 203
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQ----VEAVITEDSDLIPFGCSRIIFKMDKFG 190
LK++ + ++VAPYEADAQ+ LA + V+ V TEDSDL+ +GC R+ FK+DKFG
Sbjct: 204 VALKREGIEFVVAPYEADAQIAHLARQSRENGGVDVVFTEDSDLVAYGCERVCFKLDKFG 263
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 203 NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL--KYST 260
N LSF +T L +C +SGCD+L+++ +G K+AHA ++K K + K
Sbjct: 354 NSPLSFENWTHDDFLGLCAMSGCDFLENVRNVGFKKAHAFVNKNDRCAKTALEMMSKDPK 413
Query: 261 VSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNI----GNDLDFLAK------ 310
+ VP Y E + +AV TF+H +YD K + + HL+ + + + ++LDFL K
Sbjct: 414 IDVPEGYVEKWQRAVYTFRHALIYDVKEKTLKHLTPLPEELLGKTSDELDFLGKVFEDKV 473
Query: 311 --GIAIGDLDPFTQLPF 325
IA G +DP + PF
Sbjct: 474 AIEIAEGRMDPIARRPF 490
>gi|399217832|emb|CCF74719.1| unnamed protein product [Babesia microti strain RI]
Length = 434
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 32/325 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP LK + +HIK C A+D W+H+ ++ + + G + ++ + +
Sbjct: 1 MGINKLLPFLKPLSKRVHIKGYSSCVAAIDAMCWIHRALVASASKHLIGEDSIAYLKFIL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+NLL +G+ PI++FDG LP K ++ NKR R++ A+ G EFY+
Sbjct: 61 SMLNLLILHGITPIMVFDGKELPAKEQENNKRRERRQQAKEEALRMYKSGKYDKG-EFYR 119
Query: 121 K---AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPF 177
K A+ ++ I +I K NV I+AP+EAD Q+ +L + ++EDSDL+ +
Sbjct: 120 KCIQAITVTDEIIDRVIATCKHLNVQVIIAPFEADPQLAYLCRTGVANIAVSEDSDLLVY 179
Query: 178 GCSRIIFKMDKFGQGVEFQ-CSMLQKNKDLS---------------FGGFTKQMLLEMCI 221
GC R+++K+ K G E ++ + +S FT +M MCI
Sbjct: 180 GCPRVLYKLGKDGYAEEVNIVTICHLPRQISPSYPRGPKPSGNIAMLKDFTPEMFATMCI 239
Query: 222 LSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHLKYST---------VSVPPFYEES 270
LSG DY + + GMG+ A+ ++SK+KS D +++ L+ + +S+ +
Sbjct: 240 LSGSDYDNNAHIHGMGIVMAYKIVSKYKSIDAIMEFLETDSNWKDKLPQHLSIEQLTAK- 298
Query: 271 FGKAVLTFQHQRVYDPKTEDIVHLS 295
+ A+ F H VYDP+ + I ++S
Sbjct: 299 YRTALCIFMHHWVYDPEQKLICNIS 323
>gi|302698639|ref|XP_003038998.1| hypothetical protein SCHCODRAFT_231917 [Schizophyllum commune H4-8]
gi|300112695|gb|EFJ04096.1| hypothetical protein SCHCODRAFT_231917 [Schizophyllum commune H4-8]
Length = 341
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 147/279 (52%), Gaps = 69/279 (24%)
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
MHRV +LRH GV+P ++FDGG LP K EN++ + R+E++A A ++G S + + Y
Sbjct: 1 MHRVRMLRHNGVEPYVVFDGGPLPAKKGMENEQRQKREESMACANMLAAQGKHSQARDHY 60
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
VD++P +A+++I+ L+ +NV Y VAPYEADAQM FL + V A+ITEDSDL+ GC
Sbjct: 61 LMCVDVTPEMAYQVIKALRVENVKYGVAPYEADAQMAFLERTGAVHAIITEDSDLLVLGC 120
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNK-DLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
++FK+D C+++ ++ D +F ++ CD
Sbjct: 121 KNVLFKLD------HAHCTVIAISRADFAF-------------VTACD------------ 149
Query: 239 AHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS 298
++S FK ++ F HQRVYDP E++VHL+ +
Sbjct: 150 ---VVSLFKLAEQ-------------------------CFLHQRVYDPAREELVHLTDVG 181
Query: 299 DNIGNDLDF---------LAKGIAIGDLDPFTQLPFQEV 328
D+ + D +AKGIA G+LDP T LP ++V
Sbjct: 182 DDWTEEADSYVGPHITPDIAKGIAYGELDPKTHLPVKDV 220
>gi|361128942|gb|EHL00867.1| putative Exonuclease 1 [Glarea lozoyensis 74030]
Length = 432
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 100/146 (68%)
Query: 15 IPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
+P+++K+ EG + +D Y WLH+G ++C+ E+ KG PT + +D+CMHRV +L+H+GV P
Sbjct: 3 VPVNLKKFEGKTLGIDAYGWLHRGTVACAMEIAKGQPTRKFVDFCMHRVRMLQHFGVVPF 62
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
L+FDG LP K E++R++ R+E+ E ES G +Y +QKAVD++P +A +LI
Sbjct: 63 LVFDGDYLPSKAATESERSKRREESKRSGYELESAGKLQQAYAEFQKAVDVTPEMARQLI 122
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAV 160
LK V Y+VAPYEADAQM + V
Sbjct: 123 DELKITGVQYLVAPYEADAQMQPIIV 148
>gi|268575672|ref|XP_002642815.1| Hypothetical protein CBG21211 [Caenorhabditis briggsae]
Length = 646
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 157/310 (50%), Gaps = 33/310 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP +K+ +I+EL G VA+D LH+G C ++ G T +I+Y
Sbjct: 1 MGITGLLPFVKNACRKGNIRELRGKSVAIDVSCLLHRGLTGCMDKIHMGEETQSYINYVD 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ L +++FDG LP K + R R++ A ++G + + Y+
Sbjct: 61 KYIQELLGMECHVVMVFDGRPLPAKKSTNDDRREMREKRKEHAEMLLAKGKEREARDHYR 120
Query: 121 KAVDISPSIAHELIQVLKQ-QNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
A IS I + I ++ +NV +VAPYEADAQ+ +L SK V+AV+TEDSDLI FGC
Sbjct: 121 LATTISAEIVEKTIVFFRKIRNVDVVVAPYEADAQLAYLMQSKLVDAVVTEDSDLIVFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDL------SFGG--FTKQMLLEMCILSGCDYLQS- 230
I FK Q V CS+ QK+ DL GG F +CIL+GCDYLQS
Sbjct: 181 ETIYFKW----QSVTGDCSVYQKS-DLKKCFSGELGGEKFDFVKFRRICILAGCDYLQSG 235
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPF-------------YEESFGKAVLT 277
LPG+GL A KF S IK L+ +P + + F +A T
Sbjct: 236 LPGVGL----ATAVKFFSLTS-IKDLRILLRKIPSYLKNPKLKEHVNEEFIRGFERAENT 290
Query: 278 FQHQRVYDPK 287
F+HQ V+DP+
Sbjct: 291 FKHQIVFDPR 300
>gi|341889727|gb|EGT45662.1| hypothetical protein CAEBREN_02863 [Caenorhabditis brenneri]
Length = 663
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 153/305 (50%), Gaps = 23/305 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP +K+ +I EL G VA+D LH+G C ++ G T ++ Y
Sbjct: 1 MGITGLLPFVKNACRKGNILELRGKSVAIDVSCLLHRGLTGCMDKIHMGEETQSYVTYVN 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V L G +++FDG LP K + R R++ A ++G + + Y+
Sbjct: 61 RYVKELLDMGCHVVMVFDGRPLPAKKGTNDDRREQREKRKEHAEMLLAKGLEREARDHYR 120
Query: 121 KAVDISPSIAHELIQVLK-QQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
A IS I + IQ + NV +VAPYEADAQ+ +L SK V++VITEDSDLI FGC
Sbjct: 121 LATSISAEIVSKTIQHFRGTPNVDIVVAPYEADAQLAYLMESKLVDSVITEDSDLIVFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQK-NKDLSFGG------FTKQMLLEMCILSGCDYLQS-L 231
I FK Q +CS+ +K N F G F +CIL+GCDYLQS L
Sbjct: 181 EMIYFKW----QAATGECSVYEKCNLKKCFTGELGGDKFDFVKFRRICILAGCDYLQSGL 236
Query: 232 PGMGLKRAHALIS--KFKSYDKVIKHLKYSTVSVPPFYE-------ESFGKAVLTFQHQR 282
PG+G+ A S K V+K + Y + P E +F +A TF+HQ
Sbjct: 237 PGVGISTAAKFFSLTSIKDLRTVLKKVPY-YLKNPKLKEHVTEDFIRNFERAENTFKHQI 295
Query: 283 VYDPK 287
V+DP+
Sbjct: 296 VFDPR 300
>gi|294891258|ref|XP_002773499.1| Flap structure-specific endonuclease, putative [Perkinsus marinus
ATCC 50983]
gi|239878652|gb|EER05315.1| Flap structure-specific endonuclease, putative [Perkinsus marinus
ATCC 50983]
Length = 221
Score = 159 bits (403), Expect = 3e-36, Method: Composition-based stats.
Identities = 82/196 (41%), Positives = 127/196 (64%), Gaps = 9/196 (4%)
Query: 1 MGIQGLLPLLKSIMIPIH--IKELEGCCVAVDTYSWLHKG--ALSCSRELCKGLPTSRHI 56
MGI GLL L+ + PI + E +AVDTY WLH+G A + + ++ G PTS H+
Sbjct: 1 MGINGLLKTLEQLQRPISQDLSEYRDKRIAVDTYVWLHRGLQAGNAAMDVVTGKPTSLHL 60
Query: 57 DYCMHRVNLLRHYGV-KPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSAS 115
+YC+ R+ +L GV + +L+FDG LP K+ E++R + R+E +E GN +A+
Sbjct: 61 NYCVRRLEVLLSAGVAEVVLVFDGCPLPAKLGVEDERQKRRQEARELGLEYRKAGNHAAA 120
Query: 116 YEFYQKAVDISPSIAHELIQVLK----QQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + +A D++P +A ELI +++ Q +IVAPYEADAQ+ +LA++ V+AVI+ED
Sbjct: 121 RKMFTRAADVTPDMAAELISLIRGVSNQLAFRWIVAPYEADAQLAYLALNGLVDAVISED 180
Query: 172 SDLIPFGCSRIIFKMD 187
SDL+PFGC +I+K+D
Sbjct: 181 SDLLPFGCPHVIYKLD 196
>gi|403224257|dbj|BAM42387.1| uncharacterized protein TOT_040000754 [Theileria orientalis strain
Shintoku]
Length = 1042
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 181/376 (48%), Gaps = 66/376 (17%)
Query: 10 LKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHY 69
LKS ++IK GC AVD W+H+ +S + +G + + + + + ++LL Y
Sbjct: 343 LKSNEKCVNIKRYAGCVAAVDAMCWIHRSMVSSAVANVRGEMSDKFLKFIISMLSLLLSY 402
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLAR-AIECESEGNSSASYEFYQK---AVDI 125
+ PI++FDG +P K + EN R R+E + A+E ++ + + E +K A+ I
Sbjct: 403 NITPIMVFDGYEMPAK-KAENMMRRERREKAKKEALEMIAKNKNKINTEIMKKCMQAIHI 461
Query: 126 SPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFK 185
+P I + +I V K+ NV+ IV+P+EADAQ+++L S + I+EDSDL+ +GC +II+K
Sbjct: 462 TPEIIYRVISVCKKINVAVIVSPFEADAQVSYLCRSGIADIAISEDSDLVVYGCPKIIYK 521
Query: 186 MDKFGQGVEFQC-----------------------------SMLQKNKDLS--------- 207
+DK G+GVE SM +KD
Sbjct: 522 LDKEGKGVELNVPFNAFKAAPGPKKRKEVKFEKPEERSGEESMDLDSKDEEEKHTNKSDY 581
Query: 208 -------FGGFTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHLKY 258
F G +M + MC+LSG DY + GMGLK A+ LI + + + V+K +
Sbjct: 582 AEKDARIFKGLNHRMFVVMCVLSGTDYDDGYHINGMGLKVAYRLILEHERLEGVLKSVYE 641
Query: 259 STVSVPPFYEESFGKAVL-------TFQHQRVYDPKTEDIVHLSCIS--DNIG-NDLDFL 308
E F +L F H V+DPK ++H++ IS DN+ N L+ L
Sbjct: 642 DAKWSSKLAEYKFEDILLHYENVCKIFLHNIVFDPKKHQLIHINPISNLDNMSTNKLELL 701
Query: 309 AKGIA----IGDLDPF 320
+ + I D+ F
Sbjct: 702 KEEVGEYKFIYDMSAF 717
>gi|390334351|ref|XP_003723906.1| PREDICTED: uncharacterized protein LOC762697 isoform 3
[Strongylocentrotus purpuratus]
Length = 1028
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 9/244 (3%)
Query: 65 LLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVD 124
+LR +KP+++FDG LP K E+ R R+ + + EG +S + + + K ++
Sbjct: 1 MLRALDIKPVMVFDGRNLPAKAGVEDSRRERRETYSKKGRQFLREGKASEARDCFVKCIN 60
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
++P +A +++ ++ V IVAPYEADAQ+ +L + V+AVITEDSDLI FGC ++I
Sbjct: 61 VTPEMALNVMKAVRSLGVDCIVAPYEADAQLAYLEKNGFVQAVITEDSDLIAFGCKKVIV 120
Query: 185 KMDKFGQGVEFQCSMLQKNKDLSFG-GFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALI 243
K+D G ++ S L N + G FT + MCI++GCDYL SLPG+G+ +A L
Sbjct: 121 KLDLAGNCMDVDSSRL--NVAMKIGEKFTPEKFRYMCIVAGCDYLASLPGIGIGKARKLF 178
Query: 244 SKFKSYD--KVIKH----LKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCI 297
+ D +VIK LK + +V P Y+E F +A TF +Q +DP+ + + L+
Sbjct: 179 QLTANPDITQVIKRMATTLKMKSTTVTPEYQEGFVQANNTFLYQLAFDPQKKKLQPLTPY 238
Query: 298 SDNI 301
S +
Sbjct: 239 SPEV 242
>gi|403371708|gb|EJY85737.1| XPG family protein [Oxytricha trifallax]
Length = 734
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 162/304 (53%), Gaps = 10/304 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+QGLL LLK + H+ + G +VD +WL+KGA + S EL T + Y +
Sbjct: 1 MGVQGLLQLLKPALRDCHLSQFRGQTASVDIMTWLYKGAYAYSYELGLDSQTLGFLAYPL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ L++ YG+KPI +FDG L K E R+ +++ N A++ +GN + +++
Sbjct: 61 KMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAEDGNEEDARKYFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++ + + I +LK+ + +VAPYEAD+Q+ ++ + I+EDSDLI +GC
Sbjct: 121 RSLILRSKMIDLFIDILKKLEIEMVVAPYEADSQIAYMVKEGIADFAISEDSDLIAYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLS------FGGFTKQMLLEMCILSGCDYLQSLPGM 234
+++ K++ G F + + N ++ +++ +++CI++GC+YL S+ +
Sbjct: 181 KLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQFVQICIMAGCEYLPSIQQV 240
Query: 235 GLKRAHALISKFKS-YDKVIKHLKYSTV---SVPPFYEESFGKAVLTFQHQRVYDPKTED 290
GLK A L K ++V++ LK + + VP Y + K F +Q V+D +
Sbjct: 241 GLKVAIKLFMKNNGDVEQVLESLKTNKIFKDRVPEGYLSALKKVQQLFFYQTVFDTRIGK 300
Query: 291 IVHL 294
+ L
Sbjct: 301 LTSL 304
>gi|221509067|gb|EEE34636.1| exonuclease, putative [Toxoplasma gondii VEG]
Length = 952
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 162/334 (48%), Gaps = 53/334 (15%)
Query: 2 GIQGLL-PLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
G+ LL LK + P HI E G V VD SWLH+GA++C+ EL K + + + + +
Sbjct: 23 GMNDLLQKFLKPLAQPAHISEFAGQTVGVDAMSWLHRGAIACAVELIKQEESDKFLRFVI 82
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
H + L +++ V+P+L+FDG +P K ++ KR ++R++ A E + YE +
Sbjct: 83 HMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARQKASEEARELLKK------YEEAR 136
Query: 121 KAVDISP--SIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFG 178
+A P + +I + V+++VAPYEADAQ+ FLA + ++ A ++EDSDL+ G
Sbjct: 137 RAGRKPPGDTRVDTVISACRSLGVAFVVAPYEADAQLAFLARTGKIAAAVSEDSDLLAHG 196
Query: 179 CSRIIFKMDKFGQGVEFQCSMLQK--------------NKDLS----FGGFTKQMLLEMC 220
C +++FKMD+ G + + K L F + M MC
Sbjct: 197 CQQVLFKMDREGNCERLSLPLNDRASPDAAQASVSASSAKKLGQLECLRDFDQTMFTAMC 256
Query: 221 ILSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGK----- 273
+L GCDY + G+G+ A + K + VI++L F +E + K
Sbjct: 257 VLGGCDYTHDVHINGLGISTACRFVHKLGKLEAVIQYL---------FKDEKWRKKLTLP 307
Query: 274 ----------AVLTFQHQRVYDPKTEDIVHLSCI 297
A++ F H RV+D + +V S +
Sbjct: 308 QEVVLRGHKMAMVAFTHHRVFDVNSGLVVSASSL 341
>gi|237837741|ref|XP_002368168.1| exonuclease, putative [Toxoplasma gondii ME49]
gi|211965832|gb|EEB01028.1| exonuclease, putative [Toxoplasma gondii ME49]
Length = 951
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 162/334 (48%), Gaps = 53/334 (15%)
Query: 2 GIQGLL-PLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
G+ LL LK + P HI E G V VD SWLH+GA++C+ EL K + + + + +
Sbjct: 23 GMNDLLQKFLKPLAQPAHISEFAGQTVGVDAMSWLHRGAIACAVELIKQEESDKFLRFVI 82
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
H + L +++ V+P+L+FDG +P K ++ KR ++R++ A E + YE +
Sbjct: 83 HMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARQKASEEARELLKK------YEEAR 136
Query: 121 KAVDISP--SIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFG 178
+A P + +I + V+++VAPYEADAQ+ FLA + ++ A ++EDSDL+ G
Sbjct: 137 RAGRKPPGDTRVDTVISACRSLGVAFVVAPYEADAQLAFLARTGKIAAAVSEDSDLLAHG 196
Query: 179 CSRIIFKMDKFGQGVEFQCSMLQK--------------NKDLS----FGGFTKQMLLEMC 220
C +++FKMD+ G + + K L F + M MC
Sbjct: 197 CQQVLFKMDREGNCERLSLPLNDRASPDAAQASVSASSAKKLGQLECLRDFDQTMFTAMC 256
Query: 221 ILSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGK----- 273
+L GCDY + G+G+ A + K + VI++L F +E + K
Sbjct: 257 VLGGCDYTHDVHINGLGISTACRFVHKLGKLEAVIQYL---------FKDEKWRKKLTLP 307
Query: 274 ----------AVLTFQHQRVYDPKTEDIVHLSCI 297
A++ F H RV+D + +V S +
Sbjct: 308 QEVVLRGHKMAMVAFTHHRVFDVNSGLVVSASSL 341
>gi|221488566|gb|EEE26780.1| exonuclease, putative [Toxoplasma gondii GT1]
Length = 955
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 162/334 (48%), Gaps = 53/334 (15%)
Query: 2 GIQGLL-PLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
G+ LL LK + P HI E G V VD SWLH+GA++C+ EL K + + + + +
Sbjct: 23 GMNDLLQKFLKPLAQPAHISEFAGQTVGVDAMSWLHRGAIACAVELIKQEESDKFLRFVI 82
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
H + L +++ V+P+L+FDG +P K ++ KR ++R++ A E + YE +
Sbjct: 83 HMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARQKASEEARELLKK------YEEAR 136
Query: 121 KAVDISP--SIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFG 178
+A P + +I + V+++VAPYEADAQ+ FLA + ++ A ++EDSDL+ G
Sbjct: 137 RAGRKPPGDTRVDTVISACRSLGVAFVVAPYEADAQLAFLARTGKIAAAVSEDSDLLAHG 196
Query: 179 CSRIIFKMDKFGQGVEFQCSMLQK--------------NKDLS----FGGFTKQMLLEMC 220
C +++FKMD+ G + + K L F + M MC
Sbjct: 197 CQQVLFKMDREGNCERLSLPLNDRPSPDAAQASVSASSAKKLGQLECLRDFDQTMFTAMC 256
Query: 221 ILSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGK----- 273
+L GCDY + G+G+ A + K + VI++L F +E + K
Sbjct: 257 VLGGCDYTHDVHINGLGISTACRFVHKLGKLEAVIQYL---------FKDEKWRKKLTLP 307
Query: 274 ----------AVLTFQHQRVYDPKTEDIVHLSCI 297
A++ F H RV+D + +V S +
Sbjct: 308 QEVVLRGHKMAMVAFTHHRVFDMNSGLVVSASSL 341
>gi|156084852|ref|XP_001609909.1| XPG I-region family protein [Babesia bovis]
gi|154797161|gb|EDO06341.1| XPG I-region family protein [Babesia bovis]
Length = 501
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 162/314 (51%), Gaps = 21/314 (6%)
Query: 9 LLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRH 68
L+ + + + EG VAVD W+H+G +S + G P ++I + + +++L
Sbjct: 21 FLRPMQTTVSLANYEGKVVAVDAMCWIHRGMISSAVANVTGEPCDKYIKFIVSILSVLLS 80
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA-SYEFYQK---AVD 124
+ + PI++FDG +P K E EN+ R R++ E N A + E +K A+
Sbjct: 81 HKITPIMVFDGYDMPTK-ETENQLRRERRDKAREEALAMIEKNGGAINTEIMRKCMQAIH 139
Query: 125 ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIF 184
I+P + ++++ + NV +VAPYEADAQ+++L S A ++EDSDL+ +GC R+ F
Sbjct: 140 ITPEVIARVMEICRAMNVRIVVAPYEADAQVSYLCRSGIAYAALSEDSDLLVYGCPRVWF 199
Query: 185 KMDKFGQGVEFQCSMLQKNKDLS-----FGGFTKQMLLEMCILSGCDYLQS--LPGMGLK 237
K+++ G+ E K+ D+ G + +M + MC+LSG DY + GMG+K
Sbjct: 200 KLERDGKADELTLG-FNKDPDVKCNTGLLKGLSHRMFIAMCVLSGSDYDNGCHIHGMGIK 258
Query: 238 RAHALISKFKSYDKVIKHLKYSTVSVPPF--------YEESFGKAVLTFQHQRVYDPKTE 289
AH I ++++ V+ L+ S F E + + + F H VYD + +
Sbjct: 259 LAHRFILQYETLPAVMAFLQSSDAWSKKFPAHLTIKELEAYYMRVMQIFLHNIVYDVRHD 318
Query: 290 DIVHLSCISDNIGN 303
+ H+S +SD N
Sbjct: 319 TLRHISPVSDGATN 332
>gi|403337691|gb|EJY68068.1| XPG family protein [Oxytricha trifallax]
Length = 719
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 162/304 (53%), Gaps = 10/304 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+QGLL LLK + H+ + G +VD +WL+KGA + S EL T + Y +
Sbjct: 1 MGVQGLLQLLKPALRDCHLSQFRGQTASVDIMTWLYKGAYAYSYELGLDSQTLGFLAYPL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ L++ YG+KPI +FDG L K E R+ +++ N A++ +GN + +++
Sbjct: 61 KMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAEDGNEEDARKYFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++ + + I +LK+ + +VAPYEAD+Q+ ++ + I+EDSDLI +GC
Sbjct: 121 RSLILRSKMIDLFIDILKKLEIEMVVAPYEADSQIAYMVKEGIADFAISEDSDLIAYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLS------FGGFTKQMLLEMCILSGCDYLQSLPGM 234
+++ K++ G F + + N ++ +++ +++CI++GC+YL S+ +
Sbjct: 181 KLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQFVQICIMAGCEYLPSIQQV 240
Query: 235 GLKRAHALISKFKS-YDKVIKHLKYSTV---SVPPFYEESFGKAVLTFQHQRVYDPKTED 290
GLK A L K ++V++ LK + + VP Y + K F +Q V+D +
Sbjct: 241 GLKVAIKLFMKNNGDVEQVLESLKTNKIFKDRVPEGYLSALKKVQQLFFYQTVFDTRIGK 300
Query: 291 IVHL 294
+ L
Sbjct: 301 LTSL 304
>gi|403348528|gb|EJY73701.1| XPG family protein [Oxytricha trifallax]
Length = 734
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 162/304 (53%), Gaps = 10/304 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+QGLL LLK + ++ + G +VD +WL+KGA + S EL T + Y +
Sbjct: 1 MGVQGLLQLLKPALRDCNLSQFRGQTASVDIMTWLYKGAYAYSYELGLDQQTLGFLAYPL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ L++ YG+KPI +FDG L K E R+ +++ N A++ +GN + +++
Sbjct: 61 KMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAEDGNEEDARKYFM 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+++ + + I +LK+ + +VAPYEAD+Q+ ++ + I+EDSDLI +GC
Sbjct: 121 RSLILRSKMIDLFIDILKKLEIEMVVAPYEADSQIAYMVKEGIADFAISEDSDLIAYGCP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLS------FGGFTKQMLLEMCILSGCDYLQSLPGM 234
+++ K++ G F + + N ++ +++ +++CI++GC+YL S+ +
Sbjct: 181 KLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQFVQICIMAGCEYLPSIQQV 240
Query: 235 GLKRAHALISKFKS-YDKVIKHLKYSTV---SVPPFYEESFGKAVLTFQHQRVYDPKTED 290
GLK A L K ++V++ LK + + VP Y + K F +Q V+D +
Sbjct: 241 GLKVAIKLFMKNNGDVEQVLESLKTNKIFKDRVPEGYLSALKKVQQLFFYQTVFDTRIGK 300
Query: 291 IVHL 294
+ L
Sbjct: 301 LTSL 304
>gi|308812654|ref|XP_003083634.1| 5'-3' exonuclease (ISS) [Ostreococcus tauri]
gi|116055515|emb|CAL58183.1| 5'-3' exonuclease (ISS) [Ostreococcus tauri]
Length = 431
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 159/302 (52%), Gaps = 48/302 (15%)
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
++FDG LP K +E +R R R+E L R E+ G+ + + A D++P +A ELI
Sbjct: 1 MVFDGDALPAKRREEGERRRRRREALERGRRAEAAGDGRGATTHFAGATDVTPEMARELI 60
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQ----VEAVITEDSDLIPFGCSRIIFKMDKFG 190
LK++N Y+VAPYEADAQ+ LA + + V+ V TEDSDL+ +GC +++FK++K G
Sbjct: 61 VALKRENFEYVVAPYEADAQIAHLARTPKERGGVDMVFTEDSDLVAYGCPKVMFKLEKSG 120
Query: 191 QGVEFQ-----CSMLQKNKD---------------------------LSFGGFTKQMLLE 218
+F+ L D L+F G+ + L+
Sbjct: 121 DARQFRLEDMLAGRLPAATDENENENAENAATTTATNGTKKRSNGNVLNFQGWGYDLFLD 180
Query: 219 MCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTV---SVPPFYEESFGKAV 275
+C+ SGCD+L ++PG+G+K+ L+ K + V L+ +P YEE + KA
Sbjct: 181 LCVFSGCDFLSNIPGLGIKKMFKLLDKHRDAQAVFTALRADPKINDIIPNGYEEDWRKAR 240
Query: 276 LTFQHQRVYDPKTEDIVHLSCISDN-IGNDLDFL--------AKGIAIGDLDPFTQLPFQ 326
+ F+H VYD + +V+LS + D + +DLDFL AK IA G+L+P ++ F+
Sbjct: 241 MIFKHAVVYDRNSHTLVNLSPLPDEAVFDDLDFLGPKFDDGQAKRIADGELNPISREKFE 300
Query: 327 EV 328
+
Sbjct: 301 KT 302
>gi|301606138|ref|XP_002932663.1| PREDICTED: exonuclease 1-like, partial [Xenopus (Silurana)
tropicalis]
Length = 651
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 143/245 (58%), Gaps = 17/245 (6%)
Query: 89 ENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAP 148
E R R+ NL + + EG + + E + ++V+I+ S+AH++I+ + + + IVAP
Sbjct: 4 EKARREKRQTNLQKGKQLLREGKLAEARECFARSVNITSSMAHDVIKAARAEGIDCIVAP 63
Query: 149 YEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSF 208
+EAD+Q+ +L ++ EA+ITEDSDL+ FGC ++I KMDKFG G+E + + L
Sbjct: 64 FEADSQLAYLNKNEFAEAIITEDSDLLAFGCKKVILKMDKFGNGLEIDQARFGMCRSLG- 122
Query: 209 GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYD------KVIKHLKYSTVS 262
FT++ MCILSGCDYL S+ G+GL +A L+ + D K+ ++LK + ++
Sbjct: 123 DVFTEEKFRYMCILSGCDYLPSIHGIGLAKACKLLKIANNPDITTVIKKIGQYLK-TNIT 181
Query: 263 VPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIG---------NDLDFLAKGIA 313
VP Y E F +A TF +Q V+DP ++ L+ D++ N D +A IA
Sbjct: 182 VPDGYIEGFLRANNTFLYQLVFDPVERKLIPLNPYGDDVNPEELSYAGPNMGDSVALQIA 241
Query: 314 IGDLD 318
+G++D
Sbjct: 242 LGNMD 246
>gi|17553464|ref|NP_499770.1| Protein EXO-1 [Caenorhabditis elegans]
gi|15718185|emb|CAB07612.2| Protein EXO-1 [Caenorhabditis elegans]
Length = 639
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 151/304 (49%), Gaps = 21/304 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP +K+ +I EL G VA+D LH+G C ++ G T +++Y
Sbjct: 1 MGISGLLPFVKNACRKGNILELRGKSVAIDVSCLLHRGLTGCMDKIHMGEETQSYVNYVN 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V L G +++FDG LP K +R R++ A ++G + + Y+
Sbjct: 61 KYVKELLGMGCHVVMVFDGRPLPAKKGTNEERRELREKRKEHAEMLLAKGLEREARDTYR 120
Query: 121 KAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
A IS I IQ + NV +VAPYEADAQ+ +L K V+AVITEDSDLI FGC
Sbjct: 121 LATSISADIVENTIQYFRSMTNVDIVVAPYEADAQLAYLVQEKLVDAVITEDSDLIVFGC 180
Query: 180 SRIIFKMDKFGQGVEFQCSMLQK-------NKDLSFGGFTKQMLLEMCILSGCDYLQS-L 231
I FK Q +CS+ +K +L F +CILSGCDYLQ+ L
Sbjct: 181 EMIYFKW----QSATGECSVYEKCNLKNCFTGELGGDKFDFVKFRRICILSGCDYLQAGL 236
Query: 232 PGMGLKRAHALISKFKSYD------KVIKHLKYSTVS--VPPFYEESFGKAVLTFQHQRV 283
PG+GL A S D KV +LK + V + +F KA TF+HQ V
Sbjct: 237 PGVGLSTAAKFFSMTSIKDLRTLLRKVPSYLKNPKLKEHVNDEFIRNFEKAENTFKHQIV 296
Query: 284 YDPK 287
+DP+
Sbjct: 297 FDPR 300
>gi|328778065|ref|XP_623359.2| PREDICTED: exonuclease 1-like [Apis mellifera]
Length = 618
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 127/228 (55%), Gaps = 17/228 (7%)
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + + ++++DI+ +A +LI+ + N+ IVAPYEADAQ+ +L +++ V+ VIT
Sbjct: 4 GQHAEARNLIKRSIDITHEMALKLIKECHKMNIDCIVAPYEADAQLAYLNINRIVDVVIT 63
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
EDSDLI FGC +++FKMD G G+ L D+ F L MCILSGCDYL
Sbjct: 64 EDSDLILFGCKKVLFKMDLNGNGLLVDQEQLYLVMDVRSEHFNMDNFLYMCILSGCDYLS 123
Query: 230 SLPGMGLKRAHALISK------FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV 283
SLPG+GL +A IS+ +++ ++ +L ++ V Y +SF AV+TF+HQ V
Sbjct: 124 SLPGIGLNKAKKFISRNADCDIYRALTRLGSYLNMKSLVVSKEYRDSFILAVITFKHQLV 183
Query: 284 Y----------DPKTEDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFT 321
+ +P DI D D +A +A+G+ DPFT
Sbjct: 184 FCPLKRKQVRLNPPMSDITEKQLYYAGTETDPD-IALQLALGNCDPFT 230
>gi|390599651|gb|EIN09047.1| hypothetical protein PUNSTDRAFT_134221 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 637
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 135/254 (53%), Gaps = 38/254 (14%)
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+A++LI+ LK +NV Y+VAPYEADAQ+ +L + V A++TEDSDL+ FGC ++ K+D
Sbjct: 1 MAYQLIKALKAENVPYVVAPYEADAQLAYLERTGAVSAILTEDSDLLVFGCRHVLSKLDH 60
Query: 189 FGQGVEFQCSMLQK-------NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
V S + + + D++ G++ L M ILSGCDYL S+PG+GLK A +
Sbjct: 61 ----VSATVSAVSRPDFGSLSSSDITLLGWSDVQLRAMAILSGCDYLPSIPGVGLKTAWS 116
Query: 242 LISKFKSYDKVIKHLKY-STVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCIS-- 298
L+ K K+ + ++ L+ VP Y ++F A F HQRVYDP +VHL+ +S
Sbjct: 117 LLRKHKNVENAVRALRLEGKKPVPDGYLDAFRLAEKVFLHQRVYDPAQARLVHLNDVSRP 176
Query: 299 ----------DNIGNDLDF-LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKP 347
+ ND+ A IA GD+ + LP + N H ++P
Sbjct: 177 ASPGTRAARPTSARNDVATETAARIATGDVCLASLLPMTNI--NPH-----------YRP 223
Query: 348 ESERKKLDLPVQKN 361
S R+ L L + N
Sbjct: 224 GSGRRPLQLTTEPN 237
>gi|348670592|gb|EGZ10413.1| hypothetical protein PHYSODRAFT_355246 [Phytophthora sojae]
Length = 165
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 101/159 (63%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLLP+LKSI I++ G +A+D Y WLH+ SCS+E+C G T +++ Y M
Sbjct: 1 MGISGLLPVLKSITETKSIEQYRGRTLAIDGYCWLHRAIYSCSQEICLGQETDKYVTYFM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ L H GV P ++FDGG LPMK E +R ++R++N ++ + S + + +
Sbjct: 61 DRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKARQKNRELGVQHYNNKRFSEARKCFI 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLA 159
+A D+SP +AH +IQ LK NV Y+VAPY ADAQ+ +L
Sbjct: 121 RAADVSPYMAHRVIQHLKAHNVQYVVAPYGADAQLAYLV 159
>gi|350425172|ref|XP_003494035.1| PREDICTED: exonuclease 1-like [Bombus impatiens]
Length = 619
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + ++++D++ +A ELI+ + N+ IVAPYEADAQ+ +L ++ + VIT
Sbjct: 4 GQHAEGRNLLRRSIDVTHEMALELIKQCHEMNIDCIVAPYEADAQLAYLNINGIADVVIT 63
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
EDSDLI FGC +++FKMD G G+ L ++ F MCILSGCDYL
Sbjct: 64 EDSDLILFGCKKVLFKMDLTGNGLLIDQEQLHLAMEIPSKHFNMDDFCYMCILSGCDYLP 123
Query: 230 SLPGMGLKRAHALISKFKSYD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV 283
SLPG+GL +A I K D ++ +L ++ V Y +SF AV+TF+HQ V
Sbjct: 124 SLPGIGLNKARKFIKLNKDCDIHKALTRLGSYLNMKSLVVTKEYRDSFTLAVITFKHQLV 183
Query: 284 Y----------DPKTEDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFT 321
+ +P T D+ + D D +A +A+G+ DPFT
Sbjct: 184 FCPLKRKQVRLNPPTSDVTEEQLYYAGLEIDPD-IALQLALGNCDPFT 230
>gi|313229440|emb|CBY24027.1| unnamed protein product [Oikopleura dioica]
Length = 458
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 18/306 (5%)
Query: 1 MGIQGLLPLLKS-IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP--TSRHID 57
MGI GL + + + I + G VA+D W+H+GA+ ++ + P +S I+
Sbjct: 1 MGISGLYDFITACVSKNKSISAIRGQVVAIDMPCWVHRGAVQDAQNVVM-YPEKSSEKIN 59
Query: 58 -YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASY 116
+C+ R+ LL+ + + PI +FDG LP K ++R R+EN RAI G S+ +
Sbjct: 60 AFCLKRLELLKKHNITPICVFDGEKLPSKKATNDQRRARREENRQRAITALKNGESA--W 117
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
++ +A+ ISP+I + + K++ I APYEADAQ+ +L+ K+V+AVITEDSDL
Sbjct: 118 NYFIQAIRISPAITQGVKNMCKEKGYMVITAPYEADAQLAWLSREKRVDAVITEDSDLFI 177
Query: 177 FGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL-QSLPGMG 235
FG +R+I K+ G+ + + K K+L + CI+ GCDY + +PG G
Sbjct: 178 FGTNRLITKLQDDGKCQIVDLARIDKVKELEKFDDKLRWFRYACIMQGCDYFPKGIPGFG 237
Query: 236 LKRA-HALISKFKSYDKVIKHL-----KYSTVSVPPFYEESFGKAVL----TFQHQRVYD 285
LK + L+ F+ D ++ + Y +E + + ++ TF +Q + D
Sbjct: 238 LKTSVKLLLRAFEQNDHSLRAIMDKKDSYFNSKQLAKWEANMAEKIVQAEDTFYYQLIVD 297
Query: 286 PKTEDI 291
K + +
Sbjct: 298 TKNKTV 303
>gi|241122956|ref|XP_002403737.1| exonuclease, putative [Ixodes scapularis]
gi|215493512|gb|EEC03153.1| exonuclease, putative [Ixodes scapularis]
Length = 167
Score = 144 bits (363), Expect = 2e-31, Method: Composition-based stats.
Identities = 81/202 (40%), Positives = 107/202 (52%), Gaps = 40/202 (19%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQGLLP +K +HIKE G AVDTY WLHKGA SC+ L KG T
Sbjct: 1 MGIQGLLPFVKKACREVHIKEFSGGTAAVDTYCWLHKGAFSCAERLAKGEKT-------- 52
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
DG R+ N +A + EG + E YQ
Sbjct: 53 -----------------DG---------------QRETNRQKAKQFLIEGRIKEARECYQ 80
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+AVDI+P +A +LI+ +++ + YIVAPYEADAQ+ +L + VITEDSDLI FGC
Sbjct: 81 RAVDITPEMALDLIKECRRRGIDYIVAPYEADAQLAYLTQRGLADVVITEDSDLILFGCE 140
Query: 181 RIIFKMDKFGQGVEFQCSMLQK 202
+++FKMD+ G G ++ S + K
Sbjct: 141 KVVFKMDQGGFGTLYERSAIGK 162
>gi|299470809|emb|CBN78632.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 387
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 172/357 (48%), Gaps = 63/357 (17%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ LL L + H++ G VA+D +++ +G SCS ++ G + +D+ M
Sbjct: 1 MGVNTLLKHLGPCLGDSHVERFRGKTVALDGNTFIFRGCYSCSEQVALGQACTGPVDHLM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG-NSSASYE-- 117
RV +LRHYGVKP ++ DG PMK + +R + R++NL+ A + SSA E
Sbjct: 61 KRVRMLRHYGVKPWVVLDGRRTPMKDDTGKQRRQEREKNLSMAKHFRRQAEESSAGPEKE 120
Query: 118 --------FYQKAVDISPSIAHELIQVLKQQNVSYIVAPY-------------------- 149
F+QK++ ++ + + LK++ V +V+PY
Sbjct: 121 DLLQKAQTFFQKSIHVTRQMVTNAMSALKREGVECMVSPYANGPSTKQAHPCVANDPHYG 180
Query: 150 ---------EADAQMTFLAVSKQVEAVITEDSDLIPF-----GCSRIIFKMDKFGQGVEF 195
EADAQ+ +L S AVITEDSD++ + + +++KMD+FG E
Sbjct: 181 NQVGFFFFTEADAQVAYLVKSGLASAVITEDSDILVYMAAVKSTAPVLYKMDEFGTCKEL 240
Query: 196 -----QCSML-----QKNKDLSF--GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALI 243
+ S L + + LS G + +++ L+GCDY+ ++ G+GL A ++
Sbjct: 241 GFDPEKLSSLPGVIGKFGRGLSIFSGEGGGRSFVQLAALAGCDYVDNIRGLGLLTALPIV 300
Query: 244 SKF------KSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
+KF K ++ H++ ++P + + A ++F RVYDP+T+ VH
Sbjct: 301 TKFRRTPADKRVSHILMHVQKMGKTIPTGHRDRMHLAEMSFFWHRVYDPRTKKCVHF 357
>gi|323334127|gb|EGA75511.1| Din7p [Saccharomyces cerevisiae AWRI796]
gi|323355597|gb|EGA87417.1| Din7p [Saccharomyces cerevisiae VL3]
Length = 383
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 140/257 (54%), Gaps = 6/257 (2%)
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PT++++ + + R+ LL+ +KP ++FDG L +K E +R + R EN A + S G
Sbjct: 4 PTNKYLQFFIKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAG 63
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + E++QK+VDI+P +A +I K ++ YIVAP+EAD QM +L ++ +I+E
Sbjct: 64 NRYNAMEYFQKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISE 123
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
DSDL+ FGC +I K++ G+ +E S L +N G ++Q + L+GCDY
Sbjct: 124 DSDLLVFGCKTLITKLNDQGKALEISKDDFSALPEN--FPLGELSEQQFRNLVCLAGCDY 181
Query: 228 LQSLPGMGLKRAHALISKFKSY-DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
+ +G+ A ++ ++ D +I+ + + +++ A FQ+QRV+ P
Sbjct: 182 TSGIWKVGVVTAMKIVKRYSEMKDILIQIERTEKLCFSKAFKQQVEFANYAFQYQRVFCP 241
Query: 287 KTEDIVHLSCISDNIGN 303
+ I L+ I + N
Sbjct: 242 LSNQITTLNNIPKAVTN 258
>gi|326437161|gb|EGD82731.1| hypothetical protein PTSG_03380 [Salpingoeca sp. ATCC 50818]
Length = 531
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 155/296 (52%), Gaps = 12/296 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GL+ L++ ++ ++++ G VA+D S+ +KG S S EL + R +
Sbjct: 1 MGVPGLINLVRPVVQTVNLERFTGQRVAIDISSFAYKGCYSRSLELLRNAEDLRPYRFVF 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
R+ LL G+ P+++FDG L K E+ +R R RK A++ +G + + +
Sbjct: 61 KRLALLTTAGITPVVVFDGAPLAAKAEENARRQRQRKAAREEALKLRKQGKVHEARKASR 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+ +S + L+ +L + N+ Y+VAPYEADAQ+ F+A + +V AV+++DSD++ FG
Sbjct: 121 RALHVSRDMQRTLMAMLDRLNIEYVVAPYEADAQLAFMARTGRVAAVLSDDSDMLCFGVP 180
Query: 181 RIIFKMDKFGQGVEFQCSMLQK------NKDLSFGGFTKQMLLEMCILSGCDYLQS---- 230
++ + G Q LQ+ LS L +LSGCDYL
Sbjct: 181 HVLRNLRSSGTCDSIQFHHLQELTLTRYGVRLSLRDLRLDTLQLAAVLSGCDYLPKHSGA 240
Query: 231 -LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD 285
+ G+G++ A + K+K+Y +++HL+ + + + + A+L F Q V+D
Sbjct: 241 HIHGIGMRTAMYVTHKYKTYTDIMQHLRQNYI-ITDDLDAKVRHAMLAFTCQVVWD 295
>gi|383861101|ref|XP_003706025.1| PREDICTED: exonuclease 1-like [Megachile rotundata]
Length = 612
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 123/232 (53%), Gaps = 25/232 (10%)
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + ++++D++ +A ELI+ + N+ IVAPYEADAQ+ +L +S + +IT
Sbjct: 2 GQHAEGRNLLRRSIDVTHEMALELIKECHKMNIDCIVAPYEADAQLAYLNISGIADVIIT 61
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
EDSDLI FGC ++ FKMD G G+ L D+S F+ MCILSGCDYL
Sbjct: 62 EDSDLILFGCKKVFFKMDVNGSGILVDQDRLHVAMDVSSEHFSMDQFRYMCILSGCDYLP 121
Query: 230 SLPGMGLKRAHALI------SKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV 283
SLPG+GL +A I + ++ ++ +L +V V Y ++F A +TF+HQ V
Sbjct: 122 SLPGIGLGKARKFIRINTDSNIHRALTRLGSYLNMKSVVVTQEYRDAFILADITFKHQLV 181
Query: 284 YDP--------------KTEDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFT 321
+ P TE+ +H + + N +A +A G+ DPFT
Sbjct: 182 FCPLRRKQVRLNPPMPDVTEEQLHYAGVETNPD-----IALQLAYGNCDPFT 228
>gi|401408171|ref|XP_003883534.1| T10O22.7, related [Neospora caninum Liverpool]
gi|325117951|emb|CBZ53502.1| T10O22.7, related [Neospora caninum Liverpool]
Length = 959
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 59/332 (17%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGIQ LL LK + P HI G V VD SWLH+GA++C+ EL K T + + + +
Sbjct: 1 MGIQNLLKFLKPLAQPAHISAFAGHTVGVDAMSWLHRGAIACAVELVKQEDTDKFLRFVI 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
H + L +++ V+P+L+FDG +P K ++ KR ++R + A + + +E +
Sbjct: 61 HMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARLKASEEARQLLKQ------HEEAR 114
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A P EL+ Q +++S ++ A ++EDSDL+ GC
Sbjct: 115 RANRKPPGDTRELLTKCAQG-----------------ISISPEMAAAVSEDSDLLAHGCG 157
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFGG---------------------------FTK 213
+++FKMDK G E L+ + L+F F +
Sbjct: 158 QVLFKMDKEGN-CERLVLPLKDSTSLAFTSSTSGPQSSSLSKDANAKKLGQLECLRDFDQ 216
Query: 214 QMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHL----KYSTVSVPPFY 267
+M MC+L GCDY + G+G+ A + K ++VI++L K+ P
Sbjct: 217 KMFTAMCVLGGCDYTHDVHINGLGISTACRFVHKLGKLERVIQYLFKDEKWKKKLTQPQE 276
Query: 268 EESFGK--AVLTFQHQRVYDPKTEDIVHLSCI 297
G A++ F H RV+D T +V S +
Sbjct: 277 AVLRGHKMAMIAFTHHRVFDTSTGLVVAASTL 308
>gi|387593580|gb|EIJ88604.1| hypothetical protein NEQG_01294 [Nematocida parisii ERTm3]
gi|387597235|gb|EIJ94855.1| hypothetical protein NEPG_00380 [Nematocida parisii ERTm1]
Length = 322
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 16/328 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC----KGLPTSRHI 56
MGI GLLP+LK M + + +L+G + VD YSWL+K + ++ ++++
Sbjct: 1 MGIAGLLPMLKPHMEYVEVSDLKGLKIGVDGYSWLYKAITVHAADIYLKPNDPAVINKYV 60
Query: 57 DYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGNSSAS 115
C+ + L +G++ +FDG PMK + N++ R++K + + +E GN +
Sbjct: 61 SVCVKKCKALLAHGIELFFVFDGEEHPMK-KNTNQKRRAQKAEVQKKVEYFLKRGNLREA 119
Query: 116 YEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
+ + + + + L LK+ N+ Y+ APYEAD Q+ +L + ++ + TEDSDLI
Sbjct: 120 KSLMSRCMKVDVDMVNNLAIALKKMNIPYMTAPYEADPQLVYLERNGHIDCITTEDSDLI 179
Query: 176 PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLL----EMCILSGCDYLQSL 231
+G ++++FK+++ G M + + LS + LL E+ L GCDY +
Sbjct: 180 VYGANKVLFKLNELQGG-----EMFDRERILSRCSIPTKCLLTQLKEIVSLCGCDYTNGI 234
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
+GL AH L+ K+ + I++L V + + K + TF V DP
Sbjct: 235 SKVGLITAHKLMMMHKTVEGCIQYLAQKQSGVID-HIDICSKVICTFNMHVVKDPSCGQR 293
Query: 292 VHLSCISDNIGNDLDFLAKGIAIGDLDP 319
V+L S+ +D+ +G L+P
Sbjct: 294 VYLKGTSEKEADDISLFEDVSFLGLLEP 321
>gi|393233439|gb|EJD41011.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 195
Score = 137 bits (345), Expect = 2e-29, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 110/190 (57%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GL L + HI+ L G +++D Y LH+GAL+C+ E+ G PT+ ++
Sbjct: 1 MGVTGLFEFLNAKRSHSHIETLAGTRLSIDRYVVLHRGALTCACEMASGDPTTAYLHEVK 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +LRHY ++P +FDG +LP K +R RKE L A+ E +G+ S Y+
Sbjct: 61 RLLLMLRHYDIEPYFVFDGQVLPAKANVTRRRTAVRKEALLCAVTLEMKGDKRTSAVAYK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+VD++ + + I++L+ + Y+VAPYE D Q+ FL V+AV +E+SDL+ FG
Sbjct: 121 ASVDVTTQMVTQTIKILRAAGILYLVAPYEPDPQLVFLDRVGLVDAVYSENSDLVVFGVQ 180
Query: 181 RIIFKMDKFG 190
+++ K+ G
Sbjct: 181 KVVCKLQDNG 190
>gi|322799338|gb|EFZ20726.1| hypothetical protein SINV_14613 [Solenopsis invicta]
Length = 608
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 216/482 (44%), Gaps = 67/482 (13%)
Query: 99 NLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFL 158
N +A+E G + ++AVDI+ IA ELI+ +++N+ I+APYEADAQ+ +L
Sbjct: 2 NRRKAMELIQMGKIAEGSNLLRRAVDITHKIALELIKECQRENIDCIIAPYEADAQLAYL 61
Query: 159 AVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLE 218
+S + VITEDSDL FGC +I FKMD G GV + +L D+ F
Sbjct: 62 NISGIADVVITEDSDLTLFGCKKIFFKMDINGNGVLIERDLLHLAMDVRPEQFDMDKFRH 121
Query: 219 MCILSGCDYLQSLPGMGLKRA------------HALISKFKSYDK--VIKHLKYST---- 260
+ ILSGCDYL SLPG+GL +A H +I+ F ++ + V+ + Y
Sbjct: 122 IGILSGCDYLPSLPGIGLGKARKFITRNTDHNIHRVINTFLNFSRRTVLTKILYKCEEKS 181
Query: 261 -------------------VSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLS-----C 296
+ VPP Y +SF A +TF+HQ V+ P + L+
Sbjct: 182 IILKCYALVRVGSVLNMKGLVVPPEYRDSFILADITFKHQLVFCPLQRKQIRLNPPPADV 241
Query: 297 ISDNI---GNDLDF-LAKGIAIGDLDPFTQLPFQEVSDNSHLVVGQNSHLKNFKPESERK 352
D + G +LD LA +A+G+ DP T L + +V+ + KP ER+
Sbjct: 242 TEDQLQYAGEELDADLALQLALGNCDPAT-LEMVHNFNPDKIVINEQ------KPIRERE 294
Query: 353 KLDLPVQKNLLTKKFTTPRISPNHFSPEETSSLSPGEHHTAEASCDISCQSSSRME---- 408
L + + I+P+ PE+ L +T ++ D ++++ E
Sbjct: 295 SL----KDEYILVNSDNDLITPSDGLPED-QDLDETILNTYKSDQDAKLIANTKKESEDY 349
Query: 409 --LETVGNFPHNSSEKNCFASEVPEFSASPSREMENERNAEHTSLPQFCRSIRNPCPALR 466
LE V P +N F + + + SPS + +L + R+I + +
Sbjct: 350 LCLEDVNTSPE-LIRRNPFIKRISDLTTSPSVLSNKDCRKRGRNLMRIKRTIIDENTVVE 408
Query: 467 KEHENKNCTDSVVGKGRTENRKVIVRSSYFLHKQVNKDDQENKQEKLVVENDAAIDMSEN 526
++ +K D+ ++ENR + + + + D + E+ + + + D+++N
Sbjct: 409 SKYFSK--QDNEKHNDKSENRDIEINLKSMKYNMIPDTDTSDINEEQLEKMLSITDIAQN 466
Query: 527 TG 528
G
Sbjct: 467 AG 468
>gi|167522397|ref|XP_001745536.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775885|gb|EDQ89507.1| predicted protein [Monosiga brevicollis MX1]
Length = 1147
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 139/290 (47%), Gaps = 37/290 (12%)
Query: 18 HIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP--TSRHIDYCMHRVNLLRHYGVKPIL 75
H++E G VA+D +WL+KGA C+ EL + P T +I M RV +L+ +G+ P+L
Sbjct: 814 HVREYAGKRVAIDVAAWLYKGAYGCALEL-QSNPNDTDAYIRLVMSRVFMLKSFGITPVL 872
Query: 76 IFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQ 135
+FDG LP K Q R S + + + I C SA + + I
Sbjct: 873 VFDGASLPSKETQPRLRKPSSQVSTSPWI-C-----GSAVLQHVAAIKSVQTEGEANCIT 926
Query: 136 VLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEF 195
+ ++ YI+APYEADAQM ++ VEAVI+EDSDL+ F + FK+D G G+
Sbjct: 927 WYTRLSIEYIIAPYEADAQMAYMYHQGLVEAVISEDSDLLVFNVRDVFFKLDSSGFGIRI 986
Query: 196 QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP-----GMGLKRAHALISKFKSYD 250
Q L GCDYL + G+ LK A I++ +
Sbjct: 987 QLDNL-----------------------GCDYLPAYSDKHPRGVSLKVALDYINRCQGNL 1023
Query: 251 KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
K + L ++ + E+F +A TF HQ VYDP+ + VHL+ + N
Sbjct: 1024 KETQALLGRRHALHDGFSEAFEQADKTFLHQVVYDPRQKRRVHLTPLGTN 1073
>gi|326435344|gb|EGD80914.1| hypothetical protein PTSG_01498 [Salpingoeca sp. ATCC 50818]
Length = 971
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 24/328 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKG--ALSCSRELCKGLPTSRHIDY 58
MG+ GLL S M P+HI G V +D WL+KG S +G + +++
Sbjct: 1 MGVPGLLKFFASKMEPVHIDAYRGKRVGIDISGWLYKGCCGWSALDIFLRGSESDIFMEH 60
Query: 59 CMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA-SYE 117
+ ++ LL G+ P+++FDG + P+ E + R +KE C + N + E
Sbjct: 61 ALSKLELLLTRGIVPVVVFDGPISPIMKEGVRRERRDKKEIAQATAACLLDDNQPGLAAE 120
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPF 177
Q + +S ++ + ++L + V +++APYEADAQ+ FLA + Q++AV+TEDSD++
Sbjct: 121 ALQAGLYVSFAMRTRMARLLAEIGVEHVIAPYEADAQLAFLARTGQIDAVLTEDSDIVAL 180
Query: 178 GCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL-----QSLP 232
G ++ K + G+ +C + +DL G T L LSG DYL +
Sbjct: 181 GVKDVLLKFGRNGE----RCGQRIRFEDL---GVTLDELQVAAHLSGSDYLPKSSVHHIR 233
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKYST-VSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
GMG RA L+ + + +++ L+ S ++ P + + ++ F+ Q V +
Sbjct: 234 GMGFVRAMKLVRAAPNLEHLLQALEGSIKYTLHPAFRQQLLNSLYAFRCQAVLNNGN--- 290
Query: 292 VHLSCISDNIGNDLDFLAKGIAIGDLDP 319
+ + G DF+ + DL P
Sbjct: 291 -----LEEQTGRWSDFVGEVAPSQDLWP 313
>gi|84996213|ref|XP_952828.1| exonuclease 1 [Theileria annulata strain Ankara]
gi|65303826|emb|CAI76203.1| exonuclease 1, putative [Theileria annulata]
Length = 868
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 10 LKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHY 69
LKS ++IK+ GC A+D W+H+G +S + + +++ + + + LL
Sbjct: 317 LKSNEKNVNIKKYSGCVAAIDAMCWIHRGLISSAVANVRNEICDKYMKFIISMLQLLIKL 376
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQK---AVDIS 126
+ PI++FDG +P K + R R + + A+E + + E +K A+ I+
Sbjct: 377 NITPIMVFDGYEMPAKKNENMMRRERRNKARSEAMEMIHKNKGKINTEIMRKCMQAIQIT 436
Query: 127 PSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM 186
P I H +I + K+ NV+ +V+PYEADAQ+++L + + I+EDSDLI +GC +II+K+
Sbjct: 437 PEIVHRVITICKKINVTVVVSPYEADAQISYLCRTGVADFAISEDSDLIVYGCPKIIYKL 496
Query: 187 DKFGQGVEFQCSMLQKNKDL 206
+K G+GVE K L
Sbjct: 497 NKEGKGVELNIPFFNKQNKL 516
>gi|350416440|ref|XP_003490949.1| PREDICTED: flap endonuclease 1-like [Bombus impatiens]
Length = 381
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 13/300 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI GL L+ I P IKE E G VA+D L++ ++ E +
Sbjct: 1 MGILGLSKLIADIA-PSAIKEQELKHYFGRKVAIDASMCLYQFLIAVRSEGAQLTSVNGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KRA R E E GN
Sbjct: 60 TTSHLMGTFYRTIRLVEQGIKPVYVFDGKPPNLKGGELAKRAERRDETQKLLRAAEEAGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ A E Q+L+ + YI AP EA+AQ L + +V A TED
Sbjct: 120 AEDIEKFNRRLVKVTKEHAKEAKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ ++ + F + + +K L G +++CI+ GCDY S+
Sbjct: 180 MDALTFGCN-VLLRRLTFSEARKMPVQEFHFDKVLKDLGLNHDEFIDLCIMLGCDYTSSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA LI +S +K++++L +P + ++ +A L FQ V DP+T D+
Sbjct: 239 KGVGPKRAIELIKTHRSLEKIVENLDTKKFPIPEDW--NYKEARLLFQEPEVTDPETIDL 296
>gi|110766831|ref|XP_395769.3| PREDICTED: flap endonuclease 1 [Apis mellifera]
Length = 379
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 13/310 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI GL L+ I P IKE E G +A+D L++ ++ E +
Sbjct: 1 MGILGLAKLIADIA-PNAIKEQELKHYFGRKIAIDASMCLYQFLIAVRSEGAQLTSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KRA R E E GN
Sbjct: 60 TTSHLMGMFYRTIRLVEQGIKPVYVFDGKPPNLKGGELAKRAEKRDEAQKLLQAAEEAGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ A E Q+LK + YI AP EA+AQ + + +V A TED
Sbjct: 120 AEDIEKFNRRLVKVTKEHADEAKQLLKLMGIPYIDAPCEAEAQCAAMVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ I+ + F + + ++K L + +++CI+ GCDY S+
Sbjct: 180 MDALTFGCN-ILLRRLTFSEARKMPVQEFHQDKVLEGLELSHDEFIDLCIMLGCDYTNSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA LI ++ +K+I++L +P + ++ +A L FQ V DP+T D+
Sbjct: 239 KGVGPKRAIELIKTHRTLEKIIENLDTKKFPIPEDW--NYKQARLLFQEPEVTDPETIDL 296
Query: 292 VHLSCISDNI 301
+ +N+
Sbjct: 297 KWIEPDEENL 306
>gi|300121855|emb|CBK22429.2| DNA repair protein (XPGC) [Blastocystis hominis]
Length = 389
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Query: 63 VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKA 122
+ LLR + ++PI +FDG P K + +RA R+ L E S+G+ + + +
Sbjct: 2 IKLLRRFSIQPIFVFDGAKFPAKRHTDEQRALIRQTKLKEGKELASQGDIKKATGIFTQT 61
Query: 123 VDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRI 182
+ IS ++ E++ + + + YI++PYE+DA++ FL+ + V+AV+++DSD + F C +
Sbjct: 62 ISISKAMMEEVLHLCIRLQIPYIISPYESDAELAFLSRTGIVDAVMSDDSDSLCFRCPCV 121
Query: 183 IFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHAL 242
++K+ G E L + + + +T + +CILSGCDYL +LP + LK A
Sbjct: 122 LYKLTDTGICKEVCLEKLLHSDEFTSFPWTCDLFEFLCILSGCDYLDNLPYIRLKTAKKY 181
Query: 243 ISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
I S + V ++ K Y+ + + L+F+HQ V+DP
Sbjct: 182 IQLCGSEENVFPYVAKLPVHQYSSNYQSNLNRTRLSFRHQIVFDP 226
>gi|195579936|ref|XP_002079812.1| GD21820 [Drosophila simulans]
gi|194191821|gb|EDX05397.1| GD21820 [Drosophila simulans]
Length = 604
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+A LI+ + +NV IVAPYEADAQM +L + + +ITEDSDL FG IIFK+D
Sbjct: 1 MALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAKNIIFKLDL 60
Query: 189 FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKS 248
G G+ + L + + MCILSGCDYL SLPG+GL +A I K +
Sbjct: 61 NGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKACKFILKTEQ 120
Query: 249 YD------KVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISD--- 299
D K+ +L + V Y E+F KA TF+H +Y+P + L + D
Sbjct: 121 EDMRIALKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRLCSLEDYET 180
Query: 300 ------NIGNDLD--FLAKGIAIGDLDPFT 321
N G L+ A +A+G+L+PFT
Sbjct: 181 DERYCSNAGTLLEDSVQALHLALGNLNPFT 210
>gi|380015033|ref|XP_003691516.1| PREDICTED: flap endonuclease 1-like [Apis florea]
Length = 383
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 13/300 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGL----P 51
MGI GL L+ I P IKE E G +A+D L++ ++ E +
Sbjct: 1 MGILGLAKLIADIA-PNAIKEQELKHYFGRKIAIDASMCLYQFLIAVRSEGAQLTSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ IFDG +K + KRA R E E GN
Sbjct: 60 TTSHLMGMFYRTIRLVEQGIKPVYIFDGKPPNLKGGELAKRAEKRDEAQKLLQAAEEAGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ A E Q+LK + YI AP EA+AQ + + +V A TED
Sbjct: 120 AEDIEKFNRRLVKVTKEHAEEAKQLLKLMGIPYIDAPCEAEAQCAAMVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ I+ + F + + ++K L + +++CI+ GCDY S+
Sbjct: 180 MDALTFGCN-ILLRRLTFSEARKMPVQEFHQDKVLEGLELSHDEFIDLCIMLGCDYTNSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA LI ++ +K++++L +P + ++ +A L FQ + DP+T D+
Sbjct: 239 KGVGPKRAIELIKTHRTLEKIVENLDTKKFPIPEDW--NYKQARLLFQKPEITDPETIDL 296
>gi|390334353|ref|XP_001198417.2| PREDICTED: uncharacterized protein LOC762697 isoform 1
[Strongylocentrotus purpuratus]
Length = 964
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+A +++ ++ V IVAPYEADAQ+ +L + V+AVITEDSDLI FGC ++I K+D
Sbjct: 1 MALNVMKAVRSLGVDCIVAPYEADAQLAYLEKNGFVQAVITEDSDLIAFGCKKVIVKLDL 60
Query: 189 FGQGVEFQCSMLQKNKDLSFG-GFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFK 247
G ++ S L N + G FT + MCI++GCDYL SLPG+G+ +A L
Sbjct: 61 AGNCMDVDSSRL--NVAMKIGEKFTPEKFRYMCIVAGCDYLASLPGIGIGKARKLFQLTA 118
Query: 248 SYD--KVIKH----LKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNI 301
+ D +VIK LK + +V P Y+E F +A TF +Q +DP+ + + L+ S +
Sbjct: 119 NPDITQVIKRMATTLKMKSTTVTPEYQEGFVQANNTFLYQLAFDPQKKKLQPLTPYSPEV 178
>gi|401414008|ref|XP_003886451.1| hypothetical protein NCLIV_068500 [Neospora caninum Liverpool]
gi|325120871|emb|CBZ56426.1| hypothetical protein NCLIV_068500 [Neospora caninum Liverpool]
Length = 620
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 142/335 (42%), Gaps = 87/335 (25%)
Query: 1 MGIQGLLPLLKS-IMIPIHIKELEGCCVAVDTYSWLHKGALSCS---------------- 43
MG++GL L S I H++E G +AVD SWLHK A C+
Sbjct: 1 MGVKGLWNWLGSNIKERTHLREFSGKTIAVDASSWLHKAACGCALALLLFEETRRLQSAD 60
Query: 44 ---------------RELCKGLPTSRH-----------------IDYCMHRVNLLRHYGV 71
RE G + + +C+ ++ LL +G+
Sbjct: 61 GEPRGPRTGVDGERPREAAGGKAFQKENGDDEDIADECEAYHQILRFCLGKIRLLTSFGI 120
Query: 72 KPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAH 131
+P L+F+GG L K R +R+ + +A+ G+ ++ A+ +S S+ +
Sbjct: 121 RPFLVFEGGQLEAKAPANESRRLTRERHAVQAVAAHRAGDVGSARRHAVGAISVSLSLRN 180
Query: 132 ELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+ + L+ V I A YEADAQM LA V+AV+TED DL+ + ++I
Sbjct: 181 FVFRKLQSSPGVICIAAAYEADAQMARLAADGLVDAVLTEDGDLLAYQARKLI------- 233
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKS-Y 249
C+L+GCDY ++PG+G++ A L+ K+ +
Sbjct: 234 -----------------------------CVLAGCDYAPNIPGVGVRTAARLVQKYGADV 264
Query: 250 DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY 284
+++ L+ S +P Y A+LT++HQ V+
Sbjct: 265 HAILQDLRASGKPIPNNYAHQIRVALLTYRHQTVF 299
>gi|307173481|gb|EFN64391.1| Flap endonuclease 1-B [Camponotus floridanus]
Length = 382
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 15/300 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI GL L+ I P IKE E G +A+D L++ ++ E +
Sbjct: 1 MGILGLSKLIADIA-PEAIKERELKHYFGRKIAIDASMCLYQFLIAVRSEGAQLTTVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ HR L G+KP+ +FDG +K + KRA R E E +GN
Sbjct: 60 TTSHLMGTFHRTIRLVEQGIKPVYVFDGKPPNLKSGELAKRAERRDEAQKLLQAAEEDGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
A +F ++ V ++ + A E Q+L+ + YI AP EA+AQ L + +V A TED
Sbjct: 120 VEAIDKFSRRLVKVTKNHADEAKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC I+ + + + + +K L+ +++CI+ GCDY S+
Sbjct: 180 MDALTFGCD-ILLRRLTLSEARKLPVQEIHMDKVLTGLELNHDEFIDLCIMLGCDYTGSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA LI ++S DK+I+++ +P + ++ +A L FQ V + EDI
Sbjct: 239 KGVGPKRAIELIKNYRSLDKIIENIDTKKYPIPENW--NYKEARLLFQEPEVAN--AEDI 294
>gi|307214986|gb|EFN89831.1| Flap endonuclease 1-B [Harpegnathos saltator]
Length = 380
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI GL L+ I P IKE E G +A+D L++ ++ E +
Sbjct: 1 MGILGLSKLIADIA-PEAIKERELKHYFGRKIAIDASMCLYQFLIAVRSEGAQLTTVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KRA R E E +G+
Sbjct: 60 TTSHLMGIFYRTIRLVEQGIKPVYVFDGKPPNLKGGELAKRAERRDEAQKLLQAAEEDGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ A +F ++ V ++ + A E Q+LK + YI AP EA+AQ L + +V A TED
Sbjct: 120 AEAIDKFNRRLVKVTKTHAEEAKQLLKLMGIPYIDAPCEAEAQCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ ++ ++ F + + + +K L +++CI+ GCDY S+
Sbjct: 180 MDALTFGCNVLLRRLT-FSEARKLPVQEIHFDKVLGGLELNHNEFIDLCIMLGCDYTGSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV-------- 283
G+G KRA LI KS +K+I+++ VP + ++ +A L FQ V
Sbjct: 239 KGVGPKRAIELIKNHKSLEKIIENIDTKKFPVPEDW--NYKEARLLFQEPEVSNADDIVL 296
Query: 284 --YDPKTEDIVHLSC 296
+P ED+V C
Sbjct: 297 KWSEPDEEDLVKFLC 311
>gi|70945133|ref|XP_742419.1| exonuclease i [Plasmodium chabaudi chabaudi]
gi|56521393|emb|CAH77360.1| exonuclease i, putative [Plasmodium chabaudi chabaudi]
Length = 910
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LL LK I+ HI + E V VD W+H+G +SC+ ++ ++ +
Sbjct: 1 MGISNLLQFLKPIIKNTHISKYENGVVGVDIMCWIHRGLISCAFDIVTDNHNENYLSFIE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ + Y +K I +FDG LP K + + R R++ A+E + S E
Sbjct: 61 KMLETIHQYNIKVIFVFDGDELPEKKRENSIRKARREKAKEEALEIIKKVKHPRSNELVI 120
Query: 121 K----AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
K A+ +S I +I K++N+ YI++PYEADAQ+++L + I+EDSDL+
Sbjct: 121 KKCIQAISVSKEIIQSVINFCKKKNIYYIISPYEADAQLSYLCRMGFISCAISEDSDLLV 180
Query: 177 FGCSRIIFKMDKFGQ 191
+GC R+++K G+
Sbjct: 181 YGCPRVLYKFKNTGE 195
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 211 FTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKV----IKHLKYSTVSVP 264
F M L MCILSGCDY + GMG+K A LI ++K+ + I H K+ +P
Sbjct: 335 FNLDMFLAMCILSGCDYTNDFHIAGMGIKTAFNLIYEYKTIQNIFSFLISHDKWKN-KIP 393
Query: 265 PFYE------ESFGKAVLTFQHQRVYD 285
P + E + + F +VYD
Sbjct: 394 PNLDSLDKLMEKYNEIKNAFLQHQVYD 420
>gi|156553807|ref|XP_001603401.1| PREDICTED: flap endonuclease 1-like [Nasonia vitripennis]
Length = 381
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 13/300 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI GL L+ + P IKE E G +A+D L++ ++ E +
Sbjct: 1 MGILGLSKLIADVA-PEAIKECELKHLFGRKIAIDASMCLYQFLIAVRSEGAQLTSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KRA R+E + E GN
Sbjct: 60 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPTLKGGELAKRAERREEAQKQLQAAEEAGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E Q+L + +I AP EA+AQ + S +V A TED
Sbjct: 120 VEDVDKFNRRLVKVTKQHGEEAKQLLTLMGIPFIDAPCEAEAQCAAMVKSGKVYATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ ++ ++ F + + +Q +K L+ G T+ +++CI+ GCDY S+
Sbjct: 180 MDALTFGCNVLLRRL-TFSEARKMPIQEIQYDKVLNGLGLTRDEFIDLCIMLGCDYTTSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA LI KS +K++++L VP + ++ A F V DP+ D+
Sbjct: 239 KGVGPKRAIELIKNHKSLEKILENLDTKKFPVPEDW--NYKDARQLFIEPEVKDPEEVDL 296
>gi|402470077|gb|EJW04530.1| hypothetical protein EDEG_04217 [Edhazardia aedis USNM 41457]
Length = 211
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 120/210 (57%), Gaps = 3/210 (1%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL P++K I+ I + + VD +SWL++ A + EL +PT++H +
Sbjct: 1 MGITGLHPIIKPILSRKSIISYKNRTIGVDGHSWLYQIAHIVAEELFYKIPTTKHAKPFL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI-ECESEGNSSASYEFY 119
++ L+ ++ + +FDG +L K E+ N + RKE + + + GN S +
Sbjct: 61 EKIKKLQRNAIRLVFVFDGDILVSK-EKTNNERKIRKEKIKEVVHDYLKAGNLSRAKMLM 119
Query: 120 QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGC 179
++ V I+ + +I +L+++N+ +I++PYE+DAQ+ +L ++ ++TEDSDL+ +G
Sbjct: 120 KQCVSINSDFLNVIIDLLRRENIEFIISPYESDAQLCYLQKIGYIDYILTEDSDLVVYGA 179
Query: 180 SRIIFKMDKFGQGVEFQCSMLQKNKDLSFG 209
+I++K D +E+Q SML K KD F
Sbjct: 180 DKILYKFDG-SYVLEYQKSMLNKAKDDFFA 208
>gi|383859686|ref|XP_003705323.1| PREDICTED: flap endonuclease 1-like [Megachile rotundata]
Length = 383
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 13/292 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI GL L+ I P IKE E G VA+D L++ ++ E +
Sbjct: 1 MGILGLAKLIADIA-PHAIKEKELKHYFGRKVAIDASMCLYQFLIAVRSEGAQLATVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KPI +FDG +K + KRA R E E GN
Sbjct: 60 TTSHLMGMFYRTIRLVEQGIKPIYVFDGKPPNLKGGELAKRAEKRDEAQKLLQAAEEAGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ A E Q+LK + Y+ AP EA+AQ L + +V A TED
Sbjct: 120 AEDIEKFNRRLVKVTQVHADEAKQLLKLMGIPYVEAPCEAEAQCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ ++ ++ F + + +K L G + +++CI+ GCDY S+
Sbjct: 180 MDALTFGCNVLLRRLT-FSEARKMPVQEFHHDKVLEGLGLNQDEFIDLCIMLGCDYTNSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV 283
G+G KRA LI +S +K++++L + VP + ++ +A L FQ V
Sbjct: 239 KGVGPKRAMELIKTHRSLEKILENLDTNKYPVPEDW--NYKQARLLFQEPEV 288
>gi|340717150|ref|XP_003397050.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Bombus
terrestris]
Length = 381
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 13/297 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI GL L+ I P IKE E G VA+D L++ ++ + +
Sbjct: 1 MGILGLSKLIADIA-PSAIKEQELKHYFGRKVAIDASMCLYQFLIAVRSDGAQLTSVHGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KR R E E GN
Sbjct: 60 TTSHLMGTFYRTIRLVEQGIKPVYVFDGKPPDLKGGELAKRDERRDETQKLLQAAEEAGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ A E Q+L+ + YI AP EA+AQ L + +V A TED
Sbjct: 120 AKDIEKFNRRLVKVTKEHALETKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ I+ + F + + +K L G +++CI+ GCDY S+
Sbjct: 180 MDALTFGCN-ILLRRLTFSEARKMPVQEFHFDKVLEDLGLNHNEFIDLCIMLGCDYTSSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
G+G KRA LI S +K++++L S+P + ++ +A L FQ V DP+T
Sbjct: 239 KGVGPKRAIELIKTHGSLEKIVENLDTKKFSIPEDW--NYKEARLLFQEPEVTDPET 293
>gi|159110627|ref|XP_001705564.1| Exonuclease 1 [Giardia lamblia ATCC 50803]
gi|157433651|gb|EDO77890.1| Exonuclease 1 [Giardia lamblia ATCC 50803]
Length = 705
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 177/419 (42%), Gaps = 62/419 (14%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL ++ I I +L G +D + +LH A+ + L S ID +
Sbjct: 1 MGISGLLTAIRRAQW-IKITQLRGSSFVIDGHCFLHAAAILDPKALVLKNNISGVIDVMV 59
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V + L+FDGG LP K ++R ++R +LA A S G+S + +
Sbjct: 60 QLVGSILPSATFVTLVFDGGSLPSKTFTNSRRKQARDASLALAEAYSSAGDSEEAENALK 119
Query: 121 KAVDIS----PSIAHELIQVL-KQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
KA+ S IA+ + + L K N + ++APYEADAQ+ +L + ++T DSD++
Sbjct: 120 KAISFSNLQVSRIANGVFKRLEKHDNFAVLIAPYEADAQVAYLQKLGMGDVIVTNDSDIL 179
Query: 176 PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGF------------------------ 211
+G + ++K + + G F L DL GF
Sbjct: 180 LYGPRKALYKYN-WRTGTGF----LSTIDDLYLNGFESLNTPKVSSRVAALVDNTEPNRI 234
Query: 212 -TKQMLL------EMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
T +L + CILSGCDY SL G+GL + + K + L+Y
Sbjct: 235 ATGTVLARHLRFQQACILSGCDYTPSLVGVGLITSVNTVGKTDGIVSAAQILRYGHHKKL 294
Query: 265 PFYEESFG-------KAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGIAIGDL 317
P ESF +A LTF++ V+DP + ++V ++ G + FL +
Sbjct: 295 PGDVESFDEYVHLILQAYLTFRYHHVFDPLSFEVVPFHPFNEEDGQLIKFLNQWCYGAPF 354
Query: 318 DPFTQ----------LPFQEVSDNSHLVVGQNSHLKNFKPESERKKLDLPVQKNLLTKK 366
PF LPF DNS ++ + KP S+R L +P+ T K
Sbjct: 355 TPFEACLACTGILHPLPFTRSIDNSSPECPPST---SRKPRSDRSNLPVPLALQYQTLK 410
>gi|167540341|ref|XP_001733568.1| exonuclease [Entamoeba dispar SAW760]
gi|165893425|gb|EDR21682.1| exonuclease, putative [Entamoeba dispar SAW760]
Length = 258
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 107/187 (57%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI+ LLP + SI+ I + + A+D Y+ LH+ A R++ ++ +
Sbjct: 1 MGIKQLLPFVSSIIHKSSIDKFKNKKAAIDGYALLHRIATRNPRQVVVNNDYFFIVNGML 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ + + PI +FDG LP K E +R + RK + A++ E EGN + ++
Sbjct: 61 EYLKFFNIHKIIPIFVFDGATLPSKKLIEEERLKRRKSAYSNALKYEKEGNQIEALICWK 120
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+DI+P A ++I ++ V IVAPY ADAQM +L+ + V+ VI EDSD+IP+GCS
Sbjct: 121 QAIDITPFHASKVINAFHKRGVQCIVAPYGADAQMAYLSRTGYVDVVICEDSDMIPYGCS 180
Query: 181 RIIFKMD 187
++FK++
Sbjct: 181 VVLFKLN 187
>gi|389582322|dbj|GAB64877.1| exonuclease I [Plasmodium cynomolgi strain B]
Length = 1312
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 112/198 (56%), Gaps = 10/198 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP LK I HI + + + VD W+H+G +SC+ ++ ++ +
Sbjct: 1 MGITNLLPFLKPIAKNTHISKYKNEVIGVDIMCWIHRGLISCAYDVVTDNYNDSYLSFIE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMK----IEQENKRARSRKENLARAIECESEGNSSASY 116
+ + HY +K + +FDG LP K + ++++R +++KE A+ I +S N +
Sbjct: 61 KMLECINHYNIKVVFVFDGEELPEKKAENLIRKDRREKAKKE--AQEI-IKSVANPRSDE 117
Query: 117 EFYQK---AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
+K A+ +S I + +I K++N+ YI++P+EADAQ+++L + I+EDSD
Sbjct: 118 RVLKKCIQAISVSKDIINTVIHFCKKKNIDYIISPFEADAQLSYLCRMGYISCAISEDSD 177
Query: 174 LIPFGCSRIIFKMDKFGQ 191
L+ +GC R+++K+ G+
Sbjct: 178 LLVYGCPRVLYKLKSTGE 195
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 13/87 (14%)
Query: 211 FTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKV----IKHLKYSTVSVP 264
F+ M L MCILSGCDY + GMG+K A +LIS++K+ + + I H ++ +P
Sbjct: 338 FSIDMFLAMCILSGCDYTNDFHITGMGIKTAFSLISQYKTIENIFSFLISHDRWKR-KIP 396
Query: 265 PFYE------ESFGKAVLTFQHQRVYD 285
P + + F H +VYD
Sbjct: 397 PNLNTLEKLLSKYEEIKNAFLHHQVYD 423
>gi|156093472|ref|XP_001612775.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801649|gb|EDL43048.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1247
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 112/198 (56%), Gaps = 10/198 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP LK I HI + + + VD W+H+G +SC+ ++ ++ +
Sbjct: 28 MGITNLLPFLKPIAKSTHISKYKNEVIGVDIMCWIHRGLISCAYDIVTDTYNDSYLSFIE 87
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMK----IEQENKRARSRKENLARAIECESEGNSSASY 116
+ + HY +K + +FDG LP K + ++++R +++KE A+ I +S N +
Sbjct: 88 KMLECIYHYNIKVVFVFDGEELPEKKAENVIRKDRREKAKKE--AQEI-IKSVPNPRSDE 144
Query: 117 EFYQK---AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
+K A+ +S I + +IQ + +N+ YI++P+EADAQ+++L + I+EDSD
Sbjct: 145 NVLKKCIQALSVSKEIINTVIQFCRTKNIDYIISPFEADAQLSYLCRMGYISCAISEDSD 204
Query: 174 LIPFGCSRIIFKMDKFGQ 191
L+ +GC R+++K+ G+
Sbjct: 205 LLVYGCPRVLYKLKSTGE 222
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 13/87 (14%)
Query: 211 FTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKV----IKHLKYSTVSVP 264
F+ M L MCILSGCDY + GMG+K A +LIS++K+ + + I H ++ +P
Sbjct: 341 FSIDMFLAMCILSGCDYTNDFHITGMGIKTAFSLISQYKTIENIFSFLISHDRWKR-KIP 399
Query: 265 PFYE------ESFGKAVLTFQHQRVYD 285
P + + F H +VYD
Sbjct: 400 PNLNTLEKLMTKYEEIKNAFLHHQVYD 426
>gi|58390636|ref|XP_317855.2| AGAP011448-PA [Anopheles gambiae str. PEST]
gi|74802123|sp|Q7Q323.2|FEN1_ANOGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55237026|gb|EAA13029.2| AGAP011448-PA [Anopheles gambiae str. PEST]
Length = 383
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI+GL L+ I P +KE E G VA+D L++ ++ E +
Sbjct: 1 MGIKGLSQLIADIA-PFAVKEGEIKQFFGRKVAIDASMCLYQFLIAVRAEGAQLTSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + NKRA R+E +A++ +E
Sbjct: 60 TTSHLMGTFYRTIRLLENGIKPVYVFDGKPPDLKSGELNKRA-ERREEAQKALDKATEAG 118
Query: 112 SSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
++ E F ++ V ++ A+E ++L+ V Y+ AP EA+AQ L + +V A TE
Sbjct: 119 ATEDIEKFNRRLVKVTKHHANEAKELLRLMGVPYVEAPCEAEAQCAALVRAGKVYATATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG S I+ + F + + K L T+ +++CIL GCDY +
Sbjct: 179 DMDALTFG-SNILLRHLTFSEARKMPVQEFAYEKVLKGFELTQDEFIDLCILLGCDYCDT 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+ G+G K+A LI+K +S +K+++HL VP + ++ +A F+ V D T
Sbjct: 238 IRGIGPKKAIELINKHRSIEKILEHLDRQKYIVPEGW--NYEQARKLFKEPEVQDADT 293
>gi|71028278|ref|XP_763782.1| exonuclease I [Theileria parva strain Muguga]
gi|68350736|gb|EAN31499.1| exonuclease I, putative [Theileria parva]
Length = 550
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 14/220 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ LL LKS ++IK+ GC A+D W+H+G +S + + +++ + +
Sbjct: 1 MGVTNLLQHLKSNEKNVNIKKYSGCVAAIDAMCWIHRGLISSAVANVRNEICDKYMKFII 60
Query: 61 HRVNLLRHYGVKPIL-----------IFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
+ LL + PI+ +FDG +P K + + R R + A A+E +
Sbjct: 61 SMLQLLIKLSITPIMGKNLNCVSIISVFDGYEMPAKKNENSIRRERRNKARAEALEMIRK 120
Query: 110 GNSSASYEFYQK---AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
+ E +K A+ I+P I H +I + K+ NVS +V+PYEADAQ+++L + +
Sbjct: 121 NKGKINTEIMRKCMQAIQITPEIVHRVITICKKVNVSVVVSPYEADAQISYLCRTGIADF 180
Query: 167 VITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDL 206
I+EDSDLI +GC +IIFK++K G+GVE K L
Sbjct: 181 AISEDSDLIVYGCPKIIFKLNKEGKGVELNVPFFNKQNKL 220
>gi|378755169|gb|EHY65196.1| hypothetical protein NERG_01642 [Nematocida sp. 1 ERTm2]
Length = 233
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 9/233 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-----TSRH 55
MGI GLLP+LK+ + + + +L+G + VD YSWL+K A++ P +++
Sbjct: 1 MGITGLLPMLKNHIDYVEVSDLKGLKIGVDGYSWLYK-AITVHASDIYLRPKDPEVINKY 59
Query: 56 IDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGNSSA 114
+ +C+ + L +GV+ +FDG PMK + N++ R RK + +E + GN
Sbjct: 60 VSFCIRKCQALIAHGVELFFVFDGEEHPMK-KSTNQKRRDRKAQMQSKVEHLIARGNIRD 118
Query: 115 SYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDL 174
+ + + + + L LK+ NV +++APYEAD Q+ +L +++ + TEDSDL
Sbjct: 119 ARPLMSRCMKVDADMVSNLAAALKKINVPHMIAPYEADPQLVYLEKKGRIDCITTEDSDL 178
Query: 175 IPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
I +G +I+FK+++ G + + + L Q L E+ LSGCDY
Sbjct: 179 IVYGAKKILFKLNEAHGGELYNREKILASCSLPIKCLLTQ-LKEIVSLSGCDY 230
>gi|332021297|gb|EGI61676.1| Flap endonuclease 1-B [Acromyrmex echinatior]
Length = 381
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 13/295 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI GL L+ + P IKE E G +A+D L++ ++ E +
Sbjct: 1 MGILGLSKLIADVA-PEAIKERELKHYFGRKIAIDASMCLYQFLIAVRSEGAQLTTVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KRA R E E +GN
Sbjct: 60 TTSHLMGTFYRTIRMVEQGIKPVYVFDGKPPNLKSGELTKRAERRDEAQKLLQAAEEDGN 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
A +F ++ V ++ + A E ++L+ + Y+ AP EA+AQ L + +V A TED
Sbjct: 120 VEAIDKFNRRLVKVTKTHADEAKELLQLMGIPYVDAPCEAEAQCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC+ ++ ++ F + + + +K L+ +++CI+ GCDY S+
Sbjct: 180 MDALTFGCNVLLRRL-TFSEARKLPVQEIHFDKVLAGLELNHNEFIDLCIMLGCDYTNSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
G+G KRA LI +S +K+I+++ +P + ++ A L FQ V +P
Sbjct: 239 KGVGPKRAIELIKNHRSLEKIIENIDVKKYPIPEDW--NYKDARLLFQEPEVSNP 291
>gi|312385968|gb|EFR30352.1| hypothetical protein AND_00127 [Anopheles darlingi]
Length = 385
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 25/324 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI+GL L+ + P +KE E G VA+D L++ ++ E +
Sbjct: 1 MGIKGLSQLIADVA-PFAVKEGEIKTFFGRKVAIDASMCLYQFLIAVRAEGAQLTSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + NKRA R+E +A++ +E
Sbjct: 60 TTSHLMGTFYRTIRLLENGIKPVYVFDGKPPELKSGELNKRA-ERREEAQKALDKATEAG 118
Query: 112 SSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ E F ++ V ++ A+E ++L+ V Y+ AP EA+AQ L + +V A TE
Sbjct: 119 AVEDIEKFNRRLVKVTKQHANEAKELLRLMGVPYVEAPCEAEAQCAALVKAGKVYATATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG S I+ + F + + K L T ++MCIL GCDY +
Sbjct: 179 DMDALTFG-SNILLRHLTFSEARKMPVQEFHYEKVLKGFELTADEFIDMCILLGCDYCDT 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD----- 285
+ G+G K+A LI+K +S +++++HL S VP + ++ +A F+ V D
Sbjct: 238 IRGIGPKKAIELINKHRSIEQILEHLDKSKYVVPEDW--NYQQARRLFKEPEVADAAEIE 295
Query: 286 -----PKTEDIVHLSCISDNIGND 304
P E +V C D
Sbjct: 296 LKWSEPDEEGLVKYLCGDRQFNED 319
>gi|68070235|ref|XP_677029.1| exonuclease i [Plasmodium berghei strain ANKA]
gi|56496982|emb|CAI05734.1| exonuclease i, putative [Plasmodium berghei]
Length = 878
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LL LK I+ HI + + V VD W+H+G + C+ ++ ++ +
Sbjct: 1 MGISNLLQFLKPIVKNTHISKYQNGIVGVDIMCWIHRGLIGCAFDVVTDNHNENYLSFIE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ + Y +K I +FDG LP K ++ R R++ A+E + + S E
Sbjct: 61 KMLEAIYQYNIKVIFVFDGEELPEKKKENLIRKARREKAKDEALEIIKKVKNPRSNELVI 120
Query: 121 K----AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
K A+ +S I +I K++N+ YI++PYEADAQ+++L + I+EDSDL+
Sbjct: 121 KKCIQAITVSKEIIQSVINFCKKKNIYYIISPYEADAQLSYLCRMGFISCAISEDSDLLV 180
Query: 177 FGCSRIIFKMDKFGQGVE 194
+GC R+++K G+ E
Sbjct: 181 YGCPRVLYKFKNTGECNE 198
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 28/120 (23%)
Query: 211 FTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKV----IKHLKYSTVSVP 264
F M L MCILSGCDY + GMG+K A LI + K+ + I H K+ +P
Sbjct: 322 FNLDMFLAMCILSGCDYTNDFHISGMGIKTAFNLIYEHKTIQNIFSFLISHNKWKN-KIP 380
Query: 265 PFYE------ESFGKAVLTFQHQRVYDPKTEDIV---------------HLSCISDNIGN 303
P + E + + F VYD I+ +L C SDNI N
Sbjct: 381 PNLDSLDKLMEKYNEIKNAFLQHHVYDFILNKIIPIHHSFQSFFKKETSNLLCNSDNINN 440
>gi|193659550|ref|XP_001944971.1| PREDICTED: flap endonuclease 1 [Acyrthosiphon pisum]
Length = 380
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 13/300 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI GL L+ P IKE E G +A+D L++ ++ E +
Sbjct: 1 MGITGLAKLIADFA-PNAIKENEIKNHFGRKIAIDASMSLYQFLIAVRSEGAQLTSADGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ HI +R L G+KP+ +FDG MK + KRA R+E + E G+
Sbjct: 60 TTSHIMGTFYRTIRLLENGIKPVYVFDGKPPQMKSSELEKRADRRQEAQKSLEKAEEAGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ +F ++ V ++ + E ++LK V ++ AP EA+AQ + + +V A TED
Sbjct: 120 ATGIDKFSKRLVKVTSTHTTECKELLKLMGVPFVEAPCEAEAQCAAMVKAGKVYATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S ++ + F + + Q + L ++ +++CIL GCDY S+
Sbjct: 180 MDALTFG-SPVLLRHMTFSEARKMPIQEFQLDSVLETMEMSRDEFIDLCILLGCDYCNSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA L+ ++KS + +I++L VP + + +A F + DP+T D+
Sbjct: 239 KGVGPKRAIELMRQYKSLENIIENLDTKKYQVPEDW--PYKEARRLFIEPEITDPETIDL 296
>gi|405953608|gb|EKC21238.1| Flap endonuclease 1-A [Crassostrea gigas]
Length = 376
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 141/296 (47%), Gaps = 13/296 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI GL LL P +KE E G VAVD Y +L S + +
Sbjct: 1 MGILGLSKLLGDYA-PSAMKENEFKNYFGRKVAVDASMCIYQFLIAVRQDGSNLMNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG MK + KR R+E + + E G+
Sbjct: 60 TTSHLMGMFYRTIRMVENGIKPVYVFDGKPPDMKSGELAKRKERREEAQKQLEKAEEAGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V +S E ++LK + +I AP EA+AQ L + +V A TED
Sbjct: 120 EENIEKFNRRLVKVSKQHNEECKELLKYMGIPFINAPGEAEAQCAALVKAGKVYATGTED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + N+ L G TK +++CIL GCDY S+
Sbjct: 180 MDALTFGTT-VLLRNLTVAEARKLPIKEYYYNRVLEELGLTKDEFIDLCILLGCDYCDSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
G+G KRA LI + K+ D+++KHL +VP + + +A FQ V DP+
Sbjct: 239 RGIGPKRAIDLIKQHKTIDEILKHLDSKKYTVPEDW--MYKEARRLFQEPEVADPE 292
>gi|68061681|ref|XP_672841.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490237|emb|CAI02321.1| hypothetical protein PB300668.00.0 [Plasmodium berghei]
Length = 264
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 6/196 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LL LK I+ HI + + V VD W+H+G + C+ ++ ++ +
Sbjct: 1 MGISNLLQFLKPIVKNTHISKYQNGIVGVDIMCWIHRGLIGCAFDVVTDNHNENYLSFIE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLA-RAIECESEGNSSASYEFY 119
+ + Y +K I +FDG LP K ++EN ++R+E A+E + + S E
Sbjct: 61 KMLEAIYQYNIKVIFVFDGEELPEK-KKENLIRKARREKAKDEALEIIKKVKNPRSNELV 119
Query: 120 QK----AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
K A+ +S I +I K++N+ YI++PYEADAQ+++L + I+EDSDL+
Sbjct: 120 IKKCIQAITVSKEIIQSVINFCKKKNIYYIISPYEADAQLSYLCRMGFISCAISEDSDLL 179
Query: 176 PFGCSRIIFKMDKFGQ 191
+GC R+++K G+
Sbjct: 180 VYGCPRVLYKFKNTGE 195
>gi|194756700|ref|XP_001960614.1| GF13444 [Drosophila ananassae]
gi|317374888|sp|B3MDA3.1|FEN1_DROAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190621912|gb|EDV37436.1| GF13444 [Drosophila ananassae]
Length = 388
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ +E
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATEA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++LK V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAEIEKFNRRLVRVTKEHAREAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + K L G + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYEKLLDGLGVNNREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINNYRDIETILDNLDTSKYTVP 271
>gi|242014497|ref|XP_002427926.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
gi|212512410|gb|EEB15188.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
Length = 380
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 151/322 (46%), Gaps = 22/322 (6%)
Query: 1 MGIQGLLPLLKSIMIPI----HIKELEGCCVAVDTYSWLHKGALSCSRELCK----GLPT 52
MGI GL LL + IK G +A+D L++ ++ E + T
Sbjct: 1 MGILGLNKLLSDVAPNAIKFSDIKNYFGRKIAIDASMTLYQFLIAVRSEGAQLTDSSGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R + G+KP+ +FDG +K + +KRA R+E + E GN+
Sbjct: 61 TSHLMGTFYRTIRMVENGIKPVYVFDGKPPELKSGELSKRAEKREEAQKALAKAEESGNT 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+F ++ V ++ E ++LK + YI AP EA+AQ L + +V A TED
Sbjct: 121 EEVDKFSRRLVKVTKDHVAECKELLKLMGIPYIEAPCEAEAQCAALVKAGKVYATATEDM 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
D + FG S II + F + + + +K L+ T+ +++CIL GCDY S+
Sbjct: 181 DALTFG-SNIILRHLTFSEARKMPVQEIYLDKVLAELEMTQNEFIDLCILLGCDYCDSIK 239
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD------- 285
G+G KRA LI K KS +K++++L VP + F +A F + V D
Sbjct: 240 GIGPKRAIELIKKHKSLEKILENLDSGKYVVPEDW--IFQEARKLFINPDVCDASNVELK 297
Query: 286 ---PKTEDIVHLSCISDNIGND 304
P TE +V C D + N+
Sbjct: 298 WNEPDTEGLVKYLC-GDKLFNE 318
>gi|156398094|ref|XP_001638024.1| predicted protein [Nematostella vectensis]
gi|317374916|sp|A7RRJ0.1|FEN1_NEMVE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156225141|gb|EDO45961.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 143/296 (48%), Gaps = 13/296 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGIQGL LL I P IKE E G +A+D Y +L S+ +
Sbjct: 1 MGIQGLAKLLGDIA-PSGIKENEIKNYFGRKIAIDASMSIYQFLIAVRSDGSQLTNEAGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR R+E + E G+
Sbjct: 60 TTSHLMGLFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERREEAQKALSKAEEAGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E Q+LK + Y+ AP EA+AQ L S +V A TED
Sbjct: 120 TENIDKFSRRLVRVTKEHNEECKQLLKLMGIPYVEAPCEAEAQCAALVKSGKVYATGTED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + F + + LS G ++ +++CIL GCDY S+
Sbjct: 180 MDALTFGTT-VMLRHLTFSEAKKMPIKEFHLQNVLSEAGLSQDEFIDLCILLGCDYCDSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
G+G KR+ LI + +S DK+++++ T PP + +A F++ V +P+
Sbjct: 239 KGIGPKRSVDLIRQHRSIDKILENI--DTSKHPPPENWLYKEARELFKNPEVRNPE 292
>gi|253741618|gb|EES98484.1| Exonuclease 1 [Giardia intestinalis ATCC 50581]
Length = 708
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 149/330 (45%), Gaps = 39/330 (11%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL ++ I + +L G +D + +LH A+ R L S +D +
Sbjct: 1 MGISGLLTAIRKAQW-IKVTQLRGSSFVIDGHCFLHAAAVLDPRSLVLENNVSGIVDVLV 59
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
++ + + L+FDGG LP K ++R ++R NLA A S G+S + +
Sbjct: 60 QLISSILPFATFVTLVFDGGALPSKSFANSRRKQTRDANLALAEVYSSAGDSEEAENALK 119
Query: 121 KAVDIS----PSIAHELIQVL-KQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
KA+ + IA+ + + L K + + ++APYEADAQ+ +L + +IT DSD++
Sbjct: 120 KAISFNSLQVSRIANGVFKRLEKHDHFAVLIAPYEADAQVAYLQKIGMADVIITNDSDIL 179
Query: 176 PFGCSRIIFKMD-KFGQGVEFQCSMLQKNKDLSF-------------------GGFTKQM 215
+G ++++K + + G L N S G T
Sbjct: 180 LYGPRKVLYKYNWRTATGFLTTIDDLYLNSFESLNAPKVPSRVVDMVDSMECSGNTTGTT 239
Query: 216 LL------EMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEE 269
L + CILSGCDY SL G+GL + + K + L+Y + P E
Sbjct: 240 LARHLRFQQACILSGCDYTPSLVGVGLITSVNTVGKTDGIVSAAQSLRYGSHKKLPGGME 299
Query: 270 SFG-------KAVLTFQHQRVYDPKTEDIV 292
SF +A LTF++ V+DP + ++V
Sbjct: 300 SFDEYVHLILQAYLTFRYHHVFDPLSFEVV 329
>gi|317374903|sp|D3TQJ5.1|FEN1_GLOMM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|289742451|gb|ADD19973.1| 5'-3' exonuclease [Glossina morsitans morsitans]
Length = 382
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 15/296 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI GL L+ I P IKE + G VA+D L++ ++ E +
Sbjct: 1 MGILGLSKLIADI-CPQAIKESDIKNYFGRKVAIDASMCLYQFLIAVRAEGAQLTNVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE-G 110
T+ H+ +R L G+KP+ +FDG K + KRA R+E+ +A+E +E G
Sbjct: 60 TTSHLMGMFYRTIRLLENGIKPVYVFDGKPPISKSGELAKRA-ERREDAQKALEKATEAG 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + +F ++ V ++ A+E ++LK V Y+ AP EA+AQ L + +V A TE
Sbjct: 119 NEADMDKFNRRLVKVTKEHANEAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG S I+ + F + + K L G T Q +++CIL GCDY
Sbjct: 179 DMDALTFG-SGILLRHLTFSEARKMPVKEFSYAKVLDGFGLTSQEFIDLCILLGCDYCDG 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
+ G+G KRA L++ +K + +++ + +VP + + + F + V DP
Sbjct: 238 IRGIGPKRATELMNSYKDIETILEKIDRKKYTVPEDWNYQIAREL--FVNPEVADP 291
>gi|195025439|ref|XP_001986060.1| GH21157 [Drosophila grimshawi]
gi|317374890|sp|B4J6M4.1|FEN1_DROGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193902060|gb|EDW00927.1| GH21157 [Drosophila grimshawi]
Length = 388
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 150/302 (49%), Gaps = 17/302 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P+ I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPLAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLAAVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG MK + KRA R++ +A++ +E
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGAPPDMKSGELAKRA-ERRDEAEKALKAATEA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ + E ++LK V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDEAQIEKFNRRLVRVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG +++ + + + + +K L T + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSCKLLRYL-TYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
S+ G+G KRA LI ++ + +++++ + +VP + ++ +A F V D T
Sbjct: 237 SIRGVGPKRAIELIKSYRDIETILENIDTNKYAVPENW--NYKRARELFIEPDVTDASTI 294
Query: 290 DI 291
D+
Sbjct: 295 DL 296
>gi|196004300|ref|XP_002112017.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
gi|317376198|sp|B3RVF0.1|FEN1_TRIAD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190585916|gb|EDV25984.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
Length = 377
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE E G VA+D +++ ++ + +
Sbjct: 1 MGIHGLAKLIAD-HAPSAIKENEIKNYFGRKVAIDASMSIYQFLIAVRSDGNVLTNEAGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + +R R+E +A E E EG+
Sbjct: 60 TTSHLMGLFYRTIRMMENGIKPVYVFDGKPPRLKSGELARRQERREEAQKQASEAEKEGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++P E ++LK V + AP EA++Q L + +V A TED
Sbjct: 120 ADNIDKFTRRTVRMTPEHCEEGKKLLKLMGVPVVQAPCEAESQCAALVKAGKVYATGTED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S ++ + F + + L F+ + +++CIL GCDY S+
Sbjct: 180 MDALTFG-SNVMLRHLTFSEARKMPIQEFHLKNALQELNFSMEQFIDLCILLGCDYCDSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
G+G KRA LI K+KS + ++K++ +VP
Sbjct: 239 KGVGPKRAVGLIEKYKSIEDIVKNISSEKFTVP 271
>gi|157169412|ref|XP_001651504.1| flap endonuclease-1 [Aedes aegypti]
gi|122094730|sp|Q178M1.1|FEN1_AEDAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|108878396|gb|EAT42621.1| AAEL005870-PA [Aedes aegypti]
Length = 380
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 15/296 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI+GL L+ + P +KE E G VA+D L++ ++ E +
Sbjct: 1 MGIKGLSQLIAD-LAPFAVKEGEIKNFFGRKVAIDASMCLYQFLIAVRAEGAQLTSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KRA R+E +A++ +E
Sbjct: 60 TTSHLMGTFYRTIRLLENGIKPVYVFDGKPPDLKSGELTKRAEKREEA-QKALDKATEAG 118
Query: 112 SSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ + F ++ V ++ ++E ++LK V Y+ AP EA+AQ L +V A TE
Sbjct: 119 VTEDIDKFNRRLVKVTKQHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKGGKVYATATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG S I+ + F + + +K L T+ +++CIL GCDY S
Sbjct: 179 DMDALTFG-SNILLRHLTFSEARKMPVQEFNYDKILQGLELTRDEFIDLCILLGCDYCDS 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
+ G+G K+A LI+K ++ +K++++L VP + ++ +A + F+ V +P
Sbjct: 238 IRGIGPKKAVELINKHRTIEKILENLDTKKYVVPENW--NYQQARVLFKEPEVANP 291
>gi|195123149|ref|XP_002006071.1| GI18754 [Drosophila mojavensis]
gi|317374891|sp|B4KNM1.1|FEN1_DROMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193911139|gb|EDW10006.1| GI18754 [Drosophila mojavensis]
Length = 388
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 17/302 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P+ I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPLAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKAGELAKRA-ERREEAEKALKVATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ ++E ++LK V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDEAEIEKFNRRLVRVTKEHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG +++ + + + + +K L T + +++CIL GCDY
Sbjct: 178 EDMDALTFGSCKLLRYL-TYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCD 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
S+ G+G KRA LI ++ + +++++ S VP + ++ +A F V D T
Sbjct: 237 SIKGIGPKRAIELIKTYRDIETILENIDTSKYIVPENW--NYQRARELFVEPEVTDASTI 294
Query: 290 DI 291
D+
Sbjct: 295 DL 296
>gi|221052892|ref|XP_002261169.1| exonuclease I [Plasmodium knowlesi strain H]
gi|194247173|emb|CAQ38357.1| exonuclease I, putative [Plasmodium knowlesi strain H]
Length = 1205
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LLP LK I HI + + V VD W+H+G +SC+ ++ ++ +
Sbjct: 1 MGINNLLPFLKPIARSTHISKYKNEVVGVDIMCWIHRGLVSCAYDVIMDNYNDSYLSFIE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQ---ENKRARSRKENLARAIECESEGNSSASYE 117
+ + + +K I +FDG LP K + N+R K+ I+ + S +
Sbjct: 61 KMLECIYEHNIKVIFVFDGEELPEKRAENVIRNERREKAKKEAQEIIKSVKDPRSDVTVR 120
Query: 118 FY-QKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
+A+ +S I ++ K +N+ YI++P+EADAQ+++L + VI+EDSDL+
Sbjct: 121 RKCTQALSVSKEIIRTVMNFCKTKNIDYIISPFEADAQLSYLCRMGYISCVISEDSDLLV 180
Query: 177 FGCSRIIFKMDKFGQGVEFQCSM 199
+GC R+++K+ G+ E C M
Sbjct: 181 YGCPRVLYKLKNTGECDEI-CLM 202
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 13/87 (14%)
Query: 211 FTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKV----IKHLKYSTVSVP 264
F+ M L MCILSGCDY + GMG+K A +L SK+K+ +++ I H K+ +P
Sbjct: 296 FSIDMFLAMCILSGCDYTSDFHITGMGIKTAFSLTSKYKTIEQIFSFLISHQKWKR-KIP 354
Query: 265 PFYE------ESFGKAVLTFQHQRVYD 285
P + + F H +VYD
Sbjct: 355 PTLNTLEKMLNKYEEIKNAFFHHQVYD 381
>gi|124512040|ref|XP_001349153.1| exonuclease I, putative [Plasmodium falciparum 3D7]
gi|23498921|emb|CAD50999.1| exonuclease I, putative [Plasmodium falciparum 3D7]
Length = 1347
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 6/200 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI LL LK I+ HI + + V VD W+H+G +SC+ ++ ++++
Sbjct: 1 MGISNLLQFLKPIIKNSHISKYKNEVVGVDIMCWIHRGLISCAYDIVTDQYNDSYLNFIE 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI-ECESEGNSSASYEFY 119
+ + ++ +K + +FDG LP K ++EN ++R+E + E S+ + + E
Sbjct: 61 KMLVPIYNHNIKVVFVFDGEELPEK-KKENMIRKNRREKAKMELQEIISKVKNPRTNEMV 119
Query: 120 QK----AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
K A+ +S I + + +++N+ YI++PYEADAQ+++L + I+EDSDL+
Sbjct: 120 LKKCIQAISVSKEIIDSVKEFCRKKNIDYIISPYEADAQLSYLCRMGFISCAISEDSDLL 179
Query: 176 PFGCSRIIFKMDKFGQGVEF 195
+GC R+++K+ G+ E
Sbjct: 180 VYGCPRVLYKLKNTGECNEI 199
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 211 FTKQMLLEMCILSGCDYLQS--LPGMGLKRAHALISKFKSYDKVIKHLKYST--VSVPPF 266
F M L MC+LSGCDY + GMG+K A+ LI + K+ + + L + + P
Sbjct: 333 FNIDMFLTMCVLSGCDYSNDFHITGMGIKTAYNLIFQHKNIENIFHFLISNDRWRNKIPE 392
Query: 267 YEESFGKAVLTFQ-------HQRVYD 285
+F K + TFQ + +VYD
Sbjct: 393 NLNTFDKLMNTFQKIKNAFLNHQVYD 418
>gi|428672546|gb|EKX73459.1| flap endonuclease-1, putative [Babesia equi]
Length = 746
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 142/281 (50%), Gaps = 25/281 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-----LEGCCVAVDTYSWLHKGALSCSRELC-------- 47
MGI+GL+ L S P IKE L G +A+D + L++ A++ R+
Sbjct: 1 MGIKGLIGFL-SETAPSSIKEVPLESLSGETIAIDASAALYQFAIAI-RDTSYLSTLVNS 58
Query: 48 KGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
KG TS HI M+R + G+KPI +FD +K++ +KR R+E A +
Sbjct: 59 KGESTS-HISGLMNRCVRILEAGIKPIFVFDSTPPDLKLDTLSKRKERREEAEASLEAAK 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G+S + + V +S + Q+L+ + + A EA+AQ L AV
Sbjct: 118 EAGDSETIKKLVGRTVKVSKEQNNSAKQLLRLMGIPVVEAKEEAEAQCAQLVQEGIATAV 177
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
+EDSD + FGC RI+ + + G+ V + + K LS GFT+ + CIL GCDY
Sbjct: 178 ASEDSDSLVFGC-RILLR-NLSGKKV----LRIDQEKVLSLLGFTRAQFTDFCILCGCDY 231
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
++ G+G K A++LI K+KS +++ LK+ ++P F E
Sbjct: 232 CGTIKGIGPKNAYSLIKKYKSIEEI---LKFKGETLPGFEE 269
>gi|195431204|ref|XP_002063637.1| GK21315 [Drosophila willistoni]
gi|317374897|sp|B4MR84.1|FEN1_DROWI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194159722|gb|EDW74623.1| GK21315 [Drosophila willistoni]
Length = 388
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ +E
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATEA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++LK V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDEAEIEKFNRRLVRVTKEHAREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG S+++ + + + + K L ++ +++CIL GCDY +
Sbjct: 178 EDMDALTFGSSKLL-RYLTYSEARKMPVKEFTYEKLLQGLELNQREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINSYRDIETILDNLDTSKYTVP 271
>gi|308160669|gb|EFO63144.1| Exonuclease 1 [Giardia lamblia P15]
Length = 702
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 164/381 (43%), Gaps = 51/381 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GLL ++ + + +L G +D + +LH A + L S +D +
Sbjct: 1 MGISGLLTAIRKAQW-VKVTQLRGSSFVIDGHCFLHAAATLDPKALVLENNISGVVDVMV 59
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
V + L+FDGG LP K ++R ++R +LA A S G+S + +
Sbjct: 60 QLVGSILSSATFVTLVFDGGSLPSKTFTNSRRKQARDASLALAEAYSSAGDSEEAENALK 119
Query: 121 KAVDIS----PSIAHELIQVL-KQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
+A+ S IA+ + + L K N + ++APYEADAQ+ +L + ++T DSD++
Sbjct: 120 RAISFSNLQVSRIANGVFKRLEKHDNFAVLIAPYEADAQVAYLQKIGMGDVIVTNDSDIL 179
Query: 176 PFGCSRIIFKMD-KFGQG--------------------VEFQCSMLQKNKDLSFGGFTKQ 214
+G + ++K + + G G V + + L N S G T
Sbjct: 180 LYGPRKALYKYNWRTGTGFLSTIDDLYLNNFESLNTPKVSSRVATLVDNTK-SNGTSTGA 238
Query: 215 MLL------EMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
L + CILSGCDY SL G+GL + + K + L+Y P
Sbjct: 239 TLARHLRFQQACILSGCDYTPSLVGVGLITSVNTVGKTDGIVSAAQSLRYGHHKKLPGDV 298
Query: 269 ESFG-------KAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFT 321
ESF +A LTF++ V+DP + ++V ++ + FL + PF
Sbjct: 299 ESFDEYVHLILQAYLTFRYHHVFDPLSFEVVPFHPFNEEDRQLIKFLNQWCYGAPFTPFE 358
Query: 322 Q----------LPFQEVSDNS 332
LPF + +D+S
Sbjct: 359 ACLACTGILHPLPFTQSTDSS 379
>gi|307111520|gb|EFN59754.1| hypothetical protein CHLNCDRAFT_13604, partial [Chlorella
variabilis]
Length = 150
Score = 109 bits (273), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 45/191 (23%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL +LK +P H++EL G V VD +SWLH+GA+ +REL G
Sbjct: 1 MGIDGLHGVLKPYCLPSHVRELAGHRVGVDAWSWLHRGAVGAARELATG----------- 49
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+R + R + +G + +
Sbjct: 50 ------------------------------ERPWEERGKTIRLPALDVQGREQEAQGVFM 79
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE----AVITEDSDLIP 176
+ VD++ +AHE+ L+++ V ++VAPYEAD Q+ +L+ + E AVITEDSDL+
Sbjct: 80 QCVDVTADMAHEVAARLRERGVEFVVAPYEADPQLAYLSSIPEREGGIAAVITEDSDLVA 139
Query: 177 FGCSRIIFKMD 187
+GC R++FKMD
Sbjct: 140 YGCRRVLFKMD 150
>gi|195335051|ref|XP_002034189.1| GM20026 [Drosophila sechellia]
gi|317374894|sp|B4HTA1.1|FEN1_DROSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194126159|gb|EDW48202.1| GM20026 [Drosophila sechellia]
Length = 385
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++L V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + +K L + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINTYRDIETILDNLDSSKYTVP 271
>gi|398015714|ref|XP_003861046.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499270|emb|CBZ34343.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1015
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 77/274 (28%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHK----------------------- 37
MGI+GL L+ + H+ + G VAVD Y WLH+
Sbjct: 1 MGIKGLWQALREYVDDGHLSQFRGQRVAVDMYVWLHRCIHRSVRIRTESVVAFFDAKYSD 60
Query: 38 --------------GALSCSRELCKGLPTS-------RHIDYCMHRVNLLRHYGVKPILI 76
A++C+ L + + + + +V+ L+ +GV P+ +
Sbjct: 61 TPSSTEPDSLDGGGDAVACTSPSPAALALDDVLVIDDQFVTHVVDKVSALQRFGVIPVCV 120
Query: 77 FDGGLLPMKIEQENKRARSRKENLARAI------ECES--------EGNSSAS------- 115
FDG +PMK + +R R R E A+ C++ EG+++ +
Sbjct: 121 FDGAAMPMKGSTDEERQRRRVEAFQGALIKLERLYCDACRRRGYTAEGHATGTRITLPRD 180
Query: 116 ---YE----FYQKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAV 167
YE +KAVDIS +AH +IQVLK++ +V IVAPYEADAQ+ +L V A
Sbjct: 181 SRPYEEAVQLLEKAVDISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCREGYVSAA 240
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
+EDSDLI + C +I K+D F +C +LQ
Sbjct: 241 ASEDSDLIAYYCPCVISKLDTFSG----KCEVLQ 270
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 210 GFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP---- 265
FT + L CILSGCDY+ +L +G+K+A L++ S + L+ P
Sbjct: 365 AFTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLERE-FGFPADELR 423
Query: 266 FYEESFGKAVLTFQHQRVYDPKTEDIV 292
Y +A F H VY P T++IV
Sbjct: 424 RYRHRILEAFYCFAHHLVYSPLTQEIV 450
>gi|195584050|ref|XP_002081828.1| GD25512 [Drosophila simulans]
gi|317374895|sp|B4QIG6.1|FEN1_DROSI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194193837|gb|EDX07413.1| GD25512 [Drosophila simulans]
Length = 385
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++L V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + +K L + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINTYRDIETILDNLDSSKYTVP 271
>gi|17647423|ref|NP_523765.1| flap endonuclease 1 [Drosophila melanogaster]
gi|122102839|sp|Q7K7A9.1|FEN1_DROME RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3929699|emb|CAA21320.1| EG:EG0003.3 [Drosophila melanogaster]
gi|7302871|gb|AAF57944.1| flap endonuclease 1 [Drosophila melanogaster]
gi|261260009|gb|ACX54939.1| MIP14376p [Drosophila melanogaster]
Length = 385
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++L V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + +K L + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINTYRDIETILDNLDSSKYTVP 271
>gi|146087446|ref|XP_001465826.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134069926|emb|CAM68255.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1015
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 77/274 (28%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHK----------------------- 37
MGI+GL L+ + H+ + G VAVD Y WLH+
Sbjct: 1 MGIKGLWQALREYVDDGHLSQFRGQRVAVDMYVWLHRCIHRSVRIRTESVVAFFDAKYSD 60
Query: 38 --------------GALSCSRELCKGLPTS-------RHIDYCMHRVNLLRHYGVKPILI 76
A++C+ L + + + + +V+ L+ +GV P+ +
Sbjct: 61 TPSSTEPDSLDGGGDAVACTSPSPAALALDDVLVIDDQFVTHVVDKVSALQRFGVIPVCV 120
Query: 77 FDGGLLPMKIEQENKRARSRKENLARAI------ECES--------EGNSSAS------- 115
FDG +PMK + +R R R E A+ C++ EG+++ +
Sbjct: 121 FDGAAMPMKGSTDEERQRRRVEAFQGALIKLERLYCDACRRRGYTAEGHATGTRITLPRD 180
Query: 116 ---YE----FYQKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAV 167
YE +KAVDIS +AH +IQVLK++ +V IVAPYEADAQ+ +L V A
Sbjct: 181 SRPYEEAVQLLEKAVDISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCREGYVSAA 240
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
+EDSDLI + C +I K+D F +C +LQ
Sbjct: 241 ASEDSDLIAYYCPCVISKLDTFSG----KCEVLQ 270
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 210 GFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP---- 265
FT + L CILSGCDY+ +L +G+K+A L++ S + L+ P
Sbjct: 365 AFTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLERE-FGFPADELR 423
Query: 266 FYEESFGKAVLTFQHQRVYDPKTEDIV 292
Y +A F H VY P T++IV
Sbjct: 424 RYRHRILEAFYCFAHHLVYSPLTQEIV 450
>gi|195488056|ref|XP_002092153.1| GE14031 [Drosophila yakuba]
gi|317374898|sp|B4P5U9.1|FEN1_DROYA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194178254|gb|EDW91865.1| GE14031 [Drosophila yakuba]
Length = 387
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A+E ++L V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHANEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + K L + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYEKLLEGLSINSREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINNYRDIETILDNLDSSKYTVP 271
>gi|195382111|ref|XP_002049775.1| GJ21778 [Drosophila virilis]
gi|317374896|sp|B4LM90.1|FEN1_DROVI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194144572|gb|EDW60968.1| GJ21778 [Drosophila virilis]
Length = 386
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ +E
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGQPPDLKSGELAKRA-ERREEAEKALKAATEA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A + F ++ V ++ + E ++LK V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDEAEIDKFNRRLVRVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG +++ + + + + +K L T + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSCKLLRYL-TYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI ++ + +++++ S VP
Sbjct: 237 SIKGVGPKRAIELIKSYRDIETILENIDTSKYPVP 271
>gi|194882401|ref|XP_001975300.1| GG22240 [Drosophila erecta]
gi|317374889|sp|B3NP61.1|FEN1_DROER RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190658487|gb|EDV55700.1| GG22240 [Drosophila erecta]
Length = 387
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++L V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + +K L + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYDKLLEGLSINSREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINNYRDIETILDNLDSSKYTVP 271
>gi|198477405|ref|XP_002136633.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
gi|317374893|sp|B5DUR8.1|FEN1_DROPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|198142925|gb|EDY71637.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
Length = 386
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++L V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAEIEKFNRRLVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + +K L + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINNYRDIETILDNLDTSKYTVP 271
>gi|321473340|gb|EFX84308.1| hypothetical protein DAPPUDRAFT_47502 [Daphnia pulex]
Length = 374
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 21/304 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL----HKGALSCSRELC 47
MGI+GL ++ P IKE E G VA+D Y +L +GA+ S +
Sbjct: 1 MGIKGLTQVIGDTA-PTAIKENEIKNYFGRKVAIDASMSIYQFLIAVRSEGAMLTSADG- 58
Query: 48 KGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
T+ H+ +R + G+KP+ +FDG MK + KRA R+E + +
Sbjct: 59 ---ETTSHLMGIFYRTIRMVDNGIKPVYVFDGKPPDMKGGELTKRAEKREEASKQLVLAT 115
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G++ + ++ V ++ E Q+L + Y+ AP EA+AQ L + +V A
Sbjct: 116 DAGDAVEMEKMNKRLVKVNKGHTDECKQLLTLMGIPYVEAPCEAEAQCAALVKAGKVYAT 175
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + FG S ++ + + + + +K L +T +++CI+ GCDY
Sbjct: 176 ATEDMDSLTFG-SNVLLRYLTYSEAKKMPIKEFHLDKILDGLSYTMDEFIDLCIMLGCDY 234
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
++ G+G KRA LI K + +KVI++L +VP + + +A F+ V D +
Sbjct: 235 CDTIKGIGAKRAKELIDKHRCIEKVIENLDTKKYTVPENW--PYQEARRLFKTPDVADAE 292
Query: 288 TEDI 291
T D+
Sbjct: 293 TLDL 296
>gi|195155221|ref|XP_002018504.1| GL16728 [Drosophila persimilis]
gi|317374892|sp|B4GIM3.1|FEN1_DROPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194114300|gb|EDW36343.1| GL16728 [Drosophila persimilis]
Length = 386
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI GL L+ + P I+E E G VA+D L++ ++ E G
Sbjct: 1 MGILGLSKLIAD-LAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGD 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
PTS H+ +R L G+KP+ +FDG +K + KRA R+E +A++ ++
Sbjct: 60 PTS-HLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRA-ERREEAEKALKAATDA 117
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
A E F ++ V ++ A E ++L V Y+ AP EA+AQ L + +V A T
Sbjct: 118 GDDAEIEKFNRRLVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG ++++ + + + + +K L + +++CIL GCDY +
Sbjct: 178 EDMDALTFGSTKLLRYL-TYSEARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI+ ++ + ++ +L S +VP
Sbjct: 237 SIKGIGPKRAIELINNYRDIETILDNLDTSKYTVP 271
>gi|312137188|ref|YP_004004525.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
gi|311224907|gb|ADP77763.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
Length = 327
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 12/247 (4%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
+ +K+LEG +A+D +W+++ LS R+ KG TS H+ +HR + L
Sbjct: 14 LELKDLEGLTIAIDASNWIYQ-FLSSIRQRDGTPLMDRKGRVTS-HLVGILHRTSALVEN 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
+KP+ +FDG L +K E ++R R R E R E + + + ++ +A IS I
Sbjct: 72 NIKPVYVFDGKSLALKSETISERTRMRLEAEKRWKEALKKKDLEKARKYASRASRISKEI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++L + YI AP E +AQ +L + AV ++D D + FG R+I +
Sbjct: 132 IESSKELLDAMGIPYIQAPNEGEAQAVYLVKNGDAWAVASQDYDCLLFGAPRVIRNL--- 188
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSY 249
+ +L+ +K L G +++ L+++ +L G D+ + G+G KR LI KF
Sbjct: 189 AISSDINLELLELDKILKKLGISREQLIDIALLVGTDFNPGVKGIGAKRGLELIKKFGDI 248
Query: 250 DKVIKHL 256
VIK +
Sbjct: 249 YTVIKRM 255
>gi|291239422|ref|XP_002739622.1| PREDICTED: flap structure-specific endonuclease 1-like
[Saccoglossus kowalevskii]
Length = 379
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI L L+ P +KE E G VA+D +++ ++ ++ +
Sbjct: 1 MGIHQLAKLIADCA-PSSVKENEMKNYFGRKVAIDASMSIYQFLIAVRQDGNVLTNEDGD 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG +K + +KRA R+E + E EG
Sbjct: 60 TTSHLMGMFYRTIRMVDHGIKPLYVFDGKPPDLKSGELSKRAEKREEAEKALAKAEEEGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ ++ V ++ E ++L + Y+ AP EA+AQ L + +V A TED
Sbjct: 120 TENVNKYQRRLVKVTKEHNEECKKLLTFMGIPYLDAPGEAEAQCAELVKAGKVYATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S ++ M F + + C N L+ ++ +++CIL GCDY S+
Sbjct: 180 MDSLTFGSSTVVRHM-TFSEARKMPCQEYNLNNILAELELSQDEFIDLCILLGCDYCDSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
G+G KRA LI + K+ ++VI HL +VP +
Sbjct: 239 RGIGPKRAIDLIRQHKTIEEVIAHLDSKKYTVPDGW 274
>gi|453084814|gb|EMF12858.1| flap endonuclease [Mycosphaerella populorum SO2202]
Length = 393
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L +++ P +KE E G VA+D YS+L + +
Sbjct: 1 MGIKSLYQVIRE-NCPDAVKEGEIKTQFGRKVAIDASMSLYSFLIAVRSGGEQLMSDTGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E + E + G
Sbjct: 60 TTSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQEQHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++LK V YIVAP EA+AQ LA + +V A +ED
Sbjct: 120 AEEVERFSRRTVRVTKEHNAEAQRLLKLMGVPYIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F ++ + F + + + ++ L F ++MCIL GCDYL +
Sbjct: 180 MDTLTFNAP-VLLRHLTFSEQRKEPIQEIHLDRVLEGLDFDLNQFIDMCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL----KYSTVSVPPFYEESFGKAVLTFQHQRV 283
G+G K AHALI + K+ +KV++H+ KY+ P+ E A L FQ V
Sbjct: 239 KGIGPKNAHALIKEHKTLEKVVEHIEKTGKYTLPEDWPYQE-----ARLLFQEPDV 289
>gi|320202935|ref|NP_001188509.1| flap endonuclease-1 [Bombyx mori]
gi|268044461|gb|ACY92094.1| flap endonuclease-1 [Bombyx mori]
Length = 380
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 143/296 (48%), Gaps = 13/296 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI GL L+ I P +KE+E G +A+D L++ ++ E + +
Sbjct: 1 MGILGLSKLIADIA-PYAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG MK Q NKRA R+E + G+
Sbjct: 60 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNKRAERREEAEKELQKATEAGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+++ +F ++ V ++ + E Q+LK V + AP EA+AQ L S +V A TED
Sbjct: 120 TASVDKFNRRLVKVTKQRSEEAKQLLKLMGVPVVDAPCEAEAQCAALVKSGKVFAAATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG ++ + F + + N L + +++CIL GCDY S+
Sbjct: 180 MDALTFGAP-VLLRHLTFSEARKMPVQEFHLNNVLQGLELKQNEFIDLCILLGCDYCGSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
G+G KRA LI + ++ D+V+K++ P ++ + +A F V DPK
Sbjct: 239 RGVGPKRAIDLIRQHRTLDEVLKNIDTEKYQPPTDWD--YERARSLFMEPEVADPK 292
>gi|323447867|gb|EGB03774.1| hypothetical protein AURANDRAFT_67724 [Aureococcus anophagefferens]
Length = 200
Score = 106 bits (265), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 71/121 (58%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP+ + +H+ VA+D Y+WLH+G +C+ EL G + +HI++CM
Sbjct: 1 MGVSGLLPMFRGSTQTVHVSRYTHEVVAIDGYAWLHRGVHACASELGAGGASDKHIEFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV LL HY VKP+L+FDGG LP K QE R R+ A A + E + + ++Y
Sbjct: 61 GRVALLLHYKVKPLLVFDGGALPAKAAQEASRRGKREHAKAMASQKAREDSQEEARKWYA 120
Query: 121 K 121
K
Sbjct: 121 K 121
Score = 40.0 bits (92), Expect = 3.6, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 211 FTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYS 259
+T+ M + MC L+GCDY+ +K A L++++K KV++ LK+S
Sbjct: 150 WTQHMFVTMCALAGCDYVDV---EAVKNARRLVARYKDRMKVLRALKWS 195
>gi|391334775|ref|XP_003741776.1| PREDICTED: flap endonuclease 1-like [Metaseiulus occidentalis]
Length = 379
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 147/316 (46%), Gaps = 25/316 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSREL-----CKGL 50
MGI GL L+ + P IKE E G +A+D L++ ++ +E G
Sbjct: 1 MGIHGLSKLIADVA-PGAIKEGEIKNFFGRKIALDASMCLYQFLIAVRQENNMLTNADGE 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
TS + + + ++ + G+KP+ +FDG MK + KRA R+E + G
Sbjct: 60 TTSHLVGFFYRTIRMIEN-GIKPLYVFDGKPPDMKSGELEKRAERREEAQKELDKATEVG 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N +F ++ V +S + ++L V ++VAP EA+AQ L +++V A TE
Sbjct: 119 NQEDINKFQRRLVKVSKQHNADAQRLLALMGVPFLVAPCEAEAQCAELVKAQKVYAAATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG S ++ M F + + K L+ FT++ +++CIL GCDY +
Sbjct: 179 DMDCLTFGASVLLRHMT-FSEARKMPIKEFNLPKILAELNFTQREFIDLCILLGCDYCGT 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV------- 283
+ G+G KRA L+ + + V+K++ T PP + F +A F+ V
Sbjct: 238 IKGIGPKRAIELMRSHRCIENVLKNI--DTKKYPPPEDWQFERARELFEKPDVTPGSELD 295
Query: 284 ---YDPKTEDIVHLSC 296
+P E +V C
Sbjct: 296 FKWTEPDEEGLVKFLC 311
>gi|323447590|gb|EGB03505.1| hypothetical protein AURANDRAFT_67936 [Aureococcus anophagefferens]
Length = 193
Score = 106 bits (264), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 71/121 (58%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GLLP+ + +H+ VA+D Y+WLH+G +C+ EL G + +HI++CM
Sbjct: 1 MGVSGLLPMFRGSTQTVHVSRYTHEVVAIDGYAWLHRGVHACASELGAGGASDKHIEFCM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
RV LL HY VKP+L+FDGG LP K QE R R+ A A + E + + ++Y
Sbjct: 61 GRVALLLHYKVKPLLVFDGGALPAKAAQEASRRGKREHAKAMASQKAREDSQEEARKWYA 120
Query: 121 K 121
K
Sbjct: 121 K 121
>gi|387916082|gb|AFK11650.1| Flap endonuclease 1-B [Callorhinchus milii]
Length = 382
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL----HKGALSCSRELC 47
MGIQGL L+ I P I+E E G +A+D Y +L H G + +
Sbjct: 1 MGIQGLAKLIADIA-PGAIREQELKNYFGRKIAIDASMSIYQFLIAVRHDGQVLQT---- 55
Query: 48 KGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
+ T+ H+ +R + G+KP+ +FDG MK + KR R E + + +
Sbjct: 56 ESGETTSHLMGMFYRTIRMVESGIKPVYVFDGKPPDMKSGELAKRNERRSEAEKQLAQAQ 115
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G+S F ++ V ++ E +L + Y+ AP EA+A L S +V
Sbjct: 116 EAGDSENVERFNKRLVKVTKQHNEECKTLLTLMGIPYLEAPCEAEASCAALVKSGKVYGT 175
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + FG + ++ +M + + NK L G +++ +++CIL GCDY
Sbjct: 176 ATEDMDGLAFGTTILLRRMTA-SEAKKLPIQEFHLNKILQETGLSQEEFIDLCILLGCDY 234
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVL 276
+++ G+G KRA LI + + ++V+KH+ + +VP + S +++
Sbjct: 235 CETIRGIGPKRAIELIRQHRCIEEVLKHIDGNKYTVPGDWAYSQARSLF 283
>gi|226478114|emb|CAX72750.1| Flap endonuclease 1 [Schistosoma japonicum]
Length = 389
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 9/273 (3%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSREL-----CKGLPTSRHIDYCMHRVNLLRHYGVKP 73
IK G VA+D +++ ++ +E +G TS H+ +R + G+KP
Sbjct: 23 IKSYFGRKVAIDASMSIYQFLIAVRQEGNTLMNAEGESTS-HLMGMFYRTIRMIESGIKP 81
Query: 74 ILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHEL 133
+ +F+G MK + KRA R E+ + E+E + A +F ++ V ++P+ +
Sbjct: 82 VYVFEGKPPSMKAGELAKRADRRIESTKELAKAEAEEDLEAIEKFSKRLVKVTPAHNEDC 141
Query: 134 IQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGV 193
Q+L+ V ++ AP EA+AQ LA S +V AV TED D + FG + ++ + F +
Sbjct: 142 KQLLRLMGVPFVNAPGEAEAQCAALAKSGKVYAVGTEDMDALAFG-TPVLLRHLTFSEAR 200
Query: 194 EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVI 253
+ L T +++CIL GCDY+ ++ G+G K+A L+ K+ S D V+
Sbjct: 201 KMAIQEFNLASVLEGLSLTMDQFVDLCILLGCDYVDTIRGIGPKKALDLLHKYHSIDCVL 260
Query: 254 KHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
K++ S VP + K + F + V DP
Sbjct: 261 KNIDKSKYPVPNDWPYEDAKKL--FLNPEVTDP 291
>gi|413932541|gb|AFW67092.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 411
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 145/290 (50%), Gaps = 33/290 (11%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDT----YSWL----HKGALSCSRELCK 48
MGI+GL LL + + +++ G +AVD Y +L KG+ + E
Sbjct: 1 MGIKGLTKLLAQHAPTAAVQRRVEDYRGRVIAVDASVSIYQFLAVVGRKGSELLTNE--A 58
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLARAIE 105
G TS H+ ++R + G+KP+ +FDG MK ++ KR+ R + +L RA+E
Sbjct: 59 GEITS-HLQGMLNRTIRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDAIKDLNRAME 117
Query: 106 CESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE 165
G+ +A +F ++ V ++ + ++L+ V + AP EA+AQ L + QV
Sbjct: 118 I---GDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVY 174
Query: 166 AVITEDSDLIPFGCSRIIFKMDKFGQG----VEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
AV +ED D + FG R + + G EF S K L G T +++CI
Sbjct: 175 AVASEDMDTLTFGARRFLRHLTDLGYKKSPVTEFDVS-----KVLEELGLTMDQFIDLCI 229
Query: 222 LSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
LSGCDY +++ G+G +RA LI + ++V+++L + SVP P+ E
Sbjct: 230 LSGCDYCENIRGIGGQRALKLIRQHGCIEEVLQNLNQTRFSVPEDWPYQE 279
>gi|320165003|gb|EFW41902.1| flap endonuclease 1-B [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 3/232 (1%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG MK + KR R+E A G
Sbjct: 60 TTSHLVGFFYRTIRMLENGIKPVYVFDGKPPVMKSGELAKRTARREEAQASLDAATEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
S +F ++ V ++ E ++L V YI AP EA+AQ L S V A TED
Sbjct: 120 SETMEKFQRRLVKVTKEHNEECKRLLTLMGVPYISAPCEAEAQCAALVKSGSVFAAGTED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S+++ + F + + ++ L T + +++CIL GCDY +S+
Sbjct: 180 MDALTFG-SKVLLRHLTFSEARKMPIKEFNLDRALEGLKLTMEQFVDLCILLGCDYCESI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV 283
G+G RA+ALI ++K+ +++IK+L +P + +F +A F V
Sbjct: 239 KGIGPTRAYALIQEYKTIEEIIKNLDTEKYPLPANW--AFAEARTLFLEPEV 288
>gi|340503093|gb|EGR29715.1| hypothetical protein IMG5_150060 [Ichthyophthirius multifiliis]
Length = 138
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPI-LIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
PT +HI++C+ R+ + +G+K I L+FDG LP K + E R +R+E A++ E
Sbjct: 4 PTKKHIEFCIKRIEDILSFGIKKIVLVFDGHKLPSKEQTEQIRKTNREEARQEALKLMEE 63
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLK-QQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +++ + +VD++ +A++LI+V + +Q+V IV+P+EADAQ+ +L+ + V+ V+
Sbjct: 64 GKKEQAFKKFASSVDVTAQMAYDLIKVFEGRQDVECIVSPFEADAQLAYLSKTNYVDLVV 123
Query: 169 TEDSDLIPFGCSRI 182
+EDSDL+ FG S+
Sbjct: 124 SEDSDLLAFGYSKF 137
>gi|195579938|ref|XP_002079813.1| GD21819 [Drosophila simulans]
gi|194191822|gb|EDX05398.1| GD21819 [Drosophila simulans]
Length = 119
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MGI GL+P + +H+K++ G VAVDTY WLHKG C+ +L +G T +I YC+
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE 105
VN+L Y +KPIL+FDG LP K E +R SRK++ RA E
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAE 105
>gi|157869844|ref|XP_001683473.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126538|emb|CAJ04855.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1013
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 123/274 (44%), Gaps = 77/274 (28%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHK----------------------- 37
MGI+GL L+ + H+ + G VAVD Y WLH+
Sbjct: 1 MGIKGLWQALREYVDDGHLSQFRGQRVAVDMYVWLHRCIHRSVRIRTESVVAFFDAKYSG 60
Query: 38 --------------GALSCSRELCKGLPTS-------RHIDYCMHRVNLLRHYGVKPILI 76
A++C+ L + + + +V+ L+ +GV P+ +
Sbjct: 61 TLNNTEPDSLDGGGDAVACASPSPAPLSLDDVLVIDDQFLTLVVDKVSALQRFGVIPVCV 120
Query: 77 FDGGLLPMKIEQENKRARSRKENLARAI------ECES--------EGNSSAS------- 115
FDG +PMK + +R R R E A+ C++ EG+++ +
Sbjct: 121 FDGAAMPMKGGTDEERQRRRVEAFQGALIKLERLYCDARRRRGYTAEGHATGTRITLPRD 180
Query: 116 ---YE----FYQKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAV 167
YE +KAVDIS +AH +IQVLK++ +V IVAPYEADAQ+ +L V A
Sbjct: 181 SRPYEEAVQLLEKAVDISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCREGYVAAA 240
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
+EDSDLI + C +I K+D F +C +LQ
Sbjct: 241 ASEDSDLIAYYCPCVISKLDTFSG----KCEVLQ 270
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 211 FTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP----F 266
FT + L CILSGCDY+ +L +G+K+A L++ S + L+ P
Sbjct: 366 FTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLERE-FGFPADELRR 424
Query: 267 YEESFGKAVLTFQHQRVYDPKTEDIV 292
Y +A F H VY P T++IV
Sbjct: 425 YRHRILEAFYCFAHHLVYSPLTQEIV 450
>gi|330797354|ref|XP_003286726.1| hypothetical protein DICPUDRAFT_31355 [Dictyostelium purpureum]
gi|325083324|gb|EGC36780.1| hypothetical protein DICPUDRAFT_31355 [Dictyostelium purpureum]
Length = 383
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 134/281 (47%), Gaps = 20/281 (7%)
Query: 1 MGIQGLLPLLK-----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+ L L++ SI + +K G +A+D + L++ ++ + ++ L
Sbjct: 1 MGIKKLTDLIEDNAPTSIKTNL-LKNYFGRIIAIDASTSLYQFLIAMNADVSSALTNQLG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R L G+KPI +FDG +K + KR RKE E G
Sbjct: 60 ETTSHLQGMFYRTIKLISKGIKPIYVFDGKPPTLKSGELAKRQAKRKEATDSLKEATEVG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
S +F ++ + +S E I++L V + AP EA+AQ + S + A +E
Sbjct: 120 TSEDVQKFAKRTISVSRKQNEECIKLLTLMGVPVVKAPCEAEAQCAEIVKSGKAWATGSE 179
Query: 171 DSDLIPFGCS----RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + G + R+ F K +EF+ + L G T + +++ IL GCD
Sbjct: 180 DMDSLTLGSTVLLRRLFFSEAKKMPILEFELPSV-----LEGLGLTYEEFIDLGILLGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
Y S+ G+G KRA LI K K+ +++IKHL S +P F+
Sbjct: 235 YCDSIKGIGPKRAFELIQKHKTLEEIIKHLDKSKYPIPEFF 275
>gi|401422563|ref|XP_003875769.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492008|emb|CBZ27282.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1013
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 122/274 (44%), Gaps = 77/274 (28%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHK---------------------GA 39
MGI+GL L+ + H+ + G +AVD Y WLH+
Sbjct: 1 MGIKGLWQALREYVDDGHLSQFRGQRMAVDMYVWLHRCIHRSVRIRTESVVAFFDAKYSG 60
Query: 40 LSCSRE----------LCKGLPT-------------SRHIDYCMHRVNLLRHYGVKPILI 76
C E + + P+ + + + +V L+ +GV PI +
Sbjct: 61 TPCGTEPNSLDSGGDAVARASPSPASLSLDDVLVIDDQFVALVVDKVAALQRFGVIPICV 120
Query: 77 FDGGLLPMKIEQENKRARSRKENLARAI------ECES--------EGNSSAS------- 115
FDG +PMK + +R R R E A+ C++ EG+++ S
Sbjct: 121 FDGAGMPMKGGTDEERQRRRVEAFQGALIKLERLYCDARRHRGYTVEGHTAGSRITLPRD 180
Query: 116 ---YE----FYQKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAV 167
YE +KAVDIS +AH +IQVL+++ +V IVAPYEADAQ+ +L V A
Sbjct: 181 SRHYEEAVQLLEKAVDISTELAHAVIQVLREERHVECIVAPYEADAQLAYLCREGYVAAA 240
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
+EDSDLI + C +I K+D F +C +LQ
Sbjct: 241 ASEDSDLIAYYCPCVISKLDTFSG----KCEVLQ 270
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 210 GFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP---- 265
GFT + L CILSGCDY+ +L +G+K+A LI+ S + L+ P
Sbjct: 365 GFTYESFLLGCILSGCDYVPNLRSIGVKKAFKLIAHATSLRQCFTTLERE-FGFPADELR 423
Query: 266 FYEESFGKAVLTFQHQRVYDPKTEDIV 292
Y +A F H VY P T++IV
Sbjct: 424 RYRHRILEAFYCFAHHLVYSPLTQEIV 450
>gi|91085979|ref|XP_971921.1| PREDICTED: similar to flap endonuclease-1 [Tribolium castaneum]
gi|270009935|gb|EFA06383.1| hypothetical protein TcasGA2_TC009261 [Tribolium castaneum]
Length = 381
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 151/316 (47%), Gaps = 25/316 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK----GLP 51
MGI GL LL + P I+E E G VA+D L++ ++ E +
Sbjct: 1 MGILGLSKLLADVA-PHAIREGEIKHYFGRKVAIDASMCLYQFLIAVRNESGQLTSVDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE-G 110
T+ H+ +R L G+KP+ +FDG +K + +KR + R++ +A++ +E G
Sbjct: 60 TTSHLLGTFYRTIRLIENGIKPVYVFDGKPPELKSAELSKR-QERRDEAQKALDKATELG 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+++ +F ++ V ++ A E Q+L V YI AP EA+AQ + V A TE
Sbjct: 119 DATEVDKFNRRLVKVTRHHADEAKQLLTLMGVPYIEAPCEAEAQCAAMVKGGLVYATATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG S ++ + F + + + +K L ++ +++CIL GCDY +S
Sbjct: 179 DMDALTFG-SNVLLRHLTFSEARKMPVQEIHLSKVLEGLELDQKAFVDLCILLGCDYTES 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY------ 284
+ G+G KRA LI K KS ++++K++ PP ++ A F+ V
Sbjct: 238 IRGIGPKRAIELIKKHKSIEEILKNIDVK--KYPPPENWNYEGARQLFEEPEVMDAAKIE 295
Query: 285 ----DPKTEDIVHLSC 296
DP E +V C
Sbjct: 296 LKWTDPDEEGMVKFLC 311
>gi|429329192|gb|AFZ80951.1| XPG I domain-containing protein [Babesia equi]
Length = 582
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+A+ ++P I +I + ++ + +VAPYEADAQ+ +L S I+EDSDL+ +GC
Sbjct: 43 QAIYVTPEIIFRVIGLCRKMGIQVVVAPYEADAQVAYLCRSGIASCAISEDSDLLAYGCP 102
Query: 181 RIIFKMDKFGQGVEFQCSMLQKNKDLSFG---GFTKQMLLEMCILSGCDYLQS--LPGMG 235
R+ +K+DK G+ E +K ++ G G + +M + MC+LSG DY + GMG
Sbjct: 103 RVWYKLDKDGKAFEITLPFQSTDKIVNKGFLKGLSHKMFIIMCVLSGTDYDDGNHIRGMG 162
Query: 236 LKRAHALISKFKSYDKVIKHLKYS---TVSVPPFYEES-----FGKAVLTFQHQRVYDPK 287
+K AH L+ +F + ++ L + T +P + + + F H VYD
Sbjct: 163 IKIAHKLVMEFGNVRNILSSLMMNPSWTKKLPTHVSINDLALHYERVSSIFLHNIVYDIT 222
Query: 288 TEDIVHLSCIS 298
+ ++H++ IS
Sbjct: 223 KDRLLHINEIS 233
>gi|238616353|ref|XP_002399029.1| hypothetical protein MPER_00225 [Moniliophthora perniciosa FA553]
gi|215477108|gb|EEB99959.1| hypothetical protein MPER_00225 [Moniliophthora perniciosa FA553]
Length = 99
Score = 104 bits (259), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 64/96 (66%)
Query: 24 GCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLP 83
G +AVD Y WLHKG +C+ EL G PT ++++Y M RV LLRH+G++P ++FDGG LP
Sbjct: 3 GQTIAVDAYVWLHKGVYACATELATGKPTVKYVNYAMERVRLLRHHGIEPYIVFDGGPLP 62
Query: 84 MKIEQENKRARSRKENLARAIECESEGNSSASYEFY 119
K E +R + R+EN+AR S+G S + E+Y
Sbjct: 63 AKQGTEKERKQKREENVARGHALTSQGKHSQAREYY 98
>gi|154337970|ref|XP_001565211.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062258|emb|CAM36646.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1009
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 118/274 (43%), Gaps = 77/274 (28%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHK----------------------- 37
MGI+GL L+ + H+ + G VAVD Y WLH+
Sbjct: 1 MGIKGLWQALREYVDDGHLSQFRGQRVAVDMYVWLHRCVHRSVRIRTEAVIAFFDAKYSS 60
Query: 38 -----GALSC-----SRELCKGLPTSRHID-----------YCMHRVNLLRHYGVKPILI 76
GA S + L P +D + +V+ L+ +GV P+ +
Sbjct: 61 ITGSTGADSLDSRGDTATLASPSPAPLSLDDILVIDDQFVTLVLDKVSALQRFGVIPVCV 120
Query: 77 FDGGLLPMKIEQENKRARSRKENLARAIE--------------CESEGNSSAS------- 115
FDG +PMK + +R R R E A+ C +E ++ +
Sbjct: 121 FDGAEMPMKGGTDEERQRRRAEAFQGALTKLEQLYCDARRRRGCTAEDHADGARIALPRD 180
Query: 116 ---YE----FYQKAVDISPSIAHELIQVLKQQ-NVSYIVAPYEADAQMTFLAVSKQVEAV 167
YE KA DIS +AH +IQVLK++ +V IVAPYEADAQ+ +L V A
Sbjct: 181 TRPYEEAVQLLAKAADISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCRQGYVVAA 240
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
+EDSDLI + C II K+D F +C +LQ
Sbjct: 241 ASEDSDLIAYYCPCIISKLDTFSG----KCEVLQ 270
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 210 GFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP---- 265
FT + L CILSGCDY+ +L +G+K+A L++ S + L+ P
Sbjct: 362 AFTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLERE-FGFPADELR 420
Query: 266 FYEESFGKAVLTFQHQRVYDPKTEDIV 292
Y +A F H VY P T++IV
Sbjct: 421 RYRHRILEAFYCFAHHLVYSPLTQEIV 447
>gi|115456427|ref|NP_001051814.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|62510683|sp|Q75LI2.1|FEN12_ORYSJ RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B; AltName:
Full=OsFEN-1b
gi|317374867|sp|B8AMS4.1|FEN12_ORYSI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|40714676|gb|AAR88582.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|108711942|gb|ABF99737.1| Flap endonuclease-1b, putative, expressed [Oryza sativa Japonica
Group]
gi|113550285|dbj|BAF13728.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|215692762|dbj|BAG88230.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194043|gb|EEC76470.1| hypothetical protein OsI_14202 [Oryza sativa Indica Group]
gi|222626117|gb|EEE60249.1| hypothetical protein OsJ_13256 [Oryza sativa Japonica Group]
Length = 412
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL + +++ G VA+DT +++ + R+ + L
Sbjct: 1 MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDTSLSIYQFLIVVGRKGTEVLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSR---KENLARAIECES 108
+ H+ ++R + G+KP+ +FDG MK ++ KR+ R E+L RAIE
Sbjct: 61 VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEV-- 118
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G+ +F ++ V ++ + ++L V + AP EA+AQ L + +V A+
Sbjct: 119 -GDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIA 177
Query: 169 TEDSDLIPFGCSRIIFKMD----KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
+ED D + FG R + + K EF+ S K L G T +++CILSG
Sbjct: 178 SEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVS-----KVLEELGLTMDQFIDLCILSG 232
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
CDY +++ G+G +RA LI + ++V+++L + SVP P+ E
Sbjct: 233 CDYCENIRGIGGQRALKLIRQHGYIEEVVQNLSQTRYSVPEDWPYQE 279
>gi|159040632|ref|YP_001539884.1| flap endonuclease-1 [Caldivirga maquilingensis IC-167]
gi|189044441|sp|A8M9L3.1|FEN_CALMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157919467|gb|ABW00894.1| XPG I [Caldivirga maquilingensis IC-167]
Length = 350
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 20/273 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
+ +++L G +A+D Y+ L++ S + G P + H+ ++R L Y
Sbjct: 18 VSLEQLNGKLIALDAYNALYQFLASIRQ--PDGTPLMDSQGRVTSHLSGLLYRTINLLEY 75
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG +K+ + KR R R++ + I+ EG S + ++ Q+A+ I+ +
Sbjct: 76 GIKPVYVFDGKPPELKLIEIEKRRRVREKAVEDWIKAVEEGKKSEARKYAQRALFITSDM 135
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E ++L V ++ AP E +AQ ++A V A ++D D FG R++ +
Sbjct: 136 VDEAKRLLDSMGVPWVQAPSEGEAQAAYMASKGIVWAAGSQDYDSFLFGAPRLVRNLTIS 195
Query: 190 GQG--------VEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA 239
G+ VE +++ N L + + L+++ IL G DY + +PG+G +RA
Sbjct: 196 GRRKLPGRDEYVEVTPELIELNDVLKALRLRDRGQLIDLAILLGTDYNPEGIPGIGPQRA 255
Query: 240 HALISKFKSYDKVIKH-LKYSTVSVPPFYEESF 271
LI ++ S DK++ LK + V PF F
Sbjct: 256 LRLIQEYGSLDKLMNTVLKNAQFPVDPFKIREF 288
>gi|328874795|gb|EGG23160.1| XPG [Dictyostelium fasciculatum]
Length = 308
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 11/276 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MG++ L L++ + K LEG +AVDT + L++ + E L
Sbjct: 16 MGVKKLRSLIEEQAPKAIKNTEFKALEGRIIAVDTSNNLYQFLTAIGTENGSSLMNSIGE 75
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R G+KP+ +FDG +K + KR+ +KE E + G
Sbjct: 76 TTSHLQGTFYRTIKFMSNGIKPVFVFDGAPPTLKSGELAKRSAKKKEAKENLDEAKETGT 135
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ + E I++L + + AP EA+AQ L + A +ED
Sbjct: 136 TEDVAKFSKRTTSATRKQNEECIKLLTLMGIPVVRAPCEAEAQCAELVKGGKAWASGSED 195
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG ++I+ + + K L GFT +++CIL GCDY +S+
Sbjct: 196 MDSLAFG-TKILLRNLTASDQKKNPLWEFDHEKLLYGTGFTHDQFIDLCILLGCDYCESI 254
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF 266
G+G RA L+ K KS ++V+KHL + VP PF
Sbjct: 255 RGIGPVRAFELMQKHKSIEEVVKHLDPTKYPVPVPF 290
>gi|393242535|gb|EJD50052.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 165
Score = 103 bits (256), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 30/190 (15%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG+ GL L + HI+ L G + +D Y LH+GAL+C+REL G PT+
Sbjct: 1 MGVTGLFEFLNAKRSHSHIETLAGTWLGIDRYVVLHRGALACARELASGDPTTAWTALMN 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
H+ ++ R+E L RA+ E +G+ A+ Y+
Sbjct: 61 HQRSV------------------------------REEALLRAVTLEKKGDKRAAAVAYK 90
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
++ ++ + + I++L+ ++Y+VAPYEAD Q+ FL V+AV +EDS+L+ FG
Sbjct: 91 ASMAVTTQVVTQTIKILRTAGIAYLVAPYEADVQLAFLDRVGLVDAVYSEDSNLVVFGVQ 150
Query: 181 RIIFKMDKFG 190
+++ K+ G
Sbjct: 151 KVVCKLQDDG 160
>gi|167536429|ref|XP_001749886.1| hypothetical protein [Monosiga brevicollis MX1]
gi|317374912|sp|A9VB27.1|FEN1_MONBE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|163771601|gb|EDQ85265.1| predicted protein [Monosiga brevicollis MX1]
Length = 368
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 11/214 (5%)
Query: 55 HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA 114
H+ +R + ++G+KP+ +FDG MK + KR RKE A E +G++
Sbjct: 63 HLSGLFYRTIRMVNHGIKPLYVFDGKPPTMKSGELLKRGARRKEAQANLEEATEQGDTEQ 122
Query: 115 SYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDL 174
+F ++ V ++ + Q+L + +I+AP EA+AQ L +V A TED D
Sbjct: 123 MEKFSRRLVHVTREHNEQCRQLLTLMGIPFIIAPTEAEAQCAELVKGGKVFATATEDMDA 182
Query: 175 IPFGCSRIIFKMDKFGQG--VEFQCSMLQKNKDLSFGGFTKQM--LLEMCILSGCDYLQS 230
+ FG + ++ M F + + Q LQK GG M ++MCIL GCDY S
Sbjct: 183 LTFGTTVLLRHM-TFSEARKMPIQEFRLQK------GGLEMSMEEFIDMCILLGCDYCDS 235
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
+ G+G ++A+ LI + K+ + V+KHL +P
Sbjct: 236 IKGIGRQKAYQLIKEHKNIETVLKHLDPKKYVIP 269
>gi|116754923|ref|YP_844041.1| flap endonuclease-1 [Methanosaeta thermophila PT]
gi|121693591|sp|A0B9M7.1|FEN_METTP RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|116666374|gb|ABK15401.1| flap endonuclease 1 [Methanosaeta thermophila PT]
Length = 336
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I ++ L GC +AVD ++ L++ LS R+ G P + H+ ++R+ L
Sbjct: 14 ISLENLSGCWIAVDGFNTLYQ-FLSIIRQ-PDGTPLMDASGRVTSHLSGLLYRMTNLIEV 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G++ +FDG P +++ AR++ + A E+ S+ + Q I+ I
Sbjct: 72 GIRVAFVFDG--TPPELKAGTLAARAQMKEAAEIQLQEAIATGVDSFRYAQATARINSEI 129
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRII------ 183
H+ I++L + Y+ AP E +AQ F+A+ V+ V ++D D + FG R++
Sbjct: 130 LHDSIRLLDAMGIPYVQAPSEGEAQAAFMAIRGDVDYVASQDYDSLLFGAPRVVRNLAIT 189
Query: 184 --FKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
KM + ++ ++ ++L+ G +++ L+++ I+ G DY + LP +G KRA
Sbjct: 190 GRRKMPRKNIYIDVPPEVIILEEELTRLGISREQLIDIGIMCGTDYNRGLPKVGPKRALK 249
Query: 242 LISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNI 301
LI + + V+ L S + E AV R+ P ++IV C N
Sbjct: 250 LIREHGCLEAVLDALGESIENFREIRELFLHPAVTESYELRMRKPMVDEIVGFLCNERNF 309
Query: 302 GND 304
D
Sbjct: 310 SED 312
>gi|332376861|gb|AEE63570.1| unknown [Dendroctonus ponderosae]
Length = 380
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 142/299 (47%), Gaps = 21/299 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCK-----GL 50
MGI L L + P IKE + G VA+D L++ ++ E + G
Sbjct: 1 MGILNLTKFLADVA-PHCIKETDIKSYFGRKVAIDASMSLYQFLIAVRSEGAQLTTADGE 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLARAIECE 107
PTS + + LL H G+KP+ +FDG MK + NKR R E L +A+E
Sbjct: 60 PTSHLVGTFYRTIRLLEH-GIKPVYVFDGKPPEMKGGELNKRMEKRAEAQKALDKAMEA- 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G+ + +F ++ V ++ A E ++L+ V YI AP EA+AQ + + ++ A
Sbjct: 118 --GDQAEVDKFNRRLVKVTRHHADEAKELLRLMGVPYIEAPCEAEAQCAAMVKAGKIYAT 175
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + FG S I+ + F + + + L ++ ++ CIL GCDY
Sbjct: 176 ATEDMDALTFG-SDIVLRHLTFSEARKMPIQEIHLKIVLQELNLSQTEFIDFCILMGCDY 234
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
S+ G+G K++ LI +S +K+++++ S PP + ++ A F + DP
Sbjct: 235 TDSIRGIGPKKSIELIKNHRSIEKILENIDKS--KYPPPEDWNYEGARGLFVKPEISDP 291
>gi|313242146|emb|CBY34317.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Query: 1 MGIQGLLPLLKS-IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP--TSRHID 57
MGI GL + + + I + G VA+D W+H+GA+ ++ + P +S I+
Sbjct: 1 MGISGLYDFITACVSKNKSISAIRGQVVAIDMPCWVHRGAVQDAQNVVM-YPEKSSEKIN 59
Query: 58 -YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASY 116
+C+ R+ LL + + PI +FDG LP K ++R R+EN RAI G S+ +
Sbjct: 60 AFCLKRLELLEKHNITPICVFDGEKLPSKKATNDQRRARREENRQRAITALKNGESA--W 117
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
++ +A+ ISP+I + + K++ I APYEADAQ+ +L+ K+V+AVIT
Sbjct: 118 NYFIQAIRISPAITQGVKNMCKEKGYMVITAPYEADAQLAWLSREKRVDAVIT 170
>gi|84994172|ref|XP_951808.1| 5'-3' exonuclease [Theileria annulata strain Ankara]
gi|74952859|sp|Q4UFP0.1|FEN1_THEAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|65301969|emb|CAI74076.1| 5'-3' exonuclease, putative [Theileria annulata]
Length = 506
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 43/279 (15%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCV-----AVDTYSWLHKGALSC-------SRELCK 48
MGI+GL+P L S +P I EL C+ A+D + L++ ++ S K
Sbjct: 1 MGIKGLIPFL-SEKVPSSISELSLECLSGESLAIDASAALYQFTIAIRDSSYFSSLVNSK 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
G TS HI M+R + L YG+KP+ +FD +K + +KR + R+E + S
Sbjct: 60 GESTS-HIYGLMNRCSKLLEYGIKPVFVFDSKPPELKSKTLDKRRQKREEAKTDFKKAIS 118
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
EG+ ++ + + V ++ + ++L+ + I A EA+AQ +L V
Sbjct: 119 EGDKESAKKLVGRTVKVTKDMNDSAKKLLRLMGIPVIEALEEAEAQCAYLVTKNLCHFVA 178
Query: 169 TEDSDLIPFG-----------CSRIIFKMD--KFGQGVEFQCSMLQKNKDLSFGGFTKQM 215
+ED+D + FG ++ I K+D K G+EF +F F
Sbjct: 179 SEDTDTLVFGGWFLLRNVTSSANKKIVKVDLQKVLDGLEF-----------NFDQF---- 223
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
++ CIL GCDY +L G+G K A++L+ K++S +++++
Sbjct: 224 -VDFCILCGCDYCDTLEGVGPKTAYSLVKKYQSLEEIVR 261
>gi|340367941|ref|XP_003382511.1| PREDICTED: flap endonuclease 1-like [Amphimedon queenslandica]
Length = 373
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL LL P IKE E G +A+D L++ ++ ++ + +
Sbjct: 1 MGIHGLSKLLGDYA-PSSIKEHEYKSYFGRKIAIDASMSLYQFLIAVRQDGQVLMTESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG MK + KRA R E ++ E +G+
Sbjct: 60 TTSHLMGFFYRTIRMVDNGIKPVYVFDGKPPTMKSGELAKRADRRAEAQKELLKAEEQGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++P E ++L + Y+ AP EA+AQ L + +V A TED
Sbjct: 120 IQEVEKFQKRLVKVTPEHVSEAKKLLSLMGIPYVEAPCEAEAQCAALTKAGKVYATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S I+ + + + + +K L+ + +++CIL GCDY S+
Sbjct: 180 MDALTFGSS-ILVRNLTASEARKLPVREINLSKALTELDMDQSQFIDLCILLGCDYCDSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
G+G A L+ + + +K++K L +P PF E
Sbjct: 239 KGIGPVNAMKLLRQHGNIEKILKGLSGKKYQIPENWPFEE 278
>gi|219124517|ref|XP_002182548.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405894|gb|EEC45835.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 794
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 144/343 (41%), Gaps = 58/343 (16%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCK-----GLPTSRH 55
MGI LL LK + +I++ VAVD SW HK + + + G +R
Sbjct: 1 MGIPNLLQGLKFAVKKGNIRDYSDQAVAVDASSWFHKSVYAIADHYVEVLERTGRADARS 60
Query: 56 IDYCMHRVN-----LLRHYGVKPI-LIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
I VN +L + ++ I L+ DG P+K+ + R R R+ENLA A +
Sbjct: 61 IAAATQYVNKRCHEILTYARIRKIYLVMDGARCPLKVVTNDDRERRRQENLAEARVFRQQ 120
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQ---NVSYIVAPYEADAQMTFLAVSKQVEA 166
YE Y+ + + +A + Q + V + APYEADAQ+ LA++ V+A
Sbjct: 121 KRPDKMYEKYKACIKVKADLAAAVAQNIASAFPGKVELVWAPYEADAQLVKLAMNGTVQA 180
Query: 167 VITEDSDLIPFGCS-----RIIFKMD-----------------------------KFGQG 192
+ITEDSD++ + + ++FK+D K G
Sbjct: 181 IITEDSDVLVYAATCETTVSVLFKLDRNTGSCDIISMAWLLDPTETLVNPSKANPKKASG 240
Query: 193 VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA--HALISKFKSY 249
+E Q ++ L G ++ ++ CIL+GCDY L G+G A H + K
Sbjct: 241 IE-QIVDAFVSRQLRDPGRGVRLFVQACILTGCDYSPNQLSGVGFVNAFKHVQSAMHKDS 299
Query: 250 DKVIKHL------KYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
+H+ K P YEE ++ F + V +P
Sbjct: 300 KDRFRHVLKMLPRKAKDHLDPVVYEELLAQSESVFYYHPVREP 342
>gi|66811596|ref|XP_639977.1| hypothetical protein DDB_G0284987 [Dictyostelium discoideum AX4]
gi|74854014|sp|Q54NU0.1|FEN1_DICDI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|60466913|gb|EAL64957.1| hypothetical protein DDB_G0284987 [Dictyostelium discoideum AX4]
Length = 384
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 1 MGIQGLLPLLK-----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+ L L++ SI I +K G +A+D + L++ ++ + ++ L
Sbjct: 1 MGIKKLTDLIEDNAPTSIKTNI-LKNYFGRIIAIDASTSLYQFLIAMNADVSSALTNQLG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMK---IEQENKRARSRKENLARAIECE 107
T+ H+ +R L G+KPI +FDG +K + + R + KENL A E
Sbjct: 60 ETTSHLQGMFYRTIKLISRGIKPIYVFDGSAPVLKSGELAKRQARRKEAKENLKEATEV- 118
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G + +F ++ + ++ + I++L V + AP EA+AQ + + A
Sbjct: 119 --GTNEEVQKFAKRVITVTRKQNEDCIKLLTLMGVPIVKAPCEAEAQCAEIVKKGKAWAT 176
Query: 168 ITEDSDLIPFGCS----RIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ED D + G + R+ F K +EF+ + L G T+ +++ IL
Sbjct: 177 GSEDMDSLTLGSTVLLRRLFFSEAKKMPILEFELQSV-----LEGLGLTQDEFIDLSILL 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
GCDY S+ G+G KRA LI K KS ++VIKHL S +P F+
Sbjct: 232 GCDYCDSIKGIGPKRAIELIQKHKSLEEVIKHLDKSKYPLPEFF 275
>gi|29467052|dbj|BAC66965.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|37496995|dbj|BAC98428.1| flap endonuclease-1b [Oryza sativa Japonica Group]
Length = 412
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 27/287 (9%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL + +++ G VA+D +++ + R+ + L
Sbjct: 1 MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDASLSIYQFLIVVGRKGTEVLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSR---KENLARAIECES 108
+ H+ ++R + G+KP+ +FDG MK ++ KR+ R E+L RAIE
Sbjct: 61 VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEV-- 118
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G+ +F ++ V ++ + ++L V + AP EA+AQ L + +V A+
Sbjct: 119 -GDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIA 177
Query: 169 TEDSDLIPFGCSRIIFKMD----KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
+ED D + FG R + + K EF+ S K L G T +++CILSG
Sbjct: 178 SEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVS-----KVLEELGLTMDQFIDLCILSG 232
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
CDY +++ G+G +RA LI + ++V+++L + SVP P+ E
Sbjct: 233 CDYCENIRGIGGQRALKLIRQHGYIEEVVQNLSQTRYSVPEDWPYQE 279
>gi|317374937|sp|C5WU23.2|FEN12_SORBI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
Length = 428
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 24/234 (10%)
Query: 45 ELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLA 101
ELC H+ ++R + G+KP+ +FDG MK ++ KR+ R + +L
Sbjct: 87 ELCS------HLQGMLNRTVRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLN 140
Query: 102 RAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVS 161
RAIE G+ A +F ++ V ++ + ++L+ V + AP EA+AQ L +
Sbjct: 141 RAIEI---GDEDAVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCEN 197
Query: 162 KQVEAVITEDSDLIPFGCSRIIFKMDKFGQG----VEFQCSMLQKNKDLSFGGFTKQMLL 217
QV AV +ED D + FG R + + G EF S K L G T +
Sbjct: 198 HQVYAVASEDMDSLTFGARRFLRHLTDLGYKKSPVTEFDVS-----KVLEELGLTMDQFI 252
Query: 218 EMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
++CILSGCDY +++ G+G +RA LI + ++V+++L + SVP P+ E
Sbjct: 253 DLCILSGCDYCENIKGIGGQRALKLIRQHGCIEEVLQNLNQTRFSVPEDWPYQE 306
>gi|242032391|ref|XP_002463590.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
gi|241917444|gb|EER90588.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
Length = 477
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 24/234 (10%)
Query: 45 ELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLA 101
ELC H+ ++R + G+KP+ +FDG MK ++ KR+ R + +L
Sbjct: 136 ELCS------HLQGMLNRTVRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLN 189
Query: 102 RAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVS 161
RAIE G+ A +F ++ V ++ + ++L+ V + AP EA+AQ L +
Sbjct: 190 RAIEI---GDEDAVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCEN 246
Query: 162 KQVEAVITEDSDLIPFGCSRIIFKMDKFGQG----VEFQCSMLQKNKDLSFGGFTKQMLL 217
QV AV +ED D + FG R + + G EF S K L G T +
Sbjct: 247 HQVYAVASEDMDSLTFGARRFLRHLTDLGYKKSPVTEFDVS-----KVLEELGLTMDQFI 301
Query: 218 EMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
++CILSGCDY +++ G+G +RA LI + ++V+++L + SVP P+ E
Sbjct: 302 DLCILSGCDYCENIKGIGGQRALKLIRQHGCIEEVLQNLNQTRFSVPEDWPYQE 355
>gi|413932542|gb|AFW67093.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 294
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 30/275 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDT----YSWL----HKGALSCSRELCK 48
MGI+GL LL + + +++ G +AVD Y +L KG+ + E
Sbjct: 1 MGIKGLTKLLAQHAPTAAVQRRVEDYRGRVIAVDASVSIYQFLAVVGRKGSELLTNE--A 58
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLARAIE 105
G TS H+ ++R + G+KP+ +FDG MK ++ KR+ R + +L RA+E
Sbjct: 59 GEITS-HLQGMLNRTIRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDAIKDLNRAME 117
Query: 106 CESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE 165
G+ +A +F ++ V ++ + ++L+ V + AP EA+AQ L + QV
Sbjct: 118 I---GDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVY 174
Query: 166 AVITEDSDLIPFGCSRIIFKMDKFGQG----VEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
AV +ED D + FG R + + G EF S K L G T +++CI
Sbjct: 175 AVASEDMDTLTFGARRFLRHLTDLGYKKSPVTEFDVS-----KVLEELGLTMDQFIDLCI 229
Query: 222 LSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
LSGCDY +++ G+G +RA LI + ++V+++L
Sbjct: 230 LSGCDYCENIRGIGGQRALKLIRQHGCIEEVLQNL 264
>gi|328773336|gb|EGF83373.1| hypothetical protein BATDEDRAFT_22008 [Batrachochytrium
dendrobatidis JAM81]
Length = 388
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 15/317 (4%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDT----YSWLHKGALSCSRELC-KGLP 51
MGIQGL ++ + IK G VA+D Y +L S ++L +
Sbjct: 1 MGIQGLSRVICDNAPAATKQNDIKNYFGRKVAIDASMSIYQFLIAVRQSDGQQLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ ++R + G+KP +FDG +K + KR R E A G+
Sbjct: 61 TTSHLMGMLYRTIRMVENGIKPAYVFDGKPPTLKSGELQKRGERRAEAQKEADTALETGD 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++LK + + AP EA+AQ LA + +V A +ED
Sbjct: 121 TENFNRFSRRTVKVTKEQNQECRRLLKLMGIPIVEAPCEAEAQCAALAKAGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG ++ + F + + S K L F+ +++CIL GCDY S+
Sbjct: 181 MDTLTFGAP-VLLRHLTFSEAKKIPISEFNTQKVLEGLNFSHDEFIDLCILLGCDYCDSI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G RA L+ + ++ + +IK + + VP + F +A F+ V DP T
Sbjct: 240 RGIGPHRAVQLMKEHRTIENIIKSIDKTKYKVPENW--PFKEARQLFKEPDVLDPAT--- 294
Query: 292 VHLSCISDNIGNDLDFL 308
V L+ + L FL
Sbjct: 295 VELNWTKPDEAGLLQFL 311
>gi|403162368|ref|XP_003322600.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172578|gb|EFP78181.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 387
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 14/319 (4%)
Query: 1 MGIQGLLPLLKSI----MIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MGI+GL L+ + + IK L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTALINDVAPQAITQSEIKTLFGRKVAIDASMSIYQFLIAVRQQDGQQLMNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG MK +KR R+E E + G
Sbjct: 61 TTSHLMGLFYRTIRMVDNGIKPAYVFDGKPPAMKAGVLSKRFERRQEAKEEGEEAKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++ E ++L + ++VAP EA+AQ L V +ED
Sbjct: 121 TEDIDKLSRRTVKVTREHNEECRRLLTLMGIPWVVAPSEAEAQCAELCRGGLVYGAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + I+ + F + + + K LS T + +E C+L GCDY+ L
Sbjct: 181 MDTLTFG-TPILLRHLTFSEARKMPILTVNLEKVLSGLELTMEQFIEFCVLCGCDYVDPL 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+ K AH L+ + S +KV++HL+ S+ + PP + + +A FQ V P +E
Sbjct: 240 KGVAAKTAHKLMMEHGSLEKVVEHLRESSKNPPP-EDWPWEEARALFQKPEV-TPSSE-- 295
Query: 292 VHLSCISDNIGNDLDFLAK 310
+ L ++ +DFL K
Sbjct: 296 LKLEWKKPDVEGLVDFLVK 314
>gi|260798636|ref|XP_002594306.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
gi|317374877|sp|C3ZBT0.1|FEN1_BRAFL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229279539|gb|EEN50317.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
Length = 380
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC-----KGLP 51
MGIQGL L+ M IK G VA+D +++ ++ ++ G
Sbjct: 1 MGIQGLAKLIGDHAPGAMKENEIKNYFGRKVAIDASMSIYQFLIAVRQDGNMLTNDAGEA 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
TS H+ +R + G+KP+ +FDG MK + KRA R+E + E G
Sbjct: 61 TS-HLMGMFYRTIRMVDNGIKPVYVFDGKPPNMKSGELAKRAERREEAQKALEKAEEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++L + Y+ AP EA+AQ LA +V A TED
Sbjct: 120 AEDVNKFQKRLVKVTKEHNAECKKLLTLMGIPYVDAPCEAEAQCAELAKKGKVYAAGTED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D++ FG + I+ + F + + ++ L+ T+ +++CIL GCDY S+
Sbjct: 180 MDVLTFG-TNIMLRHLTFSEARKMPIKEYYYDRLLAELDLTQDQFIDLCILLGCDYCDSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
G+G KRA LI ++KS ++++KH+ VP
Sbjct: 239 RGIGPKRAIELIRQYKSIEEILKHIDTKKFPVP 271
>gi|326429821|gb|EGD75391.1| flap endonuclease-1 [Salpingoeca sp. ATCC 50818]
Length = 380
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 5/242 (2%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + + GVKP+ +FDG +K + KR RKE ++ EG
Sbjct: 60 TTSHLSGIFYRTIRMVNNGVKPVYVFDGKPPTLKSGELAKRTERRKEAQSKLEAATEEGV 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++P + ++L + YIVAP EA+AQ L + +V A TED
Sbjct: 120 QADMEKFTRRLVKVTPEHNRQCQELLDLMGIPYIVAPCEAEAQCAELVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S ++ M F + + + K L ++ +++CIL GCDY +
Sbjct: 180 MDALTFGTSVLLRHM-TFSEARKMPIQQFELKKVLEGLDLSQDEFIDLCILLGCDYCDKI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYS--TVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
G+G RA++LI + S + +++ +K +VP ++ F +A F++ V K
Sbjct: 239 GGIGRVRAYSLIKEHHSIEAILEAIKKEKKKYTVPDDWK--FAEARELFKNPEVAPAKDI 296
Query: 290 DI 291
D+
Sbjct: 297 DL 298
>gi|294913998|ref|XP_002778227.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239886400|gb|EER10022.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 218
Score = 100 bits (249), Expect = 3e-18, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 43/202 (21%)
Query: 137 LKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG--QGVE 194
LK V +IVA YEADAQ+ ++ + V+AVI+EDSD++P+GC +I K+D+ G Q V+
Sbjct: 4 LKALGVEFIVAAYEADAQLGYMYSAGLVDAVISEDSDVLPYGCKVMIAKLDQAGDCQVVD 63
Query: 195 FQCSML-----------QKNKDLSF--------------GGFTKQMLLEMCILSGCDYLQ 229
++ Q+++ LSF +TK+M ++ C+L+GCDY
Sbjct: 64 ISWALKGGSKLKEKSNEQEDQRLSFRELRNKYGADLANLRDWTKEMFIDACVLAGCDYSH 123
Query: 230 S--LPGMGLKRAHALISKFKSY----------DKVIKHLKYSTVSV--PPF--YEESFGK 273
+ L GMG+K A L++K++ + DK K L Y ++ P F + ++F
Sbjct: 124 ACNLSGMGIKTAMKLVNKYRDWQRTLRALKIEDKFRKQLAYEKCAIGFPAFETFRKNFEL 183
Query: 274 AVLTFQHQRVYDPKTEDIVHLS 295
A F RV+DP+T+ + ++
Sbjct: 184 ARAVFFFHRVFDPRTKRCITMT 205
>gi|355686740|gb|AER98169.1| exonuclease 1 [Mustela putorius furo]
Length = 113
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 72/112 (64%)
Query: 45 ELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI 104
+L KG PT +++ +CM VN+L +G+KPIL+FDG LP K E E R R+ NL +
Sbjct: 2 KLAKGEPTDKYVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGK 61
Query: 105 ECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMT 156
+ EG S + E + ++V+I+ +AH++I+ + Q V +VAPYEADAQ+
Sbjct: 62 QLLREGKVSEARECFTRSVNITHVMAHKVIKAARSQGVDCLVAPYEADAQLA 113
>gi|260815018|ref|XP_002602210.1| hypothetical protein BRAFLDRAFT_76899 [Branchiostoma floridae]
gi|229287517|gb|EEN58222.1| hypothetical protein BRAFLDRAFT_76899 [Branchiostoma floridae]
Length = 513
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 56/226 (24%)
Query: 22 LEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDG-G 80
+EG VAVD WLHKGA +C++EL G PT+ ++++ M + L GV P+++FDG
Sbjct: 1 MEGTVVAVDASVWLHKGAYACAKELVLGQPTNSYVNFFMTSIECLLRNGVTPLVVFDGRR 60
Query: 81 LLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQ 140
LP K + +R R R LA+A ES + + Y +AV+I+P++ +I+V
Sbjct: 61 TLPAKAAEAEERKRKRI--LAKA-TAESASDPQTARSAYTQAVEITPAMVDRVIEV---- 113
Query: 141 NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF---GQGVEFQC 197
++K D+ GQ ++ Q
Sbjct: 114 ------------------------------------------VYKWDRTTMSGQLIK-QT 130
Query: 198 SMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALI 243
S+ + +D+ F K +CIL+GCDYL+S+PG+G++ A +
Sbjct: 131 SLQRSFRDIKDFNFDK--FRCICILAGCDYLKSIPGIGIRMAARFV 174
>gi|118405170|ref|NP_001072959.1| flap endonuclease 1 [Gallus gallus]
gi|82082625|sp|Q5ZLN4.1|FEN1_CHICK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53129083|emb|CAG31359.1| hypothetical protein RCJMB04_5g12 [Gallus gallus]
Length = 381
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 17/276 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +GA E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR R E E +
Sbjct: 60 ---TTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHLQEAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E ++L + Y+ AP EA+A L + +V A
Sbjct: 117 AGEEANIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + N+ L G T + +++CIL GCDY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLNRVLQDLGLTWEQFVDLCILLGCDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
+S+ G+G KRA LI + K+ +++I+H+ +P
Sbjct: 236 ESIRGIGPKRAVELIKQHKTIEEIIQHIDTKKYPLP 271
>gi|198417766|ref|XP_002129714.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 380
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCK-----GLP 51
MGI GL L+ S + IK G VA+D +++ ++ ++ + G
Sbjct: 1 MGILGLSKLICDKAPSAVKENEIKNYFGRKVAIDASMAVYQFLIAIRQDGNQLTNEDGEV 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
TS HI +R L G+KP+ +FDG MK + KRA R++ + + G
Sbjct: 61 TS-HIAGLFYRTIRLLGNGIKPVFVFDGKPPQMKSGELAKRAERREQAEKELAKAQESGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ ++ ++ V ++ + ++L+ + + AP EA+AQ L S +V A TED
Sbjct: 120 AADVEKYSRRLVKVTREHMDDCKKLLRLMGIPVVEAPTEAEAQCASLVKSGKVYATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F SR++ + F + + K L T + +++CIL GCDY + +
Sbjct: 180 MDALTFHSSRLLRHL-TFSEARKMPIQEFVYEKVLEEMEMTHEQFVDLCILLGCDYCEHI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
G+G KRA+ LI +++S D+++K++ +VP +
Sbjct: 239 RGVGPKRAYDLIKQYRSIDEILKNIDLKKYTVPDGW 274
>gi|358333862|dbj|GAA32436.2| flap endonuclease-1 [Clonorchis sinensis]
Length = 350
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
++ H+ +R + G+KP+ +F+G MK + KR R E+ + E E +
Sbjct: 24 STSHLMGMFYRTIRMIENGIKPVYVFEGKPPSMKAGELAKRTERRIESSRELAKAEEEED 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
A +F ++ V ++P + ++L+ V YI AP EA+AQ LA + +V AV TED
Sbjct: 84 LEAIEKFSKRLVKVTPQHNDDCKELLRLMGVPYIKAPGEAEAQCAALAKAGKVYAVGTED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FGC ++ + F + + L+ + +++CIL GCDY+ ++
Sbjct: 144 MDALAFGCP-VLLRHLTFSEARKLPIQEFNLPSVLAGLELSMDQFVDLCILLGCDYVDTI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G K+A L+ K KS ++V+K++ +S VP E + +A F + DP+ +I
Sbjct: 203 RGIGPKKAIDLLRKHKSIEEVLKNIDHSKYPVP--EEWPYEEAKKLFVTPEIEDPEKIEI 260
>gi|328857380|gb|EGG06497.1| hypothetical protein MELLADRAFT_36164 [Melampsora larici-populina
98AG31]
Length = 288
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 129/247 (52%), Gaps = 11/247 (4%)
Query: 5 GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVN 64
GL L+ + PI ++ + +A+D+ WL++ + +GL T+ HI + R++
Sbjct: 1 GLWTLITPVARPIKLETMGNKKLAIDSSIWLYQFQNAMRDREGRGL-TNAHILGFLRRIS 59
Query: 65 LLRHYGVKPILIFDGGLLPMK----IEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
L +YG+KP+ +FDGG +K +E + + +++ ++ E + +
Sbjct: 60 KLLYYGIKPVFVFDGGAPVLKKQTIVEHLYFSSIFKLDDMRHQVDAEVNKLKDQRVKDRR 119
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
A D++ ++ ++ +L+ + Y+++P EA+AQ L V+ +IT+DSD+ FG +
Sbjct: 120 DADDVNLQMSKDIQSMLRLFGIPYVISPMEAEAQCAELLKKGLVDGIITDDSDVFLFGGT 179
Query: 181 RIIFKMDKFGQGVEFQCSMLQK-NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
R+ M F Q +C ++ K+L G ++Q L+++ L G DY + L G+G A
Sbjct: 180 RVYKNM--FNQNKFVECYLMNDLEKEL---GLSRQRLIQLAYLLGSDYTEGLAGVGPVTA 234
Query: 240 HALISKF 246
++S+F
Sbjct: 235 MEILSEF 241
>gi|156395868|ref|XP_001637332.1| predicted protein [Nematostella vectensis]
gi|156224443|gb|EDO45269.1| predicted protein [Nematostella vectensis]
Length = 250
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 14/249 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG++GL LL+ + P+ ++ L+G +AVD S L A+ R+ + H+
Sbjct: 1 MGVKGLWQLLEPVGKPVTLESLQGKVLAVDA-SILMNQAIKGMRDGSGNPVPNAHLFVLF 59
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
HR+ L Y VKP+ +FDGG+ +K + R+ E + + E S +
Sbjct: 60 HRLCKLLFYRVKPVFVFDGGVPVLK---KKTLVRAYLEEMQTNLNREQRTLQSERARQAR 116
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ ++S + +E ++L+ V ++V+P EA+AQ FL ++ Q + IT+DSD+ FG
Sbjct: 117 ASAEVSTEMLNESQELLRLFGVPFLVSPMEAEAQCAFLDMTGQTDGTITDDSDVFLFGGR 176
Query: 181 RI---IFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
R+ IF +K + + C + K LS + ++++ ++G DY + + G+G
Sbjct: 177 RVYKNIFNQNKHAEC--YTCEDIDKGLALS-----RSKMIKLAFVTGSDYTEGIQGLGAV 229
Query: 238 RAHALISKF 246
A ++ +F
Sbjct: 230 SAMEVLHEF 238
>gi|15778123|dbj|BAB68507.1| FEN-1 nuclease [Gallus gallus]
Length = 381
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDT----YSWL---HKGALSCSRELCKG 49
MGI GL L+ S + IK G VA+D Y +L +GA E +
Sbjct: 1 MGIHGLAKLIAERAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGE- 59
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + KR R E E +
Sbjct: 60 --TTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHLQEAQEA 117
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + +F ++ V ++ E ++L + Y+ AP EA+A L + +V A T
Sbjct: 118 GEEANIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAAT 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG S ++ + + + N+ L G T + +++CIL GCDY +
Sbjct: 178 EDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLNRVLQDLGLTWEQFVDLCILLGCDYCE 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI + K+ +++I+H+ +P
Sbjct: 237 SIRGIGPKRAVELIKQHKTIEEIIQHIDTKKYPLP 271
>gi|398396234|ref|XP_003851575.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
gi|339471455|gb|EGP86551.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
Length = 393
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 11/268 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+GL P++K P +KE E G VA+D YS+L + +
Sbjct: 1 MGIKGLYPIIKE-NCPDAVKEGEIKTQFGRKVAIDASMSLYSFLVAVRSGGEQLMSDTGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E E + G
Sbjct: 60 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKSEAQESHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAEAQRLLKLMGIPYIIAPTEAEAQCAVLARGGKVFAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F ++ K+ F + + + ++ L + ++ CIL GCDYL +
Sbjct: 180 MDTLTFASPVLVRKL-TFAEQRKEPVQEIHLDRVLEGLEMDQTQFIDFCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYS 259
G+G K A ALI + K+ + V+ +++ S
Sbjct: 239 KGIGPKSALALIKEHKTLENVVVYIEKS 266
>gi|221052642|ref|XP_002261044.1| flap exonuclease [Plasmodium knowlesi strain H]
gi|317376188|sp|B3L014.1|FEN1_PLAKH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194247048|emb|CAQ38232.1| flap exonuclease, putative [Plasmodium knowlesi strain H]
Length = 595
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 175/403 (43%), Gaps = 58/403 (14%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKG------L 50
MGI+GL + + + I I+ L G VA+D L++ ++ G
Sbjct: 1 MGIKGLTKFIADAAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ + + EG
Sbjct: 61 ETTSHISGLMSRSIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + + AP EA++Q FL A TE
Sbjct: 121 NLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFT------KQML-------- 216
D+D + FG +I ++ + KNK+ S G+ +Q+L
Sbjct: 181 DADALVFGTKILIRNLN-----ANASSTSQNKNKNSSKRGYILTEINLEQVLKGLNLNMN 235
Query: 217 --LEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKA 274
++ CIL GCDY ++ G+G K A+ LI ++ S +K+I+++ + +P + F +A
Sbjct: 236 EFIDFCILCGCDYCDTIKGIGSKTAYNLIKEYNSIEKIIENIDKNKYQIPSNFR--FVEA 293
Query: 275 VLTFQHQRVY----------DPKTEDIVHLSCISD------NIGNDLDFLAKGIAIGD-- 316
+F + +V +PK E++ + I D + N ++ L K +
Sbjct: 294 RDSFINPKVLSKEEIKIDWGEPKIEELKNF-LIKDYNFNEVRVTNYINRLLKARKVTTQR 352
Query: 317 -LDPFTQLPFQEVSDNSHLVVGQNSHLKN-FKPESERKKLDLP 357
LD F F + S +V + S +K KP+ + KK D P
Sbjct: 353 RLDNF----FTACTKKSTKLVNEESQIKKEVKPKRKGKKRDAP 391
>gi|123335114|ref|XP_001294157.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121871805|gb|EAX81227.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 335
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 110/210 (52%), Gaps = 12/210 (5%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLARAIECES 108
T+ H+ + R L GVKP+ +FDG MK + KR R+E L +AIE
Sbjct: 29 TTSHLQGVLSRTVRLIESGVKPVYVFDGKPPEMKGAELAKRLERREEAQKELEKAIE--- 85
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G+ A +F ++ V + + E Q+L+ V Y+ AP EA+A+ L + V+A+
Sbjct: 86 SGDQEAIDKFSRRTVHLDKTQVEECKQLLECLGVPYVDAPCEAEAECAALNKAGLVDAMA 145
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSF--GGFTKQMLLEMCILSGCD 226
TED D + F ++I + +G + +LQ + + G T++ ++ CIL GCD
Sbjct: 146 TEDMDSLAFATPQLIRHLSYGAKGDD----LLQIDYKIMMEKSGLTREEFVDFCILMGCD 201
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
Y ++ G+G K A+ LI K+ + + +IK+L
Sbjct: 202 YCDTIKGIGKKHAYELIKKYHNIETIIKNL 231
>gi|443703547|gb|ELU01026.1| hypothetical protein CAPTEDRAFT_17841 [Capitella teleta]
Length = 464
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 36/259 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR------ 54
MG+ GL LL+S P+ ++ LEG +AVD W+H +L KG+ S
Sbjct: 1 MGVHGLWHLLQSTGRPVTLESLEGKVLAVDVSMWMH--------QLMKGMRDSHGNPVPN 52
Query: 55 -HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
H+ HR+ L +Y +KP+ +FDGG+ +K K+ +L + +E E+ +
Sbjct: 53 AHLIGLYHRICKLLYYRIKPVFVFDGGVPALK-----KQTTDELIDLQKVLEVENTELHN 107
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
+ + A ++ + E ++++ + Y+V+P EA+AQ FL ++ Q +T+DSD
Sbjct: 108 TRNQQDRMATSLTEQMNIEAQELVRLFGLPYVVSPMEAEAQCAFLDLTSQTNGTVTDDSD 167
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM------LLEMCILSGCDY 227
+ FG + + + VE+ F F KQ+ L+ M ++ G DY
Sbjct: 168 IWLFGGRNVYKNLFNSKRHVEW----------FRFEDFEKQLFLTREKLVNMALVCGSDY 217
Query: 228 LQSLPGMGLKRAHALISKF 246
+ G A ++ +F
Sbjct: 218 TPGIHNAGPVAAMEIMGEF 236
>gi|355686743|gb|AER98170.1| exonuclease 1 [Mustela putorius furo]
Length = 668
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 20/177 (11%)
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
EDSDL+ FGC ++I KMD+FG G+E + L + L FT++ MCILSGCDYL
Sbjct: 1 EDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLG-DVFTQEKFRYMCILSGCDYLS 59
Query: 230 SLPGMGLKRAHALISKFKSYDKV-----IKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY 284
SL G+GL +A ++ + D V I H + VP Y + F +A TF +Q V+
Sbjct: 60 SLRGIGLAKACKVLRLANNPDIVKVIRKIGHYLKMNIIVPEDYIKGFIRANNTFLYQLVF 119
Query: 285 DPKTEDIVHLSCISDNIG-----------NDLDFLAKGIAIGDLDPFTQLPFQEVSD 330
DP ++ L+ D+I +D D +A IA+G+ D T F+++ D
Sbjct: 120 DPIKRKLLPLNAYEDDIDPETLSYAGQYFDDSDSIALQIALGNKDINT---FEQIDD 173
>gi|16758170|ref|NP_445882.1| flap endonuclease 1 [Rattus norvegicus]
gi|8896169|gb|AAF81265.1|AF281018_1 flag structure-specific endonuclease [Rattus norvegicus]
Length = 380
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ IFDG +K Q KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSAQLAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + + + F V DP++
Sbjct: 236 ESVRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHKEARQL--FLEPEVVDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|403222552|dbj|BAM40684.1| 5'-3' exonuclease [Theileria orientalis strain Shintoku]
Length = 824
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 131/267 (49%), Gaps = 21/267 (7%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSC------SRELCKGL 50
MGI+GL+P L M + ++ L G +AVD + L++ ++ S +
Sbjct: 1 MGIKGLIPFLNEKVPGSMTEMSLESLSGESIAVDASTALYQFTIAIRDSSYFSSLVNASG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
++ H+ M R + L G+KP+ +FD +K++ KR + R+E + +EG
Sbjct: 61 ESTSHLYGMMSRCSKLLECGIKPVFVFDSKPPELKLKTLEKRRQRREEASTSLKQAIAEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ + + + V ++ + ++L+ V I AP EA+AQ +L + V +E
Sbjct: 121 DKESIKKLMGRTVKVTKEMNDSAKKLLRLMGVPVIEAPEEAEAQCAYLVRNSLCRFVASE 180
Query: 171 DSDLIPFGCSRIIFKM----DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D+D + FG ++ + +K V+ Q ++ K DL+F F ++ CIL GCD
Sbjct: 181 DTDTLAFGGGYLLRNVTASSNKKIVKVDLQKAL--KGLDLTFEQF-----VDFCILCGCD 233
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVI 253
Y +L G+G K A+ L+ + S ++++
Sbjct: 234 YCDTLEGVGPKTAYTLVKRHASLEEIV 260
>gi|326919868|ref|XP_003206199.1| PREDICTED: flap endonuclease 1-like [Meleagris gallopavo]
Length = 381
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 17/276 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +GA E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + +R R E E +
Sbjct: 60 ---TTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELARRTERRSEAEKHLQEAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E ++L + Y+ AP EA+A L + +V A
Sbjct: 117 AGEETNIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + N+ L G T + +++CIL GCDY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASETKKLPIQEFHLNRILQDLGLTWEQFVDLCILLGCDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
+S+ G+G KRA LI + K+ +++I+H+ +P
Sbjct: 236 ESIRGIGPKRAVELIKQHKTIEEIIQHIDTKKYPLP 271
>gi|115465159|ref|NP_001056179.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|62510701|sp|Q9SXQ6.1|FEN11_ORYSJ RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A; AltName:
Full=OsFEN-1a
gi|4587225|dbj|BAA36171.1| FEN-1 [Oryza sativa Japonica Group]
gi|113579730|dbj|BAF18093.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|222632398|gb|EEE64530.1| hypothetical protein OsJ_19381 [Oryza sativa Japonica Group]
Length = 380
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ +R L G+KP+ +FDG +K ++ KR R++ E EG
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A +F ++ V ++ E ++L+ V + AP EA+A+ L ++ V AV +E
Sbjct: 120 DKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG R + MD + + EF+ + + + +L+ F +++CILSGCD
Sbjct: 180 DMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
Y S+ G+G + A LI + S + +++++ +P P+ E
Sbjct: 235 YCDSIKGIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQE 279
>gi|317374863|sp|B8AW67.1|FEN11_ORYSI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|218197185|gb|EEC79612.1| hypothetical protein OsI_20807 [Oryza sativa Indica Group]
Length = 380
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ +R L G+KP+ +FDG +K ++ KR R++ E EG
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A +F ++ V ++ E ++L+ V + AP EA+A+ L ++ V AV +E
Sbjct: 120 DKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG R + MD + + EF+ + + + +L+ F +++CILSGCD
Sbjct: 180 DMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
Y S+ G+G + A LI + S + +++++ +P P+ E
Sbjct: 235 YCDSIKGIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQE 279
>gi|126344550|ref|XP_001362314.1| PREDICTED: flap endonuclease 1-like [Monodelphis domestica]
Length = 380
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL----HKGALSCSRELC 47
MGI GL L+ + P I+E + G VA+D Y +L H G + + E
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRHGGDMLQNEE-- 57
Query: 48 KGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
G TS H+ +R + G+KP+ +FDG +K + KR R E + +
Sbjct: 58 -GEATS-HLVGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRGERRAEAERQLQQAL 115
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G + +F ++ V ++ E Q+L+ + Y+ AP EA+A LA + +V A
Sbjct: 116 DAGAQEEADKFSKRLVKVTKEHNDECKQLLRLMGIPYLEAPGEAEASCAALAKAGKVYAA 175
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + FG S ++ + + + ++ L G T++ +++CIL G DY
Sbjct: 176 ATEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQGLGLTQEQFVDLCILLGSDY 234
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
+S+ G+G KRA LI + KS +++I+ L S VP
Sbjct: 235 CESIRGIGPKRAIDLIQQHKSIEEIIRKLDPSKYPVP 271
>gi|269859663|ref|XP_002649556.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
gi|317374899|sp|B7XHS8.1|FEN1_ENTBH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220067107|gb|EED44575.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
Length = 358
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 18/323 (5%)
Query: 1 MGIQGLLPLLKSI----MIPIHIKELEGCCVAVDTYSWLHKGALSCSRE---LCKGLPTS 53
MGI+ L L+K+ + +K G +A+D +++ ++ E L G T+
Sbjct: 1 MGIKRLSKLIKTYCSEGVQNRELKYYSGYKIAIDASMCIYQFLVAVRAEGQSLSWGDSTT 60
Query: 54 RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
HI +R G+ P+ +FDG KI + KR + R++ A+ + + +
Sbjct: 61 SHISGIFYRSIRWIENGIIPVFVFDGIPPEEKIHEFEKRTKRRQDINAKLQDAIEQQDQV 120
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
++ + V + S E + L+ N+ Y++AP EA+A +L SK V+AV TED D
Sbjct: 121 LVSKYDRMNVKMEKSHIEECQKTLRLLNIPYVIAPSEAEAYCAWLCKSKFVDAVATEDMD 180
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKN--KDLSFGGFTKQMLLEMCILSGCDYLQSL 231
+ FG + + F + + + + N K L FT + +++CIL GCDY ++
Sbjct: 181 SLCFGSPLL---LRNFNTALSQKLPVEEYNLHKILEGLQFTMEQFVDLCILLGCDYSATI 237
Query: 232 PGMGLKRAHALISKFKSYDKVI------KHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD 285
G+G+KRA I K+KS D +I KY F + T ++ +
Sbjct: 238 RGVGMKRAFEYIKKYKSIDNLIGIVDFPDDFKYKEARTIFFTLGTDTSNNFTNENPINTN 297
Query: 286 PKTEDIVHLSCISDNIGNDLDFL 308
T D++ + S NI +DFL
Sbjct: 298 IATWDLIAVDSASINIEAVIDFL 320
>gi|84489880|ref|YP_448112.1| flap endonuclease-1 [Methanosphaera stadtmanae DSM 3091]
gi|121717163|sp|Q2NFD4.1|FEN_METST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|84373199|gb|ABC57469.1| flap structure-specific endonuclease [Methanosphaera stadtmanae DSM
3091]
Length = 328
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 125/248 (50%), Gaps = 10/248 (4%)
Query: 16 PIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRH 68
PI +KELEG + VD + ++K LS R+ G P + H++ M + + L
Sbjct: 13 PIEMKELEGKILTVDASNVIYK-FLSSMRQ-TDGTPLRDLNGHITSHLNGIMFQTSTLIE 70
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
+KP+ +FDG +K E + +R +KE+ + +E + G+ A+ ++ + ++
Sbjct: 71 KDIKPVYVFDGKAPDLKKETQEERINIKKESEKKYLEAKEVGDVVAARKYAARTTHLNKE 130
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
I ++L + Y+ A E +AQ +++ AV+++D D + FG +R+I + K
Sbjct: 131 IIKSSKKLLDLMGIPYVQARTEGEAQASYMVSQNDAWAVVSQDYDCLQFGATRMIRNL-K 189
Query: 189 FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKS 248
+ ++ K L T++ L+++ +L G D+ + + G+G K+ LI K+ +
Sbjct: 190 LSKSNSKNLELISLEKTLKELNLTREQLVDVAMLVGTDFNKGVYGIGAKKGIKLIHKYGT 249
Query: 249 YDKVIKHL 256
+K ++ L
Sbjct: 250 LEKALESL 257
>gi|159118360|ref|XP_001709399.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
gi|317374902|sp|A8B672.1|FEN1_GIAIC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157437515|gb|EDO81725.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
Length = 361
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 141/300 (47%), Gaps = 22/300 (7%)
Query: 1 MGIQGLLPLLKSIM-IPIHIKELEGCC---VAVDTYSWLHKGALSCSRELCKGLPTSR-- 54
MGI+GL L++ + + + ++ C +A+D L++ + + L S
Sbjct: 1 MGIRGLAKLIEEVAPAAVSKRLIQHYCNKVIAIDASVMLYQFITTITSGDGTALANSSGE 60
Query: 55 ---HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
H+ + +V L G+KPI +FDG K + KR ++R+ + E EGN
Sbjct: 61 VTSHLVGLLAKVIRLAEAGIKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGN 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++ + ++L + Y+VA EA+AQ +A + E V + D
Sbjct: 121 LERAKQLSRRTVKVTQQHCKQAERLLDTLGIPYVVAAGEAEAQCVAMAKERVCEGVASSD 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D++ FG +I + QG + + + N L GF+ L++CIL GCDY SL
Sbjct: 181 LDVLAFGSPCLIRNL---AQGGDREIVEINLNTVLKELGFSYDEFLDLCILCGCDYANSL 237
Query: 232 PGMGLKRAHALISKFKSYDKVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
G+G K A+ LI K +S ++V+ L ++ P + +A F++ V DPK
Sbjct: 238 EGIGPKTAYKLIVKHRSIEEVLAADQGKLAEKALNWP------YVRARELFKNPAVIDPK 291
>gi|156094601|ref|XP_001613337.1| flap exonuclease [Plasmodium vivax Sal-1]
gi|317376189|sp|A5KAL1.1|FEN1_PLAVS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148802211|gb|EDL43610.1| flap exonuclease, putative [Plasmodium vivax]
Length = 623
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 34/315 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKG------L 50
MGI+GL + + + I I+ L G VA+D L++ ++ G
Sbjct: 1 MGIKGLTKFIADAAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ + + EG
Sbjct: 61 ETTSHISGLMSRSIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + + AP EA++Q FL A TE
Sbjct: 121 NLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFT------KQML-------- 216
D+D + FG +I ++ + KNK+ S G+ +Q+L
Sbjct: 181 DADALVFGTKILIRNLN-----ANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMN 235
Query: 217 --LEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKA 274
++ CIL GCDY ++ G+G K A+ LI ++ S +K+I+++ + VP + F +A
Sbjct: 236 EFIDFCILCGCDYCDTIKGIGSKTAYNLIKEYNSIEKIIENIDKNKYQVPSNFR--FVEA 293
Query: 275 VLTFQHQRVYDPKTE 289
+F + +V PK E
Sbjct: 294 RDSFINPKVL-PKEE 307
>gi|324514356|gb|ADY45841.1| Flap endonuclease 1-B [Ascaris suum]
Length = 320
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 21/249 (8%)
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK E+ KR R E + E + +G++ A +F ++ V ++
Sbjct: 14 GIKPVYVFDGKPPEMKCEELEKRTERRVEAEKQLAEAKEKGDAMAVEKFERRLVKVTKDQ 73
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMD-- 187
E ++L+ V AP EA+AQ L + +V A TED D + FG R++ ++
Sbjct: 74 NEEAKKLLRLMGVPVFDAPCEAEAQCAELVRAGKVFAAATEDMDALAFGSKRLLRQLTAS 133
Query: 188 --KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISK 245
K E + K+ ++ F +++CIL GCDY +++ G+G K+A LI K
Sbjct: 134 EAKKLPVKEINLEQVLKDFEMDMPQF-----VDLCILLGCDYTKTIRGIGPKKAFELIQK 188
Query: 246 FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD----------PKTEDIVHLS 295
K+ + V++++ VP ++ F +A F + + P TE+IV
Sbjct: 189 HKTIENVLENIDTEKYPVPENWQ--FREARRLFMKPEITNCEDINLQWGKPDTEEIVRYL 246
Query: 296 CISDNIGND 304
C N +
Sbjct: 247 CGEKNFNEE 255
>gi|327278874|ref|XP_003224185.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Anolis
carolinensis]
Length = 515
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 155/353 (43%), Gaps = 37/353 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
GI GL L+ I P I+E + G VA+D Y +L +GA E +
Sbjct: 134 WGIHGLAKLIADIA-PAAIREXDIKSYFGRKVAIDASMSIYQFLIAVRQGADMLQNEEGE 192
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR R E + E +
Sbjct: 193 ---TTSHLMGMFYRTIRMVENGLKPVYVFDGKPPQLKSGELAKRIERRTEAEKQLQEAKE 249
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E ++L + Y+ AP EA+A L + +V A
Sbjct: 250 AGEEENVEKFSKRLVKVTKQHNEECKKLLTLMGIPYVDAPGEAEASCAALVKANKVYAAA 309
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L T++ +++CIL GCDY
Sbjct: 310 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQDLSLTQEEFVDLCILLGCDYC 368
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD--- 285
+S+ G+G KRA LI + KS +K+I+ + S+P + +A F V D
Sbjct: 369 ESIRGIGPKRAVELIKQHKSIEKIIQQIDTKKYSLPENWLHK--EAQQLFLEPEVIDAEA 426
Query: 286 -------PKTEDIVHLSCI-----SDNIGNDLDFLAK---GIAIGDLDPFTQL 323
P E++V+ C + I N + L K G G LD F ++
Sbjct: 427 VELKWSEPNEEELVNFMCGEKQFNEERIRNGVKRLNKSRQGSTQGRLDDFFKI 479
>gi|389582194|dbj|GAB64749.1| flap exonuclease [Plasmodium cynomolgi strain B]
Length = 624
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 31/293 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKG------L 50
MGI+GL + + + I I+ L G VA+D L++ ++ G
Sbjct: 1 MGIKGLTKFIADAAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ + + EG
Sbjct: 61 ETTSHISGLMSRSIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + + AP EA++Q FL A TE
Sbjct: 121 NLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFT------KQML-------- 216
D+D + FG +I ++ + KNK+ S G+ +Q+L
Sbjct: 181 DADALVFGTKILIRNLN-----ANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMN 235
Query: 217 --LEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
++ CIL GCDY ++ G+G K A+ LI ++ S +K+I+++ + VP +
Sbjct: 236 EFIDFCILCGCDYCDTIKGIGSKTAYNLIKEYNSIEKIIENIDKNKYQVPSNF 288
>gi|81883819|sp|Q5XIP6.1|FEN1_RAT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53733451|gb|AAH83630.1| Fen1 protein [Rattus norvegicus]
gi|149062370|gb|EDM12793.1| flap structure-specific endonuclease 1 [Rattus norvegicus]
Length = 380
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ IFDG +K + KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESVRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EARQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|317376190|sp|D3BN56.1|FEN1_POLPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|281203217|gb|EFA77418.1| XPG [Polysphondylium pallidum PN500]
Length = 388
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MGI+ L L++ S + +K G VA+D + +++ ++ + E+ L
Sbjct: 1 MGIKNLTSLIEENAPSAIKSNDLKSYSGRIVAIDASTSMYQFLIAINTEMGAALMNANGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KPI +FDG +K + KR RKE + E GN
Sbjct: 61 TTSHLQGMFYRTIKLMTRGIKPIYVFDGKAPVLKSGELAKRYARRKEAEQQLEEANEVGN 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
S +F ++ + S E ++L+ V + AP EA+AQ L + A +ED
Sbjct: 121 SEDVQKFQKRTISASRKQNEECKKLLELMGVPIVQAPCEAEAQCAELCKGGKAWATGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + G + I+ + F + + ++ K L T +++CIL GCDY ++
Sbjct: 181 MDSLTLGTT-ILLRRLTFSEARKLPIMEIELEKVLDGLDLTHDQFVDLCILLGCDYCDTI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESF 271
G+G K++ +I+K K+ VI+++ + +P ESF
Sbjct: 240 KGIGPKKSFDMITKHKNIQTVIQNIDRTKNPIP----ESF 275
>gi|431910392|gb|ELK13465.1| Flap endonuclease 1 [Pteropus alecto]
Length = 381
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E R + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKRLQQAQD 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 VGTEEDVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|358054307|dbj|GAA99233.1| hypothetical protein E5Q_05927 [Mixia osmundae IAM 14324]
Length = 389
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 17/320 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGL----- 50
MGI+GL L+ + P I++LE G VAVD +++ ++ ++ + L
Sbjct: 1 MGIKGLTNLISDVA-PKAIRQLEMKNLFGRKVAVDASMSIYQFLIAVRQQDGQQLMNESG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP +FDG +K KR R E + + G
Sbjct: 60 ETTSHLMGFFYRTIRMVENGIKPAYVFDGKPPDLKSGVLKKRFAKRAEATEEGEDAKETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ ++ V ++ E ++LK + +I+AP EA+AQ L V +E
Sbjct: 120 TVEEIDKLSRRTVRVTKEHNEECQRLLKLMGIPFIIAPSEAEAQCAELCRGGLVYGTGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F S II + F + + +++ ++ L T ++MCILSGCDY+
Sbjct: 180 DMDTLTF-SSPIILRHLTFSEQRKLPIDVIELSEVLKGMELTMDEFIDMCILSGCDYVDP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
LP +G K A LI D V++ LK + + P + + +A F+H V K E+
Sbjct: 239 LPKIGAKTALKLIKDHGDLDAVVEALKDTPRAAPEDW--PYREARELFKHPDVL--KAEE 294
Query: 291 IVHLSCISDNIGNDLDFLAK 310
V L +I +DFL +
Sbjct: 295 -VDLKWEDPDIEGLVDFLVR 313
>gi|302843818|ref|XP_002953450.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300261209|gb|EFJ45423.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 397
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 20/285 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-----LEGCCVAVDTYSWLHKGALSCSRELCKGLPT--- 52
MGI GL LL P IKE L G VAVD +++ + R+ + L
Sbjct: 1 MGIHGLTKLLGD-NAPGCIKETKFENLFGRKVAVDASMHIYQFMVVVGRQGDQLLTNEAG 59
Query: 53 --SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARS-RKENLARAIECESE 109
+ H+ R + G+KP+ +FDG P +++Q+ RS R+ + A+E E
Sbjct: 60 DITSHLQGMFFRTARMLEAGIKPVYVFDGK--PPQLKQDQLAMRSERRADANEALEKAKE 117
Query: 110 -GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G++ A ++ +++V ++ + ++L+ V + AP EA+AQ +A + V +
Sbjct: 118 AGDAEAVEKYSKRSVRVTKEHNEDCKRLLRLMGVPVVEAPSEAEAQCAEMAKAGLVYGLA 177
Query: 169 TEDSDLIPFGCSRIIFK-MDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + FG R+I M V Q + + L G ++MCIL GCDY
Sbjct: 178 TEDMDALTFGAPRVIRHLMAPSSSNVPVQ--EIDRAVALQELGLDDDQFIDMCILMGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF-YEES 270
++ G+G RA LI K S + +++ L + VP PF Y+ES
Sbjct: 236 CGTIRGIGAVRALQLIKKHGSIEAILEELDKAKFPVPEPFPYKES 280
>gi|268564494|ref|XP_002639126.1| C. briggsae CBR-CRN-1 protein [Caenorhabditis briggsae]
gi|317374879|sp|A8XL25.1|FEN1_CAEBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 382
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 143/322 (44%), Gaps = 21/322 (6%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSC----SRELCKGLPT 52
MGI+GL ++ S + IK G VA+D L++ ++ S+ + T
Sbjct: 1 MGIKGLSQVIADHAPSAIKVQEIKAFFGRKVAIDASMCLYQFLIAIRQDGSQMQSEDGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R + G+KP+ +FDG MK + KR R E E + +G++
Sbjct: 61 TSHLMGMFYRTIRMIDNGIKPVYVFDGKPPDMKSGELEKRTERRAEAEKALTEAKEKGDA 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ +F ++ V ++ E+ Q+L + + AP EA+AQ L + +V TED
Sbjct: 121 KEAEKFERRLVKVTKQQNEEVKQLLGLMGIPVVEAPCEAEAQCANLVKAGKVYGTATEDM 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
D + FG S ++ + + + + L TK +++CIL GCDY ++
Sbjct: 181 DALTFG-SCVLLRHLLAPEAKKIPIKEFHLARVLEEMQLTKDQFIDLCILLGCDYCGTIR 239
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY-------- 284
G+G K+A LI + K+ + V++++ + PP + + +A F V
Sbjct: 240 GIGPKKAVELIKQHKNIETVLENIDQT--KYPPPADWPYKRARELFHEPEVMKCDEVELT 297
Query: 285 --DPKTEDIVHLSCISDNIGND 304
DP E IV C N D
Sbjct: 298 WKDPDVEGIVKFMCGEKNFSED 319
>gi|301117906|ref|XP_002906681.1| flap endonuclease 1 [Phytophthora infestans T30-4]
gi|317374909|sp|D0MY34.1|FEN1_PHYIT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|262108030|gb|EEY66082.1| flap endonuclease 1 [Phytophthora infestans T30-4]
Length = 389
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 134/283 (47%), Gaps = 22/283 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE------GCCVAVDTYSWLHKGALSCSRELCKGLPT-- 52
MGI+GL+ LL+ P IKE+E G VA+D L++ ++ R G P+
Sbjct: 1 MGIKGLMKLLQE-EAPSCIKEVEKMSALAGHAVAIDASMALYQFLIAI-RSADGGGPSQA 58
Query: 53 --------SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI 104
+ H+ R + G+KP+ +FDG MK + KR+ R+E
Sbjct: 59 LTNADGEVTSHLQGMFSRTIRMMENGLKPVYVFDGKPPVMKSGELAKRSDRRQEAQKALE 118
Query: 105 ECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQV 164
E +GN+ F ++ V +P + ++L+ V +I AP EA+A LA +V
Sbjct: 119 EATEKGNAEDIDRFNKRLVRATPQHNEDCKELLRLMGVPHITAPCEAEASCAALAKGGRV 178
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
A TED D + FG ++++ + ++ + L T + +++CIL G
Sbjct: 179 YAAGTEDMDALTFGVP-VLYRRLTVSPAKKIPILEIRLERALQELEMTHEQFVDLCILCG 237
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYD---KVIKHLKYSTVSVP 264
CDY S+ G+G K+A+A I + KS + +V++ K V +P
Sbjct: 238 CDYCDSIRGVGPKKAYAGIKEHKSIENFLEVLQKNKSKGVVIP 280
>gi|449283444|gb|EMC90086.1| Flap endonuclease 1 [Columba livia]
Length = 382
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 140/312 (44%), Gaps = 22/312 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +GA E +
Sbjct: 1 MGIHGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR R E E +
Sbjct: 60 ---TTSHLMGMFYRTIRMVESGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + ++ ++ V ++ E ++L + Y+ AP EA+A L + +V A
Sbjct: 117 AGEENNIEKYSKRLVKVTQQHNDECKKLLTLMGIPYLEAPGEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + N+ L G T + +++CIL GCDY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASETKKLPIQEFHLNRILQDLGLTWEQFVDLCILLGCDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI + K+ +K+++ + +P + +A F V DP
Sbjct: 236 ESIRGIGPKRAVELIKEHKTIEKIVQQIDTKKYPLPENWLHK--EAQKLFLEPDVVDP-- 291
Query: 289 EDIVHLSCISDN 300
D V L N
Sbjct: 292 -DAVELKWTEPN 302
>gi|170593271|ref|XP_001901388.1| Flap endonuclease-1 [Brugia malayi]
gi|317374878|sp|A8QCH0.1|FEN1_BRUMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158591455|gb|EDP30068.1| Flap endonuclease-1, putative [Brugia malayi]
Length = 378
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 20/305 (6%)
Query: 17 IHIKELEGCC---VAVDTYSWLHKGALSC----SRELCKGLPTSRHIDYCMHRVNLLRHY 69
I +KE +G VAVD L++ ++ S+ + T+ H+ +R +
Sbjct: 18 IRLKEFKGYFGRKVAVDASMCLYQFLIAVRQDGSQLQTESGETTSHLLGMFYRTIRMIDN 77
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK + KR R E + + G+ ++ +F ++ V ++
Sbjct: 78 GIKPVYVFDGKPPQMKTSELEKRTERRTEAEKQRNDAVELGDETSVNKFEKRLVKVTKEQ 137
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ E +++ + + AP EA+AQ LA + +V A ++ED D + FG S I+ +
Sbjct: 138 SEEAKRLVTLMGIPVLDAPCEAEAQCAALAKAGKVFATVSEDMDALTFG-SPILLRQMIA 196
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSY 249
+ + + N+ L G +++CIL GCDY+ ++ G+G K+A LI K++
Sbjct: 197 SEAKKLPVKEMNLNQVLKDFGMNMGQFVDLCILLGCDYVSTIRGIGPKKAFELIKKYECI 256
Query: 250 DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY----------DPKTEDIVHLSCISD 299
+ V++ + + +P ++ + +A F V +P E IV C+
Sbjct: 257 ENVLETINQTKYPIPQDWQ--YKEARRLFLEPDVMNCENLELVWKEPDVEGIVQFLCVEK 314
Query: 300 NIGND 304
+ D
Sbjct: 315 SFNED 319
>gi|443720454|gb|ELU10206.1| hypothetical protein CAPTEDRAFT_21886 [Capitella teleta]
Length = 377
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 14/278 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGIQGL ++ P +KE E G VA+D +++ ++ +E
Sbjct: 1 MGIQGLSKVIGDYA-PSAVKENEIKNFFGRKVAIDASMCIYQFLIAVRQEGNMLTNADGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG MK + +KRA R+E + E G
Sbjct: 60 TTSHLMGIFYRTLRMIDHGIKPVYVFDGKPPDMKSGELSKRAGRREEAQKALEKAEEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E Q+L + ++ AP EA+AQ L V A TED
Sbjct: 120 AENVEKFSKRLVKVTKEHNEECKQLLGLMGIPFVEAPCEAEAQCASLVKGGHVYATGTED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S ++ + F + + K L+ + + +++CIL GCDY S+
Sbjct: 180 MDALTFG-STVLLRHLTFSEARKMPIKEFSLEKVLAGLELSYEEFIDLCILLGCDYCDSI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PF 266
G+G KRA LI + +S + V+K++ ++P PF
Sbjct: 239 RGIGPKRAVDLIKQHRSIEAVLKNIDTKKYTIPEDWPF 276
>gi|317374923|sp|A7UW97.2|FEN1_NEUCR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 394
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKQLFSVIKD-EAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNEAGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YIVAP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + K L G ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFNAP-ILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + +KV++ +K
Sbjct: 239 PKVGPSTALKLIREHGTLEKVVEWMK 264
>gi|253744402|gb|EET00616.1| Flap structure-specific endonuclease [Giardia intestinalis ATCC
50581]
Length = 361
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 142/300 (47%), Gaps = 22/300 (7%)
Query: 1 MGIQGLLPLLKSIM-IPIHIKELEGCC---VAVDTYSWLHKGALSCSRELCKGLPTSR-- 54
MGI+GL L++ I + + ++ C +A+D L++ + + L S
Sbjct: 1 MGIRGLAKLIEEIAPAAVSKRLIQHYCNRVIAIDASVMLYQFITTITSGDGTALANSSGE 60
Query: 55 ---HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
H+ + +V + G+KPI +FDG K + KR ++R+ + E EG+
Sbjct: 61 ITSHLVGLLSKVTRMVEAGIKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGD 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++ + ++L + Y+VA EA+AQ +A + E V + D
Sbjct: 121 IERAKQLSRRTVKVTQQHCKQAEKLLDILGIPYVVAAGEAEAQCVAMAKAGLCEGVASSD 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D++ FG +I + QG + + + + L+ GF+ L++CIL GCDY SL
Sbjct: 181 LDVLAFGSPSLIRNL---AQGGDKEIMEINLDTVLNELGFSYDEFLDLCILCGCDYANSL 237
Query: 232 PGMGLKRAHALISKFKSYDKVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
G+G K A+ LI K++S ++ + L V+ P + +A F++ V +PK
Sbjct: 238 EGIGPKTAYKLIVKYRSIEEALAADQGKLAEKAVNWP------YARARELFKNPTVINPK 291
>gi|440633913|gb|ELR03832.1| flap endonuclease-1 [Geomyces destructans 20631-21]
Length = 395
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L +++ P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKQLFSIIRD-EAPQAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSEGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLLGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFARKAEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V +S E Q+LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVSRQHNAECQQLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + +K L G ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFD-SPILIRHLTFSEARKEPIQEIHVDKVLEGLGMDRKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL 256
P +G A +I + S +KV++ +
Sbjct: 239 PKIGPNTALKMIREHGSLEKVVEWI 263
>gi|452822684|gb|EME29701.1| flap endonuclease-1 [Galdieria sulphuraria]
Length = 377
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 29/307 (9%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPT 52
MGI+GL LL S + +K G +A+D Y +L +
Sbjct: 1 MGIKGLTKLLGDYAPSCVQQQELKNYFGRKIAIDASMNIYQFLSAVRAGADNLRNEAGEV 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R L G+ P +FDG +K + +KR +R++ A A + EG+
Sbjct: 61 TSHLSGLFYRTTRLMELGIMPCYVFDGKPPELKSGELSKRIEARRQAEASAALAKEEGDV 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
A +F ++ +SP + + ++L+ + + AP EA+AQ L V A +ED
Sbjct: 121 EAYEKFNRRVNKVSPEVIEQSKRLLRLMGIPILEAPEEAEAQCASLCKENLVYATASEDM 180
Query: 173 DLIPFGCSRIIFKM--------DKFG-QGVEF--QCSMLQKNKDLSFGGFTKQMLLEMCI 221
D + FG S++I ++ +K G +EF + ++L+ N F+ + +++CI
Sbjct: 181 DSLTFGSSKVIRQLWVGATSTAEKKGIHPLEFSLEKALLELN-------FSYEQFIDLCI 233
Query: 222 LSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQ 281
L GCDYL S+ G+G +A LI K + + ++ +K VP + + KA F
Sbjct: 234 LCGCDYLDSIRGIGPYKAFNLIRKHGNLEGALEEIK-EKHDVPDHF--PYDKARELFLKP 290
Query: 282 RVYDPKT 288
+V+ P +
Sbjct: 291 KVHSPSS 297
>gi|440797493|gb|ELR18579.1| XPG Iregion domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 434
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ R L YG+KP+ +FDG MK + KR+ +KE E G+
Sbjct: 25 TTSHLMGIWSRTLRLIAYGIKPVYVFDGRPPVMKGTELKKRSAKKKEAEQGLEEATELGD 84
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++P E ++L+ + + AP EA+AQ L + +V A +ED
Sbjct: 85 TETMRKLEKRTVHVTPKHNEECKKLLRLMGIPVVEAPTEAEAQCAELCRAGKVFATGSED 144
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F + I+ + + + + + K L G T + +++CIL+GCDY ++
Sbjct: 145 MDSLTF-ATPILLRHLNYAEAQKKPIIEIDLEKVLKGFGMTMEQFIDLCILAGCDYCDTI 203
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF-YE 268
G+G KRA +I K+ S + +K+L + +P PF YE
Sbjct: 204 RGIGPKRALEMIRKYGSIEGTLKNLDKAKYPLPEPFPYE 242
>gi|148709395|gb|EDL41341.1| flap structure specific endonuclease 1, isoform CRA_b [Mus
musculus]
Length = 432
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 53 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 111
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 112 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 168
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 169 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 228
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 229 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 287
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 288 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 345
Query: 289 EDI 291
++
Sbjct: 346 VEL 348
>gi|48477300|ref|YP_023006.1| flap endonuclease-1 [Picrophilus torridus DSM 9790]
gi|73919351|sp|Q6L2I9.1|FEN_PICTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|48429948|gb|AAT42813.1| RAD-2/FEN-1 exonuclease [Picrophilus torridus DSM 9790]
Length = 338
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 126/260 (48%), Gaps = 15/260 (5%)
Query: 10 LKSIMIP--IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR-----HIDYCMHR 62
L SI+I +K+ G V+VD Y+ +++ S + + L S H+ +R
Sbjct: 5 LSSILIKHETSLKDNSGSIVSVDAYNIIYQFLSSIRGDDGEPLKDSNGNITSHLSGIFYR 64
Query: 63 VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKA 122
+ L +KP+ +FDG +K E +R+ +++N+ + E + + + +
Sbjct: 65 TSNLLENNIKPVYVFDGKPFHLKSETLRERSLIKEKNIMKLEEAIASNDDAKIRSLSSRI 124
Query: 123 VDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRI 182
I+ I +E +L + Y+ AP E +AQ +++ + V AV+++D D + FG RI
Sbjct: 125 NYITDDIVNESKTLLNLMGLPYVQAPSEGEAQASYMTLKGDVNAVVSQDYDCLLFGAKRI 184
Query: 183 IFKMDKFG--------QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ +G + + ++ N++LS G +++ L+ + IL+G D+ + G+
Sbjct: 185 LRNFTVYGRRRIAGTSRTINVNPEIIDLNENLSNLGISREQLIYIGILTGTDFNPGVKGI 244
Query: 235 GLKRAHALISKFKSYDKVIK 254
G K A +LI K+ VIK
Sbjct: 245 GAKTALSLIKKYNDIYSVIK 264
>gi|55733906|gb|AAV59413.1| putative flap endonuclease 1 [Oryza sativa Japonica Group]
Length = 380
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 26/288 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKR--ARSRKENLARAI-ECE 107
+ H+ +R L G+KP+ +FDG +K ++ KR S++E+ + + E
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRHDMYSKREDATKELTEAV 119
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
EG+ A +F ++ V ++ E ++L+ V + AP EA+A+ L ++ V AV
Sbjct: 120 EEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAV 179
Query: 168 ITEDSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ED D + FG R + MD + + EF+ + + + +L+ F +++CILS
Sbjct: 180 ASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQF-----IDLCILS 234
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
GCDY S+ G+G + A LI + S + +++++ +P P+ E
Sbjct: 235 GCDYCDSIKGIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQE 282
>gi|429854713|gb|ELA29705.1| DNA-repair protein rad2 [Colletotrichum gloeosporioides Nara gc5]
Length = 394
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKNLYQIIKE-EAPNAIKEGEIKAHFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEANENLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + +IVAP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPFIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L G ++ +++CIL GCDYL +
Sbjct: 180 MDTLTFDTP-ILLRHLTFSEQRKEPIQEVHIDKVLEGLGMEREQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + DK+++ +K
Sbjct: 239 PKVGPSTALKLIREHGTLDKLVEAIK 264
>gi|26345786|dbj|BAC36544.1| unnamed protein product [Mus musculus]
Length = 411
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 117 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|308159723|gb|EFO62244.1| Flap structure-specific endonuclease [Giardia lamblia P15]
Length = 361
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 141/300 (47%), Gaps = 22/300 (7%)
Query: 1 MGIQGLLPLLKSIM-IPIHIKELEGCC---VAVDTYSWLHKGALSCSRELCKGLPTSR-- 54
MGI+GL L++ + + + ++ C +A+D L++ + + L S
Sbjct: 1 MGIRGLAKLIEEVAPAAVSKRLIQHYCNKVIAIDASVMLYQFITTITSGDGAALANSSGE 60
Query: 55 ---HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
H+ + +V + G+KPI +FDG K + KR ++R+ + E EGN
Sbjct: 61 VTSHLVGLLAKVIRMAEAGIKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGN 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++ + ++L + YI+A EA+AQ +A + E V + D
Sbjct: 121 LERAKQLSRRTVKVTQQHCKQAERLLDVLGIPYIIAAGEAEAQCVAMAKERLCEGVASSD 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D++ FG +I + QG + + + N L GF+ L++CIL GCDY SL
Sbjct: 181 LDVLAFGSPCLIRNL---AQGGDREIMEINLNIVLKELGFSYDEFLDLCILCGCDYANSL 237
Query: 232 PGMGLKRAHALISKFKSYDKVIK----HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
G+G K A+ LI K +S ++V+ L ++ P + +A F++ + DPK
Sbjct: 238 EGIGPKTAYKLIVKHRSIEEVLAADQGKLAEKALNWP------YVRARELFKNPEIIDPK 291
>gi|357132761|ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brachypodium distachyon]
Length = 380
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 28/289 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MG++GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGVKGLTKLLAD-NAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECE 107
+ H+ +R L G+KP+ +FDG MK ++ KR R+ E L +A+E
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYAKREDATEELTKAVET- 118
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G++ A F ++ V ++ + ++L+ V + AP EA+AQ L + +V AV
Sbjct: 119 --GDTDAIERFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPCEAEAQCAALCIKDKVYAV 176
Query: 168 ITEDSDLIPFGCSRIIFK-MDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ED D + FG R + MD + + EF+ + + + + FT +++CIL
Sbjct: 177 ASEDMDSLTFGAPRFVRHLMDPSSRKIPIMEFEVAKILEELE-----FTMDQFIDLCILC 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPF--YEES 270
GCDY S+ G+G A LI + S + +++++ +P YEE+
Sbjct: 232 GCDYCDSIKGIGGLTALKLIRQHGSIEGILENINKDKYQIPEDWPYEEA 280
>gi|348560389|ref|XP_003465996.1| PREDICTED: flap endonuclease 1-like [Cavia porcellus]
Length = 380
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGEVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 VGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L T+ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQALDLTQAQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L +S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDHSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|20071071|gb|AAH27295.1| Fen1 protein [Mus musculus]
Length = 380
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + GVKP+ +FDG +K + KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGVKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 117 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|126653087|ref|XP_001388383.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
gi|317374887|sp|A3FPN7.1|FEN1_CRYPI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126117476|gb|EAZ51576.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
Length = 490
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 39/324 (12%)
Query: 1 MGIQGLLPLL-----KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCK------- 48
MGI+GL L KSI I L G VA+D W+++ L+ RE +
Sbjct: 1 MGIKGLTKFLADNAPKSIQQQ-GIGSLLGKRVAIDASMWIYQ-FLAAIREGSQWGNLTNS 58
Query: 49 -GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
G TS HI+ + R L G+KP+ +FDG MK ++ KR R++ LA + +
Sbjct: 59 SGESTS-HINGMLSRTTRLLEAGIKPVFVFDGAPPEMKKDELTKRDERREKALAELEKAQ 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
G+ + + + ++ ++ ++L + I AP EA+AQ L V V
Sbjct: 118 EIGDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCIDAPSEAEAQCAELCKDGLVYGV 177
Query: 168 ITEDSDLIPFGCSRIIFKMD--------------KFGQGVE-FQCSMLQKNKDLSFGGFT 212
+TED+D + FG I +++ K G++ + S++ D++ F
Sbjct: 178 VTEDADSLTFGTPIQIKQLNFSESSNKITDKSPSKQKNGMQIIKLSLILSELDINMDQF- 236
Query: 213 KQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFG 272
+++CILSGCDY ++ G+G A+ L+ K+ + + ++K++ + +P ++ F
Sbjct: 237 ----IDLCILSGCDYCGTIRGIGTSTAYKLLKKYHNIESILKNIDQTKNPIPGNFD--FS 290
Query: 273 KAVLTFQHQRV-YDPKTEDIVHLS 295
K F++ V + + +D++ S
Sbjct: 291 KVRELFKNPLVSKNNQIKDLIKWS 314
>gi|209879882|ref|XP_002141381.1| Flap endonuclease 1 [Cryptosporidium muris RN66]
gi|317374886|sp|B6AFP1.1|FEN1_CRYMR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|209556987|gb|EEA07032.1| Flap endonuclease 1, putative [Cryptosporidium muris RN66]
Length = 472
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 1 MGIQGLLPLL-----KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCK------- 48
MGI+GL L KSI I L G +A+D W+++ L+ RE +
Sbjct: 1 MGIKGLARFLVDNAPKSIQQQ-SIDSLIGRIIAIDASMWMYQ-FLAAIREGSQWGNLTNE 58
Query: 49 -GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
G TS HI + R L G+KP+ +FDG +K+E+ KR R++ + +
Sbjct: 59 AGESTS-HISGMLSRTIRLLEAGIKPVFVFDGEPPELKMEELMKRKERREKAQQELEKAQ 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
EG++ + + + I+ + ++ +LK + I A EA+AQ L V V
Sbjct: 118 EEGDTETIRKQLIRTIKITKEQSDDVKYMLKLLGIPVIEATSEAEAQCAELCKEGLVYGV 177
Query: 168 ITEDSDLIPFGCSRII----FKMDKFGQGVEFQCSMLQKNK---DLSFGGFTKQMLLEMC 220
TED+D + FG +I F KF + LQ K LS G + Q +++C
Sbjct: 178 ATEDADSLTFGTPLVIRHLNFSDGKFSDSKGNSKNSLQVIKLSTVLSDLGLSMQQFVDLC 237
Query: 221 ILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
IL GCDY ++ G+G A+ L+ K K + +I L + +P ++
Sbjct: 238 ILCGCDYCGTIRGIGALTAYKLLKKHKDIETIINELDKNKHPLPMSFD 285
>gi|148709394|gb|EDL41340.1| flap structure specific endonuclease 1, isoform CRA_a [Mus
musculus]
Length = 396
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 17 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 75
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 76 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 132
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 133 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 192
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 193 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 251
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 252 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 309
Query: 289 EDI 291
++
Sbjct: 310 VEL 312
>gi|83286314|ref|XP_730108.1| Flap endonuclease-1 [Plasmodium yoelii yoelii 17XNL]
gi|74882336|sp|Q7RME3.1|FEN1_PLAYO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|23489735|gb|EAA21673.1| flap endonuclease-1-related [Plasmodium yoelii yoelii]
Length = 480
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 30/293 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSC------SRELCKGL 50
MGI+GL + + + I I+ L G VA+D L++ ++ + +
Sbjct: 1 MGIKGLTKFIADTAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDGDQYGNLMNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ I+ ++EG
Sbjct: 61 ETTSHISGLMSRTIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLIKAKAEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + I +P EA+AQ FL + A TE
Sbjct: 121 NLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQG---------------VEFQCSMLQKNKDLSFGGFTKQM 215
D+D + FG +I ++ E + K L+ F
Sbjct: 181 DADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEF---- 236
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
++ CIL GCDY ++ G+G K A+ LI ++ + +IK++ + VP ++
Sbjct: 237 -IDFCILCGCDYCDTIKGIGSKTAYNLIKEYNCIENIIKNIDQNKYQVPANFK 288
>gi|301781710|ref|XP_002926265.1| PREDICTED: flap endonuclease 1-like [Ailuropoda melanoleuca]
gi|281345366|gb|EFB20950.1| hypothetical protein PANDA_015901 [Ailuropoda melanoleuca]
Length = 380
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRGERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L V Y+ AP EA+A L + +V A
Sbjct: 117 AGVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|389737981|gb|EIM79187.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 325
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 18/303 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG++G ++ + I L G +A+D +H+ + S + T + ++ M
Sbjct: 1 MGVEGFWCAVQHTAHSVQISSLRGKRLAIDMSVLMHRALSTDSENMANNRYTPKPTEFVM 60
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE----SEGNSSASY 116
+ + G+ P +FDG LP K +R K+NL RA E +EG S+
Sbjct: 61 QTIGSMLACGITPYAVFDGRPLPAKAPTHLRR----KDNLERATESLKDKIAEG-CKISH 115
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
Y+ + ++ E+I+ LK+ +VS +V+ YEADAQ+ +L + V+ +ITED D+
Sbjct: 116 SDYRAVLCVTSEFTKEVIERLKKIDVSLVVSAYEADAQLVWLELHDIVDGLITEDGDVFA 175
Query: 177 FGCSRI--IFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+G S + ++ + + + G ++ +L+GCDY +PG+
Sbjct: 176 YGASTVYRLWSARDTRVNRYMRQDFVSATNQFTLDG-ANVSFVDTWMLAGCDYGTKIPGV 234
Query: 235 GLKRAHALIS--KFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
G K A + F S +++ + S Y L + H V+D + E++V
Sbjct: 235 GWKTALKALQGCSFASAVEILISDRAEGES----YMRLAATVRLIYAHHCVWDVEQEEMV 290
Query: 293 HLS 295
L+
Sbjct: 291 CLT 293
>gi|281202271|gb|EFA76476.1| 5'3'-exonuclease N- and I-domain-containing protein
[Polysphondylium pallidum PN500]
Length = 670
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 186 MDKFGQGVEFQCSMLQ--KNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALI 243
MDK G E + L K KD F ML MCILSGCDYL SL GMGLK A+ +
Sbjct: 1 MDKEGYCEEIKTEDLATCKGKDYDLADFNLTMLRHMCILSGCDYLPSLTGMGLKTAYKYL 60
Query: 244 SKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGN 303
K + +K+ K L+ + Y E F KA LTF+HQRV+DP ++VH S I
Sbjct: 61 KKHRDIEKIFKVLRMEK-GMHTNYIEQFYKADLTFRHQRVFDPCLRELVHFSPIDKEKTY 119
Query: 304 D---LDFL--------AKGIAIGDLDPFTQLPFQE 327
+ +DFL A+ IA G +DP ++ F E
Sbjct: 120 NFESIDFLGEFIENEIAEKIAKGIIDPNSKQSFDE 154
>gi|340966641|gb|EGS22148.1| hypothetical protein CTHT_0016650 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 395
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L L+K P+ I+E E G VA+D YS+L + +
Sbjct: 1 MGIKHLFQLIKE-EAPLSIREGEIKQHFGRKVAIDASMSIYSFLIAVRSDGQQLMNDAGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDAGIKPLYVFDGKPPKLKSGELAKRFQRKQEAQEDLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFNTP-ILLRHLTFAEQRKEPIQEIHTDKVLEGLNMDRKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ ++
Sbjct: 239 PKIGPSTALKLIREHGSLEKVVEFIQ 264
>gi|348688657|gb|EGZ28471.1| hypothetical protein PHYSODRAFT_294028 [Phytophthora sojae]
Length = 390
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 22/283 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE------GCCVAVDTYSWLHKGALSCSRELCKGLPT-- 52
MGI+GL+ LL+ P IKE+E G VA+D L++ ++ R G P+
Sbjct: 1 MGIKGLMKLLQE-EAPSCIKEVEKMSALAGHAVAIDASMALYQFLIAI-RSADGGGPSQA 58
Query: 53 --------SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI 104
+ H+ R + G+KP+ +FDG MK + KR+ R+E
Sbjct: 59 LTNADGEVTSHLQGMFSRTIRMMENGLKPVYVFDGKPPVMKSGELAKRSDRRQEAQKALE 118
Query: 105 ECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQV 164
E +GN+ F ++ V +P + ++L+ V +I AP EA+A LA +V
Sbjct: 119 EATEKGNAEDIDRFNKRLVRATPQHNEDCKELLRLMGVPHITAPCEAEASCAELAKGGRV 178
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
A TED D + FG ++++ + ++ + L T++ +++CIL G
Sbjct: 179 YAAGTEDMDALTFGVP-VLYRRLTVSPAKKIPILEIRLERALQELELTQEQFVDLCILCG 237
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHL---KYSTVSVP 264
CDY S+ G+G K+A A I + K+ + ++ L K V +P
Sbjct: 238 CDYCDSIRGVGPKKAFAGIKEHKNIENFLEALQKNKSKGVVIP 280
>gi|46048490|ref|NP_032025.2| flap endonuclease 1 [Mus musculus]
gi|410025484|ref|NP_001258543.1| flap endonuclease 1 [Mus musculus]
gi|410025486|ref|NP_001258544.1| flap endonuclease 1 [Mus musculus]
gi|16307328|gb|AAH10203.1| Flap structure specific endonuclease 1 [Mus musculus]
gi|26337949|dbj|BAC32660.1| unnamed protein product [Mus musculus]
gi|26347483|dbj|BAC37390.1| unnamed protein product [Mus musculus]
gi|53791234|dbj|BAD52443.1| flap endonuclease 1 [Mus musculus]
gi|74145457|dbj|BAE36169.1| unnamed protein product [Mus musculus]
gi|74150381|dbj|BAE32236.1| unnamed protein product [Mus musculus]
gi|74185061|dbj|BAE39135.1| unnamed protein product [Mus musculus]
gi|148709396|gb|EDL41342.1| flap structure specific endonuclease 1, isoform CRA_c [Mus
musculus]
Length = 380
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 117 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|351699147|gb|EHB02066.1| Flap endonuclease 1 [Heterocephalus glaber]
Length = 380
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 143/303 (47%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G + E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGETLQSEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + +G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMEHGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L T++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEARKLPIQEFHLSRILQALNLTQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|367031946|ref|XP_003665256.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
gi|347012527|gb|AEO60011.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
Length = 395
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE + G VA+D YS+L + + +
Sbjct: 1 MGIKQLFSIIKE-EAPDAIKEGDIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + +R + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
S +F ++ V ++ E ++LK V YIVAP EA+AQ LA + +V A +ED
Sbjct: 120 SEDVEKFSRRTVRVTKEHNAECQRLLKLMGVPYIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFDAP-ILLRHLTFSEQRKEPIQEIHVSKVLEGLNMDRKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ +K
Sbjct: 239 PKVGPSTALKLIREHGSLEKVVEFMK 264
>gi|254168936|ref|ZP_04875776.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|197622200|gb|EDY34775.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
Length = 339
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 21/268 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I+IKEL+G ++VD Y+ L++ LS R+ G P + H+ ++R
Sbjct: 14 INIKELKGKIISVDAYNALYQ-FLSIIRQ-PDGTPLRDHAGRVTSHLSGLLYRTANFLAE 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG +K+ +R + R E + EGN + Q+A ++ ++
Sbjct: 72 GIKPVYVFDGRPPELKMRTIGERIKIRMEAKEAWEKALKEGNLEEARSKAQQATFLTKNM 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E ++L + ++ AP E +AQ ++A A ++D D + FG ++ +
Sbjct: 132 VDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDFDSLLFGAPNLVRNLAIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + ++ ++L G +++ L+++ IL G DY + + G+G K A
Sbjct: 192 GKRKLPRKNVYVDVKPEIILLEENLKNLGISREQLVDIGILVGTDYNEGIKGVGPKTALK 251
Query: 242 LISKFKSYDKVIKHLKYSTVSVPPFYEE 269
LI K+ S +K+I+ Y+ P Y+E
Sbjct: 252 LIKKYGSLEKIIQERGYTI----PHYKE 275
>gi|336259381|ref|XP_003344492.1| hypothetical protein SMAC_08742 [Sordaria macrospora k-hell]
gi|317376194|sp|D1ZT73.1|FEN1_SORMK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|380087456|emb|CCC05373.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 394
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE + G VA+D YS+L + + +
Sbjct: 1 MGIKQLFSIIKD-EAPAAIKEGDIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNEAGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YIVAP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L G ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFHTP-ILLRHLTFSEQRKEPIQEIHTDKVLEGLGMDRKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + ++V++ +K
Sbjct: 239 PKVGPSTALKLIREHGTLEEVVEWMK 264
>gi|357441985|ref|XP_003591270.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480318|gb|AES61521.1| Flap endonuclease 1a [Medicago truncatula]
Length = 384
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ R L G+KP+ +FDG MK ++ KR R E A E
Sbjct: 60 EVTSHLQGMFARTIRLLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEAD 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N +F ++ V ++ + ++L+ V + AP EA+AQ L + +V AV +E
Sbjct: 120 NKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG + + MD + + EF + + + DL+ F +++CILSGCD
Sbjct: 180 DMDSLTFGAPKFLRHLMDPSSKKIPVMEFDVAKILEELDLTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
Y ++ G+G A LI + S +K+++++ VP P+ E
Sbjct: 235 YCDNIRGIGGMTALKLIRQHGSIEKILENISKERYQVPDDWPYQE 279
>gi|452840124|gb|EME42062.1| hypothetical protein DOTSEDRAFT_174868 [Dothistroma septosporum
NZE10]
Length = 393
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 11/274 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKNLAQVIKD-NCPDAIKEGEIKNQFGRKVAIDASMSLYSFLVAVRSNGEQLMSDTGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E A E + G
Sbjct: 60 TTSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQADHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V +I+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S ++ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 180 MDTLTFD-SPVLLRHLTFSEQRKEPIQEIFLDRVLEGLEMDQKQFIDLCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP 265
G+G K A LI K K+ + V++ +K + P
Sbjct: 239 KGIGPKVALELIKKHKTLENVVEEIKKGSKYTLP 272
>gi|254166886|ref|ZP_04873740.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289596167|ref|YP_003482863.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
gi|197624496|gb|EDY37057.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289533954|gb|ADD08301.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
Length = 339
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 21/268 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I+IKEL+G ++VD Y+ L++ LS R+ G P + H+ ++R
Sbjct: 14 INIKELKGKIISVDAYNALYQ-FLSIIRQ-PDGTPLRDHAGRVTSHLSGLLYRTANFLAE 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG +K+ +R + R E + EGN + Q+A ++ +
Sbjct: 72 GIKPVYVFDGRPPELKMRTIGERIKIRMEAKEAWEKALKEGNLEEARSKAQQATFLTKDM 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E ++L + ++ AP E +AQ ++A A ++D D + FG ++ +
Sbjct: 132 VDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDFDSLLFGAPNLVRNLAIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + ++ ++L G +++ L+++ IL G DY + + G+G K A
Sbjct: 192 GKRKLPRKNVYVDVKPEIILLEENLKNLGISREQLVDIGILVGTDYNEGIKGVGPKTALK 251
Query: 242 LISKFKSYDKVIKHLKYSTVSVPPFYEE 269
LI K+ S +K+I+ Y+ P Y+E
Sbjct: 252 LIKKYGSLEKIIQERGYTI----PHYKE 275
>gi|312082398|ref|XP_003143428.1| flap endonuclease-1 [Loa loa]
gi|307761410|gb|EFO20644.1| flap endonuclease-1 [Loa loa]
Length = 345
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 20/305 (6%)
Query: 17 IHIKELEGCC---VAVDTYSWLHKGALSC----SRELCKGLPTSRHIDYCMHRVNLLRHY 69
I +KE +G VAVD L++ ++ S+ + T+ H+ +R +
Sbjct: 18 IRLKEFKGYFGRKVAVDASMCLYQFLIAVRQDGSQLQTESGETTSHLLGMFYRTIRMIDN 77
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK + KR R E + + G+ ++ +F ++ V ++
Sbjct: 78 GIKPVYVFDGKPPQMKTSELEKRIERRAEAEKQRSDAVELGDEASVNKFARRLVKVTKEQ 137
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E +++ + + AP EA+AQ LA + +V A ++ED D + FG S I+ +
Sbjct: 138 NEEAKRLVTLMGIPVLDAPCEAEAQCAALARAGKVFATVSEDMDALTFG-SPILLRQMIA 196
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSY 249
+ + + N+ L G + +++CIL GCDY+ ++ G+G K+A LI K +
Sbjct: 197 SEAKKLPVKEMNLNQVLKDFGMNMEQFIDLCILLGCDYVSTIRGIGPKKAFELIKKHECI 256
Query: 250 DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD----------PKTEDIVHLSCISD 299
+ V+K + + ++P ++ + +A F V D P E IV C
Sbjct: 257 ENVLKIIDQTKYAIPKNWQ--YKEARRLFLEPDVMDCENVELVWKEPDVEGIVQFLCGEK 314
Query: 300 NIGND 304
+ D
Sbjct: 315 SFNED 319
>gi|71031676|ref|XP_765480.1| flap endonuclease 1 [Theileria parva strain Muguga]
gi|122052062|sp|Q4N3S6.1|FEN1_THEPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|68352436|gb|EAN33197.1| flap endonuclease 1, putative [Theileria parva]
Length = 494
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 43/278 (15%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCV-----AVDTYSWLHKGALSC-------SRELCK 48
MGI+GL+P L S +P I EL + A+D + L++ ++ S K
Sbjct: 1 MGIKGLIPFL-SEKVPSSISELSLESLSGESLAIDASAALYQFTIAIRDSSYFSSLVNSK 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
G TS HI M+R + YG+KP+ +FD +K + KR + R+E A + S
Sbjct: 60 GESTS-HIYGLMNRCSKFLEYGIKPVFVFDSKPPELKTKTLEKRRQQREEANASLKKAIS 118
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
EG+ + + + V +S + ++L+ V I A EA+AQ +L V
Sbjct: 119 EGDKESVKKLVGRTVKVSKEMNESAKKLLRLMGVPVIEALEEAEAQCAYLVTKNLCRFVA 178
Query: 169 TEDSDLIPFG-----------CSRIIFKMD--KFGQGVEFQCSMLQKNKDLSFGGFTKQM 215
+ED+D + FG S+ I K+D K G+EF +F F
Sbjct: 179 SEDTDTLVFGGAFLLRNVASSSSKKILKVDLQKVLDGLEF-----------NFDQF---- 223
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVI 253
++ CIL GCDY +L G+G K A++L+ K+++ ++++
Sbjct: 224 -IDFCILCGCDYCDTLEGVGPKTAYSLVKKYQNLEEIV 260
>gi|392566068|gb|EIW59244.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 406
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 10/265 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL +K L G VAVD +++ ++ ++ + L
Sbjct: 1 MGIKGLTALLAEHAPKAFQEHEMKTLFGRKVAVDASMSIYQFLIAVRQKDGELLTNDAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 61 TTSHLMGFFYRTIRMVENGIKPAYVFDGKPPELKSGVLSKRFEKREEAKEDNEEAKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++L + ++VAP EA+AQ LA +V A +ED
Sbjct: 121 AEDMDRFSRRTVKVTREHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG I+++ F + + S + K L E+CIL GCDYL+ +
Sbjct: 181 MDTLTFGAP-ILYRHLTFSEARKTPISEINLQKALEGLEMNMSQFTELCILLGCDYLEPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL 256
G+G K A LI + S K+++HL
Sbjct: 240 KGVGPKSALKLIREHGSLGKILEHL 264
>gi|307102466|gb|EFN50740.1| hypothetical protein CHLNCDRAFT_37697 [Chlorella variabilis]
Length = 389
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 151/327 (46%), Gaps = 30/327 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLPT--- 52
MGIQGL LL P +KE + G +AVD ++ + R+ + L +
Sbjct: 1 MGIQGLTKLLGDAA-PGCMKEQKFENYFGRKIAVDASMHIYAFLVVVGRQGDQMLTSETG 59
Query: 53 --SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE- 109
+ H+ R + G+KP+ +F+G +K E+ KR+ +R+E+ +E E
Sbjct: 60 EVTSHLQGMFFRTVRMLEAGMKPVFVFEGKAPELKREELAKRS-NRREDANTELEAAKEA 118
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
GN+ ++ ++ V ++ E ++L+ V + AP EA+AQ L V + T
Sbjct: 119 GNAEDVEKYSKRTVRVTREHNEECKRLLRLMGVPVLEAPSEAEAQCAQLCKDGLVYGIST 178
Query: 170 EDSDLIPFGCSRIIFKM----DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGC 225
ED D + FG ++I + + +EF ++ K +L T+ +++CIL GC
Sbjct: 179 EDMDSLTFGTPKLIRHLMAPSSQKPLAMEFDHELVLKELEL-----TEDQFIDLCILCGC 233
Query: 226 DYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF-YEESFGKAVLTFQHQRV 283
DY + G+G RA +LI K S + V+ L +P PF Y+E A F+ V
Sbjct: 234 DYTAKISGIGAVRALSLIKKHGSIEGVLAALDSKKYQIPEPFPYQE----ARRLFKEPDV 289
Query: 284 YDPKTEDIVHLSCISDNIGNDLDFLAK 310
K + I L S + +DFL K
Sbjct: 290 V--KGDQIPQLKWTSPDTEGLIDFLVK 314
>gi|145349446|ref|XP_001419144.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|317374919|sp|A4S1G4.1|FEN1_OSTLU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|144579375|gb|ABO97437.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 389
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 29/326 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE--LEGCC---VAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL L++ P IKE E VA+D +++ + R+ + L
Sbjct: 1 MGIKGLTALMRD-NAPGAIKEQKFESYLDRRVAIDASMHIYQFMMVVGRQGEQQLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ ++R + G+KPI +FDG MK + KR R+E A G
Sbjct: 60 EVTSHLQGMLNRTCRMLEAGIKPIYVFDGKPPVMKGGELAKRKDKREEAEAALKAAREAG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + ++ V +S + E++++ V AP EA+A + + V AV TE
Sbjct: 120 NQEEVEKLSKRTVRVSKQHSQEVMKLASLLGVPVFEAPCEAEASCAAMCKAGLVWAVATE 179
Query: 171 DSDLIPFGCSRIIFKM------DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
D D + F R+ + DK +EF +K L+ G T + ++MCIL G
Sbjct: 180 DMDTLTFAAPRLARNLMAPKSQDK--PVLEFDY-----DKVLAGLGLTPEQFIDMCILCG 232
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY 284
CDY ++ G+G K A LI + S +K+++ + T PP + F A F++ V
Sbjct: 233 CDYCDTIRGIGPKTALKLIKEHGSIEKILEEI--DTEKYPPPQDWDFAGARELFKNPEVM 290
Query: 285 DPKTEDIVHLSCISDNIGNDLDFLAK 310
D + LS + N +DFL K
Sbjct: 291 DTTG---IALSWKAPNEEGLIDFLVK 313
>gi|432089490|gb|ELK23431.1| Flap endonuclease 1 [Myotis davidii]
Length = 380
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 29/318 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMIENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLHQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD--- 285
+S+ G+G KRA LI K KS +++++ L + VP + +A F V D
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLAPEVLDPEA 293
Query: 286 -------PKTEDIVHLSC 296
PK E++V C
Sbjct: 294 VELKWSEPKEEELVKFMC 311
>gi|357117977|ref|XP_003560737.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 220
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID 57
MGI LL +K + P+HIK+ G V +D Y+WLHKGA SCS ELC K R+I
Sbjct: 1 MGIPNLLRFMKPFIEPVHIKKYTGQRVGIDAYTWLHKGAYSCSMELCLDPKSGGARRYIS 60
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKR 92
Y MH +NLLRH+ V P+++FDG +P K + R
Sbjct: 61 YFMHHINLLRHHKVVPVVVFDGCSMPCKSATDKDR 95
>gi|146171182|ref|XP_001470841.1| flap endonuclease-1 [Tetrahymena thermophila]
gi|317376196|sp|A4VDN2.1|FEN1_TETTS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146145019|gb|EDK31639.1| flap endonuclease-1 [Tetrahymena thermophila SB210]
Length = 384
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 16/243 (6%)
Query: 55 HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA 114
H+ ++R +L G+KP+ +FDG K + +R +++ E + G+
Sbjct: 67 HLVGLLNRTVMLIENGLKPVWVFDGKPPQFKSGELARRQKAKDEAAEKQKTAIETGDMQE 126
Query: 115 SYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDL 174
+ + Q+ + I+ + + I++L+ V I+AP EA+AQ LA +K+V A +TED D
Sbjct: 127 ALKQEQRNLHITKEMKADAIKLLQLVGVPVILAPCEAEAQCAALAKAKKVFATVTEDMDA 186
Query: 175 IPFGCSRIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPG 233
+ F ++ ++ + + E + + LS F +++CIL GCDYL + G
Sbjct: 187 LTFATPFLLRNLNSKKEPITEINYEKMLQELKLSHNEF-----VDLCILCGCDYLGRIEG 241
Query: 234 MGLKRAHALISKFKSYDKVIKHL--------KYSTVSVPPFYEESFGKAVLTFQHQRVYD 285
+G A LI++ KS +KV++H+ K +VP Y+ + A F + V D
Sbjct: 242 VGPVNAFKLITEHKSLEKVLEHMEEVNKQSTKKQKYTVPSSYD--YVSARDLFINPEVTD 299
Query: 286 PKT 288
P+T
Sbjct: 300 PET 302
>gi|21227008|ref|NP_632930.1| flap endonuclease-1 [Methanosarcina mazei Go1]
gi|28380015|sp|Q8PYF6.1|FEN_METMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|20905326|gb|AAM30602.1| FLAP endonuclease-1 [Methanosarcina mazei Go1]
Length = 338
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 19/304 (6%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I + +L VAVD ++ LH+ LS R+ +G TS H+ ++R L
Sbjct: 14 IELSDLSNRVVAVDAFNTLHQ-FLSIIRQRDGSPLVNSQGKVTS-HLSGLLYRTASLVEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK N+R R+ + + ++EGN A+Y++ Q + + I
Sbjct: 72 GIKPVFVFDGKPPEMKTGTLNRRKEIRESSKEKWENAKAEGNLEAAYKYAQASSKVDQDI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ +L + +I AP E +AQ + + K + V ++D D FG ++ +
Sbjct: 132 IEDSKYLLDIMGIPWIQAPCEGEAQAAHMVLKKDADCVASQDYDSFLFGAPTVVRNLAAT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + M++ + L G + L+++ I G DY + L +G K A
Sbjct: 192 GKRKLPGKNVYVDVELEMIELEETLDSLGINRDQLIDIAICVGTDYNKGLEKVGPKTALK 251
Query: 242 LISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD-PKTEDIVHLSCISDN 300
LI K + VI+ K + +E F +T ++ + P +E +++ C ++
Sbjct: 252 LIKKHGNIHAVIRE-KGMEIEALDSIKELFTHPDVTDDYEIKWGKPDSEKLINFLCDEND 310
Query: 301 IGND 304
D
Sbjct: 311 FSED 314
>gi|354503001|ref|XP_003513570.1| PREDICTED: flap endonuclease 1-like [Cricetulus griseus]
Length = 380
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|452981413|gb|EME81173.1| hypothetical protein MYCFIDRAFT_189405 [Pseudocercospora fijiensis
CIRAD86]
Length = 393
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 19/320 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKNLYQVIKE-NCPDAIKEGEIKNQFGRKVAIDASMSLYSFLVAVRSGGEQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E + + G
Sbjct: 60 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKSEAQEAHEDAKEIGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI+AP EA+AQ +A + +V A +ED
Sbjct: 120 AEEVEKFSRRTVRVTREHNQEAQRLLKLMGVPYIIAPTEAEAQCAVIARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S ++ + F + + + ++ L + +++CIL GCDYL +
Sbjct: 180 MDTLTF-ASPVLLRKLTFSEQRKEPIQEIHLDRVLEGLDMDQNQFIDLCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL-KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
G+G K A ALI + K+ + V+ + K ++P + + A + FQ +P
Sbjct: 239 KGIGPKNALALIKEHKNLEGVVAMIEKTGKYTLPEDW--PYQDARVLFQ-----EPDVRQ 291
Query: 291 IVHLSCISDNIGNDLDFLAK 310
H C D+D L K
Sbjct: 292 ADHPECDFKWENPDVDGLVK 311
>gi|389637772|ref|XP_003716519.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
gi|317374924|sp|A4QS18.2|FEN1_MAGO7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|351642338|gb|EHA50200.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
Length = 394
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 20/282 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELC--KG 49
MGI+ L ++K P IK E G VA+D YS+L A+ + E+ +
Sbjct: 1 MGIKQLFTIIKE-NAPAAIKTGEIKNQFGRKVAIDASMSIYSFLI--AVRSNGEMLTNED 57
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + +R + ++E L E
Sbjct: 58 GQTTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYQRKQEALEGLEEARET 117
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + +F ++ V ++ E Q+LK + YI+AP EA+AQ LA + +V A +
Sbjct: 118 GTAEDVEKFSRRTVRVTREHNEECRQLLKLMGIPYIIAPTEAEAQCAVLARAGKVFAAAS 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + F S I+ + F + + + +K L ++ +++CIL GCDYL
Sbjct: 178 EDMDTLCFD-SPILLRHLTFSEARKEPIQEIHVDKVLEGLDMDRKQFVDLCILLGCDYLD 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIK-----HLKYSTVSVPPF 266
+P +G A LI + S + +++ LKY+ PF
Sbjct: 237 PIPKVGPSTALKLIREHGSLETIVEKMKKGELKYTVPEDWPF 278
>gi|395852526|ref|XP_003798789.1| PREDICTED: flap endonuclease 1 [Otolemur garnettii]
Length = 380
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGEVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ IFDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + N+ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLNRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + +P + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPIPENWLHK--EAHQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|346976080|gb|EGY19532.1| DNA-repair protein rad2 [Verticillium dahliae VdLs.17]
Length = 394
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L +LK P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKNLFQILKE-EAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEAKEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V +I+AP EA+AQ LA +V A +ED
Sbjct: 120 AEDIEKFSRRTVRVTREHNAECQKLLKLMGVPFIIAPTEAEAQCAVLAKGGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + + + + + +K + G + +++CIL GCDYL +
Sbjct: 180 MDTLTFETP-ILLRHLTYSEQRKEPIQEIHLDKVMEGLGMERNQFVDLCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + K+ + V+ ++K
Sbjct: 239 PKVGPSTALKLIREHKTLEGVVDYIK 264
>gi|357122637|ref|XP_003563021.1| PREDICTED: flap endonuclease 1-B-like [Brachypodium distachyon]
Length = 413
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 24/272 (8%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL +++ G +A+D +++ + R+ + L
Sbjct: 1 MGIKGLTKLLAEHAPRAAAQRRVEDYRGRVIAIDASLSIYQFLVVVGRKGTEVLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSR---KENLARAIECES 108
+ H+ ++R L G+KP+ +FDG +K + KR+ R E+L RAIE
Sbjct: 61 VTSHLQGMLNRTVRLLEAGIKPVFVFDGEPPDLKKRELAKRSLRRDDASEDLNRAIEV-- 118
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G+ + +F ++ V I+ + ++L+ V + AP EA+AQ L + + AV
Sbjct: 119 -GDEDSIEKFSKRTVKITKKHNDDCKKLLRLMGVPVVEAPGEAEAQCASLCKNHKAYAVA 177
Query: 169 TEDSDLIPFGCSRIIFKMD----KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
+ED D + FG R + + K EF+ K L G T +++CILSG
Sbjct: 178 SEDMDSLTFGSLRFLRHITDLSFKRSPVTEFEVP-----KVLEELGLTMDQFIDLCILSG 232
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
CDY +++ G+G +RA LI + ++V+++L
Sbjct: 233 CDYCENIKGIGGQRALKLIRQHGCIEEVVQNL 264
>gi|339253602|ref|XP_003372024.1| flap endonuclease 1a [Trichinella spiralis]
gi|316967624|gb|EFV52031.1| flap endonuclease 1a [Trichinella spiralis]
Length = 381
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 21/287 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-----LEGCCVAVDTYSWLHKGALSC----SRELCKGLP 51
MGI+GL ++ P I E G +A+D L++ ++ S+ +
Sbjct: 1 MGIKGLSKVIADFS-PNAITERTMNSFFGRTIAIDASMSLYQFLIAIRQDGSQLSAESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQE----------NKRARSRKENLA 101
T+ H+ +R + G+KP+ +FDG +K ++ +KR R E
Sbjct: 60 TTSHLIGMFYRTIRMVENGIKPVYVFDGKPPVLKSDEVHFLICTFVSLDKRTERRTEAEE 119
Query: 102 RAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVS 161
+ + G+S A +F ++ +S E ++LK + YI AP EA+AQ L +
Sbjct: 120 KYADAVQAGDSEAINKFSRRLTKVSKEHVDECKRLLKLMGIPYIEAPCEAEAQCAALVKA 179
Query: 162 KQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
K+V A TED D + FG S I+ + F + + + + L T + ++ CI
Sbjct: 180 KKVFAAATEDMDTLTFG-SDIMLRYLTFSEAKKMPIKEFRFDDVLHGLNMTHEEFVDFCI 238
Query: 222 LSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
L GCDY ++ G+G K+A+ LI ++++ + +++ L +P ++
Sbjct: 239 LLGCDYCPTIKGVGPKKAYDLIKQYRNLEVIVEKLDKKKYPIPENWQ 285
>gi|159475218|ref|XP_001695720.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
gi|317374883|sp|A8J2Z9.1|FEN1_CHLRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158275731|gb|EDP01507.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
Length = 396
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 17/279 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-----LEGCCVAVDTYSWLHKGALSCSRELCKGLPT--- 52
MGI GL LL P IKE L G VAVD +++ + R+ + L
Sbjct: 1 MGIHGLTKLLGD-NAPGCIKETKFENLFGRKVAVDASMHIYQFMVVVGRQGDQLLTNEAG 59
Query: 53 --SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE- 109
+ H+ R + G+KP+ +FDG +K +Q +R R+ + A+E E
Sbjct: 60 EITSHLQGMFFRTAKMLEAGIKPVYVFDGKPPQLKQDQLAQRT-ERRADANEALEKAKEA 118
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G+ A ++ +++V ++ E ++L+ V + AP EA+AQ +A S V + T
Sbjct: 119 GDQEAIEKYSKRSVRVTREHNDECKRLLRLMGVPVVEAPTEAEAQCAEMAKSGLVYGLAT 178
Query: 170 EDSDLIPFGCSRIIFK-MDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
ED D + FG R+I M Q V Q + L T +++CIL GCDY
Sbjct: 179 EDMDALTFGAPRVIRHLMAPSSQNVPVQ--EFDREVALRELELTDDQFIDLCILMGCDYC 236
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF 266
++ G+G RA +I K S + ++K L + VP PF
Sbjct: 237 GTIRGIGAVRALQMIKKHGSIEGMLKELDPAKYPVPEPF 275
>gi|57099749|ref|XP_533271.1| PREDICTED: flap endonuclease 1 isoform 1 [Canis lupus familiaris]
Length = 380
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + N+ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLNRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|291409580|ref|XP_002721064.1| PREDICTED: flap structure-specific endonuclease 1 [Oryctolagus
cuniculus]
Length = 380
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGEVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S +VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYAVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|124505315|ref|XP_001351399.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
gi|74876406|sp|Q7K734.1|FEN1_PLAF7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|11559508|gb|AAG37989.1|AF093702_1 flap endonuclease 1 [Plasmodium falciparum]
gi|6562723|emb|CAB62862.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
Length = 672
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 34/316 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL------ 50
MGI+GL + + + I I+ L G +A+D L++ ++ G
Sbjct: 1 MGIKGLTKFIADAAPNAIKEIKIESLMGRIIAIDASMSLYQFIIAIRDSEQYGNLTNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ + + EG
Sbjct: 61 ETTSHISGLMSRSIRLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + I AP EA++Q FL A TE
Sbjct: 121 NLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQG---------------VEFQCSMLQKNKDLSFGGFTKQM 215
D+D + FG +I ++ E + K +L+ F
Sbjct: 181 DADALVFGTKILIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEF---- 236
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAV 275
++ CIL GCDY ++ G+G K A+ LI ++ +K+I+++ + VP + F +A
Sbjct: 237 -IDFCILCGCDYCDTIKGIGSKTAYNLIKEYNCIEKIIENIDQNKYQVPSNF--RFQEAR 293
Query: 276 LTFQHQRVYDPKTEDI 291
+F + V PK EDI
Sbjct: 294 KSFINPNVL-PK-EDI 307
>gi|401413646|ref|XP_003886270.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
gi|325120690|emb|CBZ56245.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
Length = 545
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 149/335 (44%), Gaps = 43/335 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLPT--- 52
MGI+GL + P IK E G +A+D L++ ++ G T
Sbjct: 1 MGIRGLGKFVGDFA-PRAIKRQEVGSFTGRVIAIDASMSLYQFMVAIRDGNSFGNFTNDA 59
Query: 53 ---SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
+ HI ++R L G++P+ +FDG +K + KR R+ A + E
Sbjct: 60 GDCTSHIAGMLNRAIRLLEQGIRPVYVFDGKPPELKSGELAKRREVRESAQVAAEKAREE 119
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
GN+ + ++V +S ++ ++L+ + + AP EA+AQ L K+V A T
Sbjct: 120 GNAEELRKQIVRSVRVSQQHNDDIKRLLRLMGLPVVEAPCEAEAQCAELTKHKKVWATAT 179
Query: 170 EDSDLIPFGCSRIIFKM---DKFGQGVEFQC-------SMLQKNKDLSFGGFTKQMLLEM 219
ED+D + FG +R+I + ++ G ++L++ K F+++ ++
Sbjct: 180 EDADALTFGATRLIRNLTFSERTGSSASASAILVIDLPTLLEELK------FSQEQFIDF 233
Query: 220 CILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQ 279
CIL GCDY +L G+G K A+ LI + S +K+++ V P E+F FQ
Sbjct: 234 CILCGCDYCGTLKGVGAKTAYGLIREHGSVEKILE------VVDPQKIPEAF-----CFQ 282
Query: 280 HQRVY----DPKTEDIVHLSCISDNIGNDLDFLAK 310
R + D D + L+ ++ FL K
Sbjct: 283 EARAFFRNPDVTPADQIQLTWGEVDVEGLKTFLVK 317
>gi|325186427|emb|CCA20932.1| flap endonuclease 1 putative [Albugo laibachii Nc14]
Length = 389
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 24/290 (8%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHK---------GALSCSRELC 47
MGI+GL+ LL+ S + + + L G +A+D L++ GA
Sbjct: 1 MGIKGLMKLLQEEAPSCIREVQMSHLAGRSIAIDASMALYQFLIAIRSNDGAGPAQALTN 60
Query: 48 KGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
+ + H+ R L G+KP+ +FDG MK ++ KR + R+ +++E
Sbjct: 61 QDGEDTSHLQGMFSRTIRLMENGIKPVYVFDGKPPVMKSKELEKR-KDRRTAANKSLEEA 119
Query: 108 SE-GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
+E GN F ++ V + + + ++L+ V + AP EA+A LA +V A
Sbjct: 120 TEAGNLVEIDRFSKRLVHATSQHSQDCKELLRLMGVPVLTAPCEAEATCATLAKHHKVYA 179
Query: 167 VITEDSDLIPFGC----SRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCIL 222
TED D++ FG R+ +K +E + K DL T+Q +++CIL
Sbjct: 180 SGTEDMDVLTFGTPVLYRRMTVAANKKVPILEIKLEQALKALDL-----TEQQFVDLCIL 234
Query: 223 SGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFG 272
GCDY S+ G+G K+A I + K+ + ++HL+ S EE G
Sbjct: 235 CGCDYCDSIRGIGPKKAFNGIKEHKTIENFLQHLQQSNNKGVVIPEEWLG 284
>gi|74824687|sp|Q9GZ01.1|FEN1_PLAFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|9885425|gb|AAG01445.1| flap endonuclease-1 [Plasmodium falciparum]
Length = 650
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 34/316 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL------ 50
MGI+GL + + + I I+ L G +A+D L++ ++ G
Sbjct: 1 MGIKGLTKFIADAAPNAIKEIKIESLMGRIIAIDASMSLYQFIIAIRDSEQYGNLTNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ + + EG
Sbjct: 61 ETTSHISGLMSRSIRLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + I AP EA++Q FL A TE
Sbjct: 121 NLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQG---------------VEFQCSMLQKNKDLSFGGFTKQM 215
D+D + FG +I ++ E + K +L+ F
Sbjct: 181 DADALVFGTKILIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEF---- 236
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAV 275
++ CIL GCDY ++ G+G K A+ LI ++ +K+I+++ + VP + F +A
Sbjct: 237 -IDFCILCGCDYCDTIKGIGSKTAYNLIKEYNCIEKIIENIDQNKYQVPSNF--RFQEAR 293
Query: 276 LTFQHQRVYDPKTEDI 291
+F + V PK EDI
Sbjct: 294 KSFINPNVL-PK-EDI 307
>gi|72386509|ref|XP_843679.1| flap endonuclease-1 (FEN-1) [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74830896|sp|Q57WW6.1|FEN1_TRYB2 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376199|sp|C9ZKW4.1|FEN1_TRYB9 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|62175773|gb|AAX69901.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma brucei]
gi|70800211|gb|AAZ10120.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261326734|emb|CBH09707.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma brucei gambiense
DAL972]
Length = 393
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 21/280 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSC-------SRELC- 47
MG+ GL LL P IKE E G +A+D +++ ++ S EL
Sbjct: 1 MGVLGLSKLLYD-RTPGAIKEQELKVYFGRRIAIDASMAVYQFVIAMKGFQEGQSVELTN 59
Query: 48 KGLPTSRHIDYCMHRVNLLRHYGVKPILIFDG---GLLPMKIEQENKRARSRKENLARAI 104
+ + H+ R + G++PI +FDG L ++E +RA K +A
Sbjct: 60 EAGDVTSHLSGIFFRTLRMIDEGLRPIYVFDGKPPTLKASELESRRQRAEDAKHEFEKAK 119
Query: 105 ECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQV 164
E EG+ A + ++ V + E+ +L+ + + AP EA+AQ L +
Sbjct: 120 E---EGDDEAMEKMSKRMVRVGRDQMEEVKTLLRLMGIPVVQAPSEAEAQCAELVKKNKA 176
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
AV TED D + FG SR++ + +G+ + + ++ L GF+ Q +++CIL G
Sbjct: 177 WAVGTEDMDALAFG-SRVMLRHLTYGEAKKRPIAEYHLDEILEASGFSMQQFIDLCILLG 235
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
CDY+ + G+G +A I K+ S + I+ L + VP
Sbjct: 236 CDYVPRISGIGPHKAWEGIKKYGSLEAFIESLDGTRYVVP 275
>gi|302900157|ref|XP_003048206.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|317374915|sp|C7Z125.1|FEN1_NECH7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256729138|gb|EEU42493.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 395
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKQLFQIIKE-EAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNDSGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + K L G ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFN-SPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +K+++ ++
Sbjct: 239 PKVGPTTALKLIRDHGSLEKIVEAME 264
>gi|70942151|ref|XP_741275.1| flap exonuclease [Plasmodium chabaudi chabaudi]
gi|74978262|sp|Q4XXP8.1|FEN1_PLACH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56519555|emb|CAH78313.1| flap exonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 479
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 30/292 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSC------SRELCKGL 50
MGI+GL + + + I I+ L G VA+D L++ ++ + +
Sbjct: 1 MGIKGLTKFIADTAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDGDQYGNLMNEAG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ ++ + EG
Sbjct: 61 ETTSHISGLMSRTIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLLKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + I +P EA+AQ FL A TE
Sbjct: 121 NLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYDMAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQG---------------VEFQCSMLQKNKDLSFGGFTKQM 215
D+D + FG +I ++ E + K L+ F
Sbjct: 181 DADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEF---- 236
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
++ CIL GCDY ++ G+G K A+ LI ++ + +IK++ + VP +
Sbjct: 237 -IDFCILCGCDYCDTIKGIGSKTAYNLIKEYNCIENIIKNIDQNKYQVPDNF 287
>gi|355688549|gb|AER98539.1| flap structure-specific endonuclease 1 [Mustela putorius furo]
Length = 379
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L V Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G +++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLSQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G +RA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPRRAVGLIQKHKSIEEIVRQLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|402468038|gb|EJW03248.1| hypothetical protein EDEG_00228 [Edhazardia aedis USNM 41457]
Length = 362
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 20/297 (6%)
Query: 1 MGIQGLLPLLKSIMIPI----HIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPT---- 52
MGI L LL+ P I G +A+D L++ ++ R GL T
Sbjct: 1 MGIHQLSKLLQHSAKPAIKNRDISYFTGQRIAIDASLSLYQFLIAV-RSDGAGLTTDSGD 59
Query: 53 -SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE-G 110
+ H+ +R + G+KP+ +FDG +K+ E ++ + +++ A+ E E G
Sbjct: 60 TTSHLIGTFYRTIRIVTSGIKPLFVFDGLPPELKLSHELEKRKEKRDAAAKEYEMALETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ +F ++ V ++ + ++L V Y+VAP EA+A +L + V+AV TE
Sbjct: 120 DKEQIEKFDKRKVKVTKKHVDDCKKLLDLMKVPYVVAPSEAEAYAAYLCIKGVVDAVATE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQG----VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG ++ ++ VE+ + K ++ F +++CI+ GCD
Sbjct: 180 DMDALTFGAPILLRNLNAAENKKLPIVEYNLKEILKELKINHNQF-----IDVCIMLGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRV 283
Y++ L G G KRA+ +I K K + +++ K ++ S + F+ R+
Sbjct: 235 YVKPLRGFGPKRAYEMILKHKDIETILEKEKIKSLESTKNENSSEADDIWNFEEARI 291
>gi|452209484|ref|YP_007489598.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
gi|452099386|gb|AGF96326.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
Length = 338
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 19/304 (6%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I + +L VAVD ++ LH+ LS R+ +G TS H+ ++R L
Sbjct: 14 IELSDLSNRVVAVDAFNTLHQ-FLSIIRQRDGSPLVNSQGKVTS-HLSGLLYRTASLVEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK N+R R+ + + ++EGN A+Y++ Q + + I
Sbjct: 72 GIKPVFVFDGKPPEMKTGTLNRRKEIRESSKEKWENAKAEGNLEAAYKYAQASSKVDQDI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ +L + +I AP E +AQ + + K + V ++D D FG ++ +
Sbjct: 132 IEDSKYLLDIMGIPWIQAPCEGEAQAAHMVLKKDADCVASQDYDSFLFGAPTVVRNLAAT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + M++ + L G + L+++ I G DY + L +G K A
Sbjct: 192 GKRKLPGKNVYVDVELEMIELEETLDSLGINRDQLIDIAICVGTDYNKGLEKVGPKTALK 251
Query: 242 LISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD-PKTEDIVHLSCISDN 300
LI K + V++ K + +E F +T ++ + P +E +++ C ++
Sbjct: 252 LIKKHGNIHAVLRE-KGMEIEALDSIKELFTHPDVTDDYEIKWGKPDSEKLINFLCDEND 310
Query: 301 IGND 304
D
Sbjct: 311 FSED 314
>gi|196004776|ref|XP_002112255.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
gi|190586154|gb|EDV26222.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
Length = 247
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 16/249 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCM 60
MG++GL LL+S PI ++ LE +AVD WL++ +L R+ L + H+
Sbjct: 1 MGVKGLWKLLESAGQPITLESLENKILAVDISLWLNE-SLRGMRDHQGSLIENAHLLGLF 59
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+R+ L + ++P+ +FDGG+ +K K+ S+ ++ R++E + +
Sbjct: 60 YRLCKLLFFKIRPVFVFDGGVPLLK-----KQTISKLVDVQRSLEEQQTSLIQEHKRQER 114
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFG-- 178
A +S + E ++L + YIV+P EA+AQ L + Q + IT+DSD+ FG
Sbjct: 115 MAASVSNEMYSECQELLSLFGIPYIVSPMEAEAQCAVLDFTNQTDGTITDDSDIFLFGGR 174
Query: 179 -CSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLK 237
R +F+ K EF S Q+ + L G ++ ++ + L G DY + +G+
Sbjct: 175 NIYRYVFRESKLA---EFYDS--QRIQRLM--GLDRKKMITLAYLLGSDYTDGIKNVGIV 227
Query: 238 RAHALISKF 246
A L+S F
Sbjct: 228 MAMELLSTF 236
>gi|413946273|gb|AFW78922.1| flap endonuclease 1a [Zea mays]
Length = 523
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 26/324 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 145 MGIKGLTKLLAD-NAPKAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGMETLTNEAG 203
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ +R L G+KP+ +FDG MK ++ KR R + E G
Sbjct: 204 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVG 263
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A + ++ V ++ + ++L+ V + AP EA+A+ L ++ +V AV +E
Sbjct: 264 DKDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASE 323
Query: 171 DSDLIPFGCSRIIFK-MDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG R + MD + + EF + + + +L+ F +++CIL GCD
Sbjct: 324 DMDSLTFGAPRFLRHLMDPSSKKIPVMEFDVAKVLEELELTMDQF-----IDLCILCGCD 378
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
Y S+ G+G + A LI + S + ++++L +P + + +A F+ V
Sbjct: 379 YCDSIKGIGGQTALKLIRQHGSIESILENLNKDRYQIPEDW--PYQEARRLFKEPNV--- 433
Query: 287 KTEDIVHLSCISDNIGNDLDFLAK 310
T DI L + + + FL K
Sbjct: 434 -TLDIPELKWTAPDEEGLISFLVK 456
>gi|221485037|gb|EEE23327.1| flap endonuclease-1, putative [Toxoplasma gondii GT1]
Length = 552
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 19/272 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLPT--- 52
MGI+GL + P IK E G +A+D L++ ++ G T
Sbjct: 1 MGIKGLGKFVGDFA-PRAIKRQEPGSFTGRVIAIDASMSLYQFMVAIRDGNSFGNFTNDA 59
Query: 53 ---SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
+ HI ++R L GV+P+ +FDG +K + KR R+ A + E
Sbjct: 60 GDCTSHIAGMLNRAIRLLEQGVRPVYVFDGKPPELKSGELAKRRELRESAQEAAEKAREE 119
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
GN + ++V +S ++ ++L+ + + AP EA+AQ L +++V A T
Sbjct: 120 GNVEELRKQIVRSVRVSKQHNEDVKRLLRLMGLPVVEAPCEAEAQCAELTKNRKVWATAT 179
Query: 170 EDSDLIPFGCSRII----FKMDKFGQGVEFQCS---MLQKNKDLSFGGFTKQMLLEMCIL 222
ED+D + FG +R+I F G G S ++ L F+++ ++ CIL
Sbjct: 180 EDADALTFGATRLIRNLTFGERSSGSGASATASGILVIDLPTLLEELQFSQEQFIDFCIL 239
Query: 223 SGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
GCDY +L G+G K A++L+ + S +K+++
Sbjct: 240 CGCDYCGTLKGVGAKTAYSLVKEHGSIEKILE 271
>gi|336467513|gb|EGO55677.1| DNA-repair protein rad2 [Neurospora tetrasperma FGSC 2508]
Length = 396
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 13/268 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAV------DTYSWLHKGALSCSRELCKG 49
MGI+ L ++K P IKE E G VA+ YS+L + + +
Sbjct: 1 MGIKQLFSVIKD-EAPDAIKEGEIKNQFGRKVAIKKKTSMSIYSFLIAVRSDGQQLMNEA 59
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E +
Sbjct: 60 GETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKET 119
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + +F ++ V ++ E ++LK + YIVAP EA+AQ LA + +V A +
Sbjct: 120 GTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAAS 179
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + F I+ + F + + + K L G ++ +++CIL GCDYL
Sbjct: 180 EDMDTLCFNAP-ILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLD 238
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLK 257
+P +G A LI + + +KV++ +K
Sbjct: 239 PIPKVGPSTALKLIREHGTLEKVVEWMK 266
>gi|342882941|gb|EGU83505.1| hypothetical protein FOXB_05915 [Fusarium oxysporum Fo5176]
Length = 395
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKQLFSIIKE-EAPDSIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSEGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFNAP-ILLRHLTFSEQRKEPIQEIHLEKVLEGLNMERKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ ++
Sbjct: 239 PKVGPSTALKLIREHGSLEKVVEAIE 264
>gi|26335423|dbj|BAC31412.1| unnamed protein product [Mus musculus]
Length = 380
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ + DG +K + KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVLDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 117 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|237836211|ref|XP_002367403.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|211965067|gb|EEB00263.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|221505908|gb|EEE31543.1| flap endonuclease-1, putative [Toxoplasma gondii VEG]
Length = 552
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 19/272 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLPT--- 52
MGI+GL + P IK E G +A+D L++ ++ G T
Sbjct: 1 MGIKGLGKFVGDFA-PRAIKRQEPGSFTGRVIAIDASMSLYQFMVAIRDGNSFGNFTNDA 59
Query: 53 ---SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
+ HI ++R L GV+P+ +FDG +K + KR R+ A + E
Sbjct: 60 GDCTSHIAGMLNRAIRLLEQGVRPVYVFDGKPPELKSGELAKRRELRESAQEAAEKAREE 119
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
GN + ++V +S ++ ++L+ + + AP EA+AQ L +++V A T
Sbjct: 120 GNVEELRKQIVRSVRVSKQHNEDVKRLLRLMGLPVVEAPCEAEAQCAELTKNRKVWATAT 179
Query: 170 EDSDLIPFGCSRII----FKMDKFGQGVEFQCS---MLQKNKDLSFGGFTKQMLLEMCIL 222
ED+D + FG +R+I F G G S ++ L F+++ ++ CIL
Sbjct: 180 EDADALTFGATRLIRNLTFGERASGSGASATASGILVIDLPTLLEELQFSQEQFIDFCIL 239
Query: 223 SGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
GCDY +L G+G K A++L+ + S +K+++
Sbjct: 240 CGCDYCGTLKGVGAKTAYSLVKEHGSIEKILE 271
>gi|374327648|ref|YP_005085848.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
gi|356642917|gb|AET33596.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
Length = 346
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 133/269 (49%), Gaps = 18/269 (6%)
Query: 1 MGIQGLLPLL-KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------T 52
MG+ L L+ + I + ++ L G CV++D Y+ L++ S + G P
Sbjct: 1 MGVVELGKLIGREIRRDVKLENLAGRCVSLDAYNALYQFLASIRQ--PDGTPLMDREGRI 58
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R L G+KP+ +FDG K+ + R ++R++ + ++ EG
Sbjct: 59 TSHLSGLFYRTINLLESGIKPVYVFDGKPPEFKLAEIESRRKTREKAMEEVVKALKEGRK 118
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
++ ++AV I+ + E ++L V ++ AP E +AQ ++ V AV ++D
Sbjct: 119 EDVIKYAKRAVFITSEMVEESRKLLSYMGVPWVQAPSEGEAQAAYMVVKGHCWAVGSQDY 178
Query: 173 DLIPFGCSRIIFKM-----DKFGQG-VEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGC 225
D + FG R++ + + G+ VE +++ + L + ++ L+++ IL G
Sbjct: 179 DALLFGSPRLVRNLAVSPKRRVGEEVVELAPEIIELDAVLKALRLKNREQLIDLAILLGT 238
Query: 226 DY-LQSLPGMGLKRAHALISKFKSYDKVI 253
DY +PGMG ++A LI +F S +K++
Sbjct: 239 DYNPDGVPGMGPQKALKLIWEFGSLEKML 267
>gi|37719664|gb|AAR01941.1| flap endonuclease 1 [Plasmodium falciparum]
Length = 648
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 30/292 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL------ 50
MGI+GL + + + I I+ L G +A+D L++ ++ G
Sbjct: 1 MGIKGLTKFIADAAPNAIKEIKIESLMGRIIAIDASMSLYQFIIAIRDSEQYGNLTNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ + + EG
Sbjct: 61 ETTSHISGLMSRSIRLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + I AP EA++Q FL A TE
Sbjct: 121 NLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQG---------------VEFQCSMLQKNKDLSFGGFTKQM 215
D+D + FG +I ++ E + K +L+ F
Sbjct: 181 DADALVFGTKILIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEF---- 236
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
++ CIL GCDY ++ G+G K A+ LI ++ +K+I+++ + VP +
Sbjct: 237 -IDFCILCGCDYCDTIKGIGSKTAYNLIKEYNCIEKIIENIDQNKYQVPSNF 287
>gi|308504826|ref|XP_003114596.1| CRE-CRN-1 protein [Caenorhabditis remanei]
gi|308258778|gb|EFP02731.1| CRE-CRN-1 protein [Caenorhabditis remanei]
Length = 382
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCK----GLPT 52
MGI+GL ++ S + IK G VA+D L++ ++ ++ + T
Sbjct: 1 MGIKGLSQVIADNAPSAIKISEIKAFFGRKVAIDASMCLYQFLIAVRQDGAQLQSEDGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R + G+KP+ +FDG MK + KR+ R E E + +G++
Sbjct: 61 TSHLMGMFYRTIRMIDNGIKPVYVFDGKPPDMKSGELEKRSERRAEAEKALTEAKEKGDA 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ +F ++ V ++ ++ Q+L + + AP EA+AQ L + +V TED
Sbjct: 121 KEAEKFERRLVKVTKQQNEDVKQLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDM 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
D + FG S ++ + + + + L T++ +++CIL GCDY ++
Sbjct: 181 DALTFG-SCVLLRHLLAPESKKIPIKEFHLARILEEMKLTEEEFIDLCILLGCDYCGTIR 239
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY-------- 284
G+G KRA LI+++K+ + +++++ + PP + + +A F V
Sbjct: 240 GVGPKRAVELINQYKNIETILENIDLT--KYPPPEDWPYKRARELFLQPDVTKGEEIELT 297
Query: 285 --DPKTEDIVHLSCISDNIGND 304
+P E IV C N +
Sbjct: 298 WKEPDVEGIVRFMCGDKNFSEE 319
>gi|410670767|ref|YP_006923138.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
gi|409169895|gb|AFV23770.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
Length = 338
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 127/253 (50%), Gaps = 17/253 (6%)
Query: 16 PIHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRH 68
P+ + +L +A+D Y+ L++ LS R+ KG TS H+ ++R++ L
Sbjct: 13 PVELSDLSSKVIAIDAYNTLYQ-FLSIIRQKDGTPLKDSKGNITS-HLSGLLYRMSSLME 70
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
G++P+ +FDG MK KR ++R+ + + + EG + +Y++ Q + + +
Sbjct: 71 AGIRPVFVFDGKPPQMKSPTIEKRVQARENAQMKWEQAQEEGLAEEAYKYAQASSRVDAT 130
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
I + ++L + ++ AP E +AQ ++ + + + ++D D + FG R++ +
Sbjct: 131 IVEDSRKLLNAMGIPFLDAPSEGEAQAAYMVIKRDADYAGSQDYDSLLFGAPRVVRNLTV 190
Query: 189 FGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
G+ V+ + +++ + L T++ L+++ + G DY Q + +G K+A
Sbjct: 191 SGKRKLPKKNLYVDVKPEVMELEETLLGLDVTREQLIDIALCVGTDYNQGITNIGPKKAL 250
Query: 241 ALISKFKSYDKVI 253
L+ + S +K++
Sbjct: 251 KLVKEHGSIEKIL 263
>gi|379991146|ref|NP_001244014.1| flap endonuclease 1 [Equus caballus]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRGERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP+T
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPET 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|410974093|ref|XP_003993482.1| PREDICTED: flap endonuclease 1 [Felis catus]
Length = 380
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAGEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S SVP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYSVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|302415469|ref|XP_003005566.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
gi|261354982|gb|EEY17410.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
Length = 308
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L +LK P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKNLFQILKE-EAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEAKEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++L+ V +I+AP EA+AQ LA +V A +ED
Sbjct: 120 AEDIEKFSRRTVRVTREHNAECQKLLRLMGVPFIIAPTEAEAQCAVLAKGGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + + + + + +K + G + +++CIL GCDYL +
Sbjct: 180 MDTLTFETP-ILLRHLTYSEQRKEPIQEIHLDKVMEGLGMERNQFVDLCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + K+ + V+ ++K
Sbjct: 239 PKVGPSTALKLIREHKTLEGVVDYIK 264
>gi|164426998|ref|XP_001728355.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
gi|157071561|gb|EDO65264.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
Length = 396
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 13/268 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAV------DTYSWLHKGALSCSRELCKG 49
MGI+ L ++K P IKE E G VA+ YS+L + + +
Sbjct: 1 MGIKQLFSVIKD-EAPDAIKEGEIKNQFGRKVAIVSFISMSIYSFLIAVRSDGQQLMNEA 59
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E +
Sbjct: 60 GETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKET 119
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + +F ++ V ++ E ++LK + YIVAP EA+AQ LA + +V A +
Sbjct: 120 GTAEDVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAAS 179
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + F I+ + F + + + K L G ++ +++CIL GCDYL
Sbjct: 180 EDMDTLCFNAP-ILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLD 238
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLK 257
+P +G A LI + + +KV++ +K
Sbjct: 239 PIPKVGPSTALKLIREHGTLEKVVEWMK 266
>gi|359487708|ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
Length = 384
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 29/288 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +A+D +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECE 107
+ H+ R L G+KP+ +FDG +K ++ KR R E+L A+E
Sbjct: 60 EVTSHLQGMFSRTIRLLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALET- 118
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
GN +F ++ V ++ + ++L+ V I AP EA+AQ L S +V AV
Sbjct: 119 --GNKEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAV 176
Query: 168 ITEDSDLIPFGCSRIIFK-MDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ED D + FG + + MD + + EF + + + +L+ F +++CILS
Sbjct: 177 ASEDMDSLTFGAPKFLRHLMDPSSRKIPVMEFDITKILEELNLTMDQF-----IDLCILS 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
GCDY S+ G+G + A LI + S + +++++ +P P+ E
Sbjct: 232 GCDYCDSIRGIGGQTALKLIRQHGSIENILENINRERYQIPDDWPYQE 279
>gi|350287839|gb|EGZ69075.1| DNA-repair protein rad2, partial [Neurospora tetrasperma FGSC 2509]
Length = 390
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 56 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 115
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YIVAP EA+AQ LA + +V A +ED
Sbjct: 116 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASED 175
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + K L G ++ +++CIL GCDYL +
Sbjct: 176 MDTLCFNAP-ILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLDPI 234
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + +KV++ +K
Sbjct: 235 PKVGPSTALKLIREHGTLEKVVEWMK 260
>gi|195629924|gb|ACG36603.1| flap endonuclease 1a [Zea mays]
Length = 379
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 26/324 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGMETLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ +R L G+KP+ +FDG MK ++ KR R + E G
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A + ++ V ++ + ++L+ V + AP EA+A+ L ++ +V AV +E
Sbjct: 120 DKDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG R + MD + + EF + + + +L+ F +++CIL GCD
Sbjct: 180 DMDSLTFGAPRXLRHLMDPSSKKIPVMEFDVAKVLEELELTMDQF-----IDLCILCGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
Y S+ G+G + A LI + S + ++++L +P + + +A F+ V
Sbjct: 235 YCDSIKGIGGQTALKLIRQHGSIESILENLNKDRYQIPEDW--PYQEARRLFKEPNV--- 289
Query: 287 KTEDIVHLSCISDNIGNDLDFLAK 310
T DI L + + + FL K
Sbjct: 290 -TLDIPELKWTAPDEEGLISFLVK 312
>gi|221485216|gb|EEE23506.1| exonuclease, putative [Toxoplasma gondii GT1]
Length = 262
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 30/207 (14%)
Query: 1 MGIQGLLPLLKS-IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC-----KGLPTSR 54
MG++GL L S + +H+++ G +AVD SWLHK A C+ L K L + R
Sbjct: 1 MGVKGLWNWLDSNVKERMHLRDFSGKTIAVDASSWLHKAACGCALALLLVEEKKRLLSDR 60
Query: 55 H-----------------------IDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENK 91
+ +C+ ++ LL +GV+P L+FDGG L K
Sbjct: 61 ESREEPEAGACNPLEEECEAYRQILRFCLGKIRLLTSFGVRPFLVFDGGQLEAKAPANES 120
Query: 92 RARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLK-QQNVSYIVAPYE 150
R +R+ + A A+ G+ + ++ A+ +S S+ + + + L+ Q V I A YE
Sbjct: 121 RRLTRRRHAALALAAHRAGDVANAWRHAVGAISVSLSLRNFVFRNLQGHQGVVCISAAYE 180
Query: 151 ADAQMTFLAVSKQVEAVITEDSDLIPF 177
ADAQM L +AV+TED DL+ +
Sbjct: 181 ADAQMARLVADGFADAVLTEDGDLLAY 207
>gi|237842321|ref|XP_002370458.1| XPG N-terminal domain containing protein [Toxoplasma gondii ME49]
gi|211968122|gb|EEB03318.1| XPG N-terminal domain containing protein [Toxoplasma gondii ME49]
gi|221502590|gb|EEE28310.1| flap endonuclease-1, putative [Toxoplasma gondii VEG]
Length = 268
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 30/207 (14%)
Query: 1 MGIQGLLPLLKS-IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC-----KGLPTSR 54
MG++GL L S + +H+++ G +AVD SWLHK A C+ L K L + R
Sbjct: 1 MGVKGLWNWLDSNVKERMHLRDFSGKTIAVDASSWLHKAACGCALALLLVEEKKRLLSDR 60
Query: 55 H-----------------------IDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENK 91
+ +C+ ++ LL +GV+P L+FDGG L K
Sbjct: 61 ESREEPEAGACNPLEEECEAYRQILRFCLGKIRLLTSFGVRPFLVFDGGQLEAKAPANES 120
Query: 92 RARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLK-QQNVSYIVAPYE 150
R +R+ + A A+ G+ + ++ A+ +S S+ + + + L+ Q V I A YE
Sbjct: 121 RRLTRRRHAALALAAHRAGDVANAWRHAVGAISVSLSLRNFVFRNLQGHQGVVCISAAYE 180
Query: 151 ADAQMTFLAVSKQVEAVITEDSDLIPF 177
ADAQM L +AV+TED DL+ +
Sbjct: 181 ADAQMARLVADGFADAVLTEDGDLLAY 207
>gi|449510827|ref|XP_004163772.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Cucumis
sativus]
Length = 382
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 29/288 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +A+D +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKGMKEQKFEAYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECE 107
+ H+ +R L G+KP+ +FDG +K ++ KR R E+LA AIE
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKXQELAKRYSKRADATEDLADAIEV- 118
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
GN +F ++ V ++ + ++L+ V I AP EA+AQ L +V AV
Sbjct: 119 --GNKDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAV 176
Query: 168 ITEDSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ED D + FG R + MD + + EF+ + + + +L+ F +++CILS
Sbjct: 177 ASEDMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQF-----IDLCILS 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
GCDY ++ G+G A LI + S + +++++ +P P+ E
Sbjct: 232 GCDYCDNIRGIGGLTALKLIRQHGSIESILENINKERYQIPDDWPYKE 279
>gi|317374910|sp|B4FHY0.1|FEN1_MAIZE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194695278|gb|ACF81723.1| unknown [Zea mays]
Length = 379
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 26/324 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGMETLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ +R L G+KP+ +FDG MK ++ KR R + E G
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A + ++ V ++ + ++L+ V + AP EA+A+ L ++ +V AV +E
Sbjct: 120 DKDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG R + MD + + EF + + + +L+ F +++CIL GCD
Sbjct: 180 DMDSLTFGAPRFLRHLMDPSSKKIPVMEFDVAKVLEELELTMDQF-----IDLCILCGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
Y S+ G+G + A LI + S + ++++L +P + + +A F+ V
Sbjct: 235 YCDSIKGIGGQTALKLIRQHGSIESILENLNKDRYQIPEDW--PYQEARRLFKEPNV--- 289
Query: 287 KTEDIVHLSCISDNIGNDLDFLAK 310
T DI L + + + FL K
Sbjct: 290 -TLDIPELKWTAPDEEGLISFLVK 312
>gi|74219985|dbj|BAE40572.1| unnamed protein product [Mus musculus]
Length = 380
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 117 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TE D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEGMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|340518918|gb|EGR49158.1| Rad27p/FEN-1 endonuclease-like protein [Trichoderma reesei QM6a]
Length = 395
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKQLFQIVKE-EAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNDSGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + ++ +K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFNTP-ILLRHLTFSEQRKEPIQEIRLDKVLEGLNMEREQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + +KV++ ++
Sbjct: 239 PKVGPTTALKLIREHGTLEKVVEAIE 264
>gi|383320867|ref|YP_005381708.1| flap endonuclease 1 [Methanocella conradii HZ254]
gi|379322237|gb|AFD01190.1| flap endonuclease 1 [Methanocella conradii HZ254]
Length = 339
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I +KEL G +A+D ++ L++ LS R+ G P + H+ ++RV L
Sbjct: 14 IELKELSGKIIAIDAFNTLYQ-FLSIIRQ-PDGTPLVDEKGQVTSHLSGIIYRVTNLIEL 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAI-ECESEGNSSASYEFYQKAVDISPS 128
G+KP+ +FDG P ++ E +AR+ AR + E E S+ +Y++ Q A I+
Sbjct: 72 GIKPVFVFDGK--PPLLKAETIKARAEVREAARQMYEAAVEEGSAEAYKYAQAATSINAQ 129
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
I + +L + +IVAP E +AQ + + + V ++D D + FG R++ +
Sbjct: 130 IIEDSKTLLGYMGIPFIVAPSEGEAQASCMVSKGAADYVGSQDYDSLLFGAPRMVRNVTI 189
Query: 189 FGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
G+ V+ + +++ + L T++ L+++ IL G D+ + +G K A
Sbjct: 190 TGRRKVPRRNIYVDVKPEIVELKETLETLDITREQLIDIGILVGTDFNPGIYKVGPKTAL 249
Query: 241 ALISKFKSYDKVIKHLK 257
L+ K K+ +V L+
Sbjct: 250 KLVKKHKNMQEVFGELE 266
>gi|358385848|gb|EHK23444.1| hypothetical protein TRIVIDRAFT_37094 [Trichoderma virens Gv29-8]
Length = 395
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKQLFQIVKE-EAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNDSGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + ++ +K L + +++CIL GCDYL +
Sbjct: 180 MDTLCFNTP-ILLRHLTFSEQRKEPIQEIRLDKVLEGLNMERDQFVDLCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ ++
Sbjct: 239 PKVGPTTALKLIREHGSLEKVVEAIE 264
>gi|407034393|gb|EKE37191.1| flap nuclease, putative [Entamoeba nuttalli P19]
Length = 376
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 33/304 (10%)
Query: 1 MGIQGLLPLLKSI----MIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL------ 50
MGI+GL LL M I + G +A+D S L +S R+
Sbjct: 1 MGIKGLSKLLARYAPKSMKEGKIDQYSGRVIAIDA-SILVYQFISAVRDTTGATMVDEFG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKR---ARSRKENLARAIECE 107
T+ HI +R L G+KP+ +FDG MK + NKR A+ +E L +A+E
Sbjct: 60 ETTSHIIGTFYRTIKLIESGIKPVYVFDGKPPEMKDGELNKRKENAQKAQEQLDKALE-- 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
EG+ + + ++ ++ + E+ ++L+ + I A EA+ L + + A
Sbjct: 118 -EGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPCIEANCEAEGSCAALVKAGKCYAT 176
Query: 168 ITEDSDLIPFGCSRIIFKM----DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
TED D + G ++ K +K E+ S + L GFT + +++CIL
Sbjct: 177 ATEDMDALTLGSEHVVRKFSASDNKKDPIREYSLSSI-----LEETGFTMEQFIDLCILL 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL--KYSTVSVPPFYEESFGKAVLTFQHQ 281
GCDY +++ G+G A LI ++KS + +++HL KY VP ++ + +A F H
Sbjct: 232 GCDYCETIKGVGPITAFELIQQYKSIENILQHLSDKY---KVPENWK--YKEARELFLHP 286
Query: 282 RVYD 285
V D
Sbjct: 287 DVAD 290
>gi|378733116|gb|EHY59575.1| flap endonuclease 1 [Exophiala dermatitidis NIH/UT8656]
Length = 395
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E +A E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFARKNEANEQAEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEEVEKFSRRTVRVTREHNEECRRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L G + +++CIL GCDY+ +
Sbjct: 180 MDTLCFNAP-ILLRHLTFSEQRKEPIQEIHLDKTLEGLGMDRTQFIDLCILLGCDYVDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + +KV++ ++
Sbjct: 239 PKVGPNTALKLIREHGTLEKVVEFIE 264
>gi|449299844|gb|EMC95857.1| hypothetical protein BAUCODRAFT_109503 [Baudoinia compniacensis
UAMH 10762]
Length = 393
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 11/268 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKNLAQVIKD-NAPDAIKEGEIKNQFGRKVAIDASMSLYSFLVAVRSDGQQLMSDTGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E E + G
Sbjct: 60 TTSHLMGLFYRTLRIVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQESHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V +I+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S ++ + F + + + + LS +++CIL GCDY+ +
Sbjct: 180 MDTLTFN-SPVLLRHLTFSEQRKEPIQEIHLDAVLSGLEMDLPQFIDLCILLGCDYVDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYS 259
G+G K A ALI + K+ +KV++ + S
Sbjct: 239 KGIGPKVALALIREHKTLEKVVESVTKS 266
>gi|406699511|gb|EKD02713.1| exonuclease [Trichosporon asahii var. asahii CBS 8904]
Length = 323
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 23/169 (13%)
Query: 186 MDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCI------------LSGCDYLQSLPG 233
MDK G V + + + +DL G+T M + LSGCDYL S+ G
Sbjct: 1 MDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYLPSIVG 60
Query: 234 MGLKRAHALISKFKSYDKVIKHLKYSTVS-VPPFYEESFGKAVLTFQHQRVYDPKTEDIV 292
+GLK+AH L+ + K+ ++VI+ ++ VP Y E+F +A L F HQRVY P + +V
Sbjct: 61 IGLKKAHRLLRRLKTVERVIQSIRLDGAHLVPDGYIEAFNQAELAFLHQRVYCPHEKRLV 120
Query: 293 HL-----SCISDN----IGNDLD-FLAKGIAIGDLDPFTQLPFQEVSDN 331
L S +S + IG D++ +A+G+A+GDL P ++ P +++ N
Sbjct: 121 PLCEFPASGLSGDDEKWIGLDVEPMVAQGMALGDLHPESRKPIEDLWPN 169
>gi|41614884|ref|NP_963382.1| flap endonuclease-1 [Nanoarchaeum equitans Kin4-M]
gi|48427872|sp|P61942.1|FEN_NANEQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40068608|gb|AAR38943.1| NEQ088 [Nanoarchaeum equitans Kin4-M]
Length = 339
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 10 LKSIMIP----IHIKELEGCCVAVDTYSWLHKGALSCSREL-----CKGLPTSRHIDYCM 60
LK I+ P I K+L G +A+D ++ L++ S ++ KG TS H+
Sbjct: 5 LKEIVDPVKKEIEFKQLFGKVIAIDAFNALYQFLFSIRQDGEPLRDSKGRITS-HLSGLF 63
Query: 61 HRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+R L YG+KPI +FDG KI KR + +++ ++ E +GN + ++ +
Sbjct: 64 YRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQEAIKYAK 123
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ + E ++L+ + Y+ AP E +A+ +L + ++D D + FG
Sbjct: 124 SLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDSLLFGSP 183
Query: 181 RII--------FKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
R++ K+ VE + +++ L++ T++ L+ + +L G DY + +P
Sbjct: 184 RVVRNITISEKRKLPGKNIYVEVKPEVIELEAVLNYWKITREQLIAIAMLLGTDYNEKVP 243
Query: 233 GMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A ++ +F KVI++ K
Sbjct: 244 GIGPKTAIEIVKRFGDPIKVIEYYK 268
>gi|317374875|sp|C3KJE6.1|FEN1_ANOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229367576|gb|ACQ58768.1| Flap endonuclease 1-A [Anoplopoma fimbria]
Length = 380
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 17/302 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE + G +A+D L++ ++ ++ +
Sbjct: 1 MGIHGLTKLIAD-QAPGAIKEQDIKNYFGRKIAIDASMCLYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGEKRAEAEKMLAQAQELGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V YI AP EA+A L + +V A TED
Sbjct: 120 QENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + L ++ L G T + +++CI GCDY ++
Sbjct: 180 MDGLTFG-TNVLLRHLTASEAKKLPIQELHYSRILQDIGLTNEQFIDLCIPLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEESFGKAVLTFQHQRVYDPKTE 289
G+G KRA LI + S +++++++ S P Y+E+ G F V D T
Sbjct: 239 KGIGPKRAIDLIKQHGSIEEILENIDSSKHPAPEDWLYKEARG----LFLKAEVVDCSTV 294
Query: 290 DI 291
D+
Sbjct: 295 DL 296
>gi|410909029|ref|XP_003967993.1| PREDICTED: flap endonuclease 1-like [Takifugu rubripes]
Length = 380
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 11/273 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE + G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-QAPGAIKEQDIKNYFGRKIAIDASMCMYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSSELEKRGEKRAEAEKLLAQAQETGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ + E ++L V YI AP EA+A L + +V A TED
Sbjct: 120 QENIEKFSKRLVKVTKQHSDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + ++ L G T + +++CIL GCDY ++
Sbjct: 180 MDGLTFG-TNVLLRHLTASEAKKLPIQEFHFSRVLQETGLTNEQFIDLCILLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
G+G KRA LI + S +++++++ + P
Sbjct: 239 KGIGPKRAIDLIKQHGSIEEILENIDTNKYPSP 271
>gi|432927428|ref|XP_004081007.1| PREDICTED: flap endonuclease 1-like [Oryzias latipes]
Length = 380
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 35/349 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE + G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-HAPSAIKEQDIKSYFGRKIAIDASMCMYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSSELEKRGERRAEAEKLLAQAQEMGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V YI AP EA+A L +V A TED
Sbjct: 120 QENVEKFTKRLVKVTKQHNDECKKLLSLMGVPYIEAPCEAEASCAALVKEGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + N+ L TK+ +++CIL GCDY ++
Sbjct: 180 MDGLTFG-TNVLLRHLTASEAKKLPIQEFHFNRILQDMDLTKEQFIDLCILLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEESFGKAVLTFQHQRVYD---- 285
G+G KRA LI + +++++++ S P Y+E+ G F V D
Sbjct: 239 KGIGPKRAVDLIRQHGCIEEILENIDSKKHSAPEDWLYKEARG----LFLKPEVVDCSSV 294
Query: 286 ------PKTEDIVHLSC-----ISDNIGNDLDFLAK---GIAIGDLDPF 320
P E +V C D I N + K G G LD F
Sbjct: 295 ELKWNEPDEEGLVQFMCNEKQFSEDRIRNGCKKIVKSRQGSTQGRLDSF 343
>gi|358394482|gb|EHK43875.1| hypothetical protein TRIATDRAFT_300264 [Trichoderma atroviride IMI
206040]
Length = 395
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKQLFQIVKE-EAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFNTP-ILLRHLTFSEQRKEPIQEIHLDRVLEGLNMERKQFVDLCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ ++
Sbjct: 239 PKVGPTTALKLIREHGSLEKVVEAIE 264
>gi|298706804|emb|CBJ29727.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 476
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 30/294 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDT----YSWL---HKGALSCSRELCK- 48
MGI GL LL + M + + L G VAVD Y +L G S+ L
Sbjct: 1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNE 60
Query: 49 -GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMK----IEQENKRARSRKENLARA 103
G TS HI +R + GVKP IFDG +K ++ KRA++ E L A
Sbjct: 61 AGEVTS-HIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAE-LKVA 118
Query: 104 IECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ 163
E + + + +F ++ V ++ + ++L V + AP EA+AQ LA
Sbjct: 119 TEADDKNDVD---KFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGV 175
Query: 164 VEAVITEDSDLIPFGCSRIIFKMDKFGQG---VEFQCSMLQKNKDLSFGGFTKQMLLEMC 220
V TED D + F +++ +M G +E L + +LS F +++C
Sbjct: 176 VYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKF-----VDLC 230
Query: 221 ILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKA 274
+L GCDY S+ G+G K+A AL+ + + +++IKHL VP + E +A
Sbjct: 231 VLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWLEPAERA 284
>gi|444513068|gb|ELV10260.1| Flap endonuclease 1 [Tupaia chinensis]
Length = 380
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDMLQNE--E 57
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
G TS H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 58 GDTTS-HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEVEKFSKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G +++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLSQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|343471550|emb|CCD16055.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 23/281 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCC-----VAVDTYSWLHKGALSC-------SRELCK 48
MG+ GL LL P IKE E C +A+D +++ ++ S EL
Sbjct: 41 MGVLGLSKLLYD-RAPGAIKEKELKCYFGRRIAIDASMAVYQFVIAMKGFQEGQSVELTN 99
Query: 49 --GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMK---IEQENKRARSRKENLARA 103
G TS H++ R + G++PI +FDG +K ++ +RA K +A
Sbjct: 100 DAGEVTS-HLNGIFFRTLRMIDEGLRPIYVFDGKPPSLKNSELDSRRQRAEEAKHEYEKA 158
Query: 104 IECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ 163
E EG+ A + ++ V +S E+ +L+ + + AP EA+AQ L +
Sbjct: 159 KE---EGDDEAMEKMSKRMVRVSREQMDEVKTLLQLMGIPVVQAPSEAEAQCAELVRKDK 215
Query: 164 VEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
AV TED D + FG +R++ + +G+ + + L G T + +++CIL
Sbjct: 216 AWAVGTEDMDALAFG-ARVMLRHLTYGEAKKRPIAEYHLEDILELAGMTMEQFIDLCILL 274
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
GCDY+ +PG+G +A I K+ S + ++ L + VP
Sbjct: 275 GCDYVPKIPGIGPHKAWEGIKKYGSMEAFLESLDGTKYVVP 315
>gi|317376211|sp|B8MNF2.2|FEN1_TALSN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSDGQQLMSDAGETTSHLMGMFYRTLRIVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR+ ++E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKGGELAKRSARKREAHEAHEEAKETGTAEDMEKFSRRTVRVTREHNEECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK V YI AP EA+AQ LA + +V A +ED D + F I+ + F + +
Sbjct: 143 KLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ +K L G ++ +++CIL GCDYL+ +P +G A LI + S +KV++
Sbjct: 202 EPIQEIHLDKALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AIE 264
>gi|317376215|sp|A5DCF5.3|FEN1_PICGU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 374
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHAPEAFREFQLKNLFGRKVAIDASMCLYQYLIAVRQSDGQQLTSEDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KR +KE L + + +
Sbjct: 61 TTSHLSGMFYRTIRLVENGIKPMYVFDGKPPVLKGGELEKRMIRKKEALKQQEDIKDTAT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +++V ++ +E ++L+ + Y+ AP EA+AQ LAV+ +V A +ED
Sbjct: 121 VEEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + ++ + F + + + K + KQ +++CIL GCDY +++
Sbjct: 181 MDTLCYSPPYLLRHL-TFAEARKMPIDQIDYKKAMEGLEMDKQTFIDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A LI + S D ++K ++
Sbjct: 240 KGVGPVTAFKLIKEHGSLDNIVKWIE 265
>gi|68062082|ref|XP_673044.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490604|emb|CAI01886.1| hypothetical protein PB300433.00.0 [Plasmodium berghei]
Length = 375
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 20/288 (6%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSC------SRELCKGL 50
MGI+GL + + + I I+ L G VA+D L++ ++ + +
Sbjct: 1 MGIKGLTKFIADTAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDGDQYGNLMNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ I+ + EG
Sbjct: 61 ETTSHISGLMSRTIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLIKAKEEG 120
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + I +P EA+AQ FL + A TE
Sbjct: 121 NLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATE 180
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCS--------MLQKNKDLSFGGFTKQM--LLEMC 220
D+D + FG +I ++ + + + + N + G M ++ C
Sbjct: 181 DADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFIDFC 240
Query: 221 ILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
IL GCDY ++ G+G K A+ LI ++ + +IK++ + VP ++
Sbjct: 241 ILCGCDYCDTIKGIGSKTAYNLIKEYNCIENIIKNIDQNKYQVPANFK 288
>gi|168066677|ref|XP_001785260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374868|sp|A9U328.1|FEN12_PHYPA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|162663130|gb|EDQ49912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 20/285 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCK--G 49
MGI+GL LL P +KE + G +A+D YS+L + + L G
Sbjct: 1 MGIKGLTKLLAD-NAPDSMKEQKFESYFGRKIAIDASMSIYSFLVVVGRTGTDMLTNDAG 59
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
TS H+ +R + G+KP+ +FDG MK + KR R+E + + E
Sbjct: 60 EVTS-HLIGMFNRTIRVLEAGLKPVYVFDGKPPEMKGGELAKRLARREEAVESLATAKLE 118
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
GN + ++ ++ V ++ + ++L+ V + AP EA+A+ L + +V AV +
Sbjct: 119 GNEADMEKYSKRTVKVTKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKTGKVYAVAS 178
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ--KNKDLSFGGFTKQMLLEMCILSGCDY 227
ED D + FG +R + + + V + +++ NK L T +++CIL GCDY
Sbjct: 179 EDMDSLTFGSTRFLRHL---MEPVSRKLPVMEFDMNKVLEGLSLTMDQFVDLCILCGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF-YEES 270
+ ++ G+G + A LI + S +K++++L +P P+ YEE+
Sbjct: 236 IDTIRGIGAQTALKLIRQHGSLEKILENLNKDRYQIPDPWPYEEA 280
>gi|148230426|ref|NP_001080960.1| flap endonuclease 1-A [Xenopus laevis]
gi|82071385|sp|P70040.1|FEN1A_XENLA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A;
Short=xFEN-1a
gi|1490870|gb|AAB06176.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|4106358|gb|AAD02814.1| flap endonuclease 1 [Xenopus laevis]
gi|213623454|gb|AAI69765.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|213625072|gb|AAI69761.1| 5' nuclease xFEN1a [Xenopus laevis]
Length = 382
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 150/349 (42%), Gaps = 29/349 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGL----- 50
MGI GL L+ + P IKE + G VAVD +++ L R+ L
Sbjct: 1 MGIHGLAKLIADVA-PAAIKEHDIKSYFGRKVAVDASMCIYQ-FLIAVRQDGNTLQNEEG 58
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + +G+KP+ +FDG MK + KR+ R E E G
Sbjct: 59 ETTSHLMGMFYRTIRMVEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAG 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+F ++ V ++ E ++L + Y+ AP EA+A L + +V A TE
Sbjct: 119 EVENIEKFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG + ++ + + + N+ + G T + +++CIL G DY ++
Sbjct: 179 DMDALTFG-TPVLLRHLTASEAKKLPIQEFHLNRVIQDIGITHEQFVDLCILLGSDYCET 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLT--------FQHQR 282
+ G+G KRA LI + K+ D++I ++ VP + K + +
Sbjct: 238 IRGIGPKRAIDLIRQHKTIDEIIDNIDLKKYPVPENWLHKEAKHLFLEPEVVDTDITELK 297
Query: 283 VYDPKTEDIVHLSC-----ISDNIGNDLDFLAK---GIAIGDLDPFTQL 323
+P E +V C D I N LAK G G LD F ++
Sbjct: 298 WIEPDEEGLVAFMCGEKQFSEDRIRNGAKKLAKNRQGSTQGRLDDFFKV 346
>gi|451853401|gb|EMD66695.1| hypothetical protein COCSADRAFT_35197 [Cochliobolus sativus ND90Pr]
Length = 395
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 16/290 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L L++ P +K+ E G VA+D YS+L + + +
Sbjct: 1 MGIKHLYQLIEE-HTPEAVKKGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMSETGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E A A E + G
Sbjct: 60 TTSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAQAAAEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E Q+LK + YIVAP EA+AQ LA +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTKEHNAECQQLLKLMGIPYIVAPTEAEAQCATLAKGGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + +K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLTF-ASPILLRHLTFSEQRKEPILEIHLDKVLEGLEMDQKQFIDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYST---VSVPPFYEESFGKAVLTF 278
G+G A LI + K + V++H+K + +++P + F A L F
Sbjct: 239 KGIGPSTALKLIREHKDLEGVVEHIKSQSSKKLTIPDDW--PFADARLLF 286
>gi|323454359|gb|EGB10229.1| hypothetical protein AURANDRAFT_53007 [Aureococcus anophagefferens]
Length = 538
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 22/274 (8%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDT----YSWL---HKGALSCSRELCKG 49
MGI+GL P ++ ++ +K+ G +AVD YS+L G + +G
Sbjct: 1 MGIKGLFPYIRDNAPGAIVETSLKDYMGRRLAVDASMHLYSFLAAIRTGGDATHLTNSRG 60
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMK---IEQENKRARSRKENLARAIEC 106
TS H+ +R + G KP+ +FDG +K ++ ++ R+ +E LARA +
Sbjct: 61 EATS-HLQGFANRTLRMLEAGAKPVFVFDGAAPELKGKTLKGRSEAKRAAEEKLARARDA 119
Query: 107 ESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
+S + Y+ + ++ ++ ++L+ V + AP EA+A L +
Sbjct: 120 DSGATTEEVYKAASASTRVTRQHNDDVKRLLRLMGVPVVEAPGEAEASCVALVRHGACDF 179
Query: 167 VITEDSDLIPFGCSRIIFKM-DKFGQGVE-----FQCSMLQKNKDLSFGGF-TKQMLLEM 219
V+TED D + FG ++++ + D G + ++ + ++L G T ++
Sbjct: 180 VVTEDMDALTFGAAKMVKNLFDVEGARAKEKRPAYEIDLAAALRELGPRGLGTMAAFVDF 239
Query: 220 CILSGCDYLQSLPGMGLKRAHALISKFKSYDKVI 253
CIL GCDYL +PG+G A L+ S ++ +
Sbjct: 240 CILCGCDYLDHVPGVGPATAAKLLKSHASLERAV 273
>gi|388454741|ref|NP_001252879.1| flap endonuclease 1 [Macaca mulatta]
gi|402893159|ref|XP_003909769.1| PREDICTED: flap endonuclease 1 isoform 1 [Papio anubis]
gi|402893161|ref|XP_003909770.1| PREDICTED: flap endonuclease 1 isoform 2 [Papio anubis]
gi|75076152|sp|Q4R5U5.1|FEN1_MACFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|67970375|dbj|BAE01530.1| unnamed protein product [Macaca fascicularis]
gi|355566422|gb|EHH22801.1| Flap endonuclease 1 [Macaca mulatta]
gi|355752043|gb|EHH56163.1| Flap endonuclease 1 [Macaca fascicularis]
gi|380787489|gb|AFE65620.1| flap endonuclease 1 [Macaca mulatta]
gi|383413161|gb|AFH29794.1| flap endonuclease 1 [Macaca mulatta]
gi|384939550|gb|AFI33380.1| flap endonuclease 1 [Macaca mulatta]
Length = 380
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAHQLFLKPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|75775305|gb|AAI05256.1| Flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + E ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAMDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|294658624|ref|XP_460967.2| DEHA2F13882p [Debaryomyces hansenii CBS767]
gi|317374925|sp|Q6BLF4.2|FEN1_DEBHA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|202953266|emb|CAG89325.2| DEHA2F13882p [Debaryomyces hansenii CBS767]
Length = 379
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 18/269 (6%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K +K L G +A+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHAPEAFKEFQLKNLFGRKIAIDASMCLYQFLIAVRQAEGQQLTNDEGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L +KP+ +FDG +K + KR R+E + + + EG
Sbjct: 61 TTSHLSGMFYRTIRLVENSIKPVYVFDGKPPVLKGGELEKRLLRREEAIKQRENIKDEGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ V ++ E ++L+ V Y+ AP EA+AQ LA +V A +ED
Sbjct: 121 IEDMVRYEKRTVRVTREQNDEAKKLLELMGVPYVNAPCEAEAQCAELARGGKVFAAASED 180
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D I PF + + F + + +Q K L ++ +++CIL GCDY
Sbjct: 181 MDTICYQPPF-----LLRHLTFSEARKMPIDQIQYEKVLEALEMDRETFIDLCILLGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHL 256
+++ G+G A LI + S DK++++L
Sbjct: 236 CETIRGVGPVTAFKLIKEHGSLDKIVEYL 264
>gi|242091235|ref|XP_002441450.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
gi|317374865|sp|C5YUK3.1|FEN11_SORBI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|241946735|gb|EES19880.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
Length = 380
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +A+D +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGMETLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ +R L G+KP+ +FDG MK E+ KR R++ E G
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKEELAKRFSKREDATNDLKEAVEAG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A + ++ V ++ + ++L+ V + AP EA+A+ L + +V AV +E
Sbjct: 120 DKDAVEKLSKRTVKVTAQHNDDCKRLLRLMGVPVVEAPSEAEAECAALCKNDKVFAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG R + MD + + EF + + + +L+ F +++CIL GCD
Sbjct: 180 DMDSLTFGAPRFLRHLMDPSSKKIPVMEFDVAKVLEELELTMDQF-----IDLCILCGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
Y S+ G+G + A LI + S + ++++L +P P+ E
Sbjct: 235 YCDSIKGIGGQTALKLIRQHGSIESILENLNKDRYQIPEDWPYQE 279
>gi|78042574|ref|NP_001030285.1| flap endonuclease 1 [Bos taurus]
gi|61553249|gb|AAX46374.1| flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + E ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAMDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|341882587|gb|EGT38522.1| hypothetical protein CAEBREN_12338 [Caenorhabditis brenneri]
gi|341895701|gb|EGT51636.1| hypothetical protein CAEBREN_24192 [Caenorhabditis brenneri]
Length = 382
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 145/326 (44%), Gaps = 29/326 (8%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPT 52
MGI+GL ++ S + IK G VA+D Y +L S+ + T
Sbjct: 1 MGIKGLSQVIADNAPSAIKVNEIKAFFGRKVAIDASMCLYQFLIAVRQDGSQLQSEDGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R + G+KP+ +FDG MK + KR+ R E E + +G++
Sbjct: 61 TSHLMGMFYRTIRMIDNGIKPVYVFDGKPPDMKSGELEKRSERRAEAEKALTEAKEKGDA 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ +F ++ V ++ E+ +L + + AP EA+AQ L + +V TED
Sbjct: 121 KEAEKFERRLVKVTKQQNEEVKHLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDM 180
Query: 173 DLIPFGCSRIIFKM----DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
D + FG S ++ + K EF + + + LS F +++CIL GCDY
Sbjct: 181 DALTFGSSVLLRHLLAPESKKIPIKEFHLARVLEEMKLSEDEF-----IDLCILLGCDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY---- 284
++ G+G K+A LI + K+ + V++++ + PP + + +A F+ V
Sbjct: 236 GTIRGVGPKKAVELIRQHKNIETVLENIDQT--KYPPPEDWPYKRARELFREPEVTKGED 293
Query: 285 ------DPKTEDIVHLSCISDNIGND 304
+P E IV C N +
Sbjct: 294 VELTWKEPDVEGIVKFMCGDKNFSEE 319
>gi|242813984|ref|XP_002486279.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC
10500]
gi|218714618|gb|EED14041.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC
10500]
Length = 399
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR+ ++E E + G
Sbjct: 64 TTSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKLKGGELAKRSARKREAHEAHEEAKETGT 123
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 124 AEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 183
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L G ++ +++CIL GCDYL+ +
Sbjct: 184 MDTLCFEAP-ILLRHLTFSEQRKEPIQEIHLDKALEGLGMDRKQFIDLCILLGCDYLEPI 242
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ ++
Sbjct: 243 PKVGPNTALKLIREHGSLEKVVEAIE 268
>gi|5262584|emb|CAB45733.1| hypothetical protein [Homo sapiens]
Length = 672
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 175 IPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ FGC ++I KMD+FG G+E + L + L FT++ MCILSGCDYL SL G+
Sbjct: 1 LAFGCKKVILKMDQFGNGLEIDQARLGMCRQLG-DVFTEEKFRYMCILSGCDYLSSLRGI 59
Query: 235 GLKRAHALISKFKSYD--KVIK---HLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
GL +A ++ + D KVIK H ++VP Y F +A TF +Q V+DP
Sbjct: 60 GLAKACKVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKR 119
Query: 290 DIVHLSCISDNIGNDL---------DFLAKGIAIGDLDPFTQLPFQEVSD 330
++ L+ D++ + D +A IA+G+ D T F+++ D
Sbjct: 120 KLIPLNAYEDDVDPETLSYAGQYVDDSIALQIALGNKDINT---FEQIDD 166
>gi|296218462|ref|XP_002755459.1| PREDICTED: flap endonuclease 1 [Callithrix jacchus]
Length = 380
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E ++L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEQEVEKFTKRLVKVTKQHNDECKRLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASESKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|258573689|ref|XP_002541026.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
gi|237901292|gb|EEP75693.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
Length = 413
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR ++E + E + G
Sbjct: 78 TTSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRIARKQEAAEQHEEAKETGT 137
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 138 TEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYINAPTEAEAQCAVLARAGKVYAAASED 197
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L G ++ +++CIL GCDYL +
Sbjct: 198 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLGMDRKTFVDLCILLGCDYLDPI 256
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV++ +K
Sbjct: 257 PKVGPNTALKLIRDHGSLEKVVEAMK 282
>gi|2674207|gb|AAB88707.1| flap endonuclease 1 [Xenopus laevis]
gi|115528353|gb|AAI24978.1| Fen1-A protein [Xenopus laevis]
Length = 382
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 29/349 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGL----- 50
MGI GL L+ + P IKE + G VA+D +++ L R+ L
Sbjct: 1 MGIHGLAKLIADVA-PAAIKEHDIKSYFGRKVAIDASMCIYQ-FLIAVRQDGNTLQNEEG 58
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + +G+KP+ +FDG MK + KR+ R E E G
Sbjct: 59 ETTSHLMGMFYRTIRMVEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAG 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+F ++ V ++ E ++L + Y+ AP EA+A L + +V A TE
Sbjct: 119 EVENIEKFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG + ++ + + + N+ + G T + +++CIL G DY ++
Sbjct: 179 DMDALTFG-TPVLLRHLTASEAKKLPIQEFHLNRVIQDIGITHEQFVDLCILLGSDYCET 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLT--------FQHQR 282
+ G+G KRA LI + K+ D++I ++ VP + K + +
Sbjct: 238 IRGIGPKRAIDLIRQHKTIDEIIDNIDLKKYPVPENWLHKEAKHLFLEPEVVDTDITELK 297
Query: 283 VYDPKTEDIVHLSC-----ISDNIGNDLDFLAK---GIAIGDLDPFTQL 323
+P E +V C D I N LAK G G LD F ++
Sbjct: 298 WIEPDEEGLVAFMCGEKQFSEDRIRNGAKKLAKNRQGSTQGRLDDFFKV 346
>gi|71023659|ref|XP_762059.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
gi|74699231|sp|Q4P1V1.1|FEN1_USTMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46101624|gb|EAK86857.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
Length = 374
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 18/284 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI+GL L+ S P IKE+E G VA+D L++ ++ + + +
Sbjct: 1 MGIKGLTALI-SDEAPGAIKEMEIKTYFGRKVAIDASMSLYQFLIAVRQNDGQQLMTESG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + YG+KP+ +FDG +K E KR R+E + E +
Sbjct: 60 ETTSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLQKRFGRREEAREQEEEQKDVA 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
++ + ++ V + E+ +LK + ++AP EA+AQ LA + +V A +E
Sbjct: 120 DAEKMDQLARRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG + I+ K + + + K L T +++CIL GCDYL
Sbjct: 180 DMDTLTFG-TPILLKHLTASEQKKLPVHQVDLAKALEGLQMTMAQFIDLCILLGCDYLDP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK---YSTVSVP---PFYE 268
+ G+G K A LI + K+ + V+ HLK +V +P PF E
Sbjct: 239 IKGIGPKTALKLIREHKTLENVVHHLKEDGKKSVQIPDHWPFQE 282
>gi|388854784|emb|CCF51677.1| probable DNA repair endonuclease rad2 [Ustilago hordei]
Length = 374
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 17/304 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI+GL L+ S P I+E+E G VA+D L++ ++ + + +
Sbjct: 1 MGIKGLTALI-SDEAPGAIREMEIKTYFGRKVAIDASMSLYQFLIAVRQNDGQQLMTESG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + YG+KP+ +FDG +K E KR R+E + E +
Sbjct: 60 ETTSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLQKRFGRREEAREQQEEQKDVA 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ + ++ V + E+ +LK + ++AP EA+AQ LA + +V A +E
Sbjct: 120 DVEKMDQLARRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG I+ K + + + K L G +++CIL GCDYL
Sbjct: 180 DMDTLTFGTP-ILLKHLTASEQKKLPVHQVDLPKALEGLGMDMAQFIDLCILLGCDYLDP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK---YSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
+ G+G K A LI + K+ +KV++H K +V +P + F +A F++ V K
Sbjct: 239 IKGIGPKTALKLIREHKTLEKVVEHFKEEAKKSVQIPEHW--PFQEARKIFENPHVQKGK 296
Query: 288 TEDI 291
D+
Sbjct: 297 DLDL 300
>gi|296089863|emb|CBI39682.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +A+D +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ R L G+KP+ +FDG +K ++ KR R + E G
Sbjct: 60 EVTSHLQGMFSRTIRLLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N +F ++ V ++ + ++L+ V I AP EA+AQ L S +V AV +E
Sbjct: 120 NKEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG + + MD + + EF + + + +L+ F +++CILSGCD
Sbjct: 180 DMDSLTFGAPKFLRHLMDPSSRKIPVMEFDITKILEELNLTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
Y S+ G+G + A LI + S + +++++ +P P+ E
Sbjct: 235 YCDSIRGIGGQTALKLIRQHGSIENILENINRERYQIPDDWPYQE 279
>gi|317376210|sp|C4JDR3.2|FEN1_UNCRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGETTSHLMGLFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR ++E + E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRIARKQEAAEQHEEAKETGTTEDVEKFSRRTVRVTREHNEECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK + YI AP EA+AQ LA + +V A +ED D + F S I+ + F + +
Sbjct: 143 KLLKLMGIPYINAPTEAEAQCAVLARAGKVYAAASEDMDTLCFD-SPILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ ++ L G ++ +++CIL GCDYL +P +G A LI S +KV++
Sbjct: 202 EPILEIHLDRVLEGLGMDRKTFVDLCILLGCDYLDPIPKVGPNTALKLIRDHGSLEKVVE 261
Query: 255 HLK 257
+K
Sbjct: 262 AMK 264
>gi|261244970|ref|NP_001159668.1| flap endonuclease 1 [Ovis aries]
gi|317376193|sp|C8BKD0.1|FEN1_SHEEP RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256665367|gb|ACV04829.1| flap structure-specific endonuclease 1 [Ovis aries]
Length = 380
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAETEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|410924704|ref|XP_003975821.1| PREDICTED: probable flap endonuclease 1 homolog [Takifugu rubripes]
Length = 297
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 40/210 (19%)
Query: 68 HYGVKPILIFDG-------GLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQ 120
+ +KP+ +FDG +L + E R+ +RK G +S+S
Sbjct: 64 EHDIKPVFVFDGRPPGEKRAVLEKRAESAGWRSPNRK------------GTASSS----- 106
Query: 121 KAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCS 180
+ +Q+LK V I AP +A+A +L V+AV +ED D +PFG S
Sbjct: 107 ---------TRDCLQLLKLIGVPVIQAPGDAEALCAWLVKEGTVDAVASEDMDTLPFGAS 157
Query: 181 RIIFKMD--KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
+I +++ K G+ +E+ S L + ++ Q +++CIL GCDY + + G+G KR
Sbjct: 158 ILIRQLNSKKDGEVIEYSLSKLLERLQIN-----HQEFVDLCILLGCDYCEKICGLGPKR 212
Query: 239 AHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
A LI K ++ + VI H+ T VP F++
Sbjct: 213 ALTLIQKHRTIENVILHVNRKTHPVPLFWK 242
>gi|4758356|ref|NP_004102.1| flap endonuclease 1 [Homo sapiens]
gi|114637922|ref|XP_001149352.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan troglodytes]
gi|297688500|ref|XP_002821719.1| PREDICTED: flap endonuclease 1 isoform 1 [Pongo abelii]
gi|297688502|ref|XP_002821720.1| PREDICTED: flap endonuclease 1 isoform 2 [Pongo abelii]
gi|332836633|ref|XP_001149490.2| PREDICTED: flap endonuclease 1 isoform 4 [Pan troglodytes]
gi|397516600|ref|XP_003828512.1| PREDICTED: flap endonuclease 1 isoform 1 [Pan paniscus]
gi|397516602|ref|XP_003828513.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan paniscus]
gi|410045196|ref|XP_003951955.1| PREDICTED: flap endonuclease 1 [Pan troglodytes]
gi|426368750|ref|XP_004051365.1| PREDICTED: flap endonuclease 1 isoform 1 [Gorilla gorilla gorilla]
gi|426368752|ref|XP_004051366.1| PREDICTED: flap endonuclease 1 isoform 2 [Gorilla gorilla gorilla]
gi|426368754|ref|XP_004051367.1| PREDICTED: flap endonuclease 1 isoform 3 [Gorilla gorilla gorilla]
gi|729475|sp|P39748.1|FEN1_HUMAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNase
IV; AltName: Full=Flap structure-specific endonuclease
1; AltName: Full=Maturation factor 1; Short=MF1;
Short=hFEN-1
gi|21668123|gb|AAM74238.1|AF523117_1 flap structure-specific endonuclease 1 [Homo sapiens]
gi|642090|gb|AAA91331.1| endonuclease [Homo sapiens]
gi|704377|gb|AAB32522.1| DNase IV=nuclear 42 kda 5' -> 3' exonuclease [human, HeLa cells,
Peptide, 380 aa]
gi|3169155|gb|AAC23394.1| FEN1_HUMAN [Homo sapiens]
gi|3980293|emb|CAA54166.1| flap endonuclease-1 [Homo sapiens]
gi|12653113|gb|AAH00323.1| Flap structure-specific endonuclease 1 [Homo sapiens]
gi|49168608|emb|CAG38799.1| FEN1 [Homo sapiens]
gi|54695918|gb|AAV38331.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|60813555|gb|AAX36265.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|60813577|gb|AAX36266.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355090|gb|AAX41100.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355958|gb|AAX41194.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61362985|gb|AAX42314.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|119594378|gb|EAW73972.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|189053461|dbj|BAG35627.1| unnamed protein product [Homo sapiens]
gi|208968397|dbj|BAG74037.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|410220904|gb|JAA07671.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410267972|gb|JAA21952.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410301536|gb|JAA29368.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410335329|gb|JAA36611.1| flap structure-specific endonuclease 1 [Pan troglodytes]
Length = 380
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|150866777|ref|XP_001386488.2| hypothetical protein PICST_33791 [Scheffersomyces stipitis CBS
6054]
gi|317376214|sp|A3M056.2|FEN1_PICST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|149388033|gb|ABN68459.2| Exodeoxyribonuclease [Scheffersomyces stipitis CBS 6054]
Length = 381
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 10/265 (3%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPGAFKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNESGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + + G
Sbjct: 61 TTSHLSGMFYRTIRMVENNIKPVYVFDGKPPVLKGGELEKRLLKREEAQKQIDSIKDTGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V +S E ++L+ + Y+ AP EA+AQ LA + +V A +ED
Sbjct: 121 VAEVMKFEKRLVRVSREQNDEAKKLLELMGIPYVNAPCEAEAQCAELARTGKVFAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + ++ + F + + + + ++ ++ TK ++MCIL GCDY +++
Sbjct: 181 MDTLCYEPPYLLRHLT-FAEARKMPINQITYSEAIAGLEMTKPQFIDMCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL 256
G+G A+ LI + S +K+I+H+
Sbjct: 240 KGVGPVTAYKLIKEHGSLEKIIEHI 264
>gi|17510005|ref|NP_491168.1| Protein CRN-1 [Caenorhabditis elegans]
gi|75023012|sp|Q9N3T2.1|FEN1_CAEEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
gi|31747251|gb|AAP57297.1| cell death-related nuclease 1 [Caenorhabditis elegans]
gi|373220153|emb|CCD72553.1| Protein CRN-1 [Caenorhabditis elegans]
Length = 382
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 152/321 (47%), Gaps = 24/321 (7%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSC----SRELCKGLPT 52
MGI+GL ++ S + +K G VA+D L++ ++ S+ + T
Sbjct: 1 MGIKGLSQVIADNAPSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ ++R + GVKP+ +FDG MK + KR+ R E E + +G+
Sbjct: 61 TSHLMGMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALTEAKEKGDV 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ +F ++ V ++ E ++L + + AP EA+AQ L + +V +TED
Sbjct: 121 KEAEKFERRLVKVTKQQNDEAKRLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTVTEDM 180
Query: 173 DLIPFGCSRIIFK--MDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + FG S ++ + + + + EF S+ + LS F +++CIL GCDY
Sbjct: 181 DALTFG-STVLLRHFLAPVAKKIPIKEFNLSLALEEMKLSVEEF-----IDLCILLGCDY 234
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
++ G+G K+A LI + K+ + +++++ + PP + + +A F + V P+
Sbjct: 235 CGTIRGVGPKKAVELIRQHKNIETILENIDQN--KYPPPEDWPYKRARELFLNPEVTKPE 292
Query: 288 TEDIVHLSCISDNIGNDLDFL 308
V L+ ++ + FL
Sbjct: 293 E---VELTWKEADVEGVIQFL 310
>gi|75057714|sp|Q58DH8.1|FEN1_BOVIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|61553325|gb|AAX46387.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61553832|gb|AAX46466.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61554710|gb|AAX46602.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|296471658|tpg|DAA13773.1| TPA: flap endonuclease 1 [Bos taurus]
Length = 380
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + E ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|410722033|ref|ZP_11361349.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
gi|410597930|gb|EKQ52534.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
Length = 328
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 132/280 (47%), Gaps = 18/280 (6%)
Query: 1 MGIQGLLPLLKSIMIP--IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP------- 51
MG++ K I+ P I ++L+G VA+D + +++ LS R++ G P
Sbjct: 1 MGVK-----FKDIVSPEEIRFEDLDGKVVALDAANVIYQ-FLSSIRQI-DGTPLKDQNGR 53
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H ++R + L G+KPI +FDG +K E + KR ++E+ + E EG
Sbjct: 54 ITSHFSGILYRTSSLVEKGIKPIYVFDGQSSALKKETQQKRREIKEESERKWKEALEEGR 113
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ +SP I +++K + YI A E +AQ +++ V ++D
Sbjct: 114 LDDARKFAVRSSRMSPEIVEGSKKLIKLMGIPYIQAKGEGEAQASYMVARGDAWCVASQD 173
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG R++ + G + +++ K L T++ L+++ I+ G D+ Q +
Sbjct: 174 YDCMLFGAPRMVKNLTI--SGTQNTPELIELEKILGTLDITREQLVDLAIMVGTDFNQGI 231
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESF 271
G+G K+ LI K ++++ L P + F
Sbjct: 232 KGIGAKKGLKLIEKHGDIFQILEKLDIQLDVDPHILRDMF 271
>gi|440901464|gb|ELR52399.1| Flap endonuclease 1 [Bos grunniens mutus]
Length = 380
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + E ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|61365237|gb|AAX42675.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61365242|gb|AAX42676.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61369466|gb|AAX43341.1| flap structure-specific endonuclease 1 [synthetic construct]
Length = 381
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|323456781|gb|EGB12647.1| hypothetical protein AURANDRAFT_4733, partial [Aureococcus
anophagefferens]
Length = 238
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 26/255 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPT-SRHIDYC 59
MG+QGL LL I ++ LE +A+D WL + + + +G P + H+
Sbjct: 1 MGVQGLWKLLAPCGRRISVETLEHTTLAIDVSIWLTQFVKAMRDD--EGRPIRNAHLIGT 58
Query: 60 MHRVNLLRHYGVKPILIFDGGLLPMKI----EQENKRARSRKENLARAIECESEGNSSAS 115
+ RV L ++GV+P+ +FDGG+ +K +++ +R ++R + A ++ E +S
Sbjct: 59 LRRVAKLLYHGVRPVFVFDGGVPVVKARLIRQRQMRREKNRDDREAASLRREMSRSS--- 115
Query: 116 YEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLI 175
+ A ++ + + + +L+ V Y+VAP EA+AQ L + E V+T+DSD
Sbjct: 116 ----RDADSVTEDMREDTMHLLRLLGVPYVVAPMEAEAQCAALEAAGLCEGVVTDDSDAF 171
Query: 176 PFGCSRI---IFKMDKFGQG-VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
FG R+ IF K+ + C+ +DL G + + +L G DY +
Sbjct: 172 CFGARRVYKNIFDDRKYVEAYYASDCA-----RDLRLG---RDEFCALALLLGGDYDNGV 223
Query: 232 PGMGLKRAHALISKF 246
G+G+ A ++ F
Sbjct: 224 AGVGVVNAMEVLQAF 238
>gi|403255047|ref|XP_003920260.1| PREDICTED: flap endonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255049|ref|XP_003920261.1| PREDICTED: flap endonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASESKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPTKYPVPENWLHR--EAHQLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|395545349|ref|XP_003774565.1| PREDICTED: flap endonuclease 1 [Sarcophilus harrisii]
Length = 380
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 154/350 (44%), Gaps = 37/350 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNE--E 57
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
G TS H+ +R + G+KP+ +FDG +K + KR R E + + +
Sbjct: 58 GEATS-HLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRGERRAEAEKQLQQAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G + +F ++ V ++ E ++L+ + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEEEAEKFAKRLVKVTKQHNEECKRLLRLMGIPYLEAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G T++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQGLGLTQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD--- 285
+S+ G+G KRA LI + KS +++++ L VP + +A F V D
Sbjct: 236 ESIRGIGPKRAMDLIQQHKSIEEILRRLDPKKYPVPDNWLHK--EAQRLFLEPEVLDAEA 293
Query: 286 -------PKTEDIVHLSCI-----SDNIGNDLDFLAK---GIAIGDLDPF 320
P E +V C D + N + L+K G G LD F
Sbjct: 294 VELKWSEPDEEGLVEFMCGEKQFNEDRVRNAVKRLSKSRQGSTQGRLDDF 343
>gi|212544870|ref|XP_002152589.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC
18224]
gi|210065558|gb|EEA19652.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC
18224]
Length = 411
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 4/247 (1%)
Query: 11 KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYG 70
K ++ I+I E +++ YS+L + + + T+ H+ +R + G
Sbjct: 38 KVAIVRINIAEYR---ISMSIYSFLIAVRSDGQQLMSEAGETTSHLMGMFYRTLRIVDNG 94
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+KP+ +FDG MK + KR+ ++E E + G + +F ++ V ++
Sbjct: 95 IKPLYVFDGAPPKMKGGELAKRSARKREAHEAHEEAKETGTAEDMEKFSRRTVRVTREHN 154
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
E ++LK V YI AP EA+AQ LA + +V A +ED D + F I+ + F
Sbjct: 155 EECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFS 213
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYD 250
+ + + +K L G +++CIL GCDYL+ +P +G A LI + S +
Sbjct: 214 EQRKEPILEIHLDKALEGLGMDMAQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLE 273
Query: 251 KVIKHLK 257
KV++ ++
Sbjct: 274 KVVEAIE 280
>gi|332249905|ref|XP_003274094.1| PREDICTED: flap endonuclease 1 isoform 1 [Nomascus leucogenys]
gi|332249907|ref|XP_003274095.1| PREDICTED: flap endonuclease 1 isoform 2 [Nomascus leucogenys]
gi|441604271|ref|XP_004087863.1| PREDICTED: flap endonuclease 1 [Nomascus leucogenys]
Length = 380
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A
Sbjct: 117 AGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHHLFLEPEVLDPES 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|50556476|ref|XP_505646.1| YALI0F20042p [Yarrowia lipolytica]
gi|74632421|sp|Q6C116.1|FEN1_YARLI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49651516|emb|CAG78455.1| YALI0F20042p [Yarrowia lipolytica CLIB122]
Length = 389
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 21/277 (7%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL + + IK G VA+D L++ ++ + + L
Sbjct: 1 MGIKGLNKLLMEHCPAALRSSEIKNFGGRKVAIDASMSLYQFVIAVRQADGQQLTNENGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLAR------AIE 105
T+ H+ +R + G+KP+ +FDG +K + KR R+E L + +E
Sbjct: 61 TTSHLMGMFYRTLRMVDNGIKPVYVFDGKPPVLKSGELAKRKERREEALKKIEELKQQVE 120
Query: 106 CESEGNSSASYE-----FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV 160
EG + + F ++ V ++P E ++L + + AP EA+AQ LA
Sbjct: 121 DGEEGEETKEAQEDVTRFEKRTVRVTPEQNDEAKKLLTLMGIPIVEAPCEAEAQCAKLAE 180
Query: 161 SKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMC 220
+ +V A +ED D + FG S ++ + F + + S + K L T +++C
Sbjct: 181 AGKVYAAASEDMDTLCFG-SPVLLRHLTFSEAKKMPISEINFAKILEGLEMTHAQFIDLC 239
Query: 221 ILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
IL GCDY ++ G+G + A L+ + S +K+++H++
Sbjct: 240 ILLGCDYADTIRGVGPQTALKLMKEHGSLEKIVEHIE 276
>gi|344303968|gb|EGW34217.1| hypothetical protein SPAPADRAFT_148774 [Spathaspora passalidarum
NRRL Y-27907]
Length = 377
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 10/265 (3%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K S +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPSAYKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNEDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L +KP+ +FDG +K + KR + R+E + + EG
Sbjct: 61 TTSHLSGLFYRTIRLVENNIKPVYVFDGKPPVLKGGELEKRLQRREEAQKQMDSIKDEGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V +S E ++L+ + + AP EA+AQ LA +V A +ED
Sbjct: 121 VAEVMKFEKRLVRVSRQQNDEARKLLELMGIPIVNAPCEAEAQCAELARGGKVFAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + ++ + F + + + ++ ++ TK+ +++CIL GCDY +++
Sbjct: 181 MDTLCYEPPYLLRHLT-FAEARKMPIDQITYSEAIAGLDMTKEQFIDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL 256
G+G A LI + S DK+++++
Sbjct: 240 KGVGPVTAFKLIKEHGSLDKIVEYI 264
>gi|348540973|ref|XP_003457961.1| PREDICTED: flap endonuclease 1-like [Oreochromis niloticus]
Length = 380
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 13/283 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE + G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-QAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAQAQEIGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V YI AP EA+A L + +V A TED
Sbjct: 120 QENIDKFTKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + I+ + + + ++ L G T + +++CIL GCDY ++
Sbjct: 180 MDGLTFG-TNILLRHLTASEAKKLPIQEFHFSRILQDIGLTNEQFIDLCILLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEESFG 272
G+G KRA LI + S +++++++ + P Y+E+ G
Sbjct: 239 KGIGPKRAIDLIKQHGSIEEILENIDSNKHPAPEDWLYKEARG 281
>gi|449435964|ref|XP_004135764.1| PREDICTED: flap endonuclease 1-like [Cucumis sativus]
Length = 377
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 29/288 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +A+D +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKGMKEQKFEAYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECE 107
+ H+ +R L G+KP+ +FDG +K ++ KR R E+LA AIE
Sbjct: 60 EVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEV- 118
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
GN +F ++ V ++ + ++L+ V I AP EA+AQ L +V AV
Sbjct: 119 --GNKDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAV 176
Query: 168 ITEDSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ED D + FG R + MD + + EF+ + + + +L+ F +++CILS
Sbjct: 177 ASEDMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQF-----IDLCILS 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
GCDY ++ G+G A LI + S + +++++ +P P+ E
Sbjct: 232 GCDYCDNIRGIGGLTALKLIRQHGSIESILENINKERYQIPDDWPYKE 279
>gi|379005480|ref|YP_005261152.1| flap structure-specific endonuclease [Pyrobaculum oguniense TE7]
gi|375160933|gb|AFA40545.1| flap structure-specific endonuclease [Pyrobaculum oguniense TE7]
Length = 346
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 23/253 (9%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHYGV 71
++ L G CVA+D Y+ L++ S + G P + HI +R L G+
Sbjct: 20 LEALAGRCVALDAYNALYQFLASIRQ--PDGTPLMDRAGRITSHISGLFYRTINLMEAGI 77
Query: 72 KPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECESEGNSSASYEFYQKAVDISPS 128
KP+ +FDG K+ + +R R+++ E L RAI+ EG ++ ++A+ ++
Sbjct: 78 KPVYVFDGKPPEFKLAEIEERRRAKEKATEELVRAIK---EGRRDEVAKYAKRAIFLTNE 134
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM-- 186
+ + ++L V ++ AP E +AQ ++A AV ++D D + FG R++ +
Sbjct: 135 MVEDAKRLLTYMGVPWVQAPSEGEAQAAYMARRGHCWAVGSQDYDSLLFGSPRLVRNLAA 194
Query: 187 ---DKFG-QGVEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
K G + VE +++ + L S +++ L+++ IL G DY +PG+G +RA
Sbjct: 195 SPKRKVGDEVVELSPEIIELDTVLKSLRLRSREQLIDLAILLGTDYNPDGVPGIGPQRAL 254
Query: 241 ALISKFKSYDKVI 253
LI +F S +K++
Sbjct: 255 KLIWEFGSLEKLL 267
>gi|408381751|ref|ZP_11179299.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
gi|407815682|gb|EKF86252.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
Length = 328
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 123/252 (48%), Gaps = 18/252 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIK--ELEGCCVAVDTYSWLHKGALSCSRELCKGLP------- 51
MG++ K I+ P IK +L+G VA+D + +++ LS R++ G P
Sbjct: 1 MGVK-----FKDIVSPEEIKFEDLDGKVVALDAANVIYQ-FLSSIRQI-DGTPLKDQNGR 53
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H ++R + L G+KPI +FDG +K E + KR ++E+ R E EG
Sbjct: 54 ITSHFSGILYRTSSLVEKGIKPIYVFDGQSSALKKETQQKRREIKEESERRWKEALEEGR 113
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ + P I +++K + YI A E +AQ +++ V ++D
Sbjct: 114 LDDARKFAVRSSRMFPEIVEGSKKLIKLMGIPYIQAKGEGEAQASYMVAQGDAWCVASQD 173
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG R++ + G + +++ NK L T++ L+++ I+ G D+ Q +
Sbjct: 174 YDCMLFGAPRMVKNLTI--SGTQKTPEIIELNKILENLSITREQLVDLAIMVGTDFNQGI 231
Query: 232 PGMGLKRAHALI 243
G+G K+ LI
Sbjct: 232 KGIGAKKGLKLI 243
>gi|67470614|ref|XP_651270.1| FEN-1 nuclease [Entamoeba histolytica HM-1:IMSS]
gi|317374901|sp|C4M6G8.1|FEN1_ENTHI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56467989|gb|EAL45884.1| FEN-1 nuclease, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710440|gb|EMD49517.1| Flap endonuclease, putative [Entamoeba histolytica KU27]
Length = 376
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 33/304 (10%)
Query: 1 MGIQGLLPLLKSI----MIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL------ 50
MGI+GL LL M I + G +A+D S L +S R+
Sbjct: 1 MGIKGLSKLLARYAPKSMKEGKIDQYSGRVIAIDA-SILVYQFISAVRDTTGATMVDEFG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKR---ARSRKENLARAIECE 107
T+ HI +R L G+KPI +FDG MK + +KR A+ +E L +A+E
Sbjct: 60 ETTSHIIGTFYRTIKLIESGIKPIYVFDGKPPEMKDGELHKRKENAQKAQEQLDKALE-- 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
EG+ + + ++ ++ + E+ ++L+ + I A EA+ L + + A
Sbjct: 118 -EGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPCIEANCEAEGTCAALVKAGKCYAT 176
Query: 168 ITEDSDLIPFGCSRIIFKM----DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
TED D + G ++ K +K E+ S + L GFT + +++CIL
Sbjct: 177 ATEDMDALTLGSEHVVRKFSANDNKKDPIREYSLSSI-----LEETGFTMEQFIDLCILL 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL--KYSTVSVPPFYEESFGKAVLTFQHQ 281
GCDY +++ G+G A LI ++KS + +++HL KY VP ++ + +A F H
Sbjct: 232 GCDYCETIKGVGPITAFELIQQYKSIENILQHLSDKY---KVPENWK--YKEARELFLHP 286
Query: 282 RVYD 285
V D
Sbjct: 287 DVAD 290
>gi|340052549|emb|CCC46830.1| putative flap endonuclease-1 (FEN-1), fragment [Trypanosoma vivax
Y486]
Length = 393
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 15/277 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCC-----VAVDTYSWLHKGALSCSR-------ELCK 48
MGI GL LL P IKE E C +A+D +++ ++ EL
Sbjct: 1 MGILGLSKLLYD-KTPSAIKEQELQCYFGRRIAIDASMAIYQFLIALRSFQDGQGVELTN 59
Query: 49 GL-PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE 107
+ + H++ R + G++PI +FDG +K ++ R + + + + + +
Sbjct: 60 DMGEVTSHLNGLFFRTLRMVDEGLRPIYVFDGKAPTLKSKELQNRRQKADDAIQKFKKAQ 119
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
EG++ + ++ V ++ E ++L+ + + AP EA+AQ L + AV
Sbjct: 120 EEGDAEMMEKMGKRTVRLTQEQMEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAWAV 179
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + FG I+ + + + + + + L G T + +++CIL GCDY
Sbjct: 180 GTEDMDALTFGAP-IMLRHLTYSEAKKRPIAEFHLDDILQTSGMTMEQFVDLCILLGCDY 238
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
+ +PG+G +A I KF S + I+ L + VP
Sbjct: 239 VPKIPGIGPHKAWEGIKKFHSIEAFIESLDSAKHVVP 275
>gi|224050601|ref|XP_002192880.1| PREDICTED: flap endonuclease 1 [Taeniopygia guttata]
Length = 386
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 17/276 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +GA E +
Sbjct: 1 MGIHGLAKLIADVA-PGAIRENDIKAYFGRKVAIDASMSIYQFLIAVRQGADVLQNEDGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR R E E +
Sbjct: 60 ---TTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQE 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G ++ ++ V ++P E ++L + Y+ AP EA+A L + +V A
Sbjct: 117 AGEEENIEKYSKRLVKVTPQHTQECKKLLTLMGIPYVEAPGEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + N+ L T + +++CIL GCDY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASETKKLPIQEFHLNRILQDLQLTWEQFVDLCILLGCDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G KRA LI + KS +++++ L +P
Sbjct: 236 ASIRGIGPKRAVELIREHKSIERIVQQLDTKKYPLP 271
>gi|167391034|ref|XP_001739610.1| Flap endonuclease 1-A [Entamoeba dispar SAW760]
gi|317374900|sp|B0EN90.1|FEN1_ENTDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|165896655|gb|EDR24004.1| Flap endonuclease 1-A, putative [Entamoeba dispar SAW760]
Length = 376
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 33/304 (10%)
Query: 1 MGIQGLLPLLKSI----MIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL------ 50
MGI+GL LL M I + G +A+D S L +S R+
Sbjct: 1 MGIKGLSKLLARYAPKSMKEGKIDQYSGRVIAIDA-SILVYQFISAVRDTTGATMVDEFG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKR---ARSRKENLARAIECE 107
T+ HI +R L G+KP+ +FDG MK + NKR A+ +E L +A+E
Sbjct: 60 ETTSHIIGTFYRTIKLIESGIKPVYVFDGKPPEMKDGELNKRKENAQKAQEQLDKALE-- 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
EG+ + + ++ ++ + E+ ++L+ + + A EA+ L + + A
Sbjct: 118 -EGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPCVEANCEAEGTCAALVKAGKCYAT 176
Query: 168 ITEDSDLIPFGCSRIIFKM---DKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
TED D + G ++ K D + + E+ S + L GF+ + +++CIL
Sbjct: 177 ATEDMDALTLGSEYVVRKFSASDNKKEPIREYSLSSI-----LEETGFSMEQFIDLCILL 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL--KYSTVSVPPFYEESFGKAVLTFQHQ 281
GCDY ++ G+G A LI ++KS + V+KHL KY VP ++ + +A F H
Sbjct: 232 GCDYCDTIKGVGPITAFELIQQYKSIENVLKHLSDKY---KVPENWK--YKEARELFLHP 286
Query: 282 RVYD 285
V D
Sbjct: 287 DVAD 290
>gi|317374921|sp|B6QT52.2|FEN1_PENMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSDGQQLMSEAGETTSHLMGMFYRTLRIVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG MK + KR+ ++E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKMKGGELAKRSARKREAHEAHEEAKETGTAEDMEKFSRRTVRVTREHNEECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK V YI AP EA+AQ LA + +V A +ED D + F I+ + F + +
Sbjct: 143 KLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ +K L G +++CIL GCDYL+ +P +G A LI + S +KV++
Sbjct: 202 EPILEIHLDKALEGLGMDMAQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AIE 264
>gi|46138549|ref|XP_390965.1| hypothetical protein FG10789.1 [Gibberella zeae PH-1]
gi|408391605|gb|EKJ70977.1| hypothetical protein FPSE_08836 [Fusarium pseudograminearum CS3096]
Length = 395
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKQLFQIIKE-EAPDAIKESEIKNQFGRKVAIDASMSIYSFLIAVRSEGQQLTNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ + ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDIEKFSRRTVRVTREHNADCQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + ++ +K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFNTP-ILLRHLTFSEQRKEPIQEIRLDKVLEGLNMERKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A +I S +KV++ ++
Sbjct: 239 PKVGPSTALKMIRDHGSLEKVVEAME 264
>gi|13506617|gb|AAK01853.1| flap endonuclease-1 [Mus musculus]
Length = 378
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNE--E 57
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
G TS M + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 58 GETTSL---MGMFYRTIRMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 114
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 115 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 174
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 175 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 233
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 234 ESIRGIGAKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVVDPES 291
Query: 289 EDI 291
++
Sbjct: 292 VEL 294
>gi|357441987|ref|XP_003591271.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480319|gb|AES61522.1| Flap endonuclease 1a [Medicago truncatula]
Length = 369
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ R L G+KP+ +FDG MK ++ KR R E A E N
Sbjct: 46 VTSHLQGMFARTIRLLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEADN 105
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ + ++L+ V + AP EA+AQ L + +V AV +ED
Sbjct: 106 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASED 165
Query: 172 SDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + FG + + MD + + EF + + + DL+ F +++CILSGCDY
Sbjct: 166 MDSLTFGAPKFLRHLMDPSSKKIPVMEFDVAKILEELDLTMDQF-----IDLCILSGCDY 220
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
++ G+G A LI + S +K+++++ VP P+ E
Sbjct: 221 CDNIRGIGGMTALKLIRQHGSIEKILENISKERYQVPDDWPYQE 264
>gi|18312112|ref|NP_558779.1| flap endonuclease-1 [Pyrobaculum aerophilum str. IM2]
gi|28380018|sp|Q8ZYN2.1|FEN_PYRAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|18159543|gb|AAL62961.1| DNA endonuclease rad2 homolog [Pyrobaculum aerophilum str. IM2]
Length = 346
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 19/288 (6%)
Query: 1 MGIQGLLPLL-KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------T 52
MG+ L L+ K + + ++ L G C+A+D Y+ L++ S + G P
Sbjct: 1 MGVTELGKLIGKEVRREVKLESLSGKCIALDAYNALYQFLASIRQ--PDGTPLMDRAGRI 58
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R L G++P+ +FDG K+ + +R ++R++ + + EG
Sbjct: 59 TSHLSGLFYRTINLLEAGIRPVYVFDGKPPEFKLAEIEERRKTREKAMEEVLRAIKEGRR 118
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
++ ++AV I+ + E ++L V ++ AP E +AQ ++A AV ++D
Sbjct: 119 EDVAKYAKRAVFITSEMVDEAKRLLSYMGVPWVQAPSEGEAQAAYMARKGHCWAVGSQDY 178
Query: 173 DLIPFGCSRIIFKM-----DKFGQGV-EFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGC 225
D + FG +++ + K G+ V E +++ + L + ++ L+++ IL G
Sbjct: 179 DSLLFGSPKLVRNLAVSPKRKIGEEVIELTPEIIELDAVLRALRLKNREQLIDLAILLGT 238
Query: 226 DY-LQSLPGMGLKRAHALISKFKSYDKVIKH-LKYSTVSVPPFYEESF 271
DY +PG+G ++A LI +F S +K+++ LK + + P + F
Sbjct: 239 DYNPDGVPGVGPQKALKLIWEFGSLEKLLETVLKGAYFPIDPLEIKKF 286
>gi|409079272|gb|EKM79634.1| hypothetical protein AGABI1DRAFT_114134 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL L+ S + P I+E E G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTGLI-SQLAPAAIREHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLSNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 60 ETTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFERREEAKEEGEEAKETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ ++ V ++ E I++LK + +VAP EA+AQ LA +V A +E
Sbjct: 120 TVEEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM--LLEMCILSGCDYL 228
D D + F I+++ F + + S + N + + G M +++CIL GCDYL
Sbjct: 180 DMDTLTFNAP-ILYRHLTFSEAKKQPISEI--NLEAALKGLEMNMSQFIDLCILLGCDYL 236
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+ + G+G K A LI ++ S K+I HL+
Sbjct: 237 EPIRGVGPKSALKLIREYGSLGKIIAHLR 265
>gi|400598682|gb|EJP66391.1| DNA-repair protein rad2 [Beauveria bassiana ARSEF 2860]
Length = 394
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 13/267 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKQLFQIIKE-EAPDAIKEGEIKNHFGRKVAIDASMSIYSFLIAVRSDGQQLMNDTGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + RK+ +E E
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQ-RKQTAQEGLEEAKETG 118
Query: 112 SSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
++ E F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +E
Sbjct: 119 TAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAKAGKVYAAASE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F S I+ + F + + + +K L ++ +++CIL GCDYL
Sbjct: 179 DMDTLCFD-SPILLRHLTFSEQRKEPIQEIHLDKVLEGLNMKRKQFVDLCILLGCDYLDP 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK 257
+P +G A LI + S +KV++ ++
Sbjct: 238 IPKVGPTTALKLIREHGSLEKVVEAME 264
>gi|432328461|ref|YP_007246605.1| flap structure-specific endonuclease [Aciduliprofundum sp.
MAR08-339]
gi|432135170|gb|AGB04439.1| flap structure-specific endonuclease [Aciduliprofundum sp.
MAR08-339]
Length = 339
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 17/252 (6%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I +K+L+G +A+D Y+ L++ LS R+ G P + H+ ++R
Sbjct: 14 ISLKDLKGRVIAIDAYNSLYQ-FLSIIRQ-PDGTPLRDSRGRVTSHLSGLLYRTANYMAE 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG +K+ +R R L E G+ + Q+A ++ +
Sbjct: 72 GIKPVYVFDGRPPELKMRTIQERMHVRTRALEEWEEALERGDLEEARTRAQQASFLTRDM 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E ++L V ++ AP E +AQ F+A A ++D D + FG R++ M
Sbjct: 132 VDEAKKLLDHMGVPWVQAPSEGEAQAAFMAQRGDAYASASQDFDSLLFGTPRLVRNMAIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ VE + ML N+ L T++ L+++ IL G D+ + G+G K A
Sbjct: 192 GKRKLPRKRVYVEVKPEMLVLNETLKNLEITREQLVDIGILVGTDFNPGIKGIGPKTALK 251
Query: 242 LISKFKSYDKVI 253
LI KF S ++V+
Sbjct: 252 LIKKFGSLERVM 263
>gi|341583087|ref|YP_004763579.1| flap endonuclease-1 [Thermococcus sp. 4557]
gi|340810745|gb|AEK73902.1| flap endonuclease-1 [Thermococcus sp. 4557]
Length = 341
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 149/321 (46%), Gaps = 27/321 (8%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHR-VNLLRH 68
I ++ L G VA+D ++ +++ LS R+ +G TS H+ +R +NL+
Sbjct: 14 IELENLYGRKVAIDAFNAIYQ-FLSTIRQRDGTPLMDSRGRITS-HLSGLFYRNINLM-E 70
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
G+KP +FDG K ++ KR +R+E + E GN + ++ +A ++
Sbjct: 71 AGIKPAYVFDGKPPEFKKKEIEKRREAREEAKEKWYEALERGNLEEAKKYAMRATRVNEG 130
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+ ++ ++L+ + I AP E +AQ ++A K+V A ++D D + FG R++ +
Sbjct: 131 LINDAKRLLELMGIPVIQAPSEGEAQAAYMAARKKVYASASQDYDSLLFGAPRLVRNVTI 190
Query: 189 FGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA 239
G+ VE + ++ + L G ++ L+EM IL G DY + G+G K+A
Sbjct: 191 TGRRKLPGKNVYVEVRPELIVLEEVLKELGIDREKLIEMAILVGTDYNPGGIKGIGPKKA 250
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC--- 296
++ + K D + K+ K S V + E V + +P E I+ C
Sbjct: 251 LTIVKRTK--DPLKKYNKDSEVDLYAIKEFFLNPPVTDEYELKWREPDEEGILKFLCDEH 308
Query: 297 --ISDNIGNDLDFLAKGIAIG 315
+ + N L+ L K + G
Sbjct: 309 DFSEERVKNGLERLKKAVKAG 329
>gi|395330939|gb|EJF63321.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 429
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 79 TTSHLMGFFYRTIRMVENGIKPAYVFDGKPPELKSGVLSKRFEKREEAKEDGEEAKETGT 138
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++L + ++VAP EA+AQ LA +V A +ED
Sbjct: 139 AEDVDRFSRRTVKVTREHNEECRKLLTLMGIPFVVAPSEAEAQCAELARGGKVYAAGSED 198
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG I+ + F + + S + K L E+CIL GCDYL+ +
Sbjct: 199 MDTLTFGAP-ILLRHLTFSEARKTPISEISLEKALEGLEMDMSQFTELCILLGCDYLEPI 257
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A L+ + + KV+ HL+
Sbjct: 258 KGVGPKGALKLLREHGTLGKVVAHLR 283
>gi|145592541|ref|YP_001154543.1| flap endonuclease-1 [Pyrobaculum arsenaticum DSM 13514]
gi|166973704|sp|A4WNC4.1|FEN_PYRAR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|145284309|gb|ABP51891.1| flap endonuclease 1 [Pyrobaculum arsenaticum DSM 13514]
Length = 346
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 24/272 (8%)
Query: 1 MGIQGLLPLL-KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------T 52
MG+ L L+ K + ++ L G CVA+D Y+ L++ S + G P
Sbjct: 1 MGVTELGKLIGKEARREVKLEALAGRCVALDAYNALYQFLASIRQ--PDGTPLMDRAGRI 58
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECESE 109
+ HI +R L G+KP+ +FDG K+ + +R ++++ E L RAI+ E
Sbjct: 59 TSHISGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKAKEKATEELVRAIK---E 115
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G ++ ++A+ ++ + + ++L V ++ AP E +AQ ++A AV +
Sbjct: 116 GRRDEVAKYAKRAIFLTNEMVEDAKKLLTYMGVPWVQAPSEGEAQAAYMARRGHCWAVGS 175
Query: 170 EDSDLIPFGCSRIIFKM-----DKFG-QGVEFQCSMLQKNKDL-SFGGFTKQMLLEMCIL 222
+D D + FG R++ + K G + VE +++ + L S +++ L+++ IL
Sbjct: 176 QDYDSLLFGSPRLVRNLATSPKRKVGDEVVELSPEIIELDAVLKSLRLRSREQLIDLAIL 235
Query: 223 SGCDY-LQSLPGMGLKRAHALISKFKSYDKVI 253
G DY +PG+G +RA LI +F S +K++
Sbjct: 236 LGTDYNPDGVPGIGPQRALKLIWEFGSLEKLL 267
>gi|317376191|sp|B9EMY6.1|FEN1_SALSA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|221220444|gb|ACM08883.1| Flap endonuclease 1-B [Salmo salar]
gi|221221934|gb|ACM09628.1| Flap endonuclease 1-B [Salmo salar]
Length = 380
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 137/302 (45%), Gaps = 17/302 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE + G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-QAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNENGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V YI AP EA+A L + +V A TED
Sbjct: 120 QENIDKFSKRLVKVTQQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + Q + L T + +++CIL GCDY ++
Sbjct: 180 MDGLTFG-TGVLLRHLTASEAKKLPIQEFQFTRLLQDINLTHEQFIDLCILLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEESFGKAVLTFQHQRVYDPKTE 289
G+G KRA LI + S +++++++ S P Y+E+ G F V D T
Sbjct: 239 KGIGPKRAIDLIRQHGSIEEILENIDSSKHPAPEDWLYKEARG----LFLQPDVVDCSTV 294
Query: 290 DI 291
D+
Sbjct: 295 DL 296
>gi|729476|sp|P39749.1|FEN1_MOUSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|499649|gb|AAC37664.1| endonuclease-1 [Mus musculus]
Length = 378
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGI GL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIHGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNE--E 57
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
G TS M + G+KP+ +FDG +K + KR+ R E + + +
Sbjct: 58 GETTSL---MGMFYRTIRMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 114
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L + Y+ AP EA+A LA + +V A
Sbjct: 115 AGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAA 174
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 175 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 233
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L S VP + +A F V DP++
Sbjct: 234 ESIRGIGAKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHK--EAQQLFLEPEVVDPES 291
Query: 289 EDI 291
++
Sbjct: 292 VEL 294
>gi|310800740|gb|EFQ35633.1| XPG domain-containing protein [Glomerella graminicola M1.001]
Length = 394
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE + G VA+D YS+L + +
Sbjct: 1 MGIKHLFQIIKE-EAPDAIKEGDIKAHFGRKVAIDASMSIYSFLIAVRSEGQQLTNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATVGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ + ++LK + YIVAP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNADCQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L+ G ++ ++ CIL GCDYL +
Sbjct: 180 MDTLTFDTP-ILLRHLTFSEARKEPIQEVHIDKVLAGLGMERKQFVDFCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + +++ K
Sbjct: 239 PKIGPSTALKLIREHGDLETLVEAFK 264
>gi|311247497|ref|XP_003122676.1| PREDICTED: flap endonuclease 1-like isoform 2 [Sus scrofa]
Length = 393
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 14 MGIQGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 72
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 73 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 129
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L V Y+ AP EA+A L + +V A
Sbjct: 130 AGAGEEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAA 189
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 190 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 248
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP+
Sbjct: 249 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPEA 306
Query: 289 EDI 291
++
Sbjct: 307 VEL 309
>gi|311247499|ref|XP_003122675.1| PREDICTED: flap endonuclease 1-like isoform 1 [Sus scrofa]
Length = 380
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQA 116
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
G +F ++ V ++ E +L V Y+ AP EA+A L + +V A
Sbjct: 117 AGAGEEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
TED D + FG S ++ + + + ++ L G ++ +++CIL G DY
Sbjct: 177 TEDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYC 235
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+S+ G+G KRA LI K KS +++++ L + VP + +A F V DP+
Sbjct: 236 ESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAQQLFLEPEVLDPEA 293
Query: 289 EDI 291
++
Sbjct: 294 VEL 296
>gi|350631707|gb|EHA20078.1| hypothetical protein ASPNIDRAFT_48158 [Aspergillus niger ATCC 1015]
Length = 359
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 24 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFARKSEATEAHEEAKETGT 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 84 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + N+ L G ++ +++CIL GCDYL+ +
Sbjct: 144 MDTLCFETP-ILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV++ ++
Sbjct: 203 PKVGPNTALKLIRDHGSLEKVLEFME 228
>gi|317374918|sp|C1BM18.1|FEN1_OSMMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|225708450|gb|ACO10071.1| Flap endonuclease 1-B [Osmerus mordax]
Length = 380
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 25/308 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE E G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-QAPGAIKEQEMKNFFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLENGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V Y+ AP EA+A L + +V A TED
Sbjct: 120 QENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + ++ L G + + +++CIL GCDY ++
Sbjct: 180 MDGLTFG-TGVLLRHLTASEAKKLPIQEFHFSRILQDIGLSHEQFIDLCILLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEESFGKAVLTFQHQRVYDPKTE 289
G+G KRA LI + S ++++ ++ S VP Y+E+ G + T
Sbjct: 239 KGIGPKRAMDLIRQHGSIEEILDNIDLSKHPVPEDWLYKEARGLFL------------TP 286
Query: 290 DIVHLSCI 297
D+V SC+
Sbjct: 287 DVVDCSCL 294
>gi|390332710|ref|XP_001197560.2| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like
[Strongylocentrotus purpuratus]
Length = 384
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP +FDG MK + KR R E + + +G+
Sbjct: 60 TTSHLMGIFYRTIRMIEHGLKPCYVFDGKPPEMKSGELTKRKEMRAEAEKELEKAKEQGD 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E +LK V Y+ AP EA+AQ L ++ V TED
Sbjct: 120 QENMNKFEKRLVKVTKQHNEECQHLLKLMGVPYVKAPGEAEAQCCELVKKGKLYGVGTED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG ++ + + + + L G +Q +++CIL GCDY ++
Sbjct: 180 MDALTFG-GNVLLRHLTVSEARKMPIQEFNYQRVLEGLGLNRQQFIDLCILMGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
G+G+KRA L+ S + +++ + + P
Sbjct: 239 KGIGMKRAFELMKTHGSIETILEKIDQNKYPPP 271
>gi|426196176|gb|EKV46105.1| hypothetical protein AGABI2DRAFT_193982 [Agaricus bisporus var.
bisporus H97]
Length = 429
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL L+ S P I+E E G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTGLI-SQHAPAAIREHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLSNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 60 ETTSHLMGFFYRTIRIVENGIKPAYVFDGKPPDLKKGVLSKRFERREEAKEEGEEAKETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ ++ V ++ E I++LK + +VAP EA+AQ LA +V A +E
Sbjct: 120 TVEEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM--LLEMCILSGCDYL 228
D D + F I+++ F + + S + N +++ G M +++CIL GCDYL
Sbjct: 180 DMDTLTFNAP-ILYRHLTFSEAKKQPISEI--NLEVALKGLEMNMSQFIDLCILLGCDYL 236
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+ + G+G K A LI ++ S K+I HL+
Sbjct: 237 EPIRGVGPKSALKLIREYGSLGKIIAHLR 265
>gi|393232393|gb|EJD39975.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 400
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL L++ + IK L G VA+D +++ ++ + + L
Sbjct: 1 MGIKGLTQLVREHAPNAFKEHEIKTLFGRKVAIDASMSIYQFLIAVRQNDGQLLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 61 TTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKSGVLSKRFERREEAKEEGEEAKEVGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++L+ + ++AP EA+AQ LA +V A +ED
Sbjct: 121 AEDVERFTRRTVKVTREHNEECRRLLRLMGIPVVIAPSEAEAQCAELARGGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG I+++ F + + S + K L T +E+C+L GCDYL+ +
Sbjct: 181 MDTLTFGAP-ILYRHLTFSEAKKQPISEIDLQKALDGLNMTMDQFIELCLLLGCDYLEPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A + + S DK++ HL+
Sbjct: 240 KGVGPKSALKYMREMGSLDKIVDHLR 265
>gi|402080846|gb|EJT75991.1| DNA-repair protein rad2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 394
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 20/282 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELC--KG 49
MGI+ L ++K P +K E G VA+D YS+L A+ + E+ +
Sbjct: 1 MGIKQLFSIIKE-NAPDAVKSGEIKNHFGRKVAIDASMSIYSFLI--AVRSNGEVLTNED 57
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + +R + ++E L E
Sbjct: 58 GQTTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYQRKQEALEGLEEARET 117
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + +F ++ V ++ E ++LK + YIVAP EA+AQ LA + +V A +
Sbjct: 118 GTAEEVEKFSRRTVHVTREHNEECRRLLKLMGIPYIVAPTEAEAQCAALARAGKVFAAAS 177
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + F S ++ + F + + + +K L ++ +++CIL GCDYL
Sbjct: 178 EDMDTLCFD-SPVLLRHLTFSEQRKEPILEIHVDKVLEGLNMERKQFVDLCILLGCDYLD 236
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKH-----LKYSTVSVPPF 266
+P +G A LI + S + +++ LKY+ PF
Sbjct: 237 PIPKVGPTTALKLIREHGSLETIVEKMKKGDLKYTVPDDWPF 278
>gi|443894995|dbj|GAC72341.1| hypothetical protein PANT_7d00055 [Pseudozyma antarctica T-34]
Length = 373
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 18/284 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI+GL L+ S P I+E+E G VA+D L++ ++ + + +
Sbjct: 1 MGIKGLTALI-SDEAPGAIREMEIKTYFGRKVAIDASMSLYQFLIAVRQNDGQQLMTESG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + YG+KP+ +FDG +K E KR R+E + E +
Sbjct: 60 ETTSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLKKRFGRREEAREQEEEQKDVA 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ + ++ V + E+ Q+LK + ++AP EA+AQ LA + +V A +E
Sbjct: 120 DVEKMDQLARRQVRPTRQHNEEVRQLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG + I+ K + + + K L +++CIL GCDYL
Sbjct: 180 DMDTLTFG-TPILLKHLTASEQKKLPVHQVDLPKALEGLQMDMPQFIDLCILLGCDYLDP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK---YSTVSVP---PFYE 268
+ G+G K A LI + KS + V++HLK +V +P PF E
Sbjct: 239 IKGIGPKTALKLIREHKSLENVVEHLKEEAKKSVQIPEHWPFQE 282
>gi|345569735|gb|EGX52564.1| hypothetical protein AOL_s00007g552 [Arthrobotrys oligospora ATCC
24927]
Length = 390
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGKPPTLKSGELAKRTARKFEAQEAHEEAKEVGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V + E ++LK + Y+ AP EA+AQ LA S +V A +ED
Sbjct: 120 AEEIEKFSRRTVRATREHNEECKRLLKLMGIPYLDAPCEAEAQCAILAKSGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F + I+ + F + + + ++ ++ T++ +++CIL GCDY ++
Sbjct: 180 MDTLCFE-TPILLRHLTFSEQRKQPIQEIHLDRVMAGLDMTREQFIDLCILLGCDYCDTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
P +G A LI ++KS + VI++L VP ++
Sbjct: 239 PKVGPTTALKLIRQYKSIEGVIENLDKDKYKVPDYF 274
>gi|116203453|ref|XP_001227537.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175738|gb|EAQ83206.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 378
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 43 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEANEGLEEAKETGT 102
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 103 AEDVEKFSRRTVRVTREHNEECQRLLKLMGIPYILAPTEAEAQCAVLARAGKVYAAASED 162
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + K L ++ +++CIL GCDYL +
Sbjct: 163 MDTLCFNTP-ILLRHLTFSEQRKEPIQEIHVEKVLEGLNMERKQFVDLCILLGCDYLDPI 221
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ +K
Sbjct: 222 PKVGPSTALKLIREHGSLEKVVEFMK 247
>gi|346322835|gb|EGX92433.1| DNA-repair protein rad2 [Cordyceps militaris CM01]
Length = 394
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 13/267 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGL- 50
MGI+ L ++K P IKE E G VA+D YS+L S ++L
Sbjct: 1 MGIKQLFSIIKE-EAPEAIKEGEIKQHFGRKVAIDASMSIYSFLI-AVRSDGQQLTNDTG 58
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP+ +FDG +K + KR + ++ L E + G
Sbjct: 59 ETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQTALEGLEEAKETG 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ +F ++ V ++ E ++L + +IVAP EA+AQ LA + +V A +E
Sbjct: 119 TAEDVEKFSRRTVRVTREHNAECQRLLALMGIPFIVAPTEAEAQCAVLAKAGKVFAAASE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F S I+ + F + + + +K L ++ +++CIL GCDYL
Sbjct: 179 DMDTLCFD-SPILLRHLTFSEQRKEPIQEIHLDKVLEGLNMERKQFVDLCILLGCDYLDP 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK 257
+P +G A LI ++ + +KV++ ++
Sbjct: 238 IPKVGPTTALKLIREYGTLEKVVEAMQ 264
>gi|345005776|ref|YP_004808629.1| Flap structure-specific endonuclease [halophilic archaeon DL31]
gi|344321402|gb|AEN06256.1| Flap structure-specific endonuclease [halophilic archaeon DL31]
Length = 326
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 11/229 (4%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HYG 70
I EL G VAVD ++WL++ + + + T+ D + + +++
Sbjct: 15 IPFSELSGSVVAVDAHNWLYRYLTTTVKFTADSVYTTSDGDEVANLLGVVQGLPKFFEAD 74
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+ P+L+FDGG+ +K ++ +R RK+ R E E G+S + + ++ +I
Sbjct: 75 MTPVLVFDGGVTDLKSDEVERRREQRKKAEERKQEAEEAGDSVEAARLEARTQRLTDTIH 134
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+L + +V YI AP E +AQ +A + +V+ +ED D + FG R + ++ G
Sbjct: 135 ETTRGLLDRLDVPYIEAPAEGEAQCAHMAATGEVDYAGSEDYDTMTFGAPRTLRQLTSKG 194
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
+ D+S+ + L+++ +L G D+ + + G G K A
Sbjct: 195 HPELMDLQKTLEKHDISY-----EQLVDVALLMGTDFNEGVTGYGPKTA 238
>gi|407916553|gb|EKG09919.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 392
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + T+ H+ +R + G+KP+
Sbjct: 23 IKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + + E E + G + +F ++ V ++ E
Sbjct: 83 FVFDGAPPKLKSGELAKRFQRKSEAQEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECQ 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK + YI+AP EA+AQ LA + +V A +ED D + F S ++ + F + +
Sbjct: 143 RLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLTFN-SPVLLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ +K L ++ +++CIL GCDYL + G+G A L+ + K+ + V+K
Sbjct: 202 EPIQEIHLDKVLEGLEMEREQFIDLCILLGCDYLDPIKGVGPSTALKLVREHKNLEGVVK 261
Query: 255 HLK-YSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDNIGNDLDFLAK 310
++ S ++P + + A L F +P H C D+D L K
Sbjct: 262 FMQGNSKYTIPEDW--PYQDARLLF-----LEPDVHPADHPECEFKWDAPDVDGLIK 311
>gi|344233741|gb|EGV65611.1| PIN domain-like protein [Candida tenuis ATCC 10573]
Length = 376
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 10/265 (3%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR-- 54
MG++GL L+K + +K L G +A+D L++ ++ + + L +
Sbjct: 1 MGVKGLNALIKDHSPGAIKEFQLKNLFGRKIAIDASMCLYQYLIAVRQGDGQNLTNDKGE 60
Query: 55 ---HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
H+ +R + G+KP+ +FDG +K + KR ++E + + + + EG+
Sbjct: 61 ITSHLSGMFYRTLRMVENGIKPVYVFDGKPPVLKGGELEKRYLRKEEAIKKMEDAKEEGS 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V +S E ++L+ + YI AP EA+AQ LA +V A +ED
Sbjct: 121 AEDILKFEKRMVRVSREHNDEAKKLLELMGIPYINAPCEAEAQCAELARGGKVFAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D I + ++ + F + + + + K+ +++CIL GCDY +++
Sbjct: 181 MDTICYSPPYLLRHL-TFSEARKIPIDQIDCKTAIEGFEMDKKTFIDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL 256
G+G A LI + S D ++K +
Sbjct: 240 KGVGPVTAFKLIKEHGSIDNIVKFI 264
>gi|145245469|ref|XP_001395002.1| DNA repair protein rad2 [Aspergillus niger CBS 513.88]
gi|317374885|sp|A5ABU3.1|FEN1_ASPNC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134079702|emb|CAK97128.1| unnamed protein product [Aspergillus niger]
Length = 395
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFARKSEATEAHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + N+ L G ++ +++CIL GCDYL+ +
Sbjct: 180 MDTLCFETP-ILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV++ ++
Sbjct: 239 PKVGPNTALKLIRDHGSLEKVLEFME 264
>gi|358369087|dbj|GAA85702.1| DNA-repair protein Rad2 [Aspergillus kawachii IFO 4308]
Length = 395
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFARKSEATEAHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + N+ L G ++ +++CIL GCDYL+ +
Sbjct: 180 MDTLCFETP-ILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV++ ++
Sbjct: 239 PKVGPNTALKLIRDHGSLEKVLEFME 264
>gi|452004834|gb|EMD97290.1| hypothetical protein COCHEDRAFT_1220743 [Cochliobolus
heterostrophus C5]
Length = 395
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 6/230 (2%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E A A E + G
Sbjct: 60 TTSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAQAAAEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTKEHNAECQRLLKLMGIPYIIAPTEAEAQCAALAKGGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + +K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLTF-ASPILLRHLTFSEQRKEPILEIHLDKVLEGLAMDQKQFIDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYST---VSVPPFYEESFGKAVLTF 278
G+G A LI + K + V++H+K + +++P + F A L F
Sbjct: 239 KGIGPSTALKLIREHKDLEGVVEHIKSQSSKKLTIPDDW--PFADARLLF 286
>gi|82231650|sp|Q5I4H3.1|FEN1_XIPMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57639537|gb|AAW55636.1| flap endonuclease-1 [Xiphophorus maculatus]
gi|57639539|gb|AAW55637.1| flap endonuclease-1 [Xiphophorus maculatus]
Length = 380
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 13/300 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE + G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-HAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQSEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLENGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAKAQELGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ + ++L V YI AP EA+A L +V A TED
Sbjct: 120 QENIDKFSKRLVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEASCAALVKEGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + N+ L G T + +++CIL GCDY ++
Sbjct: 180 MDGLTFG-TNVLLRHLTASEAKKLPVQEFHFNRILQDIGLTSEQFIDLCILLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA LI + S +++++++ S P + + +A F V D T D+
Sbjct: 239 KGIGPKRAIDLIRQHGSIEEILENIDTSKHPAPEDW--LYKEARNLFLKPEVVDSSTVDL 296
>gi|170291015|ref|YP_001737831.1| flap endonuclease-1 [Candidatus Korarchaeum cryptofilum OPF8]
gi|226700953|sp|B1L6R9.1|FEN_KORCO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|170175095|gb|ACB08148.1| XPG I domain protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 342
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 15 IPIHIKELEGCCVAVDTYSWLHKGALSCSRE-------LCKGLPTSRHIDYCMHRVNLLR 67
+ + + ++ G +A+D ++ +++ L+ R+ KG TS H N L+
Sbjct: 13 VELELSDIAGKKIALDAFNAMYQ-FLAKVRQPDGTPLMTSKGEITSVHSGIFYRTANFLK 71
Query: 68 HYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISP 127
G+ PI +FDG K +R R+R+E + E G+ + ++ Q A++I+
Sbjct: 72 E-GIIPIYVFDGEKPSFKSRAIEERVRAREEAELKWKEALEIGDLEEARKYAQAALNITG 130
Query: 128 SIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMD 187
I + +LK V + AP E +AQ +A+ V A ++D D + FG R+I +
Sbjct: 131 DIVEDCKTILKLMGVPIVQAPSEGEAQAAHMAMKGDVWATASQDYDSLLFGAPRLIRNLT 190
Query: 188 KFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKR 238
G+ V+ +++ L G +++ L+ + IL G DY L + G+G+KR
Sbjct: 191 ITGKRKLPGKEVYVDINPELIELESVLKRNGISREQLIMIGILVGTDYNLGGVKGIGVKR 250
Query: 239 AHALISKFKS----YDKVIKHLKYSTVSVPPFY 267
A L+ K+K + KV +S+ F+
Sbjct: 251 ALELVKKYKRPEDLFSKVPWEFDVDPISIYEFF 283
>gi|67524613|ref|XP_660368.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|74597180|sp|Q5B9L6.1|FEN1_EMENI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40744016|gb|EAA63198.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|259486319|tpe|CBF84062.1| TPA: 5' to 3' exonuclease, 5' flap endonuclease (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 395
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR+ + E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRSARKHEATEAHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + N+ L G + +++CIL GCDYL+ +
Sbjct: 180 MDTLCFEAP-ILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRNQFIDLCILLGCDYLEPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + +KV++ ++
Sbjct: 239 PKVGPNTALKLIRDHGTLEKVVESIE 264
>gi|343427426|emb|CBQ70953.1| probable DNA repair endonuclease rad2 [Sporisorium reilianum SRZ2]
Length = 374
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 18/284 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE-----LCKGL 50
MGI+GL L+ S P IKE+E G VA+D L++ ++ + + +
Sbjct: 1 MGIKGLTALI-SDEAPGAIKEMEIKTYFGRKVAIDASMSLYQFLIAVRQNDGQQLMTESG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + YG+KP+ +FDG +K E KR R+E + E +
Sbjct: 60 ETTSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLQKRFGRREEAREQEEEQKDVA 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ + ++ V + E+ +LK + ++AP EA+AQ LA + +V A +E
Sbjct: 120 DVEKMDQLARRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG + I+ K + + + K L + +++CIL GCDYL
Sbjct: 180 DMDTLTFG-TPILLKHLTASEQKKLPVHQVDLPKALEGLQMSMPQFIDLCILLGCDYLDP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK---YSTVSVP---PFYE 268
+ G+G K A LI + K+ + V++HLK +V +P PF E
Sbjct: 239 IKGIGPKTALKLIREHKTLENVVEHLKEEGKKSVQIPEHWPFQE 282
>gi|440470255|gb|ELQ39332.1| DNA-repair protein rad2 [Magnaporthe oryzae Y34]
gi|440487391|gb|ELQ67182.1| DNA-repair protein rad2 [Magnaporthe oryzae P131]
Length = 416
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 42/304 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELC--KG 49
MGI+ L ++K P IK E G VA+D YS+L A+ + E+ +
Sbjct: 1 MGIKQLFTIIKE-NAPAAIKTGEIKNQFGRKVAIDASMSIYSFLI--AVRSNGEMLTNED 57
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + +R + ++E L E
Sbjct: 58 GQTTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYQRKQEALEGLEEARET 117
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G + +F ++ V ++ E Q+LK + YI+AP EA+AQ LA + +V A +
Sbjct: 118 GTAEDVEKFSRRTVRVTREHNEECRQLLKLMGIPYIIAPTEAEAQCAVLARAGKVFAAAS 177
Query: 170 EDSDLIPFGCSRII---------------FKMDKFGQGVEF-----QCS--MLQKNKDLS 207
ED D + F ++ +DK +G++ +C+ M+ ++
Sbjct: 178 EDMDTLCFDSPILLRHLTFSEARKEPIQEIHVDKVLEGLDMDRKQVRCTSDMVNVYQERP 237
Query: 208 FGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK-----HLKYSTVS 262
F KQ +++CIL GCDYL +P +G A LI + S + +++ LKY+
Sbjct: 238 ADSFNKQ-FVDLCILLGCDYLDPIPKVGPSTALKLIREHGSLETIVEKMKKGELKYTVPE 296
Query: 263 VPPF 266
PF
Sbjct: 297 DWPF 300
>gi|13541391|ref|NP_111079.1| flap endonuclease-1 [Thermoplasma volcanium GSS1]
gi|28380020|sp|Q97B98.1|FEN_THEVO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|14324774|dbj|BAB59701.1| FLAP endonuclease-1 [Thermoplasma volcanium GSS1]
Length = 335
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 122/245 (49%), Gaps = 25/245 (10%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHR-VNLLRHYG 70
+K+ A+DTY+ L++ LS R+ G P + H+ +R VNL+ + G
Sbjct: 16 LKDQANQVFAIDTYNILYQ-LLSNVRQ-YDGTPLMDSSGNVTSHLYGIFYRTVNLVEN-G 72
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+KPI +FDG P+K R ++++ A E S G + ++Y + I+P I
Sbjct: 73 IKPIFVFDGKPSPLKNRTLEIRQLAKEKAKAELEEAISRGEENLK-QYYSRINYITPQIV 131
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
++ ++L + Y+ AP E +AQ +++ K + VI++D D + FG +I+ +G
Sbjct: 132 NDTKELLTYMGIPYVDAPSEGEAQASYMT-RKDADGVISQDYDCLLFGAKKILRNFAIYG 190
Query: 191 Q----------GVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
+ V + ML ++ L G + L+E+ IL G D+ + + G+G K+A
Sbjct: 191 RRKVPRKNVYRTVYPEYVML--DEVLKKNGINQDQLIEIGILVGTDFNEGIKGIGAKKAL 248
Query: 241 ALISK 245
ALI K
Sbjct: 249 ALIKK 253
>gi|71652611|ref|XP_814958.1| flap endonuclease-1 (FEN-1) [Trypanosoma cruzi strain CL Brener]
gi|122023721|sp|Q4DKQ5.1|FEN1_TRYCC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|70879977|gb|EAN93107.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma cruzi]
Length = 393
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 132/287 (45%), Gaps = 21/287 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSC-------SRELCK 48
MGI GL LL P I+E E G +A+D +++ ++ EL
Sbjct: 1 MGILGLSKLLYD-RSPAAIRERELKNYFGRRIAIDASMTIYQFIIAMKGFQDGQGMELTN 59
Query: 49 --GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE- 105
G TS H++ R + G++PI +FDG +K + +R R R E + +
Sbjct: 60 EAGEVTS-HLNGLFARTLRMVDEGLRPIYVFDGKPPTLKASELQER-RQRAEEAQQLFDT 117
Query: 106 CESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE 165
+ EGN + ++ V +S E ++L+ + + AP EA+AQ L K+
Sbjct: 118 AKEEGNDELMEKMSKRTVRVSREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKKKAW 177
Query: 166 AVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGC 225
AV TED D + FG ++ + + + + + ++ L G T +++CIL GC
Sbjct: 178 AVATEDMDALTFGAP-VMLRHLTYSEAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGC 236
Query: 226 DYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEES 270
DY+ +PG+G ++A I K + +++ L SVP YEE+
Sbjct: 237 DYVPKIPGIGPQKAWEGIKKHGDIETLLQSLDAGRHSVPEGFHYEEA 283
>gi|402580560|gb|EJW74510.1| hypothetical protein WUBG_14580, partial [Wuchereria bancrofti]
Length = 266
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 17 IHIKELEGCC---VAVDTYSWLHKGALSC----SRELCKGLPTSRHIDYCMHRVNLLRHY 69
I +KE +G VAVD L++ ++ S+ + T+ H+ +R +
Sbjct: 18 IRLKEFKGYFGRKVAVDASMCLYQFLIAVRQDGSQLQTESGETTSHLLGMFYRTIRMIDN 77
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK + KR R E + + G+ ++ +F ++ V ++
Sbjct: 78 GIKPVYVFDGKPPQMKASELEKRTERRTEAEKQRNDAVELGDEASVNKFERRLVKVTKEQ 137
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E +++ + + AP EA+AQ LA + +V A ++ED D + FG S I+ +
Sbjct: 138 NEEAKRLVTLMGIPILDAPCEAEAQCAALAKAGKVFATVSEDMDALTFG-SPILLRQMIA 196
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSY 249
+ + + N+ L G +++CIL GCDY+ ++ G+G K+A LI K++
Sbjct: 197 SEAKKLPVKEMNLNQVLKDFGMNMGQFVDLCILLGCDYVSTIRGIGPKKAFELIKKYECI 256
Query: 250 DKVIKHL 256
+ V++ +
Sbjct: 257 ENVLEAI 263
>gi|61680058|pdb|1UL1|X Chain X, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680059|pdb|1UL1|Y Chain Y, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680060|pdb|1UL1|Z Chain Z, Crystal Structure Of The Human Fen1-Pcna Complex
Length = 379
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 140/302 (46%), Gaps = 19/302 (6%)
Query: 2 GIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCKG 49
GIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 GIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE- 58
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 59 --TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAA 116
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A T
Sbjct: 117 GAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAAT 176
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG S ++ + + + ++ L G ++ +++CIL G DY +
Sbjct: 177 EDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCE 235
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 SIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHQLFLEPEVLDPESV 293
Query: 290 DI 291
++
Sbjct: 294 EL 295
>gi|396499081|ref|XP_003845386.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
gi|312221967|emb|CBY01907.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
Length = 423
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 51 IKNQFGRKVAIDASMSIYSFLIAVRSGGEQLMNESGETTSHLMGLFYRTLRMVDNGIKPL 110
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + + E A A E + G + +F ++ V ++ E
Sbjct: 111 YVFDGAPPKLKSGELAKRFQRKTEAQAAAEEAKETGTAEDVEKFSRRTVRVTREHNEECR 170
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK + +IVAP EA+AQ LA +V A +ED D + F S I+ + F + +
Sbjct: 171 RLLKLMGIPFIVAPTEAEAQCAVLARGGKVYAAASEDMDTLTFN-SPILLRHLTFSEQRK 229
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ +K L + +++CIL GCDYL + G+G A LI + K + V+K
Sbjct: 230 EPILEIHLDKVLEGLAMDRTQFIDLCILLGCDYLDPIKGIGPSTALKLIREHKDLEGVVK 289
Query: 255 HLK 257
H++
Sbjct: 290 HIQ 292
>gi|288559640|ref|YP_003423126.1| flap endonuclease Fen [Methanobrevibacter ruminantium M1]
gi|288542350|gb|ADC46234.1| flap endonuclease Fen [Methanobrevibacter ruminantium M1]
Length = 328
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 128/256 (50%), Gaps = 12/256 (4%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I++K+LEG VA+D Y+ L++ LS R+ G P + H+ ++R +
Sbjct: 14 INLKDLEGRTVAIDAYNTLYQ-FLSGIRQ-RDGSPLMDANGNVTSHLSGILYRTASIVDK 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG + K + KR R+E + E ++ GN + ++ ++ +SP I
Sbjct: 72 GIKPVYVFDGDVSEYKTKTVEKRRALREEANQKYEEAKAAGNIEEARKYAIRSSRLSPYI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++L+ + Y+ A E +AQ ++ + AV ++D D + FG RII +
Sbjct: 132 IESSKKLLEYMGIPYVQAKGEGEAQGAYMVKNGDAWAVASQDYDCLLFGAPRIIRNLTLS 191
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSY 249
G G+ L+ +K L+ +++ L+++ ++ G D+ + + G+G K LI + S
Sbjct: 192 G-GLS-NLEYLELDKVLTEIDLSREQLVDVALMVGTDFNEGIYGIGAKTGLKLIRQ-NSL 248
Query: 250 DKVIKHLKYSTVSVPP 265
+ ++ + V V P
Sbjct: 249 EDILVQKGITDVEVEP 264
>gi|147920854|ref|YP_685339.1| flap endonuclease-1 [Methanocella arvoryzae MRE50]
gi|121690538|sp|Q0W6I0.1|FEN_UNCMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|110620735|emb|CAJ36013.1| flap structure-specific endonuclease [Methanocella arvoryzae MRE50]
Length = 340
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 20/245 (8%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I +KEL VAVD Y+ L++ LS R+ G P + H+ ++RV L
Sbjct: 14 IELKELNNRTVAVDAYNTLYQ-FLSIIRQ-QDGAPLADDRGNVTSHLSGIIYRVTNLVEE 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAI-ECESEGNSSASYEFYQKAVDISPS 128
G+KP+ +FDG P + E +AR+ AR + E S+ +Y++ Q + I+
Sbjct: 72 GMKPVFVFDGK--PPSFKAETIKARAEVREAARQMYEAAKAAGSAEAYKYAQASTSINRQ 129
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
I + +L + +IVAP E +AQ ++ + V ++D D + FG R++ +
Sbjct: 130 IVDDAKVLLGYMGIPFIVAPSEGEAQAAYMVSRGAADYVGSQDYDSLLFGAPRVVRNIAI 189
Query: 189 FGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH 240
G+ ++ + +++ + L+ G T++ L++M IL G DY + +G K A
Sbjct: 190 TGKRKVPRKNIYMDVKPEVIELQEVLATLGLTREELIDMAILVGTDYNPGIFKVGPKTAL 249
Query: 241 ALISK 245
L+ K
Sbjct: 250 KLVKK 254
>gi|317376168|sp|B1H158.1|FEN1_XENTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|169642201|gb|AAI60482.1| flap structure specific endonuclease 1 [Xenopus (Silurana)
tropicalis]
Length = 382
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 152/350 (43%), Gaps = 31/350 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ + P IKE + G VAVD +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIADVA-PAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDGNMLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG MK + KR+ R E E G
Sbjct: 60 TTSHLMGMFYRTIRMIEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V Y+ AP EA+A L + +V A TED
Sbjct: 120 VENIEKFNKRLVKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGKVYAAATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + N+ + G + + +++CIL G DY +++
Sbjct: 180 MDALTFG-TPVLLRHLTASEAKKLPIQEFHLNRVMQDMGVSHEQFVDLCILLGSDYCETI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD------ 285
G+G KRA LI + KS ++++ ++ +P + + + F V D
Sbjct: 239 RGIGPKRAIDLIRQHKSIEEIVDNIDLKKYPIPENWLHKEARQL--FLEPEVVDTESTEL 296
Query: 286 ----PKTEDIVHLSCI-----SDNIGNDLDFLAK---GIAIGDLDPFTQL 323
P E +V C D I N LAK G G LD F ++
Sbjct: 297 KWIEPDEEGLVAFMCAEKQFSEDRIRNGAKKLAKNRQGSTQGRLDDFFKV 346
>gi|348500556|ref|XP_003437839.1| PREDICTED: probable flap endonuclease 1 homolog [Oreochromis
niloticus]
Length = 348
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 26/202 (12%)
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
+G+KP+ +FDG K KRA++ N Y + S
Sbjct: 65 HGIKPVFVFDGKPPGEKKAVLEKRAQTAGRN-------------------YSNWTGTASS 105
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMD- 187
E +Q+LK V I AP +A+A L V AV +ED D +PFG + +I +++
Sbjct: 106 QTKECLQLLKCLGVPVIQAPGDAEALCAQLVREGTVHAVASEDMDTLPFGANILIRQLNA 165
Query: 188 -KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKF 246
K + +E+ L + + F +++CIL GCDY + +PG+G KRA LI K
Sbjct: 166 KKDSEVIEYSLPKLLEKLQIGHKEF-----VDLCILLGCDYCEKIPGLGPKRALTLIQKH 220
Query: 247 KSYDKVIKHLKYSTVSVPPFYE 268
++ + V+ H+ T VP ++
Sbjct: 221 RTIEDVVLHINRKTHPVPNIWK 242
>gi|91773853|ref|YP_566545.1| flap endonuclease-1 [Methanococcoides burtonii DSM 6242]
gi|121684238|sp|Q12UT1.1|FEN_METBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|91712868|gb|ABE52795.1| FEN1 flap endonuclease with 5'-3' exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 338
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 17/255 (6%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I I L VA+D Y+ L++ LS R+ +G TS H+ ++R+ L
Sbjct: 14 IEIAGLSNKVVAIDAYNTLYQ-FLSIIRQRDGTPLKDSRGQITS-HLSGILYRLTSLIEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
GVKPI +FDG K + KR R+ A+ + +++G +Y++ Q + ++ +
Sbjct: 72 GVKPIFVFDGKPPDFKSDTLAKRHEVRESATAKWEDAKAQGLEEEAYKYAQASSKVTREM 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ +++L+ + Y+ AP E +AQ +++ + + ++D D FG +++ +
Sbjct: 132 IDDSVRLLELMGIPYVKAPSEGEAQASYMVQKGDADYIGSQDYDSFLFGAPQVVRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + +L L G T+Q L+++ + G DY L +G KRA
Sbjct: 192 GKRKLPKKNIYVDVKPEVLSLVDSLGELGITRQQLIDIAMCVGTDYNTGLENIGPKRALK 251
Query: 242 LISKFKSYDKVIKHL 256
L+ + V+K L
Sbjct: 252 LVKEHGDIKVVLKEL 266
>gi|149239008|ref|XP_001525380.1| structure-specific endonuclease RAD27 [Lodderomyces elongisporus
NRRL YB-4239]
gi|317374907|sp|A5E121.1|FEN1_LODEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146450873|gb|EDK45129.1| structure-specific endonuclease RAD27 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 384
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 128/266 (48%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPHAYKEFELKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNDEGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + + + +
Sbjct: 61 TTSHLSGIFYRTIRMVENNIKPVYVFDGKPPVLKGGELEKRLLKREEAQKQIDNLKDDAS 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
S ++ ++ V +S E ++L+ + Y+ AP EA+AQ LA +V A +ED
Sbjct: 121 VSDMTKYQKRLVRVSRDQNDEAKKLLELMGIPYVNAPCEAEAQCAELARGGKVFAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + +++ + F + + + + + TK+ +++CIL GCDY +++
Sbjct: 181 MDTLCYEPPQLLRHL-TFAEARKMPIDQITYKEAIQGLDMTKEQFIDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A+ LI + S D ++K+L+
Sbjct: 240 KGVGPVTAYKLIKEHGSLDNIVKYLQ 265
>gi|67610024|ref|XP_667077.1| flap endonuclease 1 [Cryptosporidium hominis TU502]
gi|54658174|gb|EAL36849.1| flap endonuclease 1 [Cryptosporidium hominis]
Length = 454
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 126/260 (48%), Gaps = 23/260 (8%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
++ HI+ + R L G+KP+ +FDG MK ++ KR R++ LA + + G+
Sbjct: 26 STSHINGMLSRTTRLLEAGIKPVFVFDGAPPEMKKDELTKRDERREKALAELEKAQEVGD 85
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + + ++ ++ ++L + I AP EA+AQ L V V+TED
Sbjct: 86 EELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCIDAPSEAEAQCAELCKDGLVYGVVTED 145
Query: 172 SDLIPFGCSRIIFKMD--------------KFGQGVE-FQCSMLQKNKDLSFGGFTKQML 216
+D + FG I +++ K G++ + S++ D++ F
Sbjct: 146 ADSLTFGTPIQIKQLNFSESSNKISDKSPSKQKNGMQIIKLSLILSELDINMDQF----- 200
Query: 217 LEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVL 276
+++CILSGCDY ++ G+G A+ L+ K+ + + ++K++ + VP ++ F K
Sbjct: 201 IDLCILSGCDYCGTIRGIGTSTAYKLLKKYHNIESILKNIDQTKNPVPGNFD--FSKVRE 258
Query: 277 TFQHQRV-YDPKTEDIVHLS 295
F++ V + + +D++ S
Sbjct: 259 LFKNPLVSKNNQIKDLIKWS 278
>gi|318055766|ref|NP_001187811.1| flap endonuclease 1-b [Ictalurus punctatus]
gi|308324033|gb|ADO29152.1| flap endonuclease 1-b [Ictalurus punctatus]
Length = 380
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 19/321 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P I+E + G +A+D +++ ++ R+
Sbjct: 1 MGIHGLAKLIAD-QAPTAIREQDIKNYFGRKIAIDASMCIYQFLIAVRRDGNVLQNDDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLDSGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEMGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V YI AP EA+A L + + A TED
Sbjct: 120 QENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKAYATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S ++ + + + ++ L + Q +++CIL GCDY ++
Sbjct: 180 MDGLTFGTS-VLLRHLTASEAKKLSIQEFHFSRVLQEMSLSHQQFIDLCILLGCDYCGTI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVL--------TFQHQRV 283
G+G KRA LI ++ S ++++ ++ S P + +A+ T +
Sbjct: 239 KGIGPKRAIDLIKQYGSIEEILDNIDQSKHPAPEDWLYKEARALFLEPEVVDCTAMELKW 298
Query: 284 YDPKTEDIVHLSCISDNIGND 304
+P + +V C D
Sbjct: 299 NEPDEDGLVQFMCSEKQFSED 319
>gi|308806964|ref|XP_003080793.1| FEN-1 (ISS) [Ostreococcus tauri]
gi|116059254|emb|CAL54961.1| FEN-1 (ISS) [Ostreococcus tauri]
Length = 428
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 17/320 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCC-----VAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL S P ++E + VA+D +++ ++ R + L
Sbjct: 40 MGIKGLTALL-SENAPGAMREQKFTSYLDRRVAIDASMHIYQFMIAVGRTGEQTLTNEAG 98
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ + R + + G+KP+ +FDG MK + KR R+E A G
Sbjct: 99 EVTSHLQGMLMRTSRMLEAGIKPVYVFDGKPPTMKGGELAKRKDKREEAEAALKAAREAG 158
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + ++ V +S + E++++ + + AP EA+A + + V AV TE
Sbjct: 159 NQEEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAGLVWAVGTE 218
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F R+ + + E K ++ G T +++CIL GCDY +
Sbjct: 219 DMDTLTFAAPRVARNL-MAPKSAEKPVLEFDYEKTIAGLGLTADQFIDLCILCGCDYTDT 277
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
+ G+G K A LI + S +K+++ + T PP + F A F++ V D
Sbjct: 278 IRGVGPKTALKLIKEHGSIEKILEAI--DTEKYPPPKDWEFAGARELFKNPEVMDVSG-- 333
Query: 291 IVHLSCISDNIGNDLDFLAK 310
++LS + + ++FL K
Sbjct: 334 -INLSWKAPDEEGLVEFLVK 352
>gi|380479712|emb|CCF42855.1| XPG domain-containing protein [Colletotrichum higginsianum]
Length = 394
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 11/266 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKHLFQIIKE-EAPDAIKEGEIKAHFGRKVAIDASMSIYSFLIAVRSDGQQLTNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ + ++LK + +IVAP EA+AQ LA + +V A +ED
Sbjct: 120 AEEVEKFSRRTVRVTREHNADCQKLLKLMGIPFIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L G ++ ++ CIL GCDYL +
Sbjct: 180 MDTLTFDTP-ILLRHLTFSEQRKEPIQEVHIDKVLEGLGMERKQFVDFCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + +++ K
Sbjct: 239 PKVGPSTALKLIREHGDLETLVEAFK 264
>gi|356575281|ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
Length = 382
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +A+D +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ R L G+KP+ +FDG +K ++ KR R E E
Sbjct: 60 EVTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETA 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N +F ++ V ++ + ++L+ V + AP EA+AQ L + +V AV +E
Sbjct: 120 NKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG + + MD + + EF+ + + + +++ F +++CILSGCD
Sbjct: 180 DMDSLTFGSPKFLRHLMDPSSKKIPVMEFEVAKILEELNMTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
Y S+ G+G A LI + S + ++++L +P P+ E
Sbjct: 235 YCDSIRGIGGLTALKLIRQHGSIENILENLNKERYQIPDNWPYQE 279
>gi|82187497|sp|Q6TNU4.1|FEN1A_DANRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|37362214|gb|AAQ91235.1| flap structure-specific endonuclease 1 [Danio rerio]
gi|47940409|gb|AAH71488.1| Fen1 protein [Danio rerio]
Length = 380
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 21/287 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE E G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-HAPSAIKEHEIKSYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLLAQAQEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V YI AP EA+A L + +V A TED
Sbjct: 120 QENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATED 179
Query: 172 SDLIPFGCSRIIFKMD----KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + FG + ++ + K EF S + ++ +L T Q +++CIL GCDY
Sbjct: 180 MDGLTFGTTVLLRHLTASEAKKLPIQEFHFSRILQDMEL-----THQQFIDLCILLGCDY 234
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEESFG 272
++ G+G KRA LI + S +++++++ + P Y+E+ G
Sbjct: 235 CGTIKGIGPKRAIDLIKQHGSIEEILENIDPNKHPAPEDWLYKEARG 281
>gi|330914981|ref|XP_003296859.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
gi|311330789|gb|EFQ95031.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E A A E + G
Sbjct: 7 TTSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAHAAAEEAKETGT 66
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YIVAP EA+AQ LA +V A +ED
Sbjct: 67 AEDVEKFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASED 126
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L ++ +++CIL GCDYL +
Sbjct: 127 MDTLTFDTP-ILLRHLTFSEQRKEPILEIHLDKVLEGLQMERKQFIDLCILLGCDYLDPI 185
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYST---VSVPPFYEESFGKAVLTF 278
G+G A LI + + +++H+K T +++P + F A L F
Sbjct: 186 KGIGPSTALKLIREHNDLEGIVEHIKSQTSKKLTIPDDW--PFADARLLF 233
>gi|386001444|ref|YP_005919743.1| FLAP endonuclease [Methanosaeta harundinacea 6Ac]
gi|357209500|gb|AET64120.1| FLAP endonuclease [Methanosaeta harundinacea 6Ac]
Length = 336
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 25/256 (9%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I ++EL G +AVD ++ L++ LS R+ G P T+ H+ ++R+ L
Sbjct: 14 IELEELAGKLIAVDAFNTLYQ-FLSIIRQ-QDGTPLRDGSGRTTSHLSGILYRMTNLLEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRA--RSRKENL-ARAIECESEGNSSASYEFYQKAVDIS 126
G K + +FDG K E ++RA RSR E + RA E +G +++ Q A +
Sbjct: 72 GAKVVFVFDGEPPRFKRETLDQRAETRSRAEEMWQRAKEEGLDG-----FKYAQAASRLE 126
Query: 127 PSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM 186
+ + +++L+ + + AP E +AQ F+A+ V+ V ++D D + FG R++ M
Sbjct: 127 DEMIADAMRLLEAMGIPAVQAPSEGEAQAAFMAIKGDVDLVGSQDYDALLFGAPRVVRNM 186
Query: 187 DKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKR 238
G+ VE ++ +++L G ++ L+E+ I+ G DY + L +G K
Sbjct: 187 AITGKRKLPGKNVYVEVMPEVISLDEELLRLGIARRQLVEIGIMCGTDYNEGLKRVGPKT 246
Query: 239 AHALISKFKSYDKVIK 254
A LI + + + V++
Sbjct: 247 ALKLIKEHGNLEGVLE 262
>gi|68074223|ref|XP_679026.1| flap exonuclease [Plasmodium berghei strain ANKA]
gi|74991237|sp|Q4Z015.1|FEN1_PLABA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56499663|emb|CAH96377.1| flap exonuclease, putative [Plasmodium berghei]
Length = 478
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 31/293 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSC------SRELCKGL 50
MGI+GL + + + I I+ L G VA+D L++ ++ + +
Sbjct: 1 MGIKGLTKFIADTAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDGDQYGNLMNESG 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ HI M R L G+KPI +FDG +K + KR R++ I+ + E
Sbjct: 61 ETTSHISGLMSRTIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLIKAKEE- 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + + V ++ E ++L + I +P EA+AQ FL + A TE
Sbjct: 120 NLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQG---------------VEFQCSMLQKNKDLSFGGFTKQM 215
D+D + FG +I ++ E + K L+ F
Sbjct: 180 DADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEF---- 235
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
++ CIL GCDY ++ G+G K A+ LI ++ + +IK++ + VP ++
Sbjct: 236 -IDFCILCGCDYCDTIKGIGSKTAYNLIKEYNCIENIIKNIDQNKYQVPANFK 287
>gi|148642785|ref|YP_001273298.1| flap endonuclease-1 [Methanobrevibacter smithii ATCC 35061]
gi|166973703|sp|A5UL52.1|FEN_METS3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148551802|gb|ABQ86930.1| DNA repair flap structure-specific 5'-3' endonuclease
[Methanobrevibacter smithii ATCC 35061]
Length = 327
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 24/308 (7%)
Query: 1 MGIQGLLPLLKSIMIP--IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS----- 53
MG++ LK I+ P I K+L+G +++D ++ L++ LS R+ G P S
Sbjct: 1 MGVK-----LKDIIQPEQIDFKDLKGRAISIDAFNTLYQ-FLSTIRQ-RDGRPLSDSNGN 53
Query: 54 --RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
H+ ++R + + +KPI +FDG +K E ++R ++R+E+ + E ++ +
Sbjct: 54 ITSHLSGILYRNSSMIEKDIKPIYVFDGTPSYLKQETIDQRRQTREESEKKWKEALAKQD 113
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ ++ +SP I ++L + YI A E +AQ +L + AV ++D
Sbjct: 114 TQEARKYAMRSSKLSPYIIESSKKLLTMMGIPYIEAYGEGEAQAAYLVENGDAWAVASQD 173
Query: 172 SDLIPFGCSRIIFKM---DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
D + FG R++ + G + + D++ ++ L++M IL G D+
Sbjct: 174 YDCLLFGAKRVVRNLAINSNLGDLEYYNLKRVLDELDIN-----REQLIDMGILIGTDFS 228
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+ L G+G K A L K + +K+ K + S+ + E V T R P
Sbjct: 229 EGLKGVGAKTALKLAKKGELENKLAKLQEESSHDISEVREIFLNHNVNTNYKIRWKKPAK 288
Query: 289 EDIVHLSC 296
DI+ C
Sbjct: 289 NDIIDFLC 296
>gi|409042314|gb|EKM51798.1| hypothetical protein PHACADRAFT_102664 [Phanerochaete carnosa
HHB-10118-sp]
Length = 384
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 19/322 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL ++ P IKE E G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTAIIAE-HAPNAIKEHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGELLTNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP+ +FDG +K +KR R+E E + G
Sbjct: 60 ETTSHLMGFFYRTIRMVDNGIKPLYVFDGKPPELKSGVLSKRFERREEAKEDEEEAKETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ F ++ V ++ E ++L V ++VAP EA+AQ LA +V A +E
Sbjct: 120 TTEDVDRFSRRQVKVTREQNEECRRLLTLMGVPWVVAPSEAEAQCAELARGGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F S I+ + F + + S + K L + +++CIL GCDYL+
Sbjct: 180 DMDTLTFN-SAILLRHLTFSEARKAPISEINLEKVLEGLEMSMSQFIDLCILLGCDYLEP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHL--KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+ G+G K A LI ++ +V++HL K +SVP E + +A F+ V P +
Sbjct: 239 IKGVGPKSALKLIREYGGLAEVVEHLREKCGGISVPD--EWPWEEAKKLFEKPDV-TPAS 295
Query: 289 EDIVHLSCISDNIGNDLDFLAK 310
E V + ++ +DFL K
Sbjct: 296 E--VEIEWKGPDVEGLVDFLVK 315
>gi|298675706|ref|YP_003727456.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
gi|298288694|gb|ADI74660.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
Length = 338
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 17/295 (5%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
+ I L VA+D Y+ L++ LS R+ G P T+ H+ ++R+ L
Sbjct: 14 VEISNLSNKTVAIDAYNTLYQ-FLSIIRQR-DGTPLQDSKGRTTSHLSGILYRITNLVEE 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
+KP+ +FDG K + KR +SR+ + E + +G + +Y++ Q + I I
Sbjct: 72 DIKPVFVFDGKPPDFKTDTLEKRKQSRENANQKWNEAKEKGLTEEAYKYAQGSARIDDQI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ +L+ + Y+ +P E +AQ + + V ++D D + FG +I +
Sbjct: 132 LDDAKYLLESMGIPYLQSPSEGEAQAAHMVQKGDADYVGSQDYDALLFGAPHVIRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ ++ + + ++L G T+ L+++ + G DY + L +G KRA
Sbjct: 192 GKRKLPGKNTYIDLKPETIDMEENLKSMGITRSKLIDIALCVGTDYNKGLEKIGPKRALK 251
Query: 242 LISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
L+ S +I + +V + V H + P + I+ C
Sbjct: 252 LVKTHDSIKSIIDETGQNIENVDKVKDFFMNPEVTDDYHLKWNRPNKDKIIQFLC 306
>gi|261349732|ref|ZP_05975149.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
gi|288861687|gb|EFC93985.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
Length = 327
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 24/308 (7%)
Query: 1 MGIQGLLPLLKSIMIP--IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTS----- 53
MG++ LK I+ P I K+L+G +++D ++ L++ LS R+ G P S
Sbjct: 1 MGVK-----LKDIIRPEQIDFKDLKGRAISIDAFNTLYQ-FLSTIRQ-RDGRPLSDSNGN 53
Query: 54 --RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
H+ ++R + + +KPI +FDG +K E ++R ++R+E+ + E ++ +
Sbjct: 54 ITSHLSGILYRNSSMIEKDIKPIYVFDGTPSYLKQETIDQRRQTREESEKKWKEALAKQD 113
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ ++ +SP I ++L + YI A E +AQ +L + AV ++D
Sbjct: 114 TQEARKYAMRSSKLSPYIIESSKKLLTMMGIPYIEAYGEGEAQAAYLVENGDAWAVASQD 173
Query: 172 SDLIPFGCSRIIFKM---DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
D + FG R++ + G + + D++ ++ L++M IL G D+
Sbjct: 174 YDCLLFGAKRVVRNLAINSNLGDLEYYNLKRVLDELDIN-----REQLIDMGILIGTDFS 228
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKT 288
+ L G+G K A L K + +K+ K + S+ + E V T R P
Sbjct: 229 EGLKGVGAKTALKLAKKGELENKLAKLQEESSHDISEVREIFLNHNVNTDYKIRWKKPAK 288
Query: 289 EDIVHLSC 296
DI+ C
Sbjct: 289 NDIIDFLC 296
>gi|343172070|gb|AEL98739.1| endonuclease, partial [Silene latifolia]
gi|343172072|gb|AEL98740.1| endonuclease, partial [Silene latifolia]
Length = 325
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 29/288 (10%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECE 107
+ H+ R L G+KP+ +FDG +K ++ KR R E+L+ AIE
Sbjct: 60 EVTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLSAAIE-- 117
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
EG+ +F ++ V ++ + ++L V + AP EA+AQ L + +V AV
Sbjct: 118 -EGDKEGIEKFSKRTVKVTKQHNEDCKKLLGLMGVPVVEAPSEAEAQCAALCKNGKVYAV 176
Query: 168 ITEDSDLIPFG-CSRIIFKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
+ED D + FG C + MD + + EF + + + +L+ F +++CILS
Sbjct: 177 ASEDMDSLTFGACKFLRHLMDPSSKKIPVMEFDMAKVLEELNLTMDQF-----IDLCILS 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL---KYSTVSVPPFYE 268
GCDY ++ G+G A LI + S + ++++L +Y P+ E
Sbjct: 232 GCDYCDNIKGIGGMTALKLIRQHGSIETILENLNKERYQIADDWPYQE 279
>gi|189191944|ref|XP_001932311.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973917|gb|EDU41416.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 395
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 24 GCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLP 83
C ++ YS+L + + + T+ H+ +R + G+KP+ +FDG
Sbjct: 32 AICRSMSIYSFLIAVRSDGQQLMSETGETTSHLMGLFYRTMRMVDNGIKPLYVFDGAPPK 91
Query: 84 MKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVS 143
+K + KR + + E A A E + G + +F ++ V ++ E ++LK +
Sbjct: 92 LKSGELAKRFQRKTEAHAAAEEAKETGTAEDVEKFSRRTVRVTREHNEECQRLLKLMGIP 151
Query: 144 YIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKN 203
YIVAP EA+AQ LA +V A +ED D + F I+ + F + + + +
Sbjct: 152 YIVAPTEAEAQCAALARGGKVYAAASEDMDTLTFDTP-ILLRHLTFSEQRKEPILEIHLD 210
Query: 204 KDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYST--- 260
K L ++ +++CIL GCDYL + G+G A LI + + V++H+K +
Sbjct: 211 KVLEGLQMERKQFIDLCILLGCDYLDPIKGIGPSTALKLIREHNDLEGVVEHIKSQSSKK 270
Query: 261 VSVPPFYEESFGKAVLTF 278
+++P + F A L F
Sbjct: 271 LTIPDDW--PFADARLLF 286
>gi|390961742|ref|YP_006425576.1| flap endonuclease-1 [Thermococcus sp. CL1]
gi|390520050|gb|AFL95782.1| flap endonuclease-1 [Thermococcus sp. CL1]
Length = 341
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 25/320 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I ++ L G VA+D ++ +++ LS R+ +G TS H+ +R L
Sbjct: 14 IELEGLYGRKVAIDAFNAMYQ-FLSTIRQRDGTPLMDSRGRITS-HLSGFFYRTINLMEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP +FDG K ++ KR +R++ R E G+ + ++ +A ++ +
Sbjct: 72 GIKPAYVFDGKPPEFKRKEIEKRREAREKAEERWHEALERGDLEEAKKYAMRATRVNEGL 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++ ++L+ + I AP E +AQ ++A K+V A ++D D + FG R++ +
Sbjct: 132 INDAKKLLELMGIPVIQAPSEGEAQAAYMAAKKKVYASASQDYDSLLFGAPRLVRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G+ VE + ++ + L G ++ L+EM IL G DY + G+G K+A
Sbjct: 192 GRRKLPGKNAYVEVKPELVVLEEVLKELGVDREKLIEMAILVGTDYNPGGIKGIGPKKAL 251
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC---- 296
++ + K D + K+ K S V + E V + +P E I+ C
Sbjct: 252 TIVKRTK--DPLRKYQKDSDVDLYAIKEFFLNPPVTDEYELKWREPDEEGIIRFLCDEHD 309
Query: 297 -ISDNIGNDLDFLAKGIAIG 315
+ + N ++ L K + G
Sbjct: 310 FSEERVKNGIERLKKAVKAG 329
>gi|317374922|sp|Q013G9.2|FEN1_OSTTA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 389
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 17/320 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCC-----VAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL S P ++E + VA+D +++ ++ R + L
Sbjct: 1 MGIKGLTALL-SENAPGAMREQKFTSYLDRRVAIDASMHIYQFMIAVGRTGEQTLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ + R + + G+KP+ +FDG MK + KR R+E A G
Sbjct: 60 EVTSHLQGMLMRTSRMLEAGIKPVYVFDGKPPTMKGGELAKRKDKREEAEAALKAAREAG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N + ++ V +S + E++++ + + AP EA+A + + V AV TE
Sbjct: 120 NQEEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAGLVWAVGTE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F R+ + + E K ++ G T +++CIL GCDY +
Sbjct: 180 DMDTLTFAAPRVARNL-MAPKSAEKPVLEFDYEKTIAGLGLTADQFIDLCILCGCDYTDT 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTED 290
+ G+G K A LI + S +K+++ + T PP + F A F++ V D
Sbjct: 239 IRGVGPKTALKLIKEHGSIEKILEAI--DTEKYPPPKDWEFAGARELFKNPEVMDVSG-- 294
Query: 291 IVHLSCISDNIGNDLDFLAK 310
++LS + + ++FL K
Sbjct: 295 -INLSWKAPDEEGLVEFLVK 313
>gi|317376212|sp|B2VTT3.2|FEN1_PYRTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 16/290 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L L++ P +K+ E G VA+D YS+L + + +
Sbjct: 1 MGIKHLYQLIEE-HTPEAVKKGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMSETGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E A A E + G
Sbjct: 60 TTSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAHAAAEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YIVAP EA+AQ LA +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L ++ +++CIL GCDYL +
Sbjct: 180 MDTLTFDTP-ILLRHLTFSEQRKEPILEIHLDKVLEGLQMERKQFIDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYST---VSVPPFYEESFGKAVLTF 278
G+G A LI + + V++H+K + +++P + F A L F
Sbjct: 239 KGIGPSTALKLIREHNDLEGVVEHIKSQSSKKLTIPDDW--PFADARLLF 286
>gi|354546051|emb|CCE42780.1| hypothetical protein CPAR2_204230 [Candida parapsilosis]
Length = 383
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 128/266 (48%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPHAYKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNEDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + + + EG+
Sbjct: 61 TTSHLSGFFYRTIRMVENNIKPVYVFDGKPPVLKGGELEKRLLRREEAQKQMDQIKDEGS 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ ++ V + E ++L+ + Y+ AP EA+AQ LA +V A +ED
Sbjct: 121 VAEVMKYEKRLVRVGRDQNDEAKKLLELMGIPYVNAPCEAEAQCAELARGGKVYAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + ++ + F + + + ++ + G K +++CIL GCDY +++
Sbjct: 181 MDTLCYEPPYLLRHLT-FAEARKMPIDQITYSEAMEGLGMPKDQFIDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A+ LI + S D ++++L+
Sbjct: 240 KGVGPVTAYKLIKEHGSLDNLVEYLQ 265
>gi|238481386|ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana]
gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|332006194|gb|AED93577.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 383
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 152/334 (45%), Gaps = 29/334 (8%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL S M + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R L G+KP+ +FDG +K ++ KR R + A GN
Sbjct: 61 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ ++ V ++ + ++L+ V + A EA+AQ L S +V V +ED
Sbjct: 121 KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASED 180
Query: 172 SDLIPFGCSRIIFK-MDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + FG + + MD + + EF+ + + + L+ F +++CILSGCDY
Sbjct: 181 MDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQF-----IDLCILSGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYEES--FGKA-VLTFQHQ 281
S+ G+G + A LI + S + ++++L +P P+ E F + V+T + Q
Sbjct: 236 CDSIRGIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITDEEQ 295
Query: 282 ---RVYDPKTEDIVHLSCISDNIGNDLDFLAKGI 312
+ P E IV +++N G ++D + K I
Sbjct: 296 LDIKWTSPDEEGIVQF-LVNEN-GFNIDRVTKAI 327
>gi|124028216|ref|YP_001013536.1| flap endonuclease-1 [Hyperthermus butylicus DSM 5456]
gi|166973697|sp|A2BMI0.1|FEN_HYPBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|123978910|gb|ABM81191.1| Endonuclease [Hyperthermus butylicus DSM 5456]
Length = 350
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHR-VNLLRH 68
I + L+ VA+D Y+ L++ L+ R+ KG TS H+ +R +NL+ H
Sbjct: 17 IDLAHLKYKVVAIDAYNALYQ-FLTAIRQPDGTPLMDSKGRITS-HLSGLFYRTINLMEH 74
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
G+K + +FDG MK + +R R + E + + E +G++ A+ + Q A ++
Sbjct: 75 -GIKIVYVFDGKPPEMKYLEIERRKRVKSEAVKKYEEAVKKGDTKAARRYAQMAARLTDE 133
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+ + ++L V ++ AP E +AQ F+A A ++D D + FG R++ +
Sbjct: 134 MVEDAKKLLDAMGVPWVQAPAEGEAQAAFMARRGDAWAAASQDYDSLLFGSPRLVRNLAI 193
Query: 189 FGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA 239
G+ VE + +++ +K L G T++ L+ + IL G DY + G+G K A
Sbjct: 194 TGRRKLPRKDVYVEIKPELIELDKLLKALGITREQLVALGILIGTDYNPDGVKGIGPKTA 253
Query: 240 HALISKFKSYDKVIKHL 256
++ + K+++ L
Sbjct: 254 LKMVKAHRDPVKLLQGL 270
>gi|83773193|dbj|BAE63320.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 359
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 24 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGT 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 84 AEDVEKFSRRTVRVTRDHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + ++ L ++ +++CIL GCDYL+ +
Sbjct: 144 MDTLCFEAP-ILLRHLTFSEQRKEPILEIHLSRALEGLDMDRKQFIDLCILLGCDYLEPI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI +F S +KV++H++
Sbjct: 203 PKVGPNTALKLIREFGSLEKVVEHME 228
>gi|451927433|gb|AGF85311.1| endonuclease of the XPG family [Moumouvirus goulette]
Length = 431
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 19/269 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIK-----ELEGCCVAVDTYSWLHKGAL---SCSRELC--KGL 50
MGI+GL L++ I ++ + G V+VD +H+ + S +++ KG
Sbjct: 1 MGIKGLPKLIRDITGNYAVRSYKFSKFHGMKVSVDMSLLIHQTVIAMRSNGKDMTNRKGE 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
TS H+ ++++ + G+ PI +FDG +K + + R RS+K+ + +E +
Sbjct: 61 LTS-HLYGILYKMLVFLQNGMTPICVFDGKAPDIKNKTVDLR-RSKKDAAEKKLEVLDDS 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ------V 164
+ +++ S E +L + YI+AP EAD ++LA + V
Sbjct: 119 EDEEYIKNFKQTFTPSKRDIIEAQILLDLMGIPYIIAPGEADVVCSWLAARRDENGKRYV 178
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
+ V ++DSD++ G + M KF + + +++ NK L+ G T + ++C+L G
Sbjct: 179 KGVCSDDSDMLALGAPYLFKDMLKFMSKNK-EVTIISLNKTLTKTGLTMRQFTDLCVLLG 237
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVI 253
CDY ++ G+G K A+ I + S ++VI
Sbjct: 238 CDYCDNIKGVGPKTAYTKIKECGSLEEVI 266
>gi|403414469|emb|CCM01169.1| predicted protein [Fibroporia radiculosa]
Length = 400
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 8/261 (3%)
Query: 1 MGIQGLLPLL---KSIMIPIH-IKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHI 56
MGI+GL LL I H IK L G VA+D +++ ++ G H+
Sbjct: 1 MGIKGLTSLLVEHAPKAIQEHDIKTLFGRKVAIDASMSIYQFLIAPPVLTLNGY---SHL 57
Query: 57 DYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASY 116
+R + G+KP+ +FDG MK +KR R+E E + G +
Sbjct: 58 MGFFYRTIRMVENGIKPLYVFDGKPPEMKAGVLSKRLARREEAKEEGEEAKETGTTEDVD 117
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
F ++ V ++ E ++L + ++VAP EA+AQ LA +V A +ED D +
Sbjct: 118 RFSRRTVKVTREHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSEDMDTLT 177
Query: 177 FGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGL 236
F ++++ F + + S + +K L +++CIL GCDYL+ + G+G
Sbjct: 178 FSAP-VLYRHLTFSEARKQPISEIHLDKALEGLEMNMSQFIDLCILLGCDYLEPIKGIGP 236
Query: 237 KRAHALISKFKSYDKVIKHLK 257
K A L+ + + VI+HL+
Sbjct: 237 KSALKLVREHGNLGAVIEHLQ 257
>gi|363806970|ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|255640175|gb|ACU20378.1| unknown [Glycine max]
Length = 382
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P +KE + G +A+D +++ + R + L
Sbjct: 1 MGIKGLTKLLAD-NAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ R L G+KP+ +FDG +K ++ KR R E E
Sbjct: 60 EVTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETA 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
N +F ++ V ++ + ++L+ V + AP EA+AQ L + +V V++E
Sbjct: 120 NKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYGVVSE 179
Query: 171 DSDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG + + MD + + EF+ + + + +++ F +++CILSGCD
Sbjct: 180 DMDSLTFGAPKFLRHLMDPSSKKIPVMEFEVAKILEELNMTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
Y S+ G+G A LI + S + + ++L +P P+ E
Sbjct: 235 YCDSIRGIGGLTALKLIRQHGSIENIPENLNKERYQIPDNWPYQE 279
>gi|388498254|gb|AFK37193.1| unknown [Lotus japonicus]
Length = 366
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 18 HIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-----TSRHIDYCMHRVNLLRHYGVK 72
I+EL +A+D +++ + R + L + H+ R L G+K
Sbjct: 6 QIRELLRPQIAIDASMSIYQFLIVVGRSGAETLTNEAGEVTSHLQGMFTRTIRLLESGMK 65
Query: 73 PILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHE 132
P+ +FDG MK ++ KR R E E N +F ++ V ++ +
Sbjct: 66 PVYVFDGKPPDMKKQELAKRLSKRAEATEDLSEALKADNKEDIEKFSKRTVKVTKQHNED 125
Query: 133 LIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFK-MDKFGQ 191
++L+ V + AP EA+AQ L + V AV +ED D + FG + + MD +
Sbjct: 126 YKKLLRLMGVPVVEAPSEAEAQCAALCKAGMVYAVASEDMDSLTFGAPKFLRHLMDPSSK 185
Query: 192 GV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKS 248
V EF+ + + + +L+ F +++CILSGCDY ++ G+G + A LI + S
Sbjct: 186 KVPVMEFEVAKILEELNLTMDQF-----IDLCILSGCDYCDNIRGIGGQTALKLIRQHGS 240
Query: 249 YDKVIKHLKYSTVSVP---PFYE 268
+ +++++ +P P+ E
Sbjct: 241 IENILENINKERYQIPEDWPYQE 263
>gi|241958594|ref|XP_002422016.1| structure-specific endonuclease, putative [Candida dubliniensis
CD36]
gi|317374881|sp|B9WLQ5.1|FEN1_CANDC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|223645361|emb|CAX40017.1| structure-specific endonuclease, putative [Candida dubliniensis
CD36]
Length = 372
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 18/270 (6%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K S +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPSAYKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNEDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + EG
Sbjct: 61 TTSHLSGMFYRTIKMVENNIKPVYVFDGKPPVLKGGELEKRLLRREEAQKQKTALGDEGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L+ + + AP EA+AQ LA +V A +ED
Sbjct: 121 VEEVLKFEKRLVRVTREQNEEAKKLLELMGIPCVDAPCEAEAQCAELARGGKVYAAASED 180
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + + F + + ++ ++ TK+ +++CIL GCDY
Sbjct: 181 MDTLCYEPPF-----LLRHLTFSEARKMPIDQIEYKDAIAGLDMTKEQFIDLCILLGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+S+ G+G A LI + S D +++ +K
Sbjct: 236 CESIKGIGQATAFKLIKEHGSLDNIVEWIK 265
>gi|323457006|gb|EGB12872.1| hypothetical protein AURANDRAFT_19112 [Aureococcus anophagefferens]
Length = 396
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 19/274 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIKEL-----EGCCVAVDTYSWLHKGALSCSRELCKGLPTS-- 53
MGI+GL+ ++ P +KEL G VA+D L++ ++ + G P+S
Sbjct: 1 MGIKGLMGVINE-HAPGAVKELVIEGYTGRVVAIDASMSLYQFLIAIRHQGEGGAPSSVL 59
Query: 54 --------RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE 105
HI +R L GV+P+ +FDG MK + KR R+E A A++
Sbjct: 60 TNAEGEQTSHIQGMFNRTIRLLQAGVRPVYVFDGKPPNMKGGELAKRTAKRQEAEA-ALK 118
Query: 106 CESEGNSSASYEFYQKAV-DISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQV 164
+E + + Y + +S ++ Q+L+ V + AP EA+AQ L +
Sbjct: 119 KATENDDAEGISKYSALLTKVSRKDCDDVKQLLRLMGVPVVDAPCEAEAQCAELVRGGKA 178
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
AV TED D + FG +R + M + + + + L G + ++ CIL G
Sbjct: 179 HAVGTEDMDALTFGSTRQLRNMTFTKKSKDDKVLEITHAAVLEGLGLSNAEFVDFCILCG 238
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVI-KHLK 257
CDY ++ G+G K A L+ + S + ++ K LK
Sbjct: 239 CDYTSTIRGVGPKTALKLVKEHGSIEAILAKGLK 272
>gi|322708426|gb|EFZ00004.1| DNA-repair protein rad2 [Metarhizium anisopliae ARSEF 23]
Length = 395
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + +
Sbjct: 1 MGIKQLFQIIKE-EAPEAIKEGEIKNHFGRKVAIDASMSIYSFLIAVRSDGQQLMNDSGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + +I+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPFIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + +K L + +++CIL GCDYL +
Sbjct: 180 MDTLCFNTP-ILLRHLTFSEQRKEPIQEIHLDKVLEGLNMERSQFVDLCILLGCDYLDPV 238
Query: 232 PGMGLKRAHALISKFKSYDKVI 253
P +G A LI + + + V+
Sbjct: 239 PKVGPTTALKLIREHGTLENVV 260
>gi|62859561|ref|NP_001017005.1| flap endonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 382
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 152/350 (43%), Gaps = 31/350 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ + P IKE + G VAVD +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIADVA-PAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDGNMLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG MK + KR+ R E E G
Sbjct: 60 TTSHLMGMFYRTIRMIEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V Y+ AP EA+A L + +V A TED
Sbjct: 120 VENIEKFNKRLVKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGKVYAAATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + N+ + G + + +++CIL G DY +++
Sbjct: 180 MDALTFG-TPVLLRHLTASEAKKLPIQEFHLNRVMQDMGVSHEQFVDLCILLGSDYCETI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD------ 285
G+G KRA LI + KS ++++ ++ +P + + + F V D
Sbjct: 239 RGIGPKRAIDLIRQHKSIEEIVDNIDLKKYPIPENWLHKEARQL--FLEPEVVDTESTEL 296
Query: 286 ----PKTEDIVHLSCI-----SDNIGNDLDFLAK---GIAIGDLDPFTQL 323
P E +V C D I N L+K G G LD F ++
Sbjct: 297 KWIEPDEEGLVAFMCAEKQFSEDRIRNGAKKLSKNRQGSTQGRLDDFFKV 346
>gi|119493310|ref|XP_001263845.1| Flap endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|317374917|sp|A1D8A4.1|FEN1_NEOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119412005|gb|EAW21948.1| Flap endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 395
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK + YI AP EA+AQ LA + +V A +ED D + F I+ + F + +
Sbjct: 143 KLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ N+ L G ++ +++CIL GCDYL+ +P +G A LI + S +KV++
Sbjct: 202 EPIQEIHLNRTLEGLGMDRKQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AIE 264
>gi|303312977|ref|XP_003066500.1| DNA-repair protein Rad2, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106162|gb|EER24355.1| DNA-repair protein Rad2, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 359
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR ++E + E + G
Sbjct: 24 TTSHLMGFFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRMARKQEAAEQHEEAKETGT 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 84 AEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + + L G ++ +++CIL GCDY+ +
Sbjct: 144 MDTLCFD-SPILLRHLTFSEQRKEPIQEIHLERVLEGLGMDRKQFVDLCILLGCDYVDPI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A +I S +KV++ ++
Sbjct: 203 PKVGPNTALKMIRDHGSLEKVVEAME 228
>gi|238506000|ref|XP_002384202.1| Flap endonuclease Rad27, putative [Aspergillus flavus NRRL3357]
gi|317151109|ref|XP_001824453.2| DNA repair protein rad2 [Aspergillus oryzae RIB40]
gi|317374884|sp|B8NV37.1|FEN1_ASPFN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220690316|gb|EED46666.1| Flap endonuclease Rad27, putative [Aspergillus flavus NRRL3357]
gi|391868743|gb|EIT77953.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 395
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTRDHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + ++ L ++ +++CIL GCDYL+ +
Sbjct: 180 MDTLCFEAP-ILLRHLTFSEQRKEPILEIHLSRALEGLDMDRKQFIDLCILLGCDYLEPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI +F S +KV++H++
Sbjct: 239 PKVGPNTALKLIREFGSLEKVVEHME 264
>gi|330689547|pdb|3Q8K|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Product 5'-Flap Dna, Sm3+, And K+
gi|330689551|pdb|3Q8L|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Substrate 5'-Flap Dna, Sm3+, And K+
Length = 341
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 140/302 (46%), Gaps = 19/302 (6%)
Query: 2 GIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCKG 49
GIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 GIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE- 58
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 59 --TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAA 116
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A T
Sbjct: 117 GAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAAT 176
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG S ++ + + + ++ L G ++ +++CIL G DY +
Sbjct: 177 EDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCE 235
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 SIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHQLFLEPEVLDPESV 293
Query: 290 DI 291
++
Sbjct: 294 EL 295
>gi|194377686|dbj|BAG63206.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 3/240 (1%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++ G
Sbjct: 24 TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGA 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E +L + Y+ AP EA+A L + +V A TED
Sbjct: 84 EQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG S ++ + + + ++ L G ++ +++CIL G DY +S+
Sbjct: 144 MDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
G+G KRA LI K KS +++++ L + VP + +A F V DP++ ++
Sbjct: 203 RGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHQLFLEPEVLDPESVEL 260
>gi|126460720|ref|YP_001056998.1| flap endonuclease-1 [Pyrobaculum calidifontis JCM 11548]
gi|166973705|sp|A3MY15.1|FEN_PYRCJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126250441|gb|ABO09532.1| flap endonuclease 1 [Pyrobaculum calidifontis JCM 11548]
Length = 346
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 127/255 (49%), Gaps = 21/255 (8%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I ++ L G CVA+D Y+ L++ S + G P + H+ +R L
Sbjct: 18 IKLESLAGKCVALDAYNALYQFLASIRQ--PDGTPLMDRAGRITSHLSGLFYRTINLLEA 75
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
GVKP+ +FDG K+ + +R +++++ L + EG ++ ++A+ ++ +
Sbjct: 76 GVKPVYVFDGKPPEFKLLEIEQRKKAKEKALEEVEKAIREGRREDVAKYAKRAIFLTSEM 135
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM--- 186
+ ++L + ++ AP E +AQ +A AV ++D D + FG R++ +
Sbjct: 136 VEDAKKLLTYMGIPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSLLFGSPRLVRNLAVS 195
Query: 187 --DKFGQG-VEFQCSMLQKN---KDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA 239
K G+ VE +++ + K L G ++ L+++ IL G DY + +PG+G ++A
Sbjct: 196 PKRKVGEEVVELSPELIELDAVLKSLKLKG--REQLIDLAILLGTDYNPEGVPGVGPQKA 253
Query: 240 HALISKFKSYDKVIK 254
LI +F S +K+++
Sbjct: 254 LKLIWEFGSLEKLLQ 268
>gi|297812863|ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
gi|297320152|gb|EFH50574.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 152/334 (45%), Gaps = 29/334 (8%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL S M + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R L G+KP+ +FDG +K ++ KR R + A GN
Sbjct: 61 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ ++ V ++ + ++L+ V + A EA+AQ L S +V V +ED
Sbjct: 121 KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASED 180
Query: 172 SDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + FG + + MD + + EF+ + + + L+ F +++CILSGCDY
Sbjct: 181 MDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQF-----IDLCILSGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYEES--FGKA-VLTFQHQ 281
S+ G+G + A LI + S + ++++L +P P+ E F + V+T + Q
Sbjct: 236 CDSIRGIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITDEEQ 295
Query: 282 ---RVYDPKTEDIVHLSCISDNIGNDLDFLAKGI 312
+ P E IV +++N G ++D + K I
Sbjct: 296 LDIKWTSPDEEGIVQF-LVNEN-GFNIDRVTKAI 327
>gi|407414008|gb|EKF35678.1| hypothetical protein MOQ_002324 [Trypanosoma cruzi marinkellei]
Length = 393
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 21/287 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSC-------SRELCK 48
MGI GL LL P I+E E G +A+D +++ ++ EL
Sbjct: 1 MGILGLSKLLYD-RSPAAIRERELKNYFGRRIAIDASMTIYQFIIAMKGFQDGQGMELTN 59
Query: 49 --GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE- 105
G TS H++ R + G++PI +FDG +K + +R R R E + +
Sbjct: 60 EAGEVTS-HLNGLFARTLRMVDEGLRPIYVFDGKPPTLKASELQER-RQRAEEAQQLFDT 117
Query: 106 CESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE 165
+ EGN + ++ V +S E ++L+ + + AP EA+AQ L +
Sbjct: 118 AKEEGNDELMEKMSKRTVRVSREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAW 177
Query: 166 AVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGC 225
AV TED D + FG ++ + + + + + ++ L G T +++CIL GC
Sbjct: 178 AVATEDMDALTFGAP-VMLRHLTYSEAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGC 236
Query: 226 DYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEES 270
DY+ +PG+G ++A I K + +++ L SVP YEE+
Sbjct: 237 DYVPKIPGIGPQKAWEGIKKHGDIETLLQSLDAGRHSVPEGFHYEEA 283
>gi|449549056|gb|EMD40022.1| hypothetical protein CERSUDRAFT_132799 [Ceriporiopsis subvermispora
B]
Length = 409
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL L+ + + IK L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTSLIVENSPNAISEHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGELLTNDAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 61 TTSHLMGFFYRTIRMVENGIKPAYVFDGKPPELKAGVLSKRFERREEAKEEGEEAKEVGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++L + ++VAP EA+AQ LA +V A +ED
Sbjct: 121 AEDVERFTRRTVKVTKEHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + S + K L +++CIL GCDYL+ +
Sbjct: 181 MDTLTF-ASPILLRHLTFSEARKTPISEINLQKALDGLEMNMSQFIDLCILLGCDYLEPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A LI + S VI+HL+
Sbjct: 240 KGVGPKSALKLIKEHGSLGNVIEHLR 265
>gi|148234716|ref|NP_001080984.1| flap endonuclease 1-B [Xenopus laevis]
gi|82071413|sp|P70054.1|FEN1B_XENLA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B;
Short=xFEN-1b
gi|1549393|gb|AAB08478.1| XFEN1b [Xenopus laevis]
gi|213623174|gb|AAI69390.1| Flap endonuclease 1 [Xenopus laevis]
gi|213626408|gb|AAI69394.1| Flap endonuclease 1 [Xenopus laevis]
Length = 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 151/351 (43%), Gaps = 33/351 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELC-----KGL 50
MGI GL L+ + P IKE + G VAVD +++ ++ ++ +G
Sbjct: 1 MGIHGLAKLIADVA-PAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDGNMLQNEEGE 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
TS + + +L H G+KP+ +FDG MK + KR+ R E E G
Sbjct: 60 TTSHLMGMFYRTIRMLEH-GIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAG 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+F ++ V ++ E ++L + Y+ AP EA+A L + +V A TE
Sbjct: 119 EVENIEKFNKRLVKVTKQHNEECKKLLSLMGIPYVDAPCEAEATCAALVKAGKVYAAATE 178
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + FG + ++ + + + N+ G + +++CIL G DY ++
Sbjct: 179 DMDALTFG-TPVLLRHLTASEAKKLPIQEFHLNRVFQDIGINHEQFVDLCILLGSDYCET 237
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP----------FYEESFGKAVLTFQH 280
+ G+G KRA LI + K+ +++I ++ +P F E A +T
Sbjct: 238 IRGIGPKRAIDLIRQHKTIEEIIDNIDLKKYPIPENWLHKEARQLFLEPEVIDADIT--E 295
Query: 281 QRVYDPKTEDIVHLSC-----ISDNIGNDLDFLAK---GIAIGDLDPFTQL 323
+ +P E +V C D I N LAK G G LD F ++
Sbjct: 296 LKWTEPDEEGLVAFMCGEKQFSEDRIRNGAKKLAKNRQGSTQGRLDDFFKV 346
>gi|440301029|gb|ELP93476.1| Flap endonuclease, putative [Entamoeba invadens IP1]
Length = 374
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 20/282 (7%)
Query: 1 MGIQGLLPLLKSI----MIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MGI+GL LL+ M I + G VA+D +++ + + L
Sbjct: 1 MGIKGLSKLLQRYAPNSMKDGKIDQYFGRVVAIDASILVYQFISAVRDQEGSTLVNEYGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ HI +R L GVKPI +FDG MK E+ KR + KE + + + + G+
Sbjct: 61 TTSHIIGTFYRTIKLMTSGVKPIYVFDGKPPEMKTEELKKRQTNAKEAIEKLEKAKESGD 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ ++ + ++ ++++ + I A EA+ L S + A TED
Sbjct: 121 KEEIKKQMKRTARMTKEQSDDVKKLVELMGIPAIEANCEAEGTCAELVKSGKCFATATED 180
Query: 172 SDLIPFGCSRIIFKM---DKFGQGV-EFQC-SMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D + G ++ K D + + E+ S+L++ GFT M +++CIL GCD
Sbjct: 181 MDALTLGSDIVLRKFSASDNKKEPIREYSLKSILEET------GFTMDMFIDLCILLGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
Y +++ G+G A +I ++K+ + ++KHL VP ++
Sbjct: 235 YCETIKGIGPVTAFEMIKEYKTIENLLKHLDKGKYIVPDGWK 276
>gi|317374880|sp|C4YLS2.1|FEN1_CANAW RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238879915|gb|EEQ43553.1| structure-specific endonuclease RAD27 [Candida albicans WO-1]
Length = 372
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 23/286 (8%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K S +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPSAYKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNEDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + EG
Sbjct: 61 TTSHLSGMFYRTIKMVENNIKPVYVFDGKPPVLKGGELEKRLLRREEAQKQKTALGDEGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L+ + + AP EA+AQ LA +V A +ED
Sbjct: 121 VEEVLKFEKRLVRVTREQNEEAKKLLQLMGIPCVDAPCEAEAQCAELARGGKVYAAASED 180
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + + F + + ++ ++ TK+ +++CIL GCDY
Sbjct: 181 MDTLCYEPPF-----LLRHLTFSEARKMPIDQIEYKDAIAGLDMTKEQFIDLCILLGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHL-----KYSTVSVPPFYE 268
+S+ G+G A LI + S D +++ + KY+ PF E
Sbjct: 236 CESIKGIGQATAFKLIKEHGSLDNIVEWIKNNKTKYTLPENWPFDE 281
>gi|328852744|gb|EGG01887.1| hypothetical protein MELLADRAFT_110505 [Melampsora larici-populina
98AG31]
Length = 385
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 10/274 (3%)
Query: 1 MGIQGLLPLLKSI----MIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MGI+GL L+ + + IK L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTALINDLAPDAITQSEIKTLFGRKVAIDASMSIYQFLIAVRQQDGQQLMNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K KR R E E + G
Sbjct: 61 TTSHLMGFFYRTIRMAENGIKPAYVFDGKPPQLKSGVLAKRFEKRTEAAEEGEEAKEVGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++ E ++L + +++AP EA+AQ L V +ED
Sbjct: 121 TEDLDKLTRRTVKVTREHNEECRRLLTLMGIPWVIAPSEAEAQCAELCKGGLVYGAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + F + + + + +K L+ T + ++ CIL GCDY+ L
Sbjct: 181 MDTLTFG-TPLLLRHLTFSEARKVPINTVNLSKVLAGLDLTMERFIDFCILCGCDYVDPL 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP 265
G+ K A LI + S + V+ HL+ + + PP
Sbjct: 240 KGVAAKTALKLIKEHGSLEAVVDHLQQTGKNPPP 273
>gi|320036635|gb|EFW18574.1| flap endonuclease [Coccidioides posadasii str. Silveira]
gi|392864029|gb|EAS35174.2| flap endonuclease 1 [Coccidioides immitis RS]
Length = 395
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGETTSHLMGFFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR ++E + E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRMARKQEAAEQHEEAKETGTAEDVEKFSRRTVRVTREHNEECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK + YI AP EA+AQ LA + +V A +ED D + F S I+ + F + +
Sbjct: 143 KLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFD-SPILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ + L G ++ +++CIL GCDY+ +P +G A +I S +KV++
Sbjct: 202 EPIQEIHLERVLEGLGMDRKQFVDLCILLGCDYVDPIPKVGPNTALKMIRDHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AME 264
>gi|448738796|ref|ZP_21720817.1| flap endonuclease-1 [Halococcus thailandensis JCM 13552]
gi|445801182|gb|EMA51526.1| flap endonuclease-1 [Halococcus thailandensis JCM 13552]
Length = 325
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 11/236 (4%)
Query: 16 PIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HY 69
PI EL G VA+D ++WL++ + + + T+ + + V +++ +
Sbjct: 14 PIEFSELAGATVAIDAHNWLYRYLTTTVKWTSDAIYTTAAGEEVANLVGVVQGLPKFFEH 73
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
+ P+++FDGG+ +K ++ +R +++ RA E G++ + + ++ +I
Sbjct: 74 DITPVMVFDGGVTDLKTDEIEQRREQKEKAAKRAKEAREAGDAVEAARLESRTQRLTDTI 133
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++L +V + AP E +AQ +A + V+ +ED D + FG R + +
Sbjct: 134 HETTRELLALLDVPIVEAPAEGEAQAAHMARTGTVDYAGSEDYDTLLFGAPRTLRDLTSK 193
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISK 245
G + +C L D T + L+++ IL G D+ + G+G K A L+ +
Sbjct: 194 G---DPECMALDATLDEH--DLTWEQLVDVGILCGTDFNDGVSGIGPKTAVKLVGE 244
>gi|68477053|ref|XP_717504.1| hypothetical protein CaO19.8182 [Candida albicans SC5314]
gi|68477234|ref|XP_717410.1| hypothetical protein CaO19.547 [Candida albicans SC5314]
gi|74586103|sp|Q5A6K8.1|FEN1_CANAL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46439119|gb|EAK98441.1| hypothetical protein CaO19.547 [Candida albicans SC5314]
gi|46439217|gb|EAK98538.1| hypothetical protein CaO19.8182 [Candida albicans SC5314]
Length = 372
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 18/270 (6%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K S +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPSAYKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNEDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + EG
Sbjct: 61 TTSHLSGMFYRTIKMVENNIKPVYVFDGKPPVLKGGELEKRLLRREEAQKQKTALGDEGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L+ + + AP EA+AQ LA +V A +ED
Sbjct: 121 VEEVLKFEKRLVRVTREQNEEAKKLLQLMGIPCVDAPCEAEAQCAELARGGKVYAAASED 180
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + + F + + ++ ++ TK+ +++CIL GCDY
Sbjct: 181 MDTLCYEPPF-----LLRHLTFSEARKMPIDQIEYKDAIAGLDMTKEQFIDLCILLGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+S+ G+G A LI + S D +++ +K
Sbjct: 236 CESIKGIGQATAFKLIKEHGSLDNIVEWIK 265
>gi|317374932|sp|B0XZ33.2|FEN1_ASPFC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK + YI AP EA+AQ LA + +V A +ED D + F I+ + F + +
Sbjct: 143 KLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ N+ L G ++ +++CIL GCDYL+ +P +G A LI + S +KV++
Sbjct: 202 EPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AIE 264
>gi|317374927|sp|Q4WWJ1.2|FEN1_ASPFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK + YI AP EA+AQ LA + +V A +ED D + F I+ + F + +
Sbjct: 143 KLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ N+ L G ++ +++CIL GCDYL+ +P +G A LI + S +KV++
Sbjct: 202 EPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AIE 264
>gi|384433639|ref|YP_005642997.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
gi|261601793|gb|ACX91396.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
Length = 351
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TS 53
MG+ L L+K + + EL+G V++D Y+ L++ L+ R+ G P +
Sbjct: 1 MGVD-LADLVKDVKRELSFSELKGKRVSIDGYNALYQ-FLAAIRQ-PDGTPLMDSQGRVT 57
Query: 54 RHIDYCMHR-VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGN 111
H+ +R +N+L GV PI +FDG P + +E +R R KE R +E +SEG
Sbjct: 58 SHLSGLFYRTINILEE-GVIPIYVFDGK-PPEQKSEELERRRKAKEEAERKLERAKSEGK 115
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ Q + +S + E ++L+ + + AP E +A+ +L A ++D
Sbjct: 116 IEELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQD 175
Query: 172 SDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
D I FG R++ + G+ VE + +++ L G T++ L+++ IL
Sbjct: 176 YDAILFGAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILI 235
Query: 224 GCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS 262
G DY + G+G +RA +I K Y K+ K ++Y +S
Sbjct: 236 GTDYNPDGIRGIGPERALKII---KKYGKIEKAMEYGEIS 272
>gi|190345050|gb|EDK36862.2| hypothetical protein PGUG_00960 [Meyerozyma guilliermondii ATCC
6260]
Length = 338
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KR +KE L + + +
Sbjct: 25 TTSHLSGMFYRTIRLVENGIKPMYVFDGKPPVLKGGELEKRMIRKKEALKQQEDIKDTAT 84
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +++V ++ +E ++L+ + Y+ AP EA+AQ LAV+ +V A +ED
Sbjct: 85 VEEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASED 144
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + ++ + F + + + K + KQ +++CIL GCDY +++
Sbjct: 145 MDTLCYSPPYLLRHL-TFAEARKMPIDQIDYKKAMEGLEMDKQTFIDLCILLGCDYCETI 203
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A LI + S D ++K ++
Sbjct: 204 KGVGPVTAFKLIKEHGSLDNIVKWIE 229
>gi|290997255|ref|XP_002681197.1| predicted protein [Naegleria gruberi]
gi|317374913|sp|D2V434.1|FEN1_NAEGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|284094820|gb|EFC48453.1| predicted protein [Naegleria gruberi]
Length = 387
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 24/285 (8%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDTYSWLHKGALS---CSRELC-KGLPT 52
MGI+GL L+ K + +K G VA+D +++ ++ +L K
Sbjct: 1 MGIKGLSQLILDEAKDSVKEDQLKNYFGRKVAIDASMAMYQFLIALKNTGMDLTDKDGEV 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ + R + YG+KP +FDG +K + KR +KE + + + EG+
Sbjct: 61 TNHLQGLLARTTKMLEYGIKPCYVFDGKPPQLKSGELEKRKERQKEAMEQFALAQEEGDE 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ ++ ++ +++ ++L+ V + AP EA+AQ L V A TED
Sbjct: 121 EKMVMWNKRTTRMTKEQSNDGKKLLRLMGVPVVEAPGEAEAQCAELCKGGLVYATATEDM 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFG------GFTKQMLLEMCILSGCD 226
D + + + + + F + Q ++ +F G T +++CIL GCD
Sbjct: 181 DALTYATPVL-------ARHLTFSEARKQPIQEFTFKQVIEGLGVTVDQFIDICILCGCD 233
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLK---YSTVSVPPFYE 268
Y S+ G+G K+A A+I K+ + + ++K+++ Y S P+ E
Sbjct: 234 YTDSIKGIGPKKALAMIKKYGNIENLLKNIEGKHYQAPSEFPYEE 278
>gi|448526873|ref|XP_003869406.1| hypothetical protein CORT_0D04310 [Candida orthopsilosis Co 90-125]
gi|380353759|emb|CCG23271.1| hypothetical protein CORT_0D04310 [Candida orthopsilosis]
Length = 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 127/266 (47%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K +K L G VA+D L++ ++ + + L
Sbjct: 1 MGVKGLNQLIKEHSPHAYKEFQLKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNEEGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + + + EG
Sbjct: 61 TTSHLSGFFYRTIRMVENNIKPVYVFDGKPPVLKGGELEKRLLRREEAQKQMDQIKDEGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ ++ V + E ++L+ + Y+ AP EA+AQ LA +V A +ED
Sbjct: 121 VDEVMKYEKRLVRVGRDQNDEAKKLLELMGIPYVNAPCEAEAQCAELARGGKVFAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + ++ + F + + + ++ + G K+ +++CIL GCDY +++
Sbjct: 181 MDTLCYEPPYLLRHLT-FAEARKMPIDQITYSEAMEGLGMPKEQFIDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A+ LI + S D ++++L+
Sbjct: 240 KGVGPVTAYKLIKEHGSLDNLVEYLQ 265
>gi|42570539|ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
gi|332006193|gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 453
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 152/334 (45%), Gaps = 29/334 (8%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL S M + G +AVD +++ + R + L
Sbjct: 1 MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R L G+KP+ +FDG +K ++ KR R + A GN
Sbjct: 61 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ ++ V ++ + ++L+ V + A EA+AQ L S +V V +ED
Sbjct: 121 KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASED 180
Query: 172 SDLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + FG + + MD + + EF+ + + + L+ F +++CILSGCDY
Sbjct: 181 MDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQF-----IDLCILSGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYEES--FGKA-VLTFQHQ 281
S+ G+G + A LI + S + ++++L +P P+ E F + V+T + Q
Sbjct: 236 CDSIRGIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITDEEQ 295
Query: 282 ---RVYDPKTEDIVHLSCISDNIGNDLDFLAKGI 312
+ P E IV +++N G ++D + K I
Sbjct: 296 LDIKWTSPDEEGIVQF-LVNEN-GFNIDRVTKAI 327
>gi|389860888|ref|YP_006363128.1| flap endonuclease-1 [Thermogladius cellulolyticus 1633]
gi|388525792|gb|AFK50990.1| flap endonuclease-1 [Thermogladius cellulolyticus 1633]
Length = 353
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 19 IKELEGCCVAVDTYSWLH------KGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVK 72
++ L G V VD Y+ L+ +G G TS H+ +R L G+K
Sbjct: 20 LRVLRGKIVVVDGYNALYQFLAAIRGPDGSPLMDSSGRITS-HLSGLFYRTINLVEEGIK 78
Query: 73 PILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHE 132
P+ +FDG +KI++ +R R+E + E EG+ A+ + + ++ + E
Sbjct: 79 PVYVFDGNPPELKIKELERRKALREEAAKKYEEAVKEGDLEAARRYAMMSSKLTSDMVEE 138
Query: 133 LIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQG 192
++LK + ++ AP E +AQ F+ A ++D D + FG R++ + G+
Sbjct: 139 AKRLLKVMGIPWVQAPAEGEAQAAFMVRRGDAYASASQDYDSLLFGSPRLVRNLTISGKR 198
Query: 193 --------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAHALI 243
VE + +++ +K G T++ L+++ IL G DY + G+G K A LI
Sbjct: 199 KLPRKDAYVEVKPEVIELSKLTEKLGITREQLIDIGILLGTDYNPEGFEGIGPKTALTLI 258
Query: 244 SKFKSYDKVIK 254
+ S +K+ K
Sbjct: 259 RTYGSIEKIPK 269
>gi|320582300|gb|EFW96517.1| 5' to 3' exonuclease, 5' flap endonuclease [Ogataea parapolymorpha
DL-1]
Length = 374
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 18/270 (6%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL L+ + +K L G +A+D L++ ++ ++ L
Sbjct: 1 MGIKGLNALVAENAPRAIRSSEMKSLFGRKIAIDASMCLYQFLIAVRQQDGNQLTNEAGG 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K + KR + R+E +A+E + G
Sbjct: 61 TTSHLMGFFYRTIRMVGNGIKPCYVFDGKPPVLKGGELEKRLKRREEAEQKALELKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
F ++ V ++ + +L+ + Y++AP EA+AQ LA +V A +ED
Sbjct: 121 VEELQRFEKRQVKVTREQNEQAQHLLRLMGIPYVIAPCEAEAQCAELARKGKVYAAASED 180
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + K + EF S + L G +++CIL GCDY
Sbjct: 181 MDTLCYQPPFFLRNVTAAESKKLKVDEFTTSAV-----LEGFGMDINTFVDLCILLGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+++ G+G A LI + S +K+I+ ++
Sbjct: 236 CETIKGIGPVTAFKLIKEHGSIEKIIEFIE 265
>gi|448825476|ref|YP_007418407.1| putative endonuclease of the xpg family [Megavirus lba]
gi|444236661|gb|AGD92431.1| putative endonuclease of the xpg family [Megavirus lba]
Length = 443
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 1 MGIQGLLPLLKSI-----MIPIHIKELEGCCVAVDTYSWLHKGAL---SCSRELC--KGL 50
MGI+GL L+K I M I + +G VAVD +H+ + S R++ KG
Sbjct: 1 MGIKGLPKLIKEITNGSAMKSIQFGKFDGR-VAVDMSLLIHQTVIAMRSNGRDMTNQKGE 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
TS H+ ++++ G+ PI +FDG +K + + R RSRK+ + +E +
Sbjct: 60 LTS-HLYGILYKMLTFLQNGMTPICVFDGKAPEIKNKTVDIR-RSRKDAAEKKLESLEDS 117
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV---------- 160
+ +++ S E +L + YIV+P EAD ++LA
Sbjct: 118 EDEEYIKNFKQTFTPSKKDIQEAQILLDLMGIPYIVSPGEADVVCSWLASRVDPNYIDPE 177
Query: 161 ----SKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSF-------- 208
+ V V ++DSD++ G + M KF + KNKD++
Sbjct: 178 TGKKKRYVTGVCSDDSDMLALGAPYLFKDMLKF----------MTKNKDVTVISLRTTLK 227
Query: 209 -GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKH 255
G T + ++C+L GCDY ++ G+G K A+ +I +F S + VIK+
Sbjct: 228 STGLTMRQFTDLCVLLGCDYCDNIKGIGPKTAYKMIKQFGSLENVIKN 275
>gi|296242726|ref|YP_003650213.1| flap endonuclease 1 [Thermosphaera aggregans DSM 11486]
gi|296095310|gb|ADG91261.1| flap endonuclease 1 [Thermosphaera aggregans DSM 11486]
Length = 353
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 23/282 (8%)
Query: 1 MGI--QGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP------- 51
MG+ + L+P I+I +++ L+G +A+D Y+ L++ L+ R+ G P
Sbjct: 1 MGVNLKDLIPDDAKIVIE-NMRVLKGKVIAIDAYNALYQ-FLAAIRQ-PDGTPLMDSQGR 57
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE-G 110
+ H+ +R L G+K + +FDG +K +E +R R+ KE AR E E G
Sbjct: 58 ITSHLSGLFYRTINLVEEGLKTVYVFDGKPPELKA-RELERRRALKEESARKYEAAVEAG 116
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A+ + A ++ + E ++L V ++ AP E +AQ +LA A ++
Sbjct: 117 DLEAARRYAMMASKLTDEMVKEAKRLLDALGVPWVQAPAEGEAQAAYLAKKGDAYASASQ 176
Query: 171 DSDLIPFGCSRII--------FKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCIL 222
D D + FG R+I K+ + + VE + M++ N L T + L+++ IL
Sbjct: 177 DYDSLLFGSPRLIRNLTISGRRKLPRREEYVEVKPEMIELNTLLLKLSLTLENLIDVGIL 236
Query: 223 SGCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSV 263
G DY + G+G+K+A+ L+ + S +K+ K L S+ V
Sbjct: 237 VGTDYNPEGFEGIGVKKAYQLVKTYGSIEKIPKALLKSSFEV 278
>gi|332157650|ref|YP_004422929.1| flap endonuclease-1 [Pyrococcus sp. NA2]
gi|331033113|gb|AEC50925.1| flap endonuclease-1 [Pyrococcus sp. NA2]
Length = 342
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 152/327 (46%), Gaps = 30/327 (9%)
Query: 14 MIP---IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRV 63
+IP I ++ L G +A+D + +++ LS R+ KG TS H+ +R
Sbjct: 8 LIPRKEIELENLYGKKIAIDALNAIYQ-FLSTIRQRDGTPLMDSKGRMTS-HLSGLFYRT 65
Query: 64 NLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAV 123
L G+KP+ +FDG K ++ KR +R+E + E + G+ + ++ Q+A
Sbjct: 66 INLMEAGIKPVYVFDGKPPEFKKKELEKRREAREEAEVKWREALARGDIEEARKYAQRAT 125
Query: 124 DISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRII 183
++ + + Q+L+ + + AP E +AQ ++A+ V A ++D D + FG R++
Sbjct: 126 KVNEMLIEDAKQLLQLMGIPIVQAPSEGEAQAAYMAMKGDVYASASQDYDSLLFGAPRLV 185
Query: 184 FKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGM 234
+ G+ VE + ++ L+ T++ L+E+ IL G DY + G+
Sbjct: 186 RNLTITGKRKMPGKDVYVEVKPELIILEDVLNQLKITREKLIELAILVGTDYNPGGIKGI 245
Query: 235 GLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY-DPKTEDIVH 293
G K+A ++ S D + K K S V + +E F +T ++ + +P E I+
Sbjct: 246 GPKKALEIVK--YSKDPLAKFQKQSDVDLYQI-KEFFLNPPVTDEYSLTWKEPDEEGIIR 302
Query: 294 LSC-----ISDNIGNDLDFLAKGIAIG 315
C + + N ++ L K I G
Sbjct: 303 FLCDEHDFSEERVKNGIERLKKAIKAG 329
>gi|115402747|ref|XP_001217450.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
gi|114189296|gb|EAU30996.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
Length = 402
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 67 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKTEATEAHEEAKETGT 126
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 127 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 186
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + ++ L + +++CIL GCDYL+ +
Sbjct: 187 MDTLCFEAP-ILLRHLTFSEQRKEPIQEIHLSRALEGLDMDRAKFIDLCILLGCDYLEPI 245
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV+++++
Sbjct: 246 PKVGPNTALKLIRDHGSLEKVVEYIQ 271
>gi|71000637|ref|XP_755000.1| Flap endonuclease Rad27 [Aspergillus fumigatus Af293]
gi|66852637|gb|EAL92962.1| Flap endonuclease Rad27, putative [Aspergillus fumigatus Af293]
Length = 394
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 59 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGT 118
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 119 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 178
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + N+ L G ++ +++CIL GCDYL+ +
Sbjct: 179 MDTLCFEAP-ILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPI 237
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ ++
Sbjct: 238 PKVGPNTALKLIREHGSLEKVVEAIE 263
>gi|28380019|sp|Q976H6.2|FEN_SULTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|342306106|dbj|BAK54195.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 351
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 157/323 (48%), Gaps = 28/323 (8%)
Query: 6 LLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDY 58
L L++ I + EL+G +++D Y+ L++ L+ R+ G P + H++
Sbjct: 3 LAELVEEIKKELSFAELKGKKISIDAYNALYQ-FLAAIRQ-PDGTPLMDSQGRVTSHLNG 60
Query: 59 CMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN--SSASY 116
+R + G+ PI +FDG K ++ +R + ++E + + ++EG+ +S
Sbjct: 61 LFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGSIKTSELK 120
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
++ Q ++ ++ +A E ++LK + + AP E +A+ ++ + A ++D D +
Sbjct: 121 KYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLL 180
Query: 177 FGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY- 227
FG R+I + G+ VE + +++ + L G T++ L+++ I+ G DY
Sbjct: 181 FGAKRLIRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGTDYN 240
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPK 287
+ G G+K A+ +I K+ S +K I+ + + V EE F +V +PK
Sbjct: 241 PDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRS----LFLKPQVVEPK 296
Query: 288 TEDIVHLSCISDNIGNDLDFLAK 310
E++ + C S+ I LD L K
Sbjct: 297 -ENLELVDCDSNKI---LDILVK 315
>gi|340506781|gb|EGR32852.1| hypothetical protein IMG5_068750 [Ichthyophthirius multifiliis]
Length = 348
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R +L G+KP IFDG K + KR +++ L + G+
Sbjct: 65 TAHLVGLFNRTVMLIDSGIKPAWIFDGKPPEFKSGELTKRQKAKANALEKQKAALDIGDM 124
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ + Q+ + I+ + ++ I++L+ V I AP EA+AQ L +K+V A +TED
Sbjct: 125 EEALKMEQRNLFITKDMKNDAIKMLQLLGVPVIQAPCEAEAQCAALTKAKKVFATVTEDM 184
Query: 173 DLIPFGCSRIIFKMD-KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG ++ ++ K +E +++ + +L T++ +++CIL GCDYL +
Sbjct: 185 DALTFGTPTLLRGLNSKKEPIIEIDYNLMLQELEL-----TQEQFVDLCILCGCDYLVRI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A+ LI + + + VI +++
Sbjct: 240 DGIGPITAYKLIKEHLTLENVIAYME 265
>gi|159128014|gb|EDP53129.1| Flap endonuclease, putative [Aspergillus fumigatus A1163]
Length = 394
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 59 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGT 118
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 119 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 178
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + N+ L G ++ +++CIL GCDYL+ +
Sbjct: 179 MDTLCFEAP-ILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPI 237
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + S +KV++ ++
Sbjct: 238 PKVGPNTALKLIREHGSLEKVVEAIE 263
>gi|367047833|ref|XP_003654296.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
gi|347001559|gb|AEO67960.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
Length = 359
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + +R + ++E E + G
Sbjct: 24 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRFQRKQEANEGLEEAKETGT 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++L+ + YIVAP EA+AQ LA + +V A +ED
Sbjct: 84 AEDVEKFSRRTVRVTKEHNAECQRLLRLMGIPYIVAPTEAEAQCAVLARAGKVYAAASED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + K L ++ +++CIL GCDYL +
Sbjct: 144 MDTLCFDTP-ILLRHLTFSEQRKEPIQEIHLAKVLEGLNMDRKQFVDLCILLGCDYLDPI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI + + +KV++ ++
Sbjct: 203 PKVGPSTALKLIREHGTLEKVVEFMR 228
>gi|399218750|emb|CCF75637.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 177/409 (43%), Gaps = 41/409 (10%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDTYSWLHK-------GALSCSRELCKG 49
MGI+GL L+ I + L G +A+D L++ G + S G
Sbjct: 1 MGIKGLTKLILENAPEGYQEITLANLSGQIIAIDASMTLYQFMIAIRQGNFATSLVNANG 60
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
PTS HI M RV L G++PI +FDG K + KR ++E L +
Sbjct: 61 EPTS-HIAGLMLRVAALLELGIRPIYVFDGEPPQAKSDTLLKRKERKEEALKLLEQAMET 119
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G+ + + V +S + + ++ L+ + + A EA+AQ ++ + T
Sbjct: 120 GDLEEIKKQTSRTVRVSREQSKQAMKFLELCGLPVVEASQEAEAQCAYMVKWGIADVAST 179
Query: 170 EDSDLIPFGCSRIIF-----------KMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM--L 216
ED+D + FG +I K KF + +L+ + + + GF +
Sbjct: 180 EDTDCLTFGTPVLIRNLSNALAISSNKNSKFNSKSP-KSHLLRIDLNKTLNGFKLNINQF 238
Query: 217 LEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE---ESFGK 273
+++CIL GCDY L G+G K A +L+ K+K+ +++I H + + + Y+ ++F
Sbjct: 239 VDLCILCGCDYCGKLKGVGPKTALSLLQKYKTIEEIIAHKEITCIDENFDYKMARDAFLS 298
Query: 274 AVLTFQHQ---RVYDPKTEDIVHLSCISDNIGNDL--DFLAKGIAIGDLDPFTQLPFQEV 328
+ + + +P +++ + +N D F+ K I I + P Q+
Sbjct: 299 PKIVPKEEIKLEWREPNIPELIDFLVVKNNFNQDRVNKFINKLINIRKVKPQQQISSFFK 358
Query: 329 SDNSHLVVGQNSHLK----NFKPESE---RKKLDLPVQKNLLTKKFTTP 370
+ N+ +V ++ ++ + KPE + RK + KN + +TP
Sbjct: 359 AKNTSIVSKSDAKIETTAMSLKPEVKCVIRKDEQISTIKNPTHESLSTP 407
>gi|317374926|sp|Q0CBS0.2|FEN1_ASPTN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKTEATEAHEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + + ++ L + +++CIL GCDYL+ +
Sbjct: 180 MDTLCFEAP-ILLRHLTFSEQRKEPIQEIHLSRALEGLDMDRAKFIDLCILLGCDYLEPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV+++++
Sbjct: 239 PKVGPNTALKLIRDHGSLEKVVEYIQ 264
>gi|116668192|pdb|2IZO|A Chain A, Structure Of An Archaeal Pcna1-Pcna2-Fen1 Complex
Length = 346
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 25/274 (9%)
Query: 7 LPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYC 59
+ L+K + + EL+G V++D Y+ L++ L+ R+ G P + H+
Sbjct: 1 MDLVKDVKRELSFSELKGKRVSIDGYNALYQ-FLAAIRQ-PDGTPLMDSQGRVTSHLSGL 58
Query: 60 MHR-VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGNSSASYE 117
+R +N+L GV PI +FDG P + +E +R R KE R +E +SEG +
Sbjct: 59 FYRTINILEE-GVIPIYVFDGK-PPEQKSEELERRRKAKEEAERKLERAKSEGKIEELRK 116
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPF 177
+ Q + +S + E ++L+ + + AP E +A+ +L A ++D D I F
Sbjct: 117 YSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDYDAILF 176
Query: 178 GCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-L 228
G R++ + G+ VE + +++ L G T++ L+++ IL G DY
Sbjct: 177 GAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIGTDYNP 236
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS 262
+ G+G +RA +I K Y K+ K ++Y +S
Sbjct: 237 DGIRGIGPERALKII---KKYGKIEKAMEYGEIS 267
>gi|304372804|ref|YP_003858300.1| flap endonuclease-1 [Sulfolobus islandicus M.16.27]
Length = 351
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TS 53
MG+ L L+K + + EL+G V++D Y+ L++ L+ R+ G P +
Sbjct: 1 MGVD-LADLVKDVKRELSFSELKGKKVSIDGYNALYQ-FLAAIRQ-PDGTPLMDSHGRIT 57
Query: 54 RHIDYCMHR-VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGN 111
H+ +R +N+L GV PI +FDG P + +E +R R KE R +E +SEG
Sbjct: 58 SHLSGLFYRTINILEE-GVIPIYVFDGK-PPEQKSEELERRRKIKEEAERKLERAKSEGK 115
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ Q + +S + E +L+ + + AP E +A+ +L + A ++D
Sbjct: 116 IEELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNILGFSWAAASQD 175
Query: 172 SDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
D I FG R++ + G+ ++ + +++ L G T++ L+++ IL
Sbjct: 176 YDSILFGAKRLVRNLTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLIDISILI 235
Query: 224 GCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS 262
G DY + G+G +RA +I K Y K+ K ++Y +S
Sbjct: 236 GTDYNPDGIKGIGPERALKII---KKYGKIEKAIEYGEIS 272
>gi|28380021|sp|Q980U8.2|FEN_SULSO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 349
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 133/275 (48%), Gaps = 25/275 (9%)
Query: 6 LLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDY 58
L L+K + + EL+G V++D Y+ L++ L+ R+ G P + H+
Sbjct: 3 LADLVKDVKRELSFSELKGKRVSIDGYNALYQ-FLAAIRQ-PDGTPLMDSQGRVTSHLSG 60
Query: 59 CMHR-VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGNSSASY 116
+R +N+L GV PI +FDG P + +E +R R KE R +E +SEG
Sbjct: 61 LFYRTINILEE-GVIPIYVFDGK-PPEQKSEELERRRKAKEEAERKLERAKSEGKIEELR 118
Query: 117 EFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
++ Q + +S + E ++L+ + + AP E +A+ +L A ++D D I
Sbjct: 119 KYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDYDAIL 178
Query: 177 FGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY- 227
FG R++ + G+ VE + +++ L G T++ L+++ IL G DY
Sbjct: 179 FGAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIGTDYN 238
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS 262
+ G+G +RA +I K Y K+ K ++Y +S
Sbjct: 239 PDGIRGIGPERALKII---KKYGKIEKAMEYGEIS 270
>gi|49619155|gb|AAT68162.1| flap structure specific endonuclease 1 [Danio rerio]
Length = 380
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 21/287 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE E G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-HAPSAIKEHEIKSYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLLAQAQEAGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++L V YI AP EA+A L + +V A TED
Sbjct: 120 QENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATED 179
Query: 172 SDLIPFGCSRIIFKMD----KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
+ FG + ++ + K EF S + ++ +L T Q +++CIL GCDY
Sbjct: 180 MAGLTFGTTVLLRHLTASEAKKLPIQEFHFSRILQDMEL-----THQQFIDLCILLGCDY 234
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEESFG 272
++ G+G KRA LI + S +++++++ + P Y+E+ G
Sbjct: 235 CGTIKGIGPKRAIDLIKQHGSIEEILENIDPNKHRAPEDWLYKEARG 281
>gi|73668744|ref|YP_304759.1| flap endonuclease-1 [Methanosarcina barkeri str. Fusaro]
gi|121723542|sp|Q46D63.1|FEN_METBF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|72395906|gb|AAZ70179.1| flap endonuclease 1 [Methanosarcina barkeri str. Fusaro]
Length = 338
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 17/253 (6%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I + +L VA+D ++ LH+ LS R+ +G TS H+ ++R L
Sbjct: 14 IELSDLTNQVVAIDAFNTLHQ-FLSIIRQRDGNPLVNSRGKVTS-HLSGLLYRTASLIEV 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ IFDG +K E N+R R+ +L + + EG+ A+Y++ Q + + I
Sbjct: 72 GIKPVFIFDGKPPDLKSETLNRRKEVRESSLEKWENAKVEGDLEAAYKYAQASSKVDQEI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ +L + +I AP E +AQ + + K + V ++D D FG +I +
Sbjct: 132 VEDSKYLLSIMGIPWIQAPCEGEAQAAHMVLKKDADYVASQDYDSFLFGAPTVIRNLAVT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + +++ + L G ++ L+++ I G D+ + L +G K A
Sbjct: 192 GKRKLPGKHVYVDVELELIELEETLGVLGINREQLIDIAICVGTDFNKGLEKVGPKTALK 251
Query: 242 LISKFKSYDKVIK 254
LI K V++
Sbjct: 252 LIKKHGDIHAVLR 264
>gi|146423306|ref|XP_001487583.1| hypothetical protein PGUG_00960 [Meyerozyma guilliermondii ATCC
6260]
Length = 338
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KR +KE L + + +
Sbjct: 25 TTSHLLGMFYRTIRLVENGIKPMYVFDGKPPVLKGGELEKRMIRKKEALKQQEDIKDTAT 84
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +++V ++ +E ++L+ + Y+ AP EA+AQ LAV+ +V A +ED
Sbjct: 85 VEEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASED 144
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + ++ + F + + + K + KQ +++CIL GCDY +++
Sbjct: 145 MDTLCYSPPYLLRHL-TFAEARKMPIDQIDYKKAMEGLEMDKQTFIDLCILLGCDYCETI 203
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A LI + S D ++K ++
Sbjct: 204 KGVGPVTAFKLIKEHGSLDNIVKWIE 229
>gi|119872195|ref|YP_930202.1| flap endonuclease-1 [Pyrobaculum islandicum DSM 4184]
gi|166973706|sp|A1RSC7.1|FEN_PYRIL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119673603|gb|ABL87859.1| flap endonuclease 1 [Pyrobaculum islandicum DSM 4184]
Length = 346
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 1 MGIQGLLPLL-KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------T 52
MG+ L L+ K I + ++ L G C+A+D Y+ L++ S + G P
Sbjct: 1 MGVTELGKLIGKDIRREVKLENLAGKCIALDAYNSLYQFLASIRQ--PDGTPLMDRVGRI 58
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R L G+KP+ +FDG K+ + +R + +++ + ++ EG
Sbjct: 59 TSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKVKEKAMEEVLKAIKEGRK 118
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
++ ++AV ++ + + ++L V ++ AP E +AQ +A AV ++D
Sbjct: 119 EDVAKYMKRAVFLTSDMVEDAKKLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDY 178
Query: 173 DLIPFGCSRIIFKM-----DKFGQGV-EFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGC 225
D + FG R++ + K G+ V E +++ + L S ++ L+++ IL G
Sbjct: 179 DSLLFGSPRLVRNLAVSPRRKIGEEVIELSPEIIELDAVLKSLRLKNREQLIDLAILLGT 238
Query: 226 DY-LQSLPGMGLKRAHALISKFKSYDKVIK 254
DY +PG+G ++A L+ +F +K+++
Sbjct: 239 DYNPDGVPGVGPQKALKLVWEFGGLEKMLE 268
>gi|389852752|ref|YP_006354986.1| flap endonuclease-1 [Pyrococcus sp. ST04]
gi|388250058|gb|AFK22911.1| flap endonuclease-1 [Pyrococcus sp. ST04]
Length = 341
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 145/320 (45%), Gaps = 25/320 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I ++ L G VA+D + +++ LS R+ KG TS H+ +R L
Sbjct: 14 IELESLYGRKVAIDALNAIYQ-FLSTIRQRDGTPLMDSKGRITS-HLSGLFYRTINLMEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP +FDG K + KR +R+E + E ++G+ + ++ Q+A ++ +
Sbjct: 72 GIKPAYVFDGKPPEFKKRELEKRKEAREEAEIKWKEALAKGDIEEARKYAQRATRVNEML 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ ++L+ + I AP E +AQ ++A +V A ++D D + FG R++ +
Sbjct: 132 IEDAKKLLELMGIPVIQAPSEGEAQAAYMASKGKVYASASQDYDSLLFGAPRLVRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G+ VE + ++ ++ LS T++ L+E+ IL G DY + G+G K+A
Sbjct: 192 GKRKLPGKNIYVEIKPELIVLDEVLSSLKLTREKLIELAILVGTDYNPGGIKGIGPKKAL 251
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC---- 296
++ S D + K + S V + E V + +P E I+ C
Sbjct: 252 EIVR--HSKDPLAKFQRQSDVDLYAIKEFFLNPPVTDDYKLQWREPDEEGILRFLCDEHD 309
Query: 297 -ISDNIGNDLDFLAKGIAIG 315
+ + N L+ L K + G
Sbjct: 310 FSEERVKNGLERLKKAVKAG 329
>gi|435850378|ref|YP_007311964.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
gi|433661008|gb|AGB48434.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
Length = 338
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 135/295 (45%), Gaps = 17/295 (5%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
+ I EL VAVD Y+ L++ LS R+ G P + H+ ++R+ L
Sbjct: 14 VEISELSHKVVAVDAYNTLYQ-FLSIIRQR-DGTPLKDSRGNITSHLSGILYRMTSLMEE 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG +K KR R++ + E +S+G + +Y + Q + ++ I
Sbjct: 72 GIKPVFVFDGKPSHLKARTIEKRTADREKATIKWEEAKSKGLAEEAYMYAQASSRVTHEI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ ++L + ++ AP E ++Q + V ++D D + FG S ++ +
Sbjct: 132 VEDSRKLLVAMGIPWVDAPSEGESQAAHMVKRGDANYVASQDYDSLLFGASFVVRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + +++ ++L+ + L+E+ + G DY + L +G K+A
Sbjct: 192 GKRKLPKKNIFVDVKPEIMELGENLAELEIDQSQLIEIALCVGTDYNRGLEKIGPKKALK 251
Query: 242 LISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSC 296
LI + +S +KV++ + + + + +V + P T+ IV C
Sbjct: 252 LIKEHRSIEKVLQAVGQNIEDLQEIKDLFLNPSVTDNYTLKWKKPDTDAIVEFLC 306
>gi|297526096|ref|YP_003668120.1| flap structure-specific endonuclease [Staphylothermus hellenicus
DSM 12710]
gi|297255012|gb|ADI31221.1| flap structure-specific endonuclease [Staphylothermus hellenicus
DSM 12710]
Length = 350
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 128/269 (47%), Gaps = 20/269 (7%)
Query: 14 MIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHR-VNL 65
M+ ++ L G V +D Y+ L++ L+ R+ G P + H+ +R +N+
Sbjct: 15 MVIEDLRMLRGRIVVIDGYNALYQ-FLTAIRQ-PDGTPLMDSQGRITSHLSGLFYRTINI 72
Query: 66 LRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDI 125
L + G+KP +FDG +K + KR + R++ + E G+ A+ + + +
Sbjct: 73 LEN-GIKPAYVFDGKPPEIKAREIEKRRKIREDASKKYEEALRRGDVEAARRYAMMSAKL 131
Query: 126 SPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFK 185
+ + H+ ++L + +I A E +AQ ++ A ++D D + FG R+I
Sbjct: 132 TDEMVHDAKKLLDAMGIPWIQAVAEGEAQAAYIVGKGDAWASASQDYDSLLFGSPRLIRN 191
Query: 186 MDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGL 236
+ G+ +E + +++ K L G T++ L+ + +L G DY + G+G
Sbjct: 192 LTISGRRKLPRKNVYIEIKPEIIELKKLLEKLGITREQLIYVALLIGTDYNPDGVKGIGP 251
Query: 237 KRAHALISKFKSYDKVIKHLKYSTVSVPP 265
K+A L+ +K+ DK++K + + V P
Sbjct: 252 KKALQLVKAYKTLDKILKAIPKTEFPVEP 280
>gi|389740276|gb|EIM81467.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 528
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-----LEGCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P IKE L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTALLLE-NAPNSIKEHDIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLTNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP +FDG +K KR R+E E + G
Sbjct: 60 ETTSHLMGFFYRTIRIVENGIKPAYVFDGKPPDLKAGVLAKRFEKREEAKEEGEEAKETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ F ++ V ++ E ++L+ + +VAP EA+AQ LA +V A +E
Sbjct: 120 TAEDVDRFSRRTVRVTREHNAECQRLLRLMGIPVVVAPSEAEAQCAELARGGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F + +F+ F + + + + +K L G +++CIL GCDYL+
Sbjct: 180 DMDTLTF-SAPTLFRHLTFSEAKKAPITEVTLSKALEGLGMKMPQFIDLCILLGCDYLEP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK 257
+ G+G K A LI + +V++HLK
Sbjct: 239 IKGVGPKTALKLIREHGGLKEVLEHLK 265
>gi|296411549|ref|XP_002835493.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629277|emb|CAZ79650.1| unnamed protein product [Tuber melanosporum]
Length = 481
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 8/237 (3%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR+ + E A E + G
Sbjct: 155 TTSHLMGLFYRTLRMVDNGIKPLYVFDGRPPTLKSGELAKRSARKAEATAAHAEAKEVGT 214
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ I E ++L + Y+ AP EA+AQ LA + +V A ++D
Sbjct: 215 AEEVEKFSRRTVRVTKEINDECKRLLTCMGIPYVEAPCEAEAQCAALAKAGKVYAAASDD 274
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F + I+ K + + + ++ + GFT+ +++CIL GCDY ++
Sbjct: 275 MDTLCFE-TPILLKKLMLSEMKKEPVQEIYLDRAMQELGFTRDQFIDLCILLGCDYCDTI 333
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL--KYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
P +G A LI + KS + V+ HL KY+ P+ + A F++ + DP
Sbjct: 334 PKVGPTTALKLIREHKSIENVLSHLGPKYAVPKKWPYQD-----ARELFKNPLITDP 385
>gi|375083121|ref|ZP_09730153.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
gi|374742207|gb|EHR78613.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
Length = 340
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 158/339 (46%), Gaps = 34/339 (10%)
Query: 1 MGIQ--GLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLP 51
MG+Q LLP + + ++ L G VA+D ++ +++ LS R+ KG
Sbjct: 1 MGVQIGELLPRKE-----LELENLNGRKVAIDAFNAIYQ-FLSTIRQRDGTPLMDSKGRI 54
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
TS H+ +R L G+KP +FDG K ++ KRA +R+E + E + G+
Sbjct: 55 TS-HLSGLFYRTINLMEAGIKPAYVFDGKPPEFKKKELEKRAEAREEAQEKWEEALARGD 113
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ Q+A ++ + + ++L+ + ++ AP E +AQ ++A V A ++D
Sbjct: 114 LEEAKKYAQRASKVNEMLIEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGHVWASASQD 173
Query: 172 SDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
D + FG R++ + G+ VE + ++ + L T++ L+E+ IL
Sbjct: 174 YDSLLFGTPRLVRNLTITGKRKLPGKDIYVEVKPELIVLEEVLKELKITREKLVELAILV 233
Query: 224 GCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQR 282
G DY + G+G K+A ++ S D + K+ K S V + +E F T +++
Sbjct: 234 GTDYNPGGIKGIGPKKALEIVK--YSKDPLAKYQKMSDVDLYAI-KEFFLNPPTTDEYKL 290
Query: 283 VYD-PKTEDIVHLSC-----ISDNIGNDLDFLAKGIAIG 315
+ P E I+ C + + N L+ L K + G
Sbjct: 291 EWKMPDEEGILKFLCDEHDFSEERVKNGLERLKKAVKAG 329
>gi|170111659|ref|XP_001887033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|317374862|sp|B0DSN9.1|FEN11_LACBS RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|164638076|gb|EDR02356.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 394
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 12/267 (4%)
Query: 1 MGIQGLLPLL-----KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL K+I IK L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTGLLSQHAPKAIQ-EHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGELLTNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP IFDG +K +KR R+E E + G
Sbjct: 60 ETTSHLMGLFYRTLRIVENGIKPAYIFDGKPPELKKGVLSKRLERREEAKEEGEEAKETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
F ++ V ++ E ++L+ + ++AP EA+AQ LA +V A +E
Sbjct: 120 TVEDVDRFSRRTVKVTREHNEECRRLLRLMGIPVVIAPSEAEAQCAELARGGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F I+F+ F + + S + + L +++CIL GCDYL+
Sbjct: 180 DMDTLTFNAP-ILFRHLTFSEAKKQPISEINLKEALEGLDMNMSQFIDLCILLGCDYLEP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLK 257
+ G+G K A LI ++ V+KHL+
Sbjct: 239 IKGVGPKSALKLIREYGGLKGVVKHLR 265
>gi|223996849|ref|XP_002288098.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977214|gb|EED95541.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 672
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 48/196 (24%)
Query: 144 YIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQG--------VEF 195
+IVAPYEAD Q+ +LA V+ V+TEDSDLI G R+++++ + G
Sbjct: 305 FIVAPYEADGQLAYLANGGLVDLVVTEDSDLIALGVPRLVYRLGGWNGGNSANRSSSSGL 364
Query: 196 QCSMLQKNKDLS------FGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISK-FKS 248
+ ++LQ+ +DL F+ ML M + +GCDY SL G+G+ A ++ + F
Sbjct: 365 KGTILQR-RDLGSSHGIDLMDFSDGMLATMFVATGCDYCDSLKGVGIITARGIVKRAFHG 423
Query: 249 YD--------------KVIKHLKY------STVSVPPF-----------YEESFGKAVLT 277
+ K++ H Y + V + P YE +F A+
Sbjct: 424 GESLENRSPVLDEPVLKLVLHDLYRACHKDARVELLPLSDPEKEEARLVYERAFLAALAM 483
Query: 278 FQHQRVYDP-KTEDIV 292
F+H VYDP E+I+
Sbjct: 484 FRHPLVYDPISGENII 499
>gi|401424227|ref|XP_003876599.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492842|emb|CBZ28120.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 395
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 145/317 (45%), Gaps = 43/317 (13%)
Query: 1 MGIQGLLPLL--KSIMIPIHIKELE-----GCCVAVDT----YSWL--HKG-----ALSC 42
MGI GL LL KS P I+E E G +A+D Y ++ KG L
Sbjct: 1 MGILGLSKLLYDKS---PNAIREQEMKNFFGRRIAIDASMSIYQFIIAMKGFQDGQGLEL 57
Query: 43 SRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLAR 102
+ E KG TS H++ R + G+KPI +FDG P K++ + AR +K
Sbjct: 58 TNE--KGDVTS-HLNGLFARTLRMIDEGIKPIYVFDGK--PPKLKADELEARRQK----- 107
Query: 103 AIECESE-------GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQM 155
A E E E G+ + ++ V +S E ++L+ + I AP EA+AQ
Sbjct: 108 AAEAEKEFEKAKDAGDDEMMEKMSKRTVRVSREQIDESKKLLRLMGIPVIQAPSEAEAQC 167
Query: 156 TFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM 215
L + AV TED D + FG S I+ + + + + ++ L G +
Sbjct: 168 AELVKKGKAWAVGTEDMDALTFG-STIMLRHLNISDAKKRPVAEIHLDEVLQTTGLSMDQ 226
Query: 216 LLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP-FYEESFGKA 274
+++CIL GCDY+ +PG+G ++A I ++ S + ++ L + VP FY + +A
Sbjct: 227 FVDLCILLGCDYVPKVPGIGPQKAWEGIQRYGSIESFLESLDTTKHPVPADFY---YKEA 283
Query: 275 VLTFQHQRVYDPKTEDI 291
FQ+ V + DI
Sbjct: 284 RAFFQNPEVTRAEEIDI 300
>gi|317419778|emb|CBN81814.1| Flap endonuclease 1-B [Dicentrarchus labrax]
Length = 380
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 11/265 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRE----LCKGLP 51
MGI GL L+ P IKE + G +A+D +++ ++ ++ +
Sbjct: 1 MGIHGLAKLIAD-HAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +G+KP+ +FDG +K + KR R E + + G
Sbjct: 60 TTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKLLAQAQEMGE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ + ++L V YI AP EA+A L + +V A TED
Sbjct: 120 QENIDKFSKRLVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + FG + ++ + + + ++ L G T + +++CIL GCDY ++
Sbjct: 180 MDGLTFG-TNVLLRHLTASEAKKLPIQEFHFSRMLQDIGLTNEQFIDLCILLGCDYCATI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL 256
G+G KRA LI + +++++++
Sbjct: 239 KGIGPKRAIDLIRQHGCIEEILENI 263
>gi|371944946|gb|AEX62767.1| putative endonuclease of the XPG family [Moumouvirus Monve]
Length = 343
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 135/272 (49%), Gaps = 19/272 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIK-----ELEGCCVAVDTYSWLHKGAL---SCSRELC--KGL 50
MGI+GL L++ I ++ + G V+VD +H+ + S +++ KG
Sbjct: 1 MGIKGLPKLIREITNGYAVRSYNFSKFHGMKVSVDMSLLIHQTVIAMRSNGKDMKNRKGE 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
TS H+ ++++ + G+ PI +FDG +K + + R RS+K+ + +E +
Sbjct: 61 LTS-HLYGILYKMLVFLQNGMTPICVFDGKAPDIKNKTVDIR-RSKKDAAEKKLEDLDDS 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ------V 164
+ +++ S E +L + YIVAP EAD ++LA + V
Sbjct: 119 EDEEYIKNFKQTFTPSKRDIQEAQILLDLMGIPYIVAPGEADVVCSWLAARRDENGDRYV 178
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
+ V ++DSD++ G + M KF + + +++ NK L+ G T + ++C+L G
Sbjct: 179 KGVCSDDSDMLALGAPYLFKDMLKFMSKNK-EVTIISLNKTLTKTGLTMRQFTDLCVLLG 237
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
CDY ++ G+G K A+ I ++ S ++VIK +
Sbjct: 238 CDYCDNIKGIGPKTAYNKIKEYGSLEEVIKMV 269
>gi|74612809|sp|Q76F73.1|FEN1_COPCI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46092541|dbj|BAD14303.1| flap endonuclease-1 [Coprinopsis cinerea]
Length = 458
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-----LEGCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P IKE L G VA+D +++ ++ + + L
Sbjct: 1 MGIKGLTGLLNE-HAPNSIKEHDIKTLFGRKVAIDASMSIYQFLIAVRQRDGEMLTNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 60 ETTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ F ++ V ++ E ++L+ +V ++AP EA+AQ LA +V A +E
Sbjct: 120 TAEDVDRFSRRTVKVTKQHNEECQKLLRLMSVPCVIAPSEAEAQCAELARGGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM--LLEMCILSGCDYL 228
D D + F I+F+ F + + S + N + + G M +++CIL GCDYL
Sbjct: 180 DMDTLTFNAP-ILFRHLTFSEAKKQPISEI--NLEAALKGLDMDMSQFVDLCILLGCDYL 236
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHL 256
+ + G+G K A LI +F +V++HL
Sbjct: 237 EPIKGVGPKSALKLIREFGGLKEVVEHL 264
>gi|121704724|ref|XP_001270625.1| Flap endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398771|gb|EAW09199.1| Flap endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 401
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 29 IKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPL 88
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 89 YVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEEIEKFSRRTVRVTREHNAECK 148
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK V YI AP EA+AQ LA + +V A +ED D + F I+ + F + +
Sbjct: 149 KLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFSEQRK 207
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ N+ L + ++MCIL GCDYL+ +P +G A LI + S +KV++
Sbjct: 208 EPIQEIHLNRVLEGLDMDRSQFIDMCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVE 267
Query: 255 HLK 257
++
Sbjct: 268 AIE 270
>gi|219125938|ref|XP_002183226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|317374908|sp|B7G7Y7.1|FEN1_PHATC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|217405501|gb|EEC45444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 421
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 22/284 (7%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL LL + + +K L G +A+D +++ ++ G P
Sbjct: 1 MGIKGLAKLLSDEAPDCIREVELKSLHGRKIAIDASMAIYQFLIAVR----SGGPNQQAT 56
Query: 52 --------TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARA 103
T+ HI +R G++P+ +FDG +K + KR R++ A
Sbjct: 57 MLTNAEGETTSHIQGMFNRTIRYMTEGIRPVFVFDGKPPDVKSHELIKRREKREKAQAAL 116
Query: 104 IECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ 163
EGN + ++ V + ++L V + AP EA+AQ L +
Sbjct: 117 AVASEEGNVEEQDKQSKRLVRAGTKENEDCRKLLTLMGVPVVTAPCEAEAQAAALCKAGL 176
Query: 164 VEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
V A TED D + F ++ K+ F + + NK + + +++CI+
Sbjct: 177 VYATGTEDMDALTFATPILVRKL-TFANASKSMVQTMNYNKVIEGLAISHDQFVDLCIML 235
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
GCDY ++ G+G K A LI + + +KVI+ + VP +
Sbjct: 236 GCDYCDTIRGVGPKTALKLIREHGNIEKVIETIDRKKFVVPESW 279
>gi|20092799|ref|NP_618874.1| flap endonuclease-1 [Methanosarcina acetivorans C2A]
gi|28380016|sp|Q8TIY5.1|FEN_METAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19918097|gb|AAM07354.1| FlaP endonuclease-1 [Methanosarcina acetivorans C2A]
Length = 338
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 17/254 (6%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I + +L VAVD ++ LH+ LS R+ +G TS H+ ++R L
Sbjct: 14 IELSDLSNRVVAVDAFNTLHQ-FLSIIRQRDGSPLVNSRGKVTS-HLSGLLYRTASLVEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ IFDG +K E ++R R+ +L + ++EG+ A+Y++ Q + + I
Sbjct: 72 GIKPVFIFDGKPPDLKSETLSRRKEVRETSLEKWENAKAEGDLEAAYKYAQASSRVDQEI 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ +L + +I AP E +AQ + + K + V ++D D FG +++ M
Sbjct: 132 VEDSKYLLGIMGIPWIQAPCEGEAQAAHMVLKKDADYVASQDYDSFLFGAPKVVRNMAVT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + +++ + L + L+++ I G DY + L +G K A
Sbjct: 192 GKRKLPGKNVYVDVELEVIELEETLRALEINRDQLIDIAICVGTDYNKGLEKVGPKTALK 251
Query: 242 LISKFKSYDKVIKH 255
LI K V++
Sbjct: 252 LIKKHGDIHAVLRE 265
>gi|317374931|sp|A1CJ75.2|FEN1_ASPCL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEEIEKFSRRTVRVTREHNAECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK V YI AP EA+AQ LA + +V A +ED D + F I+ + F + +
Sbjct: 143 KLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAP-ILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ N+ L + ++MCIL GCDYL+ +P +G A LI + S +KV++
Sbjct: 202 EPIQEIHLNRVLEGLDMDRSQFIDMCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AIE 264
>gi|403347702|gb|EJY73284.1| FEN-1 nuclease [Oxytricha trifallax]
Length = 392
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+R+I + H G+K I +FDG +K KR +R + E + +G+
Sbjct: 65 NRNIQFAQH--------GIKAIWVFDGKPPELKSRTLEKRKENRDKAEDEKEEAQEDGDE 116
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ Q+ V ++ S+ + +++K + AP EA+A +L + A ++ED
Sbjct: 117 FKMAKMAQRTVKVTKSMVEDAKRLVKAMGFPVVHAPGEAEAFCAYLVKEGKAFATVSEDM 176
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
D + FG +I M Q + ++ +K L T + +++CI+ GCDY ++
Sbjct: 177 DSLTFGSPFMIRGMSMAKQKAGIELMQIELSKVLFSLKLTYEEFVDLCIICGCDYTATIT 236
Query: 233 GMGLKRAHALISKFKSYDKVIKHL 256
G+G +A+ I+++++ +KV+K +
Sbjct: 237 GIGAVKAYKFITEYRTIEKVLKAI 260
>gi|300120156|emb|CBK19710.2| unnamed protein product [Blastocystis hominis]
Length = 370
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKG--ALSCSRELCKGLPT- 52
MGI+GL L+ + P +KE+E G +A+D +++ A+ + + + T
Sbjct: 1 MGIKGLSKLI-TAYAPKAMKEVESKRYIGRMIAIDASVMIYQSLVAIRMNNQFASVMLTN 59
Query: 53 -----SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSR---KENLARAI 104
+ HI + + L G+KP+ +F+G MK + +R + R +E L A
Sbjct: 60 AEGEVTSHIQGILSKTIKLMEDGIKPVFVFEGKPPEMKQNELERRKQLREKAEEELKDAK 119
Query: 105 ECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQV 164
E E N + ++ V + ++ ++L+ V I A EA++Q LA K+V
Sbjct: 120 EAE---NQEEIEKLSKRTVHMEGGHINDCKELLRLMGVPVIDAASEAESQCAELAKKKKV 176
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQML 216
A+ +ED D + FG +I + K QG +E + + + LS F
Sbjct: 177 WAMASEDMDSLTFGTPVLIRHLTK-SQGAKKDAQSILEVDLAEVLEAMKLSMDEF----- 230
Query: 217 LEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL--KYSTVSVPPF 266
+++CIL GCDY + G+G +A+ I K+++ +KVI++L KY P+
Sbjct: 231 IDLCILCGCDYCDGIRGIGQVKAYQFIQKYRTIEKVIENLTDKYQVPENWPY 282
>gi|441432364|ref|YP_007354406.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
moumouvirus]
gi|440383444|gb|AGC01970.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
moumouvirus]
Length = 431
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 19/272 (6%)
Query: 1 MGIQGLLPLLKSIMIPIHIK-----ELEGCCVAVDTYSWLHKGAL---SCSRELC--KGL 50
MGI+GL L++ I ++ + G V+VD +H+ + S +++ KG
Sbjct: 1 MGIKGLPKLIREITNGYAVRSYNFSKFHGMKVSVDMSLLIHQTVIAMRSNGKDMKNRKGE 60
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
TS H+ ++++ + G+ PI +FDG +K + + R RS+K+ + +E +
Sbjct: 61 LTS-HLYGILYKMLVFLQNGMTPICVFDGKAPDIKNKTVDIR-RSKKDAAEKKLEDLDDS 118
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ------V 164
+ +++ S E +L + YIVAP EAD ++LA + V
Sbjct: 119 EDEEYIKNFKQTFTPSKRDIQEAQILLDLMGIPYIVAPGEADVVCSWLAARRDENGDRYV 178
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
+ V ++DSD++ G + M KF + + +++ NK L+ G T + ++C+L G
Sbjct: 179 KGVCSDDSDMLALGAPYLFKDMLKFMSKNK-EVTIISLNKTLTKTGLTMRQFTDLCVLLG 237
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
CDY ++ G+G K A+ I + S ++VIK +
Sbjct: 238 CDYCDNIKGIGPKTAYNKIKECGSLEEVIKMV 269
>gi|449016220|dbj|BAM79622.1| probable flap structure-specific endonuclease 1 [Cyanidioschyzon
merolae strain 10D]
Length = 380
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLPT-----SRHIDYCMHRVNLLRHYGVKP 73
I+ L G +A+D +++ ++ L + H+ +R L G+KP
Sbjct: 23 IRALFGRVIAIDASMCIYQFLVAVRTADAANLTNESGEITSHLSGVFYRTIKLLELGIKP 82
Query: 74 ILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHEL 133
I +FDG +K + KR R+E+ A + EG+ ++ ++ +S +
Sbjct: 83 IYVFDGKAPDLKANELAKRRSRREEDEQAAAKAREEGDLELYAKYARRVNKVSAETIDNV 142
Query: 134 IQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM-DKFGQG 192
++L+ + + AP EA+AQ L + A +ED D + FG +I + G
Sbjct: 143 KRLLRLMGIPVVEAPSEAEAQCAVLTRAGLAYATASEDMDALTFGTPLLIRNLFAALASG 202
Query: 193 VEF------QCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKF 246
E + S+ +DL G + +++CIL GCDY ++P +G RA L+ +
Sbjct: 203 AERKDRKPSEFSLAITLEDL---GISMDQFIDICILCGCDYTCTIPKIGPYRALMLVKQH 259
Query: 247 KSYDKVIKHLKYSTVSVP 264
++V+ L+ S +P
Sbjct: 260 GCIEEVLASLRESNHPIP 277
>gi|317374947|sp|A8NQC2.3|FEN1_COPC7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 458
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 16/268 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE-----LEGCCVAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL P IKE L G VA+D +++ ++ + + L
Sbjct: 1 MGIKGLTGLLNE-HAPNSIKEHDIKTLFGRKVAIDASMSIYQFLIAVRQRDGEMLTNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 60 ETTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ F ++ V ++ E ++L+ V ++AP EA+AQ LA +V A +E
Sbjct: 120 TAEDVDRFSRRTVKVTKQHNEECQKLLRLMGVPCVIAPSEAEAQCAELARGGKVYAAGSE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM--LLEMCILSGCDYL 228
D D + F I+F+ F + + S + N + + G M +++CIL GCDYL
Sbjct: 180 DMDTLTFNAP-ILFRHLTFSEAKKQPISEI--NLEAALKGLDMDMSQFVDLCILLGCDYL 236
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHL 256
+ + G+G K A LI +F +V++HL
Sbjct: 237 EPIKGVGPKSALKLIREFGGLKEVVEHL 264
>gi|300707184|ref|XP_002995811.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
gi|239605030|gb|EEQ82140.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
Length = 265
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 27 VAVDTYSWLHK---GALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLP 83
VA+D +++++ S L G T+ H+ +R + GV PI +FDG
Sbjct: 31 VAIDISNFIYQFLIAVRSGGNALGYGDTTTSHLVGMFYRTIRIVESGVTPIFVFDGKPPE 90
Query: 84 MKIEQENKRARSR---KENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQ 140
+K+ + KR+ R +E L A+E E + ++ + +S ++ ++LK
Sbjct: 91 LKLYELKKRSDRRDKAEEQLKLAMEAEDKAEIEKQT---KRKIKVSEEHVNDCKRLLKLM 147
Query: 141 NVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSML 200
+ Y+ AP EA+A +L K V+AV TED D +PFG + + F + +
Sbjct: 148 GIPYLTAPSEAEAFCAYLCKVKCVDAVATEDMDALPFGAPVL---LRGFSSAAVKKTHVT 204
Query: 201 QKNKDLSFGGFTKQM--LLEMCILSGCDYLQSLPGMGLKRAHALI 243
+ N G + +++CIL GCDY +S G+G K+ +LI
Sbjct: 205 EYNLQTCLGELDMNLPEFIDLCILLGCDYTESGKGIGPKKGVSLI 249
>gi|325959793|ref|YP_004291259.1| Flap structure-specific endonuclease [Methanobacterium sp. AL-21]
gi|325331225|gb|ADZ10287.1| Flap structure-specific endonuclease [Methanobacterium sp. AL-21]
Length = 328
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 139/312 (44%), Gaps = 31/312 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIK--ELEGCCVAVDTYSWLHKGALSCSRELCKGLP------- 51
MG++ K I+ P +IK +LE VA+D + +++ LS R++ G P
Sbjct: 1 MGVK-----FKDIVTPENIKFQDLESKIVALDAANVIYQ-FLSSIRQV-DGTPLMDENKN 53
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H ++R + L G+KPI IFDG +K + ++KR ++E+ + + EGN
Sbjct: 54 ITSHFSGILYRTSSLIEKGIKPIYIFDGVSDALKKDTQDKRREVKEESQKKWDKALEEGN 113
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ ++ +S I ++L+ V YI A E +AQ +++ + V ++D
Sbjct: 114 LEEARKYAVRSSRMSRDIIEGSKKLLEILGVPYIQALGEGEAQASYMVENGDAWCVGSQD 173
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D I FG +R++ + G + L+K L T++ L+++ IL G D+ + +
Sbjct: 174 YDCILFGATRMVRNLTITGGKANLELITLKKV--LENMEITREQLVDIAILVGTDFNRGV 231
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD------ 285
G+G K LI K VI+ Y P F +H V D
Sbjct: 232 KGVGAKTGLKLIKKHGDIFNVIEKNDYEMDVDPTILRNMF------LEHNVVKDYELKWN 285
Query: 286 -PKTEDIVHLSC 296
P E V C
Sbjct: 286 SPDKEAAVEFLC 297
>gi|82617225|emb|CAI64131.1| DNA repair protein [uncultured archaeon]
gi|268322957|emb|CBH36545.1| flap structure-specific endonuclease [uncultured archaeon]
Length = 330
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 14/255 (5%)
Query: 22 LEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHYGVKPI 74
L G VAVD Y+ L++ LS R+ G P + H+ ++R L G+K +
Sbjct: 19 LAGKIVAVDAYNTLYQ-FLSIIRQ-PDGTPLRDSSGRITSHLSGLIYRTTNLMEAGLKLV 76
Query: 75 LIFDGGLLPMKIEQENKRARS-RKENLARAIECESEGNSSASYEFYQKAVDISPSIAHEL 133
+FDG P +++ + +ARS R+E + E ++++ Q + I +I +
Sbjct: 77 FVFDGK--PSELKADVIKARSERREAAMQKWEEAKVLFPEDAFKYAQASARIDATIVADA 134
Query: 134 IQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGV 193
+L + Y+ AP E +AQ ++ + E V ++D D + FG I + +
Sbjct: 135 KTLLTLMGIPYVQAPSEGEAQAAYMVQNGDAELVSSQDYDSLLFGAPITIRNLSAPRKKA 194
Query: 194 EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVI 253
+ + L+ +D G ++ L+++ IL G D+ + + G+G+KRA LI K S +K+I
Sbjct: 195 KLELVELKALEDTQ--GIIREELIDIAILVGTDFNEGIKGVGVKRALKLIKKHHSIEKII 252
Query: 254 KHLKYSTVSVPPFYE 268
T + YE
Sbjct: 253 SQAAIDTSAGIENYE 267
>gi|294496492|ref|YP_003542985.1| flap endonuclease 1 [Methanohalophilus mahii DSM 5219]
gi|292667491|gb|ADE37340.1| flap endonuclease 1 [Methanohalophilus mahii DSM 5219]
Length = 339
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 17/245 (6%)
Query: 26 CVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHYGVKPILIFD 78
VA+D Y+ L++ LS R+ G P + H+ ++R+ L G+KP+ +FD
Sbjct: 23 TVAIDGYNTLYQ-FLSIIRQR-DGTPLKDSRGNITSHLSGILYRMTNLFEAGIKPVFVFD 80
Query: 79 GGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLK 138
G K + ++R +SR+E L + E + +G S Y++ Q + + I + +Q+L
Sbjct: 81 GKPPDFKADTISQRKKSREEALTKWDEAKEKGLSEDVYKYAQASSKVDALIVEDSMQLLD 140
Query: 139 QQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQG------ 192
+ + AP E +AQ ++ + ++D D + FG R+I + G+
Sbjct: 141 YMGIPCVQAPSEGEAQAAYMVNKGDADYSASQDYDSLLFGAPRVIRNLTITGKRKLPGKN 200
Query: 193 --VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYD 250
++ + + +++ ++ L+ + + G DY + L +G K A LI ++ S
Sbjct: 201 VYIDVEPESIDLMQNIKLLDIDRRQLIGIALCVGTDYNKGLEKVGPKTALKLIKQYGSIH 260
Query: 251 KVIKH 255
K+++H
Sbjct: 261 KILEH 265
>gi|448726443|ref|ZP_21708848.1| flap endonuclease-1 [Halococcus morrhuae DSM 1307]
gi|445795097|gb|EMA45633.1| flap endonuclease-1 [Halococcus morrhuae DSM 1307]
Length = 325
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 110/236 (46%), Gaps = 11/236 (4%)
Query: 16 PIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HY 69
PI EL G VA+D ++WL++ + + + T+ + + V +++ +
Sbjct: 14 PIEFSELAGATVAIDAHNWLYRYLTTTVKWTSDAVYTTAAGEEVANLVGIVQGLPKFFEH 73
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
+ P+++FDGG+ +K ++ +R +++ RA E G++ + + ++ +I
Sbjct: 74 DITPVMVFDGGVTELKADEIEQRREQKEKAAKRAKEAREAGDAVEAARLESRTQRLTTTI 133
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++L +V + AP E +AQ +A + V+ +ED D + FG + +
Sbjct: 134 HETTRELLDLLDVPIVEAPAEGEAQAAHMARTGTVDYAGSEDYDTLLFGAPHTLRDLTSK 193
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISK 245
G + +C L D T + L+++ IL G D+ + G+G K A L+ +
Sbjct: 194 G---DPECMALDATLDEH--DLTWEQLVDVGILCGTDFNDGVSGIGPKTAVKLVGE 244
>gi|119719220|ref|YP_919715.1| flap endonuclease-1 [Thermofilum pendens Hrk 5]
gi|166973708|sp|A1RWY2.1|FEN_THEPD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119524340|gb|ABL77712.1| flap endonuclease 1 [Thermofilum pendens Hrk 5]
Length = 346
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 143/316 (45%), Gaps = 38/316 (12%)
Query: 26 CVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHYGVKPILIFD 78
+A+D Y+ L++ L+ R+ G P + H++ +R G+KP+ +FD
Sbjct: 25 VIAIDAYNSLYQ-FLATIRQ-KDGTPLLDAQGNVTSHLNGLFYRTINYIELGIKPVYVFD 82
Query: 79 GGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLK 138
G +K ++ +R + + E + E G+ + + Q+ ++ ++ H+ +L+
Sbjct: 83 GRPPELKQKELERRYQIKVEAEKKYREAIERGDLEEARIYAQQTSRLTAAMVHDAKLLLR 142
Query: 139 QQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQG------ 192
V Y+ AP E +AQ ++ A ++D D + FG R++ + G+
Sbjct: 143 YMGVPYVEAPSEGEAQAAYMVKKGDAWASGSQDFDSLLFGSPRLVRNLAITGKRKLPRKD 202
Query: 193 --VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL-QSLPGMGLKRAHALISKFKSY 249
VE + +++ + L G T Q L+ + IL G DY + G+G+K+A L+ + K
Sbjct: 203 VYVEVKPEIVELEELLRVHGITHQQLVVIGILVGTDYAPEGARGIGVKKALKLVKELKDP 262
Query: 250 DKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD--------PKTEDIVHL-----SC 296
+K+ + +++S+ VPP K + F H V D P E ++ L
Sbjct: 263 EKIFRSVEWSS-DVPP------EKILELFLHPEVTDSYELTWKEPDKEKVIELLVERHQF 315
Query: 297 ISDNIGNDLDFLAKGI 312
+ + N LD L K +
Sbjct: 316 SMERVTNALDRLEKAV 331
>gi|145514173|ref|XP_001442997.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124467070|sp|A0CXT3.1|FEN11_PARTE RecName: Full=Flap endonuclease 1-1; Short=FEN-1-1; AltName:
Full=Flap structure-specific endonuclease 1-1
gi|124410358|emb|CAK75600.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 18/270 (6%)
Query: 1 MGIQGLLPLLK--------SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELC----K 48
MGI L+ LK ++M+ GC ++ Y +L + + ++ K
Sbjct: 1 MGIHQLMQFLKEKAPNCFRTLMLDYFAGRTIGCDASMAMYQFLIQTQSAGQTQIIELTDK 60
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
+ H+ +R G+KP+ +FDG +K + +R + ++E +
Sbjct: 61 DGNRTGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKEEAQVKTELALE 120
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
+G+ + +Q+ IS + + I++LK I+AP EA+AQ L + ++ A
Sbjct: 121 QGDMQQALLQHQRTTTISSVMKEDAIKMLKLMGCPVIIAPCEAEAQCAELCRAGKIYATA 180
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + F ++ + + + E + K ++++ F +++CIL GCDY
Sbjct: 181 TEDMDALTFRTPVLLRGFNTKKEPIYEIIYDDMMKELEITYEQF-----VDLCILCGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+ + G+G A+ LI +FKS + +++H++
Sbjct: 236 TEKIEGIGPGTAYKLIKEFKSIEGILEHVQ 265
>gi|330689555|pdb|3Q8M|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
gi|330689556|pdb|3Q8M|B Chain B, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
Length = 341
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 19/302 (6%)
Query: 2 GIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCKG 49
GIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 GIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE- 58
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + KR+ R E + + ++
Sbjct: 59 --TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAA 116
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G +F ++ V ++ E +L + Y+ AP EA+A L + +V A T
Sbjct: 117 GAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAAT 176
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED + FG S ++ + + + ++ L G ++ +++CIL G DY +
Sbjct: 177 EDMACLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCE 235
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTE 289
S+ G+G KRA LI K KS +++++ L + VP + +A F V DP++
Sbjct: 236 SIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHK--EAHQLFLEPEVLDPESV 293
Query: 290 DI 291
++
Sbjct: 294 EL 295
>gi|255945091|ref|XP_002563313.1| Pc20g07900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|317374920|sp|B6HEM2.1|FEN1_PENCW RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|211588048|emb|CAP86119.1| Pc20g07900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 395
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRVARKAEATEAHEEAKETGTAEDIEKFSRRTVRVTREHNAECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++L+ + +I AP EA+AQ LA + +V A +ED D + F S I+ + F + +
Sbjct: 143 KLLELMGIPFINAPTEAEAQCAVLARAGKVYAAASEDMDTLCFE-SPILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ ++ L + +++CIL GCDYL+ +P +G A +LI + KS +KV++
Sbjct: 202 EPIQEIHLDRALEGLDMDRAQFIDLCILLGCDYLEPIPKVGATTALSLIKEHKSLEKVLE 261
Query: 255 HLK 257
+K
Sbjct: 262 FMK 264
>gi|170119612|ref|XP_001890929.1| predicted protein [Laccaria bicolor S238N-H82]
gi|317374866|sp|B0E412.1|FEN12_LACBS RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|164633979|gb|EDQ98419.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 469
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE---GCCVAVDTYSWLHKGALSCSRELCKGLP-----T 52
MGI+GL LL S P IKE++ G VA+D +++ ++ ++ + L T
Sbjct: 1 MGIKGLTGLL-SQHAPKAIKEIKTLFGRKVAIDASMSIYQFLIAVRQKDGELLTNDAGET 59
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+R++ +R + G+KP IFDG +K +KR R+E E + G
Sbjct: 60 TRYLMGLFYRTLRIVENGIKPAYIFDGKPPELKKGVLSKRLERREEAKEEGEEAKETGTV 119
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQV-----EAV 167
F ++ V ++ E ++L+ + ++AP EA+AQ LA +V A
Sbjct: 120 EDVDRFSRRTVKVTREHNQECQRLLRLMGIPVVIAPSEAEAQCAELARGGKVYIALYYAA 179
Query: 168 ITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
+ED D + F I+F+ F + + S + + L ++ +++CIL GCDY
Sbjct: 180 GSEDMDTLTFNAP-ILFRHLTFSEAKKQPISEINLKEALEGPLYSFPTFIDLCILLGCDY 238
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
L+ + G+G K A LI ++ V+KHL+
Sbjct: 239 LEPIKGVGPKSALKLIREYGGLKGVVKHLR 268
>gi|317374928|sp|C4YBJ8.2|FEN1_CLAL4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 376
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K +K L G VA+D L++ ++ ++ + L
Sbjct: 1 MGVKGLNQLIKEHAPDAFKEYQLKNLFGRKVAIDASMCLYQYLIAVRQQDGQQLTSEDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R L G+KP+ +FDG +K + KR R++ L + + + G
Sbjct: 61 TTSHLSGMFYRTIRLVESGLKPMYVFDGKPPVLKGGELEKRLLKRQDALKQIEDLKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ ++ V S E ++L+ + YIVAP EA+AQ LA + +V A +ED
Sbjct: 121 VEELMKYEKRTVRASREQNDEAKKLLELMGIPYIVAPSEAEAQCAELARAGKVFAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + + + + + + + L + +++CIL GCDY +++
Sbjct: 181 MDTLCYE-PKYLLRHLTVAEARKMPIDQIDYEAMLKGLDMDRSTFVDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G A LI + S D ++K ++
Sbjct: 240 KGVGPVTAFKLIKEHGSLDNIVKWIQ 265
>gi|320101275|ref|YP_004176867.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
gi|319753627|gb|ADV65385.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
Length = 356
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 21/281 (7%)
Query: 1 MGI--QGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP------- 51
MG+ + L+P I+I ++ L G +A+D Y+ L++ L+ R+ G P
Sbjct: 1 MGVDLRELIPDDAKIIIE-DLRTLRGRVIAIDGYNALYQ-FLAAIRQ-PDGTPLMDGSGR 57
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R + G+KP+ +FDG +K ++ +R R+E + E G+
Sbjct: 58 ITSHLSGLFYRTINIVEAGIKPVYVFDGKPPELKAKEIERRRVVREEAARKYEEAVQAGD 117
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ + + ++ + + +L + ++ AP E +AQ ++A A ++D
Sbjct: 118 LESARRYAMMSARLTDEMVRDAKALLDAMGIPWVQAPAEGEAQAAYMARKGDAYASASQD 177
Query: 172 SDLIPFGCSRII--------FKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
D + FG R++ K+ + + VE + +++ +K LS G T + L+++ IL
Sbjct: 178 YDSLLFGSPRLVRNLTISGRRKLPRREEYVEVKPEVIELDKLLSKLGVTYENLVDIGILL 237
Query: 224 GCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSV 263
G DY G+G K+A L+ + S +K+ K L S V V
Sbjct: 238 GTDYNPDGFEGIGPKKALQLVKVYGSVEKIPKPLLKSPVEV 278
>gi|19115884|ref|NP_594972.1| FEN-1 endonuclease Rad2 [Schizosaccharomyces pombe 972h-]
gi|730469|sp|P39750.1|FEN1_SCHPO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNA
repair protein rad2; AltName: Full=Flap
structure-specific endonuclease 1
gi|2408077|emb|CAB16282.1| FEN-1 endonuclease Rad2 [Schizosaccharomyces pombe]
gi|4456854|emb|CAB36991.1| RAD2 protein [Schizosaccharomyces pombe]
Length = 380
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 12/274 (4%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSCSRELCKGL----- 50
MGI+GL +L S P +K + G VA+D L++ + + + L
Sbjct: 1 MGIKGLAQVL-SEHAPASVKHNDIKNYFGRKVAIDASMSLYQFLIQVRSQDGQQLMNEQG 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP +FDG +K + KR ++ E + G
Sbjct: 60 ETTSHLMGMFYRTLRIVDNGIKPCFVFDGKPPTLKSGELAKRVARHQKAREDQEETKEVG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ F ++ V ++ E ++L+ + ++ AP EA+AQ LA S +V A +E
Sbjct: 120 TAEMVDRFAKRTVKVTRQHNDEAKRLLELMGIPFVNAPCEAEAQCAALARSGKVYAAASE 179
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F ++ + F + + S K L+ + + +++CIL GCDY +
Sbjct: 180 DMDTLCFQAP-VLLRHLTFSEQRKEPISEYNIEKALNGLDMSVEQFVDLCILLGCDYCEP 238
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
+ G+G RA LI ++ + D+ +K S +P
Sbjct: 239 IRGVGPARAVELIRQYGTLDRFVKEADRSKYPIP 272
>gi|363539876|ref|YP_004894560.1| mg509 gene product [Megavirus chiliensis]
gi|350611041|gb|AEQ32485.1| putative endonuclease of the xpg family [Megavirus chiliensis]
Length = 443
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 1 MGIQGLLPLLKSI-----MIPIHIKELEGCCVAVDTYSWLHKGAL---SCSRELC--KGL 50
MGI+GL L+K I M I + +G VAVD +H+ + S R++ KG
Sbjct: 1 MGIKGLPKLIKEITNGSAMKSIQFGKFDGR-VAVDMSLLIHQTVIAMRSNGRDMTNQKGE 59
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
TS H+ ++++ G+ PI +FDG +K + + R RSRK+ + +E +
Sbjct: 60 LTS-HLYGILYKMLTFLQNGMTPICVFDGKAPEIKNKTVDIR-RSRKDAAEKKLESLEDS 117
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAV---------- 160
+ +++ S E +L + YIV+P EAD ++LA
Sbjct: 118 EDEEYIKNFKQTFTPSKKDIQEAQILLDLMGIPYIVSPGEADVVCSWLASRVDPNYIDPE 177
Query: 161 ----SKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSF-------- 208
+ V V ++DSD++ G + M KF + KNKD++
Sbjct: 178 TGKKKRYVTGVCSDDSDMLALGAPYLFKDMLKF----------MTKNKDVTVISLRTTLK 227
Query: 209 -GGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKH 255
G T + ++C+L GCDY ++ G+G K A+ +I + S + VIK+
Sbjct: 228 STGLTMRQFTDLCVLLGCDYCDNIKGIGPKTAYKMIKQLGSLENVIKN 275
>gi|347838761|emb|CCD53333.1| similar to flap endonuclease 1 [Botryotinia fuckeliana]
Length = 395
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 132/284 (46%), Gaps = 23/284 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELC--KG 49
MGI+ L+ ++K P +KE E G VA+D YS+L A+ E+ +
Sbjct: 1 MGIKQLMSIIKD-EAPDAVKEGEIKNQFGRKVAIDASMSIYSFLI--AVRSGGEMLTNED 57
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE 109
T+ H+ +R + G+KP+ +FDG +K + KR + RK +E E
Sbjct: 58 GETTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQ-RKATATEGLEEAKE 116
Query: 110 GNSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
++ E F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAALARAGKVYAAA 176
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
+ED D + F S I+ + F + + + K L+ ++ +++CIL GCDYL
Sbjct: 177 SEDMDTLCFD-SPILLRHLTFSEQRKEPIQEVSLEKVLTGLNMDRKQFVDLCILLGCDYL 235
Query: 229 QSLPGMG------LKRAHALISKFKSYDKVIKHLKYSTVSVPPF 266
+P +G L R H + ++ K +Y+ P+
Sbjct: 236 DPIPKIGPHTALKLIREHGDLETLVAWITADKKERYAIPEDWPY 279
>gi|406865692|gb|EKD18733.1| DNA-repair protein rad2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 460
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KPI +FDG +K + KR + + E + G
Sbjct: 126 TTSHLMGMFYRTLRIVDNGIKPIYVFDGAPPKLKSGELAKRFQRKATATEGLEEAKETGT 185
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +ED
Sbjct: 186 AEDVEKFSRRTVRVTREHNAECQRLLKCMGIPYIIAPTEAEAQCAVLARADKVYAAASED 245
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F ++ + F + + + K L G + +++CIL GCDYL +
Sbjct: 246 MDTLCFDAP-VLLRHLTFSEQRKEPIQEIFLPKVLEGLGMDRAQFVDLCILLGCDYLDPI 304
Query: 232 PGMGLKRAHALISKFKSYDKVI 253
P +G A +I ++ + +K +
Sbjct: 305 PKVGPNAALKIIREYGTIEKFV 326
>gi|384245741|gb|EIE19234.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 384
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 28/289 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCC------------VAVDTYSWLHKGALSCSRELCK 48
MGI+ L LL GCC VAVD +++ + R +
Sbjct: 1 MGIKNLTKLLGD--------HAPGCCKEQKVENYFGRKVAVDASMHIYQFLVVVGRTGDQ 52
Query: 49 GLPT-----SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARA 103
L + + H+ R + G+KP+ +FDG +K E+ ++R R +
Sbjct: 53 TLTSESGDVTSHLQGMFFRTAKMLEVGMKPVYVFDGKPPALKKEELSRRVERRGDATDLL 112
Query: 104 IECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQ 163
E + G + ++ ++ V ++P E ++L+ V + AP EA+AQ +
Sbjct: 113 TEAKETGADADIEKYSKRTVRVTPQHNEECRRLLRLMGVPVVEAPSEAEAQCAQMCKEGL 172
Query: 164 VEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
V + +ED D + F ++I + K Q + +K L T +++CIL
Sbjct: 173 VYGIASEDMDSLTFATPKLIRNLMK-PQTQNVPINEYDYDKVLEGLNLTSDQFVDLCILC 231
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF-YEES 270
GCDY ++ G+G A LI K K + V+ ++ +P PF +EE+
Sbjct: 232 GCDYCGTIKGIGGVTALKLIQKHKRLEDVLASMEGGRYEIPDPFPFEEA 280
>gi|14591211|ref|NP_143287.1| flap endonuclease-1 [Pyrococcus horikoshii OT3]
gi|28380013|sp|O50123.1|FEN_PYRHO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3257838|dbj|BAA30521.1| 343aa long hypothetical 5' nuclease [Pyrococcus horikoshii OT3]
Length = 343
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 25/320 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I ++ L G +A+D + +++ LS R+ KG TS H+ +R L
Sbjct: 14 IDLENLYGKKIAIDALNAIYQ-FLSTIRQRDGTPLMDSKGRITS-HLSGLFYRTINLMEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP +FDG K ++ KR +R+E + E ++GN + ++ Q+A ++ +
Sbjct: 72 GIKPAYVFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKVNEML 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ ++L+ + I AP E +AQ ++A V A ++D D + FG R+I +
Sbjct: 132 IEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G+ VE + ++ ++ L T++ L+E+ IL G DY + G+G K+A
Sbjct: 192 GKRKMPGKDVYVEIKPELVVLDEVLKELKITREKLIELAILVGTDYNPGGVKGIGPKKAL 251
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ S D + K + S V + E V +P E I+ C N
Sbjct: 252 EIVR--YSRDPLAKFQRQSDVDLYAIKEFFLNPPVTNEYSLSWKEPDEEGILKFLCDEHN 309
Query: 301 -----IGNDLDFLAKGIAIG 315
+ N ++ L K I G
Sbjct: 310 FSEERVKNGIERLKKAIKAG 329
>gi|255721403|ref|XP_002545636.1| structure-specific endonuclease RAD27 [Candida tropicalis MYA-3404]
gi|317374882|sp|C5M2X8.1|FEN1_CANTT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|240136125|gb|EER35678.1| structure-specific endonuclease RAD27 [Candida tropicalis MYA-3404]
Length = 374
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 15/282 (5%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MG++GL L+K + +K L G VA+D L++ +S + + L
Sbjct: 1 MGVKGLNKLIKEHSPNAYKEYQLKNLFGRKVAIDASMCLYQFLISVRQSDGQQLTNDDGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + +KP+ +FDG +K + KR R+E + + EG
Sbjct: 61 TTSHLSGIFYRTIKMVENNIKPVYVFDGKPPVLKGGELEKRLLRREEAQKQKDALKDEGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V +S E ++L+ + + AP EA+AQ LA +V A +ED
Sbjct: 121 VEDHLKFEKRLVRVSREQNEEAKKLLELMGIPIVEAPCEAEAQCAELARGGKVYAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + + +++ + F + + + + ++ K+ +++CIL GCDY +++
Sbjct: 181 MDTLCYEPPQLLRHLT-FAEARKIPIDEISYKEAMAGLDMNKEQFVDLCILLGCDYCETI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHL-----KYSTVSVPPFYE 268
G+G A+ LI + S +K+++ + KY+ P+ E
Sbjct: 240 RGVGPVTAYKLIKEHGSLEKIVEWIEKGNTKYTVPENWPYAE 281
>gi|407851500|gb|EKG05394.1| hypothetical protein TCSYLVIO_003532 [Trypanosoma cruzi]
Length = 393
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 21/287 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSC-------SRELCK 48
MGI GL LL P I+E E G +A+D +++ ++ EL
Sbjct: 1 MGILGLSKLLYD-RSPAAIRERELKNYFGRRIAIDASMTIYQFIIAMKGFQDGQGMELTN 59
Query: 49 --GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE- 105
G TS H++ R + G++PI +FDG +K + +R R R E + +
Sbjct: 60 EAGEVTS-HLNGLFARTLRMVDEGLRPIYVFDGKPPTLKASELQER-RQRAEEAQQLFDT 117
Query: 106 CESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE 165
+ EGN + ++ V +S E ++L+ + + AP EA+AQ L +
Sbjct: 118 AKEEGNDELMEKMSKRTVRVSREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAW 177
Query: 166 AVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGC 225
AV TED D + FG ++ + + + + + ++ L G T +++CIL GC
Sbjct: 178 AVATEDMDALTFGAP-VMLRHLTYSEAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGC 236
Query: 226 DYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEES 270
DY+ + G+G ++A I K + +++ L SVP YEE+
Sbjct: 237 DYVPKISGIGPQKAWEGIKKHGDIETLLQSLDAGRHSVPEGFHYEEA 283
>gi|302688649|ref|XP_003034004.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
gi|300107699|gb|EFI99101.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
Length = 452
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 24/273 (8%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPT---- 52
MGI+GL LL M IK L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTGLLSEHAPKSMKEHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLTNDAGE 60
Query: 53 -SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R + G+KP +FDG +K +KR R E E + G
Sbjct: 61 ITSHLMGLFYRTIRIVENGIKPAYVFDGKPPDLKKGVLSKRFEKRDEAKEGEEEAKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ +F ++ V ++ E ++LK + Y+ AP EA+AQ LA +V A +ED
Sbjct: 121 AAEVDKFSRRQVKVTREHNEECRRLLKLMGIPYVEAPSEAEAQCAELARGGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQG-------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
D + F I+F+ + + + ++ + DLS M +++CIL G
Sbjct: 181 MDTLTFNAP-ILFRHLTVSEAKKQPILEINLKAALEGLDMDLS-------MFVDLCILLG 232
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
CDYL+ + G+G K A L+ + V++HL+
Sbjct: 233 CDYLEPIKGVGPKSALKLVREHGGLAGVVEHLR 265
>gi|449676998|ref|XP_002156033.2| PREDICTED: DNA repair protein complementing XP-G cells-like,
partial [Hydra magnipapillata]
Length = 431
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 34 WLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRA 93
WL+K A+ R+ + H+ HR+ L YG+KP+ +FDG + +K +N +
Sbjct: 4 WLNK-AVKGMRDKHGNQVYNAHLVLMFHRICKLLFYGIKPVFVFDGNVPELK---KNTQV 59
Query: 94 RSRKENLAR--------AIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYI 145
++ E+ + IE E E ++A +S + +++ +L+ + Y+
Sbjct: 60 IAKIEDFLKLEVELNKEKIELELETRKQT-----RQAATLSAEVYNDVQDLLQLFGIPYL 114
Query: 146 VAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRI---IFKMDKFGQGVEFQCSMLQK 202
V+P EA+AQ L + K IT+DSD+ FG + IF DK +C
Sbjct: 115 VSPMEAEAQCAALNLLKLTNGTITDDSDIFLFGAENVYKNIFNKDKIP-----EC---YS 166
Query: 203 NKDL-SFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKF 246
+KDL + T++ L+ + L+G DY + LPG+G A ++ F
Sbjct: 167 SKDLETLLYLTREKLIAVAFLTGSDYTEGLPGVGGITAMEILQAF 211
>gi|347522663|ref|YP_004780233.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
gi|343459545|gb|AEM37981.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
Length = 350
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 119/250 (47%), Gaps = 16/250 (6%)
Query: 22 LEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR-----HIDYCMHR-VNLLRHYGVKPIL 75
L G VA+D Y+ L++ + + L SR H+ +R +NL+ H G+K +
Sbjct: 22 LRGKAVAIDAYNALYQFLAAIRQPDGTPLMDSRGRITSHLSGLFYRTINLIEH-GIKVVY 80
Query: 76 IFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQ 135
+FDG +K + +R + + E + E +G+ A+ + Q A ++ + E +
Sbjct: 81 VFDGKPPEIKSIEIERRKKVKSEAAKKYEEAIKKGDLEAARRYAQMASRLTEDMVKEAKR 140
Query: 136 VLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQG--- 192
+L V ++ AP + +AQ ++A V A ++D D + FG R++ + G+
Sbjct: 141 LLDAMGVPWVQAPADGEAQAAYMARKGDVWAAASQDYDALLFGAPRLVRNLTITGRRKLP 200
Query: 193 -----VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAHALISKF 246
VE + +++ +K L G T++ L+ + IL G DY + G+G K A ++
Sbjct: 201 KKDVYVEIKPELIELDKLLKALGITREQLIVIGILVGTDYNPDGVRGIGPKTALRMVKAQ 260
Query: 247 KSYDKVIKHL 256
K+++ L
Sbjct: 261 PDVRKLLRSL 270
>gi|432911452|ref|XP_004078686.1| PREDICTED: probable flap endonuclease 1 homolog [Oryzias latipes]
Length = 343
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
P S + R + +KP+ +FDG K+ KRA E+ G
Sbjct: 47 PLSSPLRGLFFRTLTFLEHDIKPVFVFDGKPPVEKLPLLEKRA-------------EAAG 93
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
S I+ S + ++VLK V + AP +A+ L + AV +E
Sbjct: 94 WSRPLR------TGIASSQTRDCLEVLKHLGVPVVQAPGDAEGLCASLVREGRAHAVASE 147
Query: 171 DSDLIPFGCSRIIFKMD--KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
D D +PFG + +I +++ K + VE+ L + +S + L+++CIL GCDY
Sbjct: 148 DMDTLPFGANVLIRQLNAKKDSEIVEYSLPKLLEALRISL-----EELVDLCILLGCDYC 202
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYE 268
+PG+G KRA ALI K ++ + V+ ++ T VP ++
Sbjct: 203 DKIPGLGPKRALALIQKHRTIENVLLNINRETHPVPHLWK 242
>gi|11497880|ref|NP_069102.1| flap endonuclease-1 [Archaeoglobus fulgidus DSM 4304]
gi|28380012|sp|O29975.1|FEN_ARCFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|42543625|pdb|1RXV|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543626|pdb|1RXV|B Chain B, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543629|pdb|1RXW|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|2650376|gb|AAB90967.1| DNA repair protein RAD2 (rad2) [Archaeoglobus fulgidus DSM 4304]
Length = 336
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 123/262 (46%), Gaps = 21/262 (8%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
+ ++ G +AVD ++ L++ +S R+ G P + H+ ++RV+ +
Sbjct: 14 VELEYFSGKKIAVDAFNTLYQ-FISIIRQ-PDGTPLKDSQGRITSHLSGILYRVSNMVEV 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G++P+ +FDG K + +R + R E I G+ A ++ Q A + I
Sbjct: 72 GIRPVFVFDGEPPEFKKAEIEERKKRRAEAEEMWIAALQAGDKDAK-KYAQAAGRVDEYI 130
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+L + ++ AP E +AQ ++A VE ++D D + FG R+ +
Sbjct: 131 VDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAKGDVEYTGSQDYDSLLFGSPRLARNLAIT 190
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ V+ + ++ +L G T++ L+++ IL G DY + + G+G+K+A
Sbjct: 191 GKRKLPGKNVYVDVKPEIIILESNLKRLGLTREQLIDIAILVGTDYNEGVKGVGVKKA-- 248
Query: 242 LISKFKSYDKVIKHLKYSTVSV 263
++ K+Y + + LK V++
Sbjct: 249 -LNYIKTYGDIFRALKALKVNI 269
>gi|24987745|pdb|1MC8|A Chain A, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
gi|24987746|pdb|1MC8|B Chain B, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
Length = 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 25/320 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
I ++ L G +A+D + +++ LS R+ KG TS H+ +R L
Sbjct: 14 IDLENLYGKKIAIDALNAIYQ-FLSTIRQEDGTPLMDSKGRITS-HLSGLFYRTINLMEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP +FDG K ++ KR +R+E + E ++GN + ++ Q+A ++ +
Sbjct: 72 GIKPAYVFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKVNEML 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ ++L+ + I AP E +AQ ++A V A ++D D + FG R+I +
Sbjct: 132 IEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G+ VE + ++ ++ L T++ L+E+ IL G DY + G+G K+A
Sbjct: 192 GKRKMPGKDVYVEIKPELVVLDEVLKELKITREKLIELAILVGTDYNPGGVKGIGPKKAL 251
Query: 241 ALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHLSCISDN 300
++ S D + K + S V + E V +P E I+ C N
Sbjct: 252 EIVR--YSRDPLAKFQRQSDVDLYAIKEFFLNPPVTNEYSLSWKEPDEEGILKFLCDEHN 309
Query: 301 -----IGNDLDFLAKGIAIG 315
+ N ++ L K I G
Sbjct: 310 FSEERVKNGIERLKKAIKAG 329
>gi|389593155|ref|XP_003721831.1| putative flap endonuclease-1 (FEN-1) [Leishmania major strain
Friedlin]
gi|122048622|sp|Q4FYU7.1|FEN1_LEIMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|321438333|emb|CBZ12085.1| putative flap endonuclease-1 (FEN-1) [Leishmania major strain
Friedlin]
Length = 395
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 29/291 (9%)
Query: 1 MGIQGLLPLL--KSIMIPIHIKELE-----GCCVAVDT----YSWL--HKG-----ALSC 42
MGI GL LL KS P I+E E G +AVD Y ++ KG L
Sbjct: 1 MGILGLSKLLYDKS---PNAIREQELKNFFGRRIAVDASMSIYQFIIAMKGFQDGQGLEL 57
Query: 43 SRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLAR 102
+ E KG TS H++ R + G+KPI +FDG +K ++ R R + R
Sbjct: 58 TNE--KGDVTS-HLNGLFARTLRMIDEGIKPIYVFDGKPPKLKADELEMR-RQKAAEAER 113
Query: 103 AIE-CESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVS 161
A E + G+ + ++ V +S E ++L+ + I AP EA+AQ L
Sbjct: 114 AFEKAKDAGDDEMMEKMSKRTVRVSRDQIDESKKLLRLMGIPVIQAPSEAEAQCAELVKK 173
Query: 162 KQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
+ AV TED D + FG S ++ + + + ++ L G + +++CI
Sbjct: 174 GKAWAVGTEDMDALTFG-STVMLRHLNISDAKKRPIVEIHLDEVLQTTGLSMDQFVDLCI 232
Query: 222 LSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEES 270
L GCDY+ +PG+G ++A I ++ S + ++ L + VP +Y+E+
Sbjct: 233 LLGCDYVPKVPGIGPQKAWEGIQRYGSIESFLESLDTTKHPVPADFYYKEA 283
>gi|425778472|gb|EKV16597.1| Flap endonuclease 1 [Penicillium digitatum PHI26]
gi|425784232|gb|EKV22023.1| Flap endonuclease 1 [Penicillium digitatum Pd1]
Length = 395
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPL 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRVARKAEAAEAHEEAKETGTAEDIEKFSRRTVRVTREHNAECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++L + +I AP EA+AQ LA + +V A +ED D + F S I+ + F + +
Sbjct: 143 KLLGLMGIPFINAPTEAEAQCAVLARAGKVYAAASEDMDTLCFE-SPILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ ++ L + +++CIL GCDYL+ +P +G A +LI + KS +KV++
Sbjct: 202 EPIQEIHLDRALEGLDMDRPQFIDLCILLGCDYLEPIPKVGATTALSLIKEHKSLEKVLE 261
Query: 255 HLK 257
+K
Sbjct: 262 FMK 264
>gi|365759754|gb|EHN01528.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 380
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 155/359 (43%), Gaps = 46/359 (12%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL ++ S + IK G VA+D L++ ++ ++ L
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLANEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG MK + KR+ R+E + E +E
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPEMKSHELTKRSSRREETEKKLAEATTELE 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ V +S E ++L V YI+AP EA+AQ LA +V A +ED
Sbjct: 121 KMKQE---RRLVKVSKEHNEEAQKLLGLMGVPYIIAPTEAEAQCAELAKKGKVYAAASED 177
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + F K E ++ + DL+ F +++CI+ GCDY
Sbjct: 178 MDTLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQF-----VDLCIMLGCDY 232
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-----VPPFYEESFGKAVLTFQHQR 282
+S+ G+G A L+ S +K+I+ ++ S +P + + +A + F
Sbjct: 233 CESIRGVGPVTALKLMRTHGSIEKIIEFIESEESSNTKWKIPEDW--PYKQARMLFLDPE 290
Query: 283 VYD----------PKTEDIVHLSC-----ISDNIGNDLDFLAKGIAI---GDLDPFTQL 323
V D PK +++V C + + + + L KG+ G LD F Q+
Sbjct: 291 VIDGNEIDLKWSPPKEKELVEYLCDEKKFSEERVKSGIARLKKGLKSGIQGRLDGFFQV 349
>gi|374632950|ref|ZP_09705317.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
gi|373524434|gb|EHP69311.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
Length = 301
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 48 KGLPTSRHIDYCMHR-VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIEC 106
KG TS H++ +R VNL+ GV P+ +FDG +K+E+ R R ++E + ++
Sbjct: 4 KGRVTS-HLNGVFYRTVNLIEE-GVIPVYVFDGKPPELKMEELENRRRLKEEAERKLVKA 61
Query: 107 ESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
+ G ++ Q + ++ +A E ++L + V + AP E +A+ +L A
Sbjct: 62 KELGKLEEMRKYSQMSSRLTKGMAEESKELLSRMGVPIVNAPSEGEAEAAYLNYKNITFA 121
Query: 167 VITEDSDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLE 218
++D D + FG R+I + G+ VE + M++ ++ L G T++ L++
Sbjct: 122 AASQDYDSLLFGAKRLIRNLTITGKRKLPNKDVYVEIKPEMIELDELLRKLGLTREQLID 181
Query: 219 MCILSGCDY-LQSLPGMGLKRAHALISKFKSYDKV 252
+ IL G DY + G+G K A+ LI +KS + +
Sbjct: 182 VAILIGTDYNPDGIKGIGPKTAYKLIRTYKSIEAI 216
>gi|154339662|ref|XP_001565788.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|317374905|sp|A4HFE4.1|FEN1_LEIBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134063106|emb|CAM45304.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 395
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 21/283 (7%)
Query: 1 MGIQGLLPLL--KSIMIPIHIKELE-----GCCVAVDTYSWLHKGALSC-------SREL 46
MGI GL LL KS P I+E E G +A+D +++ ++ EL
Sbjct: 1 MGILGLSKLLYDKS---PNAIRERELKSFFGRRIAIDASMSIYQFIIAMKGFQDGQGMEL 57
Query: 47 C--KGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI 104
+G TS H++ R + G+KPI +FDG +K ++ R + E
Sbjct: 58 TNEQGDVTS-HLNGLFARTLRMIDEGIKPIYVFDGKPPKLKADELETRRQKAAEAEREFE 116
Query: 105 ECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQV 164
+ + G+ + ++ V +S E ++L+ V I AP EA+AQ L +
Sbjct: 117 KAKDAGDDEMMEKMSKRTVRVSREQIEESKKLLQLMGVPVIQAPSEAEAQCAELVKKGKA 176
Query: 165 EAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSG 224
AV TED D + FG S ++ + + + + ++ L G + +++CIL G
Sbjct: 177 WAVGTEDMDALTFG-STVMLRHLNISDAKKRPIAEIHLDEVLQATGLSMDQFVDLCILLG 235
Query: 225 CDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
CDY+ +PG+G +RA I ++ + + ++ L + VPP +
Sbjct: 236 CDYVPKVPGIGPQRAWEGIQRYGNIESFLESLDAAKHMVPPDF 278
>gi|126465621|ref|YP_001040730.1| flap endonuclease-1 [Staphylothermus marinus F1]
gi|166973707|sp|A3DMG2.1|FEN_STAMF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126014444|gb|ABN69822.1| flap endonuclease 1 [Staphylothermus marinus F1]
Length = 350
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 20/264 (7%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHR-VNLLRHYG 70
++ L G V +D Y+ L++ L+ R+ G P + H+ +R +N+L + G
Sbjct: 20 LRMLRGKIVVIDGYNALYQ-FLTAIRQ-PDGTPLMDSQGRITSHLSGLFYRTINILEN-G 76
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+KP +FDG +K ++ KR + R++ + E +G+ A+ + + ++ +
Sbjct: 77 IKPAYVFDGKPPEIKAKEIEKRRKIREDASKKYEEALRKGDIEAARRYAMMSAKLTDEMV 136
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+ ++L + +I AP E +AQ ++ A ++D D + FG R+I + G
Sbjct: 137 QDAKKLLDAMGIPWIQAPAEGEAQAAYIVSKGDAWASASQDYDSLLFGSPRLIRNLTISG 196
Query: 191 QG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAHA 241
+ +E + +++ K L G T++ L+ + IL G DY + G+G K+A
Sbjct: 197 KRKLPRKNVYIEIKPEIIELKKLLEKLGLTREQLIYVAILIGTDYNPDGVKGIGPKKALQ 256
Query: 242 LISKFKSYDKVIKHLKYSTVSVPP 265
L+ +K+ DK++K + + + P
Sbjct: 257 LVKAYKTLDKILKIIPKTEFPIEP 280
>gi|322700750|gb|EFY92503.1| DNA-repair protein rad2 [Metarhizium acridum CQMa 102]
Length = 426
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 40/292 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWLHKGALSCSRELCKGLP 51
MGI+ L ++K P IKE E G VA+D YS+L + + +
Sbjct: 1 MGIKQLFQIIKE-EAPEAIKEGEIKNHFGRKVAIDASMSIYSFLIAVRSDGQQLMNESGE 59
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + ++E E + G
Sbjct: 60 TTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + +I+AP EA+AQ LA + +V A +ED
Sbjct: 120 AEDVEKFSRRTVRVTREHNAECQRLLKLMGIPFIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRII---------------FKMDKFGQG-------VEFQCSMLQ--KNKDLS 207
D + F ++ +DK +G V F S ++ D
Sbjct: 180 MDTLCFNTPILLRHLTFSEQRKEPIQEIHLDKVLEGLNMERSQVSFPTSKIEILGYYDGK 239
Query: 208 FGGFTKQMLLE------MCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVI 253
F TK + L+ +CIL GCDYL +P +G A LI + + +KV+
Sbjct: 240 FVRLTKALRLQKTKFVDLCILLGCDYLDPVPKIGPTTALKLIREHGTLEKVV 291
>gi|344258300|gb|EGW14404.1| Flap endonuclease 1 [Cricetulus griseus]
Length = 412
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 51/335 (15%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE-----GCCVAVDT----YSWL---HKGALSCSRELCK 48
MGIQGL L+ + P I+E + G VA+D Y +L +G E +
Sbjct: 1 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 59
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLARAIE 105
T+ H+ +R + G+KP+ +FDG +K + KR+ R E L +A E
Sbjct: 60 ---TTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQE 116
Query: 106 C--------------ESEGNSSASYEFYQ-KAVDISPSI---AHELIQVLKQQN------ 141
+SE + A + Q + + + L++V KQ N
Sbjct: 117 AGVEEEVEKFTKLLLKSERRAEAEKQLQQAQEAGVEEEVEKFTKRLVKVTKQHNDECKHL 176
Query: 142 -----VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQ 196
+ Y+ AP EA+A L + +V A TED D + FG S ++ + + +
Sbjct: 177 LSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFG-SPVLMRHLTASEAKKLP 235
Query: 197 CSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
++ L G ++ +++CIL G DY +S+ G+G KRA LI K KS +++++ L
Sbjct: 236 IQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQKHKSIEEIVRRL 295
Query: 257 KYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDI 291
+ VP + +A F V DP++ ++
Sbjct: 296 DPNKYPVPENWLHK--EAQQLFLEPEVLDPESVEL 328
>gi|16082069|ref|NP_394495.1| flap endonuclease-1 [Thermoplasma acidophilum DSM 1728]
gi|28380022|sp|Q9HJD4.1|FEN_THEAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|10640350|emb|CAC12164.1| DNA repair protein RAD2 related protein [Thermoplasma acidophilum]
Length = 336
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 141/301 (46%), Gaps = 36/301 (11%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHR-VNLLRHYG 70
+K+ ++DTY+ L++ LS R+ G+P + H+ +R +NLL +
Sbjct: 16 LKDQGNQTFSIDTYNILYQ-LLSNVRQ-YDGMPLMDSHGNVTSHLYGIFYRTINLLEN-R 72
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
++P+ +FDG P+K ++R +++ A E G ++Y + I+P I
Sbjct: 73 IRPVYVFDGKPSPLKNRTISERQMMKEKAKAELEEAIERGEEDLR-QYYSRINYITPQIV 131
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+ ++L + Y+ AP E +AQ +++ K V+ VI++D D + FG +I+ +G
Sbjct: 132 DDTKKLLDYMGIPYVDAPSEGEAQASYMT-KKNVDGVISQDYDCLLFGARKILRNFAIYG 190
Query: 191 QGVEFQCSMLQK--------NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHAL 242
+ + ++ + ++ LS + L+ + IL G D+ + + G+G K+A AL
Sbjct: 191 RRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGAKKALAL 250
Query: 243 ISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD-------PKTEDIVHLS 295
I K V+KH+ + E+ + + F++ V D P T+ I H
Sbjct: 251 IKKEGDIKSVLKHIGKNI--------ENLDEIIDFFKNPPVVDYDFKFRKPDTDAIEHFL 302
Query: 296 C 296
C
Sbjct: 303 C 303
>gi|118596590|dbj|BAF37954.1| putative flap endonuclease-1 [Sulfolobus sp. M02]
Length = 304
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 134/270 (49%), Gaps = 19/270 (7%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H++ +R + G+ PI +FDG K ++ +R + ++E + + ++EG+
Sbjct: 7 VTSHLNGLFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGS 66
Query: 112 --SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
+S ++ Q ++ ++ +A E ++LK + + AP E +A+ ++ + A +
Sbjct: 67 IKTSELKKYAQMSIKLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATAS 126
Query: 170 EDSDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
+D D + FG R++ + G+ VE + +++ + L G T++ L+++ I
Sbjct: 127 QDYDSLLFGAKRLVRNLTLTGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGI 186
Query: 222 LSGCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQH 280
+ G DY + G G+K A+ +I K+ S +K I+ + + V EE G F +
Sbjct: 187 IVGTDYNPDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRG----LFLN 242
Query: 281 QRVYDPKTEDIVHLSCISDNIGNDLDFLAK 310
+V +PK E++ +C S+ I LD L K
Sbjct: 243 PQVVEPK-ENLELAACDSNKI---LDILVK 268
>gi|430813459|emb|CCJ29208.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G++P +FDG +K + KR+ R++ +E + +
Sbjct: 61 TTSHLMGIFYRTLRMCDNGIRPCYVFDGTPPKLKSGELAKRSERREKAAKSYLEAKEADS 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+F ++ V ++ E ++LK + Y+ AP EA+AQ LA + +V A +ED
Sbjct: 121 IEDMNKFSRRTVRMTREHNEECKKLLKLMGIPYVDAPCEAEAQCAALAKAGKVYAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D++ F + I+ + F + + + + K L + +++CIL GCDY + +
Sbjct: 181 MDILCFS-TPILLRHLTFSEQKKEPITEVNLEKALKELNMPLEQFVDLCILLGCDYCEPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVI 253
G+G KRA LI ++KS D I
Sbjct: 240 KGIGPKRALELIREYKSLDAFI 261
>gi|351737540|gb|AEQ60575.1| putative endonuclease of the XPG family [Acanthamoeba castellanii
mamavirus]
gi|398257219|gb|EJN40827.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
lentillevirus]
Length = 473
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 45/252 (17%)
Query: 20 KELEGCCVAVD--------TYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGV 71
+ L+G VA+D Y L G +RE G TS H+ + V +
Sbjct: 47 RRLKGITVAIDASLAIYRMVYGKLKSGPSLVNRE---GKLTS-HLRGIFYNVLTFLQNDI 102
Query: 72 KPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAH 131
PI +FDG +K + KR + RK+ F + DI
Sbjct: 103 IPIYVFDGKAPDIKSKTIEKR-KLRKD------------------RFKLTSEDIK----- 138
Query: 132 ELIQVLKQQNVSYIVAPYEADAQMTFLAV------SKQVEAVITEDSDLIPFGCSRIIFK 185
E+ +L + YI+AP EAD ++L + V+ V TEDSD++P G +FK
Sbjct: 139 EVQILLDLMGIPYIIAPGEADVICSWLCARHDSNGKRYVKGVCTEDSDMLPLGAP-YMFK 197
Query: 186 MDKFGQGVEFQCSMLQKNKD-LSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
D G + ++ K KD L F G T +++C+L GCDY ++ G+G K A+ LI
Sbjct: 198 -DMLGLNNLNKNIIIVKLKDVLGFLGLTMNEFIDLCVLLGCDYCDNIKGIGPKNAYKLIV 256
Query: 245 KFKSYDKVIKHL 256
++++ DKV++ L
Sbjct: 257 EYRTLDKVLEFL 268
>gi|448546419|ref|ZP_21626583.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|448548406|ref|ZP_21627673.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
gi|448557600|ref|ZP_21632789.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445702872|gb|ELZ54812.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|445714157|gb|ELZ65924.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445714501|gb|ELZ66263.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
Length = 326
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HYG 70
+ E+ G VAVD ++WL++ + + T+ + + V +++ +
Sbjct: 15 VSFDEVAGSVVAVDAHNWLYRYLTTTVKWTSSEKYTTSEGEEVANLVGIVQGLPKFFEHD 74
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+ P+ +FDGG+ MK ++ KR R++ AR E G+S + + ++ +I
Sbjct: 75 LTPVFVFDGGVTEMKDDEVAKRREQREKAEARLEEAREAGDSVEAARMEARTQRLTETIQ 134
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
++L +V + AP E +AQ +++A + V +ED D + FG + ++ G
Sbjct: 135 DTSRELLSLLDVPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYTLRQLTSKG 194
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISK 245
++ + L G T + L+++ +L G D+ + + G+G K A +++
Sbjct: 195 -----NPELMDLDATLDKHGITHEQLVDIAMLCGTDFNEGITGIGPKTAVKAVTE 244
>gi|219120899|ref|XP_002185681.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582530|gb|ACI65151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 894
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 35/300 (11%)
Query: 58 YCMHRVNLLRHYGVKPILI-FDGGLLPMKIEQENKRARSRKE---NLARAIECESEGNSS 113
Y + R+ L+ IL+ DG P+K + R+ RK+ + R + + +
Sbjct: 505 YVIERLQRLQSMTDAEILVVLDGATPPIKRVEVRDRSNRRKQAAQDRDRPADTDEDALDR 564
Query: 114 ASYEFYQK-AVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
F + A + + ++Q L+ +++ ++V+PYE+D Q+ FL ++ + TEDS
Sbjct: 565 RFKAFRRAGAGEYYTDVVESILQGLRAKSIPFLVSPYESDGQLAFLGDKGYIDLIATEDS 624
Query: 173 DLIPFGC-SRIIFKM------DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGC 225
DL+ +G S I++K+ + +GV + L +++ FT ML + + +G
Sbjct: 625 DLVAYGVKSPILYKLVNSLGDEAVPRGVLVRREDLGATTEINLCDFTATMLAVLFVAAGS 684
Query: 226 DYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD 285
DY + L G+G+K A + I + Y K K V Y E++ K LT +R Y+
Sbjct: 685 DYCKKLKGIGVK-AASYIVRAAFYSKREKGCSPLEVVFRKLYSETWDKQTLTDDFKRDYE 743
Query: 286 ------------PKTEDIVHLSCISDNIGNDLDFLAKGIAIGDLDPFTQLPFQEVSDNSH 333
P D VH C + +G+ L+ GD + P+ E+ +S
Sbjct: 744 KGFLAALLMFRHPVVFDSVHGVCAT--MGDPLE--------GDPQLISYPPYAELCRDSE 793
>gi|412993680|emb|CCO14191.1| predicted protein [Bathycoccus prasinos]
Length = 390
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESE-G 110
+ H+ + R + G+KP+ +FDG +K + KR + +++ + +E E G
Sbjct: 61 VTAHLIGVLSRTCRMLEAGIKPVYVFDGKPPTLKGGELAKR-KDKRDQAEKDLEVARETG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ A + ++ V +S E+++++K V AP EA+A + + V TE
Sbjct: 120 DKDAIEKAAKRTVRVSKEQNQEVMRLVKLLGVPVFEAPCEAEATCAAMCKAGLVHGAATE 179
Query: 171 DSDLIPFGCSRIIFKM----DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + F C R+I + + E+ + K DL + F +++CIL GCD
Sbjct: 180 DMDTLTFACPRLIRNLMAPASQKKDIAEYDFDKVLKGLDLDYDQF-----IDLCILCGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEES 270
Y S+ G+G A LI ++K+ + +++++K VP Y+E+
Sbjct: 235 YTDSIRGIGPVTALQLIREYKNIETILENIKDKKYVVPENFMYKEA 280
>gi|311977771|ref|YP_003986891.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|82000308|sp|Q5UQW7.1|YL386_MIMIV RecName: Full=Putative endonuclease L386
gi|55417005|gb|AAV50655.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|308204373|gb|ADO18174.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|339061318|gb|AEJ34622.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
Length = 473
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 45/252 (17%)
Query: 20 KELEGCCVAVD--------TYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGV 71
+ L+G VA+D Y L G +RE G TS H+ + V +
Sbjct: 47 RRLKGITVAIDASLAIYRMVYGKLKSGPSLVNRE---GKLTS-HLRGIFYNVLTFLQNDI 102
Query: 72 KPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAH 131
PI +FDG +K + KR + RK+ F + DI
Sbjct: 103 IPIYVFDGKAPDIKSKTIEKR-KLRKD------------------RFKLTSEDIK----- 138
Query: 132 ELIQVLKQQNVSYIVAPYEADAQMTFLAV------SKQVEAVITEDSDLIPFGCSRIIFK 185
E+ +L + YI+AP EAD ++L + V+ V TEDSD++P G +FK
Sbjct: 139 EVQILLDLMGIPYIIAPGEADVICSWLCARHDSNGKRYVKGVCTEDSDMLPLGAP-YMFK 197
Query: 186 MDKFGQGVEFQCSMLQKNKD-LSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
D G + ++ K KD L F G T +++C+L GCDY ++ G+G K A+ LI
Sbjct: 198 -DMLGLNNLNKNIIIVKLKDVLGFLGLTMNEFIDLCVLLGCDYCDNIKGIGPKNAYKLIV 256
Query: 245 KFKSYDKVIKHL 256
++++ DKV++ L
Sbjct: 257 EYRTLDKVLEFL 268
>gi|302348204|ref|YP_003815842.1| flap endonuclease-1 [Acidilobus saccharovorans 345-15]
gi|302328616|gb|ADL18811.1| flap endonuclease-1 [Acidilobus saccharovorans 345-15]
Length = 350
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
+ +K L+G +A+D Y+ L++ LS R+ G P + H+ +R L
Sbjct: 17 VDLKALKGYVIALDGYNMLYQ-FLSAIRQ-PDGTPLKDSQGRVTSHLSGLFYRTINLVEE 74
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK ++ +R +KE + + + G+ + ++ Q ++S +
Sbjct: 75 GLKPVYVFDGKPPEMKRKEIEERVARKKEAAEKYAKAKESGSIEEARKYAQATSELSSDM 134
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E ++L + ++ AP + +AQ LA A ++D D + FG R++ +
Sbjct: 135 VSEAKRLLDYMGIPWVQAPADGEAQAAHLAQKGDAWAAGSQDYDSLLFGAPRLVRNLAIT 194
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G+ VE + ++ N L G T++ L+ + IL G D+ + G G K A
Sbjct: 195 GKRKLPNKDEYVEVKPEIIDLNAMLKALGITREQLILLGILVGTDFDPDGIKGYGPKTAL 254
Query: 241 ALISKFKSYDKVIKHLK 257
+ K K ++ +K
Sbjct: 255 NFVKGVKDVTKALESIK 271
>gi|14520948|ref|NP_126423.1| flap endonuclease-1 [Pyrococcus abyssi GE5]
gi|28380024|sp|Q9V0P9.1|FEN_PYRAB RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|5458165|emb|CAB49654.1| fen1 FLAP endonuclease-1 [Pyrococcus abyssi GE5]
gi|380741502|tpe|CCE70136.1| TPA: flap endonuclease-1 [Pyrococcus abyssi GE5]
Length = 343
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 28/326 (8%)
Query: 14 MIP---IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRV 63
+IP I ++ L G +A+D + +++ LS R+ KG TS H+ +R
Sbjct: 8 LIPRKEIELENLYGKKIAIDALNAIYQ-FLSTIRQRDGTPLMDSKGRITS-HLSGLFYRT 65
Query: 64 NLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAV 123
L G+KP+ +FDG K ++ KR +R+E + E ++G+ + ++ Q+A
Sbjct: 66 INLMEAGIKPVYVFDGKPPAFKKKELEKRREAREEAEIKWKEALAKGDIEEARKYAQRAT 125
Query: 124 DISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRII 183
++ + + ++L+ + + AP E +AQ ++A V A ++D D + FG R++
Sbjct: 126 KVNEMLIEDAKKLLQLMGIPIVQAPSEGEAQAAYMAGKGDVYASASQDYDSLLFGTPRLV 185
Query: 184 FKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGM 234
+ G+ VE + ++ + L T++ L+E+ IL G DY + G+
Sbjct: 186 RNLTITGKRKMPGKDIYVEIKPELIVLEEVLKELKITREKLIELAILVGTDYNPGGIKGI 245
Query: 235 GLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDPKTEDIVHL 294
G K+A ++ S D + K + S V + E + +P E I+
Sbjct: 246 GPKKALEIVK--YSKDPLAKFQRQSDVDLYAIKEFFLNPPTTDDYSLKWKEPDEEGIIRF 303
Query: 295 SC-----ISDNIGNDLDFLAKGIAIG 315
C + + N L+ L K I G
Sbjct: 304 LCDEHDFSEERVKNGLERLKKAIKAG 329
>gi|269986761|gb|EEZ93040.1| XPG I domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 332
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 1 MGIQGLLPLLKSIMIPIHIK--ELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR---- 54
MG++ LK + P IK EL G +A+D ++W+ + + L S+
Sbjct: 1 MGVK-----LKELFEPSKIKMGELSGKLIAIDAFNWIFQFLTTIRLADGSYLTDSKGKVT 55
Query: 55 -HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
H++ +R + +KP+ +FDG K E +R ++++E AIE +++
Sbjct: 56 THLNGLFYRSVSMLENRIKPVFVFDGAAPKFKKETLKEREKTKEE----AIEKMQNASTA 111
Query: 114 ASYEFYQKAVD-ISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
Y + + I I ++L + Y+ AP E +AQ L + +V A ++D
Sbjct: 112 EEKAMYMRRLSRIDDYIIDSSKELLSYLGIPYVQAPAEGEAQAAQLNMQGKVFAAASQDY 171
Query: 173 DLIPFGCSRIIFKMDKF------GQGVEFQC--SMLQKNKDLSFGGFTKQMLLEMCILSG 224
D + FG +++ ++ G+G+ ++ N +L+ G T++ L+ + + G
Sbjct: 172 DTLLFGAKKVVRNLNITNKRKISGKGITTSVLPELINANPNLARLGITREQLITLSLFVG 231
Query: 225 CDYLQSLPGMGLKRAHALISK------FKSYD 250
DY + + G+G K+A ++ + F SYD
Sbjct: 232 TDYNKGVDGIGPKKALKIVKEKSREEIFASYD 263
>gi|170096514|ref|XP_001879477.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645845|gb|EDR10092.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 127
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 59/102 (57%)
Query: 34 WLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRA 93
WL+KG +C EL G T +++DY MH + LL+++ ++P +IFDGG LP K E R
Sbjct: 1 WLYKGVFTCPTELATGKNTHKYVDYAMHCMRLLQYHNIQPYIIFDGGPLPAKKNTEPNRK 60
Query: 94 RSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQ 135
R+ENL+ +G + E Y VD++ +A++ I+
Sbjct: 61 WRREENLSHLNALALQGKHREARECYVNCVDVTLQMAYQFIK 102
>gi|146090657|ref|XP_001466297.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|398017392|ref|XP_003861883.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
gi|317374906|sp|A4I2L4.1|FEN1_LEIIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134070659|emb|CAM69008.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|322500111|emb|CBZ35186.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
Length = 395
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 27/290 (9%)
Query: 1 MGIQGLLPLL--KSIMIPIHIKELE-----GCCVAVDT----YSWL--HKG-----ALSC 42
MGI GL LL KS P I+E E G +A+D Y ++ KG L
Sbjct: 1 MGILGLSKLLYDKS---PNAIREQELKNFFGRRIAIDASMSIYQFIIAMKGFQDGQGLEL 57
Query: 43 SRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLAR 102
+ E KG TS H++ R + G+KPI +FDG +K ++ R + E
Sbjct: 58 TNE--KGDVTS-HLNGLFARTLRMIDEGIKPIYVFDGKPPKLKADELEMRRQKAAEAERE 114
Query: 103 AIECESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSK 162
+ + G+ + ++ V +S E ++L+ + I AP EA+AQ L
Sbjct: 115 FEKAKDAGDDEMMEKMSKRTVRVSRDQIDESKKLLRLMGIPVIQAPSEAEAQCAELVKKG 174
Query: 163 QVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCIL 222
+ AV TED D + FG S ++ + + + + ++ L G + +++CIL
Sbjct: 175 KAWAVGTEDMDALTFG-STVMLRHLNISDAKKRPIAEIHLDEVLQITGLSMGQFVDLCIL 233
Query: 223 SGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPP--FYEES 270
GCDY+ +PG+G ++A I ++ S + ++ L + VP +Y+E+
Sbjct: 234 LGCDYVPKVPGIGPQKAWEGIQRYGSIESFLESLDTTKHPVPADFYYKEA 283
>gi|240273940|gb|EER37459.1| DNA repair protein RAD2 [Ajellomyces capsulatus H143]
Length = 519
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 184 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGT 243
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 244 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 303
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 304 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 362
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S ++V++ +K
Sbjct: 363 PKVGPNTALKLIRDHGSLEQVVEAIK 388
>gi|393213357|gb|EJC98853.1| PIN domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 403
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS---IMIPIH-IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL L+ I H IK L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTALISQHAPKAIAEHDIKTLFGRKVAIDASMSIYQFLIAVRQKDGELLTNESGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K KR R+E E + G
Sbjct: 61 TTSHLMGFFYRTIRIVENGIKPAYVFDGKPPDLKSGVLAKRFERREEAKEEGEEAKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++L + +VAP EA+AQ LA +V A +ED
Sbjct: 121 AEDMERFTRRQVKVTKEHNEECRKLLGLMGIPVVVAPSEAEAQCAELARGGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+++ F + + S + K L +++CIL GCDYL+ +
Sbjct: 181 MDTLTFNAP-ILYRHLTFSEAKKQPISEINLQKALEGLEMNMSQFIDLCILLGCDYLEPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A L+ + VI+HL+
Sbjct: 240 KGIGPKSALKLVRDYGDLGAVIEHLR 265
>gi|320590957|gb|EFX03398.1| DNA-repair protein rad2 [Grosmannia clavigera kw1407]
Length = 856
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQ-ENKRARSRKENLARAIECESEG 110
T+ H+ +R + G+KP+ +FDG P K++ E R RK+ +E E
Sbjct: 522 TTSHLMGMFYRTLRMVDNGIKPLYVFDGA--PPKLKSGELARRYMRKQEATEGLEEAKET 579
Query: 111 NSSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
++ E F ++ V ++ E ++LK + +IVAP EA+AQ LA + +V A +
Sbjct: 580 GTAEDIEKFSRRTVRVTREHNTECQRLLKLMGIPFIVAPTEAEAQCAELARAGKVYAAAS 639
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + F + I+ + F + + + +K L ++ +++CIL GCDYL
Sbjct: 640 EDMDTLCFN-TPILLRHLTFSEQRKEPIQEIHLDKLLLGLNMEREQFVDLCILLGCDYLD 698
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLK 257
+P +G A LI + S +KV++ +K
Sbjct: 699 PIPKVGPNTALKLIREHGSLEKVVEFMK 726
>gi|401841744|gb|EJT44085.1| RAD27-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 380
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 155/359 (43%), Gaps = 46/359 (12%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL ++ S + IK G VA+D L++ ++ ++ L
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG MK + KR+ R+E + E +E
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPEMKSHELTKRSSRREETEKKLAEATTELE 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ V +S E ++L V YI+AP EA+AQ LA +V A +ED
Sbjct: 121 KMKQE---RRLVKVSKEHNEEAQKLLGLMGVPYIIAPTEAEAQCAELAKKGKVYAAASED 177
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + F K E ++ + DL+ F +++CI+ GCDY
Sbjct: 178 MDTLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQF-----VDLCIMLGCDY 232
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS-----VPPFYEESFGKAVLTFQHQR 282
+S+ G+G A L+ S +K+I+ ++ S +P + + +A + F
Sbjct: 233 CESIRGVGPVTALKLMRTHGSIEKIIEFIESEESSNTKWKIPDDW--PYKQARMLFLDPE 290
Query: 283 VYD----------PKTEDIVHLSC-----ISDNIGNDLDFLAKGIAI---GDLDPFTQL 323
V D PK ++++ C + + + + L KG+ G LD F Q+
Sbjct: 291 VIDGNEIDLKWSPPKEKELIEYLCNEKKFSEERVKSGIARLKKGLKSGIQGRLDGFFQV 349
>gi|303279240|ref|XP_003058913.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460073|gb|EEH57368.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 360
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 22/299 (7%)
Query: 1 MGIQGLLPLLKSIMIPIHIKE--LEGCC---VAVDTYSWLHKGALSCSRELCKGLP---- 51
MGI+GL LL S P ++E E VA+D +++ + R+ + L
Sbjct: 1 MGIKGLTKLL-SDHAPGCMREQKFESYLDRKVAIDASMHIYQFMMVIGRQGDQTLTNDAG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
+ H+ R + G+KP+ +FDG MK + KR R E A + + G
Sbjct: 60 EVTSHLQGMFMRTCRMLEAGIKPVYVFDGKPPTMKGGELAKRKDKRDEAEAALAKAKEAG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+ + ++ V ++ + E++Q+ + + AP EA+A L + V A +E
Sbjct: 120 DQEEIEKMSKRTVRVTRQQSQEVMQLARLMGLPVFEAPCEAEASCAALCKAGLVYAAASE 179
Query: 171 DSDLIPFGCSRIIFK-MDKFGQG---VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + F C ++ M QG +EF + D+++ F +++CIL GCD
Sbjct: 180 DMDTLCFACPKLARNLMSPASQGKPILEFDYEKILTELDMTWEQF-----IDVCILCGCD 234
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD 285
Y S+ G+G +A +LI K + + +++HL VP + + +A F+H V +
Sbjct: 235 YCDSIKGVGPVKAVSLIKKHGNIETLLQHLDTEKYPVPEDW--PYKEARELFKHPDVVN 291
>gi|73852488|ref|YP_293772.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|72415204|emb|CAI65441.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|347481843|gb|AEO97829.1| flap endonuclease-1 [Emiliania huxleyi virus 84]
gi|347600467|gb|AEP14954.1| endonuclease [Emiliania huxleyi virus 88]
Length = 358
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 47 CKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIEC 106
C+G TS H+ +R L G+KP+ +FDG +K ++ +KR + + L+ E
Sbjct: 57 CEGEVTS-HLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRNERQAQALS---EL 112
Query: 107 ESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
+ +++ + +++V + + E+ ++L + + AP EA+A + + A
Sbjct: 113 KLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQAPCEAEATCAAYVKTGKAYA 172
Query: 167 VITEDSDLIPFGCSRIIFKMDKFGQ----GVEFQCSMLQKNKDLSFGGFTKQMLLEMCIL 222
TED D + FG + +I ++ Q VE+ + L+ G T +E+CIL
Sbjct: 173 TATEDMDSLTFGSTYVIRHINSTDQKKQPTVEYSLPNI-----LNDMGITMDQFIEICIL 227
Query: 223 SGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
SGCDY +++ G+G RA+ LI + + + V+ LK
Sbjct: 228 SGCDYTKTIKGIGPTRAYQLIQEHSTIENVLDVLK 262
>gi|401624921|gb|EJS42958.1| rad27p [Saccharomyces arboricola H-6]
Length = 382
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL ++ S + IK G VA+D L++ ++ ++ L
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG MK + KR+ R+E + E +E
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDMKSHELTKRSSRREETERKLAEATTELE 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ V +S E ++L + YI+AP EA+AQ LA +V A +ED
Sbjct: 121 KMKQE---RRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASED 177
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + F K E ++ + DL+ F +++CI+ GCDY
Sbjct: 178 MDTLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQF-----VDLCIMLGCDY 232
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+S+ G+G A L+ S +K+I++++
Sbjct: 233 CESIRGVGPVTALKLMKTHGSIEKIIEYIE 262
>gi|397569464|gb|EJK46761.1| hypothetical protein THAOC_34559 [Thalassiosira oceanica]
Length = 393
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 16 PIHIKELEGCCVAVDTYSWLHKGALSCSRELC---KGLPTSRHID---YCMHRVNLLRHY 69
P+ +KEL G AVD SW+HK L E+ PT H Y + + L
Sbjct: 130 PLLLKELGGLTFAVDVSSWVHK--LDVVHEVAYARTSTPTYPHKAVQYYFLSKHTALTDL 187
Query: 70 GVKPILIFDGGLLPMKIEQ------ENKRARSRKENLARAIECESEGNSSASYE------ 117
G+K I +FDG MK + E++ AR + LAR ++ + + E
Sbjct: 188 GIKLIYVFDGVSPDMKKNENLRRQGESRSARDEYKVLARRMKDKVSAGEEVTDEEREHLL 247
Query: 118 -FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIP 176
F +K +P L + + + ++ AP+EADAQM LA V ITED DL+
Sbjct: 248 GFRRKMARPTPEDYASLAKWMSDNGMEFVQAPFEADAQMKQLANEGDVSGAITEDGDLVI 307
Query: 177 FGCSRIIFKM---DKFGQGVEFQCSMLQKNKDLSFGGFTK----QMLLEMCILSGCDYLQ 229
+ I+ K K + QC L K KD ++ K + + E+ L GCD++
Sbjct: 308 YEMPCILSKAKIDSKLPEKSSCQCFHLDKLKDGTYNAELKGKRIEYMAELACLLGCDFIG 367
Query: 230 SLPGMG 235
++ +G
Sbjct: 368 NIAKVG 373
>gi|317374948|sp|Q0UZR3.3|FEN1_PHANO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 396
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 15/269 (5%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPT 52
MGI+ L L++ + IK G VA+D YS+L + + + T
Sbjct: 1 MGIKHLYQLIQEHSPDAIKTGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMSETGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R + G+KP+ +FDG +K + KR + + E A A E + G +
Sbjct: 61 TSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAHAAAEEAKETGTA 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+F ++ V ++ E ++LK + +I+AP EA+AQ LA +V A +ED
Sbjct: 121 EDVEKFSRRTVRVTREHNEECRRLLKLMGIPFIIAPTEAEAQCATLARGGKVYAAASEDM 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQ----MLLEMCILSGCDYL 228
D + F I+ + F + + + +L+ + D G + +++CIL GCDYL
Sbjct: 181 DTLTFNTP-ILLRHLTFSE--QRKEPILEIHLDKVLEGLEMEREQPQFIDLCILLGCDYL 237
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+ G+G A LI K+ + V+ H++
Sbjct: 238 DPIKGIGPSTALKLIRDHKTLEGVVAHIQ 266
>gi|15679628|ref|NP_276745.1| flap endonuclease-1 [Methanothermobacter thermautotrophicus str.
Delta H]
gi|28380011|sp|O27670.1|FEN_METTH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|2622760|gb|AAB86106.1| DNA repair protein Rad2 [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 328
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 142/313 (45%), Gaps = 17/313 (5%)
Query: 1 MGIQGLLPLLKSIMIP--IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR---- 54
MG++ L+ ++ P I +++L G VAVD + L++ S + L SR
Sbjct: 1 MGVK-----LRDVVSPRRIRLEDLRGRTVAVDAANTLYQFLSSIRQRDGTPLMDSRGRVT 55
Query: 55 -HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
H+ ++R + ++ I +FDG +K E ++RA RK++ EG+
Sbjct: 56 SHLSGILYRTAAVMEREIRVIYVFDGRSHHLKGETVSRRADIRKKSEVEWKRALEEGDID 115
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
+ ++ ++ +S I ++L+ + Y+ AP E +AQ +++ AV ++D D
Sbjct: 116 RAKKYAVRSSRMSSEILESSKRLLELLGIPYVQAPGEGEAQASYMVKMGDAWAVASQDYD 175
Query: 174 LIPFGCSRIIFKMDKFGQGVEFQCSMLQKN-KDLSFGGFTKQMLLEMCILSGCDYLQSLP 232
+ FG R++ + G+ + + L+ ++LS + L++M +L G D+ + +
Sbjct: 176 CLLFGAPRVVRNLTLSGKLEDPEIIELESTLRELS---ISHTQLVDMALLVGTDFNEGVK 232
Query: 233 GMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQ-RVYDPKTEDI 291
G+G +R LI + KVI+ L+ P F + ++ ++ R P E +
Sbjct: 233 GIGARRGLKLIREKGDIFKVIRDLEADIGGDPQVLRRIFLEPEVSEDYEIRWRKPDVEGV 292
Query: 292 VHLSCISDNIGND 304
+ C D
Sbjct: 293 IEFLCTEHGFSED 305
>gi|3047083|gb|AAC13596.1| similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana]
Length = 362
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 9/216 (4%)
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+RH+ +R L G+KP+ +FDG +K ++ KR R + A GN
Sbjct: 95 NRHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 154
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
++ ++ V ++ + ++L+ V + A EA+AQ L S +V V +ED
Sbjct: 155 EDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDM 214
Query: 173 DLIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
D + FG + + MD + + EF+ + + + L+ F +++CILSGCDY
Sbjct: 215 DSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQF-----IDLCILSGCDYC 269
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
S+ G+G + A LI + S + ++++L +P
Sbjct: 270 DSIRGIGGQTALKLIRQHGSIETILENLNKERYQIP 305
>gi|333986804|ref|YP_004519411.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
gi|333824948|gb|AEG17610.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
Length = 328
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 132/289 (45%), Gaps = 12/289 (4%)
Query: 16 PIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRH 68
P+ +L G VA+D + +++ LS R++ G P + H ++R + L
Sbjct: 13 PLGFNDLNGKIVALDAANVIYQ-FLSSIRQV-DGTPLMDHNKNITSHFSGILYRTSSLIE 70
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
G+KP+ +FDG +K + KR ++++ R EGN+ + ++ ++ +S
Sbjct: 71 KGIKPVYVFDGISSYLKKGTQAKRREVKEKSEKRWKAALDEGNTEEARKYAVRSSRMSSD 130
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+ ++L + +I A E +AQ +++ V ++D D + FG +R++ +
Sbjct: 131 VIEGSKKLLSLMGIPHIQAMGEGEAQASYMVEKGDAWCVGSQDYDCVLFGATRMVKNLTI 190
Query: 189 FGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKS 248
G + +++ K L T++ L+++ IL+G D+ + + G+G K+ L+ +
Sbjct: 191 TGGKANLE--LIELKKVLERLEITREQLIDVAILAGTDFNEGVKGIGAKKGLKLVKEHGD 248
Query: 249 YDKVIKHLKYSTVSVPPFYEESFGK-AVLTFQHQRVYDPKTEDIVHLSC 296
++ H+K P + F K VLT + P ++ C
Sbjct: 249 IFNILDHMKIELEVDPNILRDMFLKHDVLTDYELKWRSPDKSGVIDYLC 297
>gi|325094624|gb|EGC47934.1| DNA repair protein RAD2 [Ajellomyces capsulatus H88]
Length = 359
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 24 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGT 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 84 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 144 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S ++V++ +K
Sbjct: 203 PKVGPNTALKLIRDHGSLEQVVEAIK 228
>gi|169599851|ref|XP_001793348.1| hypothetical protein SNOG_02751 [Phaeosphaeria nodorum SN15]
gi|160705335|gb|EAT89482.2| hypothetical protein SNOG_02751 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + + E A A E + G
Sbjct: 41 TTSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAHAAAEEAKETGT 100
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + +I+AP EA+AQ LA +V A +ED
Sbjct: 101 AEDVEKFSRRTVRVTREHNEECRRLLKLMGIPFIIAPTEAEAQCATLARGGKVYAAASED 160
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQ----MLLEMCILSGCDY 227
D + F I+ + F + + + +L+ + D G + +++CIL GCDY
Sbjct: 161 MDTLTFNTP-ILLRHLTFSE--QRKEPILEIHLDKVLEGLEMEREQPQFIDLCILLGCDY 217
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
L + G+G A LI K+ + V+ H++
Sbjct: 218 LDPIKGIGPSTALKLIRDHKTLEGVVAHIQ 247
>gi|448729889|ref|ZP_21712201.1| flap endonuclease-1 [Halococcus saccharolyticus DSM 5350]
gi|445794210|gb|EMA44763.1| flap endonuclease-1 [Halococcus saccharolyticus DSM 5350]
Length = 325
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 16 PIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HY 69
PI EL G VA+D ++WL++ + + + T+ + + V +++ +
Sbjct: 14 PIAFSELAGATVAIDAHNWLYRYLTTTVKWTSDAVYTTTAGEEVANLVGIVQGLPKFFEH 73
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
V P+ +FDGG+ +K + +R R++ RA+E G++ + + ++ +I
Sbjct: 74 DVTPVFVFDGGVTDLKTNEVERRREQREQAEERAVEAREAGDAIEAARLEARTQRLTDTI 133
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++L +V + AP E +AQ +A S V+ +ED D + FG R + +
Sbjct: 134 HETTRELLGLLDVPVVEAPAEGEAQAAHMARSGTVDYAGSEDYDTLLFGAPRTLRGLTSK 193
Query: 190 G--QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALI 243
G + +EF+ ++ + + T + L+++ IL G D+ + + G+G K A L+
Sbjct: 194 GDPECMEFEATLTEHD-------LTWEQLVDVGILCGTDFNEGVSGVGPKTAVKLV 242
>gi|265141450|gb|ACY74444.1| flap endonuclease [Carukia barnesi]
Length = 236
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 9/235 (3%)
Query: 1 MGIQGLLPLL----KSIMIPIHIKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPT 52
MGI GL LL M IK G +A+D Y +L S+ + T
Sbjct: 1 MGIHGLSKLLADHASGSMKENEIKNYFGRKIAIDASMSIYQFLIAVRSDGSQLTNEEGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R + G+KP+ +FDG MK + KR R+E + + G++
Sbjct: 61 TSHLMGIFYRTIRMVENGIKPLYVFDGKPPEMKSGELTKRTERREEAQKQLEVAQETGDT 120
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+F ++ V ++ +E Q+LK + YI AP EA+AQ L +V A TED
Sbjct: 121 ENIEKFSRRLVKVTQQHNNECKQLLKLMGIPYIEAPCEAEAQCAELVKGGKVFAAATEDM 180
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + FG S ++ + F + + K L G ++ +++CIL GCDY
Sbjct: 181 DCLTFG-SNVMLRHLTFSEARKMPIQEYHLPKVLDGLGLSQDEFIDLCILLGCDY 234
>gi|294867245|ref|XP_002765023.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239864903|gb|EEQ97740.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 407
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRK---ENLARAIECESE 109
+ HI + R + G+KP+ +FDG +K + KR +K E+L AIE +
Sbjct: 65 TSHISGMVTRTLRMMEAGIKPVYVFDGKPPSLKTGELAKRREVKKKAEEDLKEAIE---K 121
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G+ + ++ ++P + ++ ++L I AP EA+A L + +T
Sbjct: 122 GDDEGIRKAAHRSTRVTPQMNADVKKLLTMMGCCIIEAPEEAEATCAALVRYGKCYGAVT 181
Query: 170 EDSDLIPFGCSRIIFKM-DKFGQG------------VEFQCSMLQKNKDLSFGGFTKQML 216
+D D++ FG + + + G G E S + + D+S F
Sbjct: 182 DDMDVLTFGSPVQVKNLFNTLGSGQQGSAGKTTKPVYEMSLSTVLEQLDVSMDQF----- 236
Query: 217 LEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFY 267
++ CI+ GCDYL ++ G+G A LI + KS + V+ H+ + +VP +
Sbjct: 237 IDFCIMCGCDYLDTIRGIGPNNAFKLIVEHKSIEGVLDHIDKTKFAVPESW 287
>gi|225555317|gb|EEH03609.1| DNA-repair protein rad2 [Ajellomyces capsulatus G186AR]
Length = 359
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 24 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGT 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 84 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 144 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S ++V++ +K
Sbjct: 203 PKVGPNTALKLIRDHGSLEQVVEAIK 228
>gi|428169402|gb|EKX38336.1| flap endonuclease 1 [Guillardia theta CCMP2712]
Length = 435
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 55 HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA 114
H+ R + G++P+ +FDG +K + R R E R E EGN
Sbjct: 95 HLQGFFWRTIAMVKAGIRPLYVFDGKPPSLKSGEIASRNLRRDEGAKRLQEATEEGNVEE 154
Query: 115 SYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDL 174
+F ++ ++ A E ++L+ V + AP EA+AQ LA + V A TED D
Sbjct: 155 MNKFAKRTTRVTKQHAEECKRLLRLLGVPTVDAPSEAEAQCAALAKNGLVYASATEDMDA 214
Query: 175 IPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ G S I+ + + + ++ LS G ++ CIL GCD+ +++ G+
Sbjct: 215 LCCG-SPILVRRLTMSEARKLPVLEYHLDQVLSSLGLNMTQFVDFCILCGCDFSETIKGI 273
Query: 235 GLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF 266
G K A I K + + I+ L S VP PF
Sbjct: 274 GPKSALHGIRKHGNIESFIESLNTSKFVVPDPF 306
>gi|317374933|sp|C5GPA7.2|FEN1_AJEDR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317374934|sp|C5JVG7.2|FEN1_AJEDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 19 IKELEGCCVAVDT----YSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPI 74
IK G VA+D YS+L + + + T+ H+ +R + G+KP+
Sbjct: 23 IKNHFGRKVAIDASMSIYSFLVAVRSDGQQLMSETGETTSHLMGMFYRTLRIVENGIKPV 82
Query: 75 LIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELI 134
+FDG +K + KR + E E + G + +F ++ V ++ E
Sbjct: 83 YVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGTAEDVEKFSRRTVRVTREHNEECK 142
Query: 135 QVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVE 194
++LK V YI AP EA+AQ LA + +V A +ED D + F S I+ + F + +
Sbjct: 143 KLLKLMGVPYINAPTEAEAQCAVLARAGKVYAAASEDMDTLCFD-SPILLRHLTFSEQRK 201
Query: 195 FQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
+ ++ L ++ +++CIL GCDYL +P +G A LI S +KV++
Sbjct: 202 EPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPIPKVGPNTALKLIRDHGSLEKVVE 261
Query: 255 HLK 257
++
Sbjct: 262 AIQ 264
>gi|284162570|ref|YP_003401193.1| XPG I domain-containing protein [Archaeoglobus profundus DSM 5631]
gi|284012567|gb|ADB58520.1| XPG I domain protein [Archaeoglobus profundus DSM 5631]
Length = 335
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
+ I+ G +A+D ++ L++ L+ R+ KG TS H+ ++RV+ +
Sbjct: 14 VEIEYFSGKKIAIDAFNTLYQ-FLATIRQPDGTPLMDSKGRITS-HLSGILYRVSNMVEV 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KPI +FDG K ++ +R + R+E I+ ++ + + + ++ Q+AV + I
Sbjct: 72 GIKPIFVFDGEPPEFKKKEIERRRKIREEA---EIKWKTALDIAEARKYAQQAVRVDEYI 128
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++L + + AP E +AQ ++ + ++D D + FG R+ +
Sbjct: 129 IESSKKLLNLMGIPIVQAPSEGEAQAAYIVRKGDADYTGSQDYDSLLFGSPRLARNLAIT 188
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA 241
G+ E + ++ +L G T++ L+++ +L G DY + + G+G+K+A+
Sbjct: 189 GRRKLPGKNVYTEVKPEVIDLEYNLKKLGITREQLIDIALLVGTDYNEGVEGIGVKKAYK 248
Query: 242 LISKFKSYDKVIKHLK 257
+ + KV++ LK
Sbjct: 249 YVKAYGDIFKVLRVLK 264
>gi|261193829|ref|XP_002623320.1| DNA-repair protein rad2 [Ajellomyces dermatitidis SLH14081]
gi|239588925|gb|EEQ71568.1| DNA-repair protein rad2 [Ajellomyces dermatitidis SLH14081]
gi|239613756|gb|EEQ90743.1| DNA-repair protein rad2 [Ajellomyces dermatitidis ER-3]
Length = 406
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 71 TTSHLMGMFYRTLRIVENGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGT 130
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 131 AEDVEKFSRRTVRVTREHNEECKKLLKLMGVPYINAPTEAEAQCAVLARAGKVYAAASED 190
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 191 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 249
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV++ ++
Sbjct: 250 PKVGPNTALKLIRDHGSLEKVVEAIQ 275
>gi|390603405|gb|EIN12797.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 384
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 15/281 (5%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL L+ + IK L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTALINEHAPKAITEHDIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLTNDSGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP IFDG +K KR R+E E + G
Sbjct: 61 TTSHLMGFFYRTIRIVENGIKPAYIFDGKPPELKSGVLAKRFEKREEAKEEGEEAKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++L+ + +VAP EA+AQ LA +V A +ED
Sbjct: 121 AEDMDRFSRRTVKVTREHNEECRKLLRLMGIPVVVAPSEAEAQCAELARGGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + S + K L +++CIL GCDYL+ +
Sbjct: 181 MDTLTFNAP-ILLRHLTFSEAKKTPISEINLAKALEGLQMDMSQFIDLCILLGCDYLEPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK-----YSTVSVPPFY 267
G+G K A LI + V++HL+ V +P ++
Sbjct: 240 KGVGPKTALKLIREHGGLAGVMEHLREKGKGKGGVQIPEYW 280
>gi|317374936|sp|C6HQJ2.2|FEN1_AJECH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 120 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S ++V++ +K
Sbjct: 239 PKVGPNTALKLIRDHGSLEQVVEAIK 264
>gi|154286840|ref|XP_001544215.1| flap endonuclease [Ajellomyces capsulatus NAm1]
gi|317374874|sp|A6QV55.1|FEN1_AJECN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|150407856|gb|EDN03397.1| flap endonuclease [Ajellomyces capsulatus NAm1]
Length = 395
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 60 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGT 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 120 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 180 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 238
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S ++V++ +K
Sbjct: 239 PKVGPNTALKLIRDHGSLEQVVEAIK 264
>gi|327350064|gb|EGE78921.1| DNA-repair protein rad2 [Ajellomyces dermatitidis ATCC 18188]
Length = 402
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 67 TTSHLMGMFYRTLRIVENGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGT 126
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK V YI AP EA+AQ LA + +V A +ED
Sbjct: 127 AEDVEKFSRRTVRVTREHNEECKKLLKLMGVPYINAPTEAEAQCAVLARAGKVYAAASED 186
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 187 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 245
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV++ ++
Sbjct: 246 PKVGPNTALKLIRDHGSLEKVVEAIQ 271
>gi|336365482|gb|EGN93832.1| hypothetical protein SERLA73DRAFT_188945 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378041|gb|EGO19200.1| hypothetical protein SERLADRAFT_479560 [Serpula lacrymans var.
lacrymans S7.9]
Length = 407
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKSIM---IPIH-IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL L+ I H IK L VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTGLIAEYAPKAITEHDIKTLFSRKVAIDASMSIYQFLIAVRQKDGEMLTNDAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG MK +KR R+E E + G
Sbjct: 61 TTSHLMGFFYRTIRIVENGIKPVYVFDGKPPEMKAGVLSKRFEKREEAKEEGEEAKEIGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + +VAP EA+AQ LA +V A +ED
Sbjct: 121 AEDMDKFSRRTVKVTREHNEECRRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + S + + L + ++CIL GCDYL+ +
Sbjct: 181 MDTLTFSAP-ILLRHLTFSEARKAPISEINLQRALEGLEMDMSLFTDLCILLGCDYLEPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A L+ V++HL+
Sbjct: 240 KGVGPKSALKLVRDHGGLAGVVEHLR 265
>gi|77640971|ref|NP_146975.2| flap endonuclease-1 [Aeropyrum pernix K1]
gi|150421551|sp|Q9YFY5.3|FEN_AERPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|116062210|dbj|BAA79026.2| flap structure-specific endonuclease [Aeropyrum pernix K1]
Length = 350
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 18/253 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
+ ++ L G +A+D Y+ L++ L+ R+ G P + H+ +R L
Sbjct: 17 VELRALSGYVLALDAYNMLYQ-FLTAIRQ-PDGTPLLDREGRVTSHLSGLFYRTINLVEE 74
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK + +R R + E AR G + ++ A ++ +
Sbjct: 75 GIKPVYVFDGKPPEMKSREVEERLRRKAEAEARYRRAVEAGEVEEARKYAMMAARLTSDM 134
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E ++L + ++ AP E +AQ ++A A ++D D + FG R++ +
Sbjct: 135 VEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRNLAIT 194
Query: 190 G--------QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G Q VE + +++ LS G T++ L+ + IL G DY + G G K A
Sbjct: 195 GRRKLPGRDQYVEIKPEIIELEPLLSKLGITREQLIAVGILLGTDYNPGGVRGYGPKTAL 254
Query: 241 ALISKFKSYDKVI 253
L+ KV+
Sbjct: 255 RLVKSLGDPMKVL 267
>gi|305662518|ref|YP_003858806.1| flap endonuclease 1 [Ignisphaera aggregans DSM 17230]
gi|304377087|gb|ADM26926.1| flap endonuclease 1 [Ignisphaera aggregans DSM 17230]
Length = 354
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 24/255 (9%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHR-VNLLRHYG 70
+++L G +A D Y+ L++ L+ R+ KG TS H+ +R +N L + G
Sbjct: 20 LRQLSGRIIAFDAYNALYQ-FLAAIRQTDGTPLMDSKGRITS-HLSGLFYRTINFLEN-G 76
Query: 71 VKPILIFDGGLLPMKIE-QENKRARSRKENLARAIE-CESEGNSSASYEFYQKAVDISPS 128
+KPI +FDG P +I+ +E ++ R RKE A+ E SEGN + ++ +A+ ++
Sbjct: 77 IKPIYVFDGK--PPEIKRKELEQRRIRKERAAKMAEKAYSEGNIEEASKYVVQAIFLTDE 134
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+ E ++L + I A E +A+ ++A A ++D D + FG R++ +
Sbjct: 135 MVKEAKELLDAMGIPVIQAAEEGEAEAAYIAKKGLAWATASQDYDSLLFGAPRLVRNLTI 194
Query: 189 FGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA 239
G+ +E + +++ K L G T + L+++ IL G DY + G+G K A
Sbjct: 195 TGKRKLPGKDIYIEIKPEIIELEKLLKTLGITHEQLIDIAILIGTDYNPDGVEGIGPKTA 254
Query: 240 HALISKFKSYDKVIK 254
+ LI + S +K+IK
Sbjct: 255 YQLIKAYGSLEKIIK 269
>gi|110668340|ref|YP_658151.1| flap endonuclease-1 [Haloquadratum walsbyi DSM 16790]
gi|121684788|sp|Q18HK0.1|FEN_HALWD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|109626087|emb|CAJ52538.1| flap endonuclease Fen1 [Haloquadratum walsbyi DSM 16790]
Length = 326
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 18/252 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HYG 70
+ ++ G +AVD ++WL++ + + T+ + + +++ +
Sbjct: 15 VAFDDISGSVIAVDAHNWLYRYLTTTVKFTSDAAYTTESGVEVANLIGVVQGLPKFFEHD 74
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+ P+ +FDGG+ +K E+ +R +R+E + E G+ A+ + ++ +I
Sbjct: 75 LTPVFVFDGGVTELKDEEVQERRVAREEAVELQAAAEERGDELAASRLEARTQRLTETIH 134
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+L + +V I AP E +AQ +A+ V+ V +ED D + FG + ++ G
Sbjct: 135 ETTRGLLNRLDVPIIEAPAEGEAQAAEMAIRGDVDYVGSEDYDTLLFGAPYTVRQLTSKG 194
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA-------LI 243
KN++L T++ L+++ IL G D+ + G+G A + L
Sbjct: 195 DPELMDLQTTLKNQNL-----TREQLVDVAILCGTDFNDGISGIGPATAISAINDHGDLW 249
Query: 244 SKFKSYDKVIKH 255
S + D+ I+H
Sbjct: 250 SVLDARDEFIQH 261
>gi|282165429|ref|YP_003357814.1| flap structure-specific endonuclease [Methanocella paludicola
SANAE]
gi|282157743|dbj|BAI62831.1| flap structure-specific endonuclease [Methanocella paludicola
SANAE]
Length = 339
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 14 MIPIH---IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRV 63
++P H + +L G +A+D ++ L++ LS R++ G P + H+ ++RV
Sbjct: 8 LVPEHETTLVDLNGKVIAIDAFNTLYQ-FLSIIRQM-DGTPLVDDKGEVTSHLSGIIYRV 65
Query: 64 NLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI-ECESEGNSSASYEFYQKA 122
L G+KP+ ++DG P ++ E +AR AR + E S+ +Y++ Q +
Sbjct: 66 TNLVEQGIKPVFVYDGK--PPVLKAETIKARREVREAARQMYEAARAAGSAEAYKYAQAS 123
Query: 123 VDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRI 182
I+ I + ++L + +++AP E +AQ ++ + V ++D D + FG R+
Sbjct: 124 TSINAQIIKDSKELLGYMGMPFLIAPSEGEAQAAYMVQKGAADFVGSQDYDSLLFGAPRM 183
Query: 183 I--------FKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ K+ + G V+ + +++ + L T++ L++M IL G D+ + +
Sbjct: 184 VRNVTITGRRKIPRRGVYVDVKPQIVELKEVLETLEVTREQLIDMGILVGTDFNPGIYKV 243
Query: 235 GLKRAHALISKFKSYDKVIKHL 256
G K A L+ K ++ L
Sbjct: 244 GPKTALKLVKKHPDMRAILDEL 265
>gi|118596594|dbj|BAF37956.1| putative flap endonuclease-1 [Sulfolobus sp. G81]
Length = 304
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 131/270 (48%), Gaps = 19/270 (7%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H++ +R + G+ PI +FDG K ++ +R + ++E + + ++EGN
Sbjct: 7 VTSHLNGLFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKAEGN 66
Query: 112 --SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
+S ++ Q ++ +S +A E ++LK + + AP E +A+ ++ + A +
Sbjct: 67 IKTSELKKYAQMSIKLSNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATAS 126
Query: 170 EDSDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
+D D + FG R++ + G+ VE + +++ + L G T++ L+++ I
Sbjct: 127 QDYDSLLFGAKRLVRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGI 186
Query: 222 LSGCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQH 280
+ G DY + G G+K A+ +I K+ S +K I+ + + V EE F +
Sbjct: 187 IVGTDYNPDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRS----LFLN 242
Query: 281 QRVYDPKTEDIVHLSCISDNIGNDLDFLAK 310
+V +PK E++ C + I LD L K
Sbjct: 243 PQVVEPK-ENLELADCDGNKI---LDILVK 268
>gi|385803787|ref|YP_005840187.1| flap endonuclease Fen1 [Haloquadratum walsbyi C23]
gi|339729279|emb|CCC40515.1| flap endonuclease Fen1 [Haloquadratum walsbyi C23]
Length = 326
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 18/252 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HYG 70
+ ++ G +AVD ++WL++ + + T+ + + +++ +
Sbjct: 15 VAFDDISGSVIAVDAHNWLYRYLTTTVKFTSDAAYTTESGVEVANLIGVVQGLPKFFEHD 74
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+ P+ +FDGG+ +K E+ +R +R+E + E G+ A+ + ++ +I
Sbjct: 75 LTPVFVFDGGVTELKDEEVQERRVAREEAVELQAAAEERGDELAASRLEARTQRLTETIH 134
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+L + +V I AP E +AQ +A+ V+ V +ED D + FG + ++ G
Sbjct: 135 ETTRGLLNRLDVPIIEAPAEGEAQAAEMAIRGDVDYVGSEDYDTLLFGAPYTVRQLTSKG 194
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA-------LI 243
KN++L T++ L+++ IL G D+ + G+G A + L
Sbjct: 195 DPELMDLQTTLKNQNL-----TREQLVDVAILCGTDFNDGISGIGPATAISAINDHGDLW 249
Query: 244 SKFKSYDKVIKH 255
S + D+ I+H
Sbjct: 250 SVLDARDEFIQH 261
>gi|385805407|ref|YP_005841805.1| flap endonuclease-1 [Fervidicoccus fontis Kam940]
gi|383795270|gb|AFH42353.1| flap endonuclease-1 [Fervidicoccus fontis Kam940]
Length = 350
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 130/269 (48%), Gaps = 23/269 (8%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
I ++ L+G +A+D Y+ L++ L+ R+ G P + H+ +R L
Sbjct: 20 IELESLKGRTIAIDAYNALYQ-FLAAIRQ-PDGTPLIDNKGRVTSHLSGIFYRTINLIEA 77
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECE-SEGNSSASYEFYQKAVDISPS 128
G+KPI +FD GL P E+E ++ R KE A+ + +E + ++ Q + ++
Sbjct: 78 GIKPIYVFD-GLPPSLKEKELEKRRKVKEEAAKKYQVAIAEEKYEEARKYAQISTRLNDE 136
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+ E I++L + + AP E +AQ ++A V + ++D D I FG R++ +
Sbjct: 137 MVKEAIKLLDAMGLPTVQAPAEGEAQAAYMAKKGDVWSSGSQDYDSILFGSPRVVRNLTV 196
Query: 189 FGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA 239
G+ ++ + +++ N G ++ L+ + I+ G DY + G+G+K A
Sbjct: 197 SGKRKLPKKDVYIDIKPEVIESNVIYEKLGINREKLIIIGIMLGTDYNPDGIKGVGIKTA 256
Query: 240 HALISKFKSYDKVIKHLKYSTVSVPPFYE 268
++ ++ ++++K L + V +YE
Sbjct: 257 LKIVKSYEKTEEILKSLPQTQVD---YYE 282
>gi|168014475|ref|XP_001759777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374864|sp|A9S0B8.1|FEN11_PHYPA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|162688907|gb|EDQ75281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 394
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 18/266 (6%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R + G+KP+ +FDG +K + KR R++ + + GN
Sbjct: 61 VTSHLQGMFNRTIRVLEAGLKPVYVFDGQPPDLKKRELAKRFARREDAAEDLVTAKETGN 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ +K V ++ + ++L+ V + AP EA+A+ L +++V AV +ED
Sbjct: 121 EADVEKYSKKTVKVTKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKAEKVFAVASED 180
Query: 172 SDLIPFGCSRIIFKM----DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + +G +R + + + +EF + K L G +++CIL GCDY
Sbjct: 181 MDSLTYGSTRFLRHLMEPTSRKLPVLEFDIA-----KVLEGLGLNMDQFVDLCILCGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP-PF-YEES---FGKAVLTFQHQ- 281
++ G+G + A +I + S + V+++L VP P+ Y+E+ F + ++T +
Sbjct: 236 CDTIRGIGPQTALKMIRQHGSLEIVLENLNKDRYQVPDPWPYQEARRLFKEPLVTPPEKV 295
Query: 282 ---RVYDPKTEDIVHLSCISDNIGND 304
+ P TE + L + ND
Sbjct: 296 PEFKWTAPDTEGLRQLLVEENGFNND 321
>gi|315426143|dbj|BAJ47788.1| flap endonuclease 1 [Candidatus Caldiarchaeum subterraneum]
gi|343485003|dbj|BAJ50657.1| flap endonuclease 1 [Candidatus Caldiarchaeum subterraneum]
Length = 344
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 15/250 (6%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSC----SRELC--KGLPTSRHIDYCMHRVNLLRHYGVK 72
+K L G +A D Y+ L++ + R L +G TS +N L+ G+
Sbjct: 19 LKRLSGKAIAFDAYNILYQFLATIRGPDGRPLMDRRGRVTSHLSGLFFRTINFLQE-GLL 77
Query: 73 PILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHE 132
P+ +FDG K KRA +R+E +EG+ A+ + Q+A + +
Sbjct: 78 PVYVFDGRPPEEKYRTIEKRAVAREEAGKLYEAALAEGDLEAARRYAQRAASLEKYMVES 137
Query: 133 LIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG-- 190
+LK V Y++AP E +AQ ++A V A ++D D + FG R++ + G
Sbjct: 138 AADLLKAMGVPYVMAPSEGEAQAAYMAAKGSVYAAGSQDMDSLLFGSPRLVRNLSIVGRR 197
Query: 191 ------QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALIS 244
+ VE ++ +K L+ G T++ L+++ +L G DY + G+G K A ++
Sbjct: 198 KLPGRKEYVEVVPEIIYLDKLLASLGLTREQLIDIGLLVGTDYSPQVRGVGPKTALKIVK 257
Query: 245 KFKSYDKVIK 254
++ S +K ++
Sbjct: 258 EYGSLEKAVE 267
>gi|145514642|ref|XP_001443226.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124447858|sp|A0CYG2.1|FEN12_PARTE RecName: Full=Flap endonuclease 1-2; Short=FEN-1-2; AltName:
Full=Flap structure-specific endonuclease 1-2
gi|124410604|emb|CAK75829.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 18/270 (6%)
Query: 1 MGIQGLLPLLK--------SIMIPIHIKELEGCCVAVDTYSWL---HKGALSCSRELC-K 48
MGI L+ LK ++M+ GC ++ Y +L L+ EL K
Sbjct: 1 MGIHQLMQFLKEKAPNCFRTLMLDYFAGRTIGCDASMAMYQFLIQTQSAGLTQIIELTDK 60
Query: 49 GLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECES 108
+ H+ +R G+KP+ +FDG +K + +R + ++E +
Sbjct: 61 EGNRTGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKEEAKVKTELALE 120
Query: 109 EGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVI 168
+G+ + Q+ IS + + I++L+ I+AP EA+AQ L + ++ A
Sbjct: 121 QGDMQQALLQNQRTTTISSIMKEDAIKMLQLMGCPVIIAPCEAEAQCAELCRAGKIYATA 180
Query: 169 TEDSDLIPFGCSRIIFKMDKFGQGV-EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
TED D + F ++ + + + E + K +L++ F +++CIL GCDY
Sbjct: 181 TEDMDALTFRTPVLLRGFNTKKEPIYEIIYDDMIKELELTYEQF-----VDLCILCGCDY 235
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+ + G+G A+ LI ++KS + +++H++
Sbjct: 236 TEKIEGIGPGTAYKLIKEYKSIEGILEHVQ 265
>gi|156082429|ref|XP_001608699.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis T2Bo]
gi|317374876|sp|A7AX58.1|FEN1_BABBO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154795948|gb|EDO05131.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis]
Length = 672
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 144/322 (44%), Gaps = 35/322 (10%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHK-------GALSCSRELCKG 49
MGI+GL+ L + + ++ L G +A+D + L++ G+ S KG
Sbjct: 1 MGIKGLIGFLSDAAPGCISEVTLESLSGTSIAIDASTALYQFTIAIREGSYLSSLTNSKG 60
Query: 50 LPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKE---NLARAIEC 106
TS HI ++R L G++P+ +FD K + KR R+E +L +AIE
Sbjct: 61 ESTS-HIAGLLNRCIRLLELGIRPVFVFDSTPPEAKSQTLAKRKLLREEAESSLEKAIE- 118
Query: 107 ESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEA 166
E + A ++ + V I+ ++L+ V I A EA+AQ +L V A
Sbjct: 119 --EDDKEAIRKYVGRTVRITQKENESAKKLLRLVGVPVIEAAEEAEAQCAYLCQRGFVTA 176
Query: 167 VITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
V +ED+D + F C ++ + + V + K L T + + CIL GCD
Sbjct: 177 VGSEDADALVFRCGVLLKNLTASNKPV----VRVDLAKALELLELTHEQFTDFCILCGCD 232
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYDP 286
Y +L G+G K A+ LI K S ++++ ++ T+ E + A F+ DP
Sbjct: 233 YCGTLKGVGPKTAYNLIKKHGSISRILE-VRSETL-------EGYEAAQEYFR-----DP 279
Query: 287 KTEDIVHLSCISDNIGNDLDFL 308
K DI + NI +FL
Sbjct: 280 KVRDITTIDRCEANIDGLREFL 301
>gi|118596582|dbj|BAF37950.1| putative flap endonuclease-1 [Sulfolobus sp. Tu A]
gi|118596584|dbj|BAF37951.1| putative flap endonuclease-1 [Sulfolobus sp. Tu B-1]
gi|118596586|dbj|BAF37952.1| putative flap endonuclease-1 [Sulfolobus sp. Sko-3]
gi|118596588|dbj|BAF37953.1| putative flap endonuclease-1 [Sulfolobus sp. Ta]
Length = 304
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H++ +R + G+ PI +FDG K ++ +R + ++E + + ++EG+
Sbjct: 7 VTSHLNGLFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGS 66
Query: 112 --SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
+S ++ Q ++ ++ +A E ++LK + + AP E +A+ ++ + A +
Sbjct: 67 IKTSELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATAS 126
Query: 170 EDSDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
+D D + FG R+I + G+ VE + +++ + L G T++ L+++ I
Sbjct: 127 QDYDSLLFGAKRLIRNLTLTGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGI 186
Query: 222 LSGCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQH 280
+ G DY + G G+K A+ +I K+ S +K I+ + + V EE F
Sbjct: 187 IVGTDYNPDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRS----LFLK 242
Query: 281 QRVYDPKTEDIVHLSCISDNIGNDLDFLAK 310
+V +PK E++ + C S+ I LD L K
Sbjct: 243 PQVVEPK-ENLELVDCDSNKI---LDILVK 268
>gi|242398519|ref|YP_002993943.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM
739]
gi|259645975|sp|C6A1U9.1|FEN_THESM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|242264912|gb|ACS89594.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM
739]
Length = 340
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSREL-------CKGLPTSRHIDYCMHRVNLLRHY 69
+ ++ L G VA+D ++ +++ LS R+ KG TS H+ +R L
Sbjct: 14 LELENLNGRKVAIDAFNAIYQ-FLSTIRQKDGTPLMDSKGRITS-HLSGLFYRTINLMEA 71
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP +FDG K ++ KRA +R+E L + + G + ++ Q+A I+ +
Sbjct: 72 GIKPAYVFDGKPPEFKKKELEKRAETREEALEKWEIALARGELEEAKKYAQRASKINEIL 131
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
+ ++L+ + ++ AP E +AQ ++A V A ++D D + FG +++ +
Sbjct: 132 IEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGDVWASASQDYDSLLFGTPKLVRNLTIT 191
Query: 190 GQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G+ +E + ++ L T++ L+E+ IL G DY + G+G K+A
Sbjct: 192 GKRKLPGKDVYIEVKPELILLEDVLKELKLTREKLIELAILVGTDYNPGGIKGLGPKKAL 251
Query: 241 ALISKFKSYDKVIKHLKYSTVSV 263
++ S D + K+ K S V +
Sbjct: 252 EIVK--YSKDPLSKYQKTSEVDL 272
>gi|357624246|gb|EHJ75100.1| flap endonuclease-1 [Danaus plexippus]
Length = 424
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 149/361 (41%), Gaps = 69/361 (19%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELE------GCCVAVDTYSWLHKGALSCSRELCKGLP--- 51
MGI GL L+ I P+ +KE E G VA+D L++ ++ + +
Sbjct: 1 MGILGLSKLIADIA-PMAVKETEIKIISVGRKVAIDASMSLYQFLIAVRSQGAQLTSVDG 59
Query: 52 -TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEG 110
T+ H+ +R L G+KP+ +FDG MK Q NKRA R+E + G
Sbjct: 60 ETTSHLMGTFYRTIRLIEDGIKPVYVFDGKPPDMKSHQLNKRAERREEAEKELQKATEAG 119
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFL------------ 158
++++ +F ++ V ++ E Q+LK + + AP EA+AQ L
Sbjct: 120 DTASIDKFNRRLVKVTQQHGAEARQLLKLMGIPVVEAPCEAEAQCAELTSEGNLVDGLTN 179
Query: 159 ---------AVSK------------------------QVEAVITEDSDLIPFGCSRIIFK 185
A ++ +V AV TED D + FG + ++ +
Sbjct: 180 PLLRRGPIPAAARARLPVTHTEVISGPPVGGVPVKGGKVYAVATEDMDALTFGAN-VLLR 238
Query: 186 MDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISK 245
F + + ++ L + +++CIL GCDY S+ G+G KRA LI +
Sbjct: 239 HLTFSEARKMPVQEFHLDQVLRGLELEQTEFIDLCILLGCDYCGSIKGIGPKRAIELIKQ 298
Query: 246 FKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY----------DPKTEDIVHLS 295
+S ++V+ ++ S P +E + A FQ V DP E +V
Sbjct: 299 HRSIEQVLHNIDTKKYSPPENWE--YENARRLFQQPEVTEAKDVELKWSDPDEEGLVKFL 356
Query: 296 C 296
C
Sbjct: 357 C 357
>gi|256064183|ref|XP_002570412.1| flap endonuclease-1 [Schistosoma mansoni]
Length = 241
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 142 VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
V ++ AP EA+AQ LA S +V AV TED D + FG + ++ + F + +
Sbjct: 3 VPFVNAPGEAEAQCAVLAKSGKVYAVGTEDMDALAFG-TPVLLRHLTFSEARKMAIQEFN 61
Query: 202 KNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTV 261
L G T +++CIL GCDY+ ++ G+G K+A L+ K++S D V+K++ S
Sbjct: 62 LTSVLEGLGLTMDQFIDLCILLGCDYVDTIRGIGPKKALDLLHKYQSIDCVLKNIDKSKY 121
Query: 262 SVPPFYEESFGKAVLTFQHQRVYDPKT 288
VP + K + F + V DP +
Sbjct: 122 IVPDDWPYEDAKKL--FLNPEVTDPSS 146
>gi|118596592|dbj|BAF37955.1| putative flap endonuclease-1 [Sulfolobus sp. NO82]
Length = 304
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 131/270 (48%), Gaps = 19/270 (7%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H++ +R + G+ PI +FDG K ++ +R + ++E + + ++EGN
Sbjct: 7 VTSHLNGLFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKAEGN 66
Query: 112 --SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
+S ++ Q ++ +S +A E ++LK + + AP E +A+ ++ + A +
Sbjct: 67 IKTSEFKKYAQMSIRLSNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATAS 126
Query: 170 EDSDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
+D D + FG R++ + G+ VE + +++ + L G T++ L+++ I
Sbjct: 127 QDYDSLLFGAKRLVRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGI 186
Query: 222 LSGCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQH 280
+ G DY + G G+K A+ +I K+ S +K I+ + + V EE F +
Sbjct: 187 IVGTDYNPDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRS----LFLN 242
Query: 281 QRVYDPKTEDIVHLSCISDNIGNDLDFLAK 310
+V +PK E++ C + I LD L K
Sbjct: 243 PQVVEPK-ENLELADCDDNKI---LDILVK 268
>gi|226294510|gb|EEH49930.1| DNA-repair protein rad2 [Paracoccidioides brasiliensis Pb18]
Length = 528
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFD 78
+ ++ C ++ YS+L + + + T+ H+ +R + G+KP+ +FD
Sbjct: 160 LTKITPCPSSMSIYSFLVAVRSDGQQLMSETGETTSHLMGMFYRTLRIVDNGIKPVYVFD 219
Query: 79 GGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHELIQVLK 138
G +K + KR + E E + G + +F ++ V ++ E ++LK
Sbjct: 220 GAPPKLKSGELAKRFMRKSEAAEAHEEAKEIGTAEDVEKFSRRTVRVTREHNEECKKLLK 279
Query: 139 QQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCS 198
+ YI AP EA+AQ LA + +V A +ED D + F S I+ + F + +
Sbjct: 280 LMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFD-SPILLRHLTFSEQRKEPIL 338
Query: 199 MLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+ ++ L ++ +++CIL GCDYL +P +G A LI S +KV++ ++
Sbjct: 339 EIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPIPKIGPNTALKLIRDHGSLEKVVEAIE 397
>gi|295663294|ref|XP_002792200.1| DNA-repair protein rad2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279375|gb|EEH34941.1| DNA-repair protein rad2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 381
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 7 LPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLL 66
+PL++S ++ I ++ YS+L + + + T+ H+ +R +
Sbjct: 1 MPLMQSKLVKSKIILAGRWRFSMSIYSFLVAVRSDGQQLMSETGETTSHLMGMFYRTLRI 60
Query: 67 RHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDIS 126
G+KP+ +FDG +K + KR + E E + G + +F ++ V ++
Sbjct: 61 VDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEIGTAEDVEKFSRRTVRVT 120
Query: 127 PSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM 186
E ++LK + YI AP EA+AQ LA + +V A +ED D + F S I+ +
Sbjct: 121 REHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFD-SPILLRH 179
Query: 187 DKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKF 246
F + + + ++ L ++ +++CIL GCDYL +P +G A LI
Sbjct: 180 LTFSEQRKEPILEIHLDRVLEDLDMDRKQFVDLCILLGCDYLDPIPKIGPNTALKLIRDH 239
Query: 247 KSYDKVIKHLK 257
S +KV++ ++
Sbjct: 240 GSLEKVVEAIE 250
>gi|156937484|ref|YP_001435280.1| flap endonuclease-1 [Ignicoccus hospitalis KIN4/I]
gi|166973698|sp|A8AAC1.1|FEN_IGNH4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156566468|gb|ABU81873.1| flap endonuclease 1 [Ignicoccus hospitalis KIN4/I]
Length = 350
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 16/271 (5%)
Query: 1 MGIQGLLPLLKS-IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR----- 54
MG+ L L+ S + +K L VA+D Y+ L++ + E + L S+
Sbjct: 1 MGVTALRELIPSKCKKTLELKSLSNKSVALDAYNTLYQFLAAIRGEDGRPLMDSKGRVTS 60
Query: 55 HIDYCMHR-VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
H+ +R +N+L + G+K +FDG +K + +R + ++E + E G+
Sbjct: 61 HLSGLFYRTINMLEN-GIKVAYVFDGAPPKLKTREIERRQKLKQEAEKKYEEAVRRGDVE 119
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
+ ++ Q + ++ + E ++L+ V ++ AP E +AQ ++A V A ++D D
Sbjct: 120 EARKYAQMSAKLTKEMVEEAKRLLEAMGVPWVQAPSEGEAQAAYMAAKGDVWASASQDYD 179
Query: 174 LIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGC 225
+ FG R++ + G+ VE + + L G T++ L+ + +L G
Sbjct: 180 SLLFGSPRLVRNLAVSGRRKLPNKNVYVEVKPEEITLKCVLEELGITREQLVAIAVLIGT 239
Query: 226 DYLQSLPGMGLKRAHALISKFKSYDKVIKHL 256
DY + G+G K A + + ++V+ L
Sbjct: 240 DYTPGVKGVGPKTALRYVKSYGDLERVLTAL 270
>gi|357601961|gb|EHJ63212.1| flap endonuclease-1 [Danaus plexippus]
Length = 266
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 110 GNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
G++++ +F ++ V ++ E Q+LK + + AP EA+AQ L +V AV T
Sbjct: 6 GDTASIDKFNRRLVKVTQQHGAEARQLLKLMGIPVVEAPCEAEAQCAELVKGGKVYAVAT 65
Query: 170 EDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
ED D + FG + ++ + F + + ++ L + +++CIL GCDY
Sbjct: 66 EDMDALTFGAN-VLLRHLTFSEARKMPVQEFHLDQVLRGLELEQTEFIDLCILLGCDYCG 124
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVY----- 284
S+ G+G KRA LI + +S ++V+ ++ S P +E + A FQ V
Sbjct: 125 SIKGIGPKRAIELIKQHRSIEQVLHNIDTKKYSPPENWE--YENARRLFQQPEVTEAKDV 182
Query: 285 -----DPKTEDIVHLSC 296
DP E +V C
Sbjct: 183 ELKWSDPDEEGLVKFLC 199
>gi|225685184|gb|EEH23468.1| DNA-repair protein rad2 [Paracoccidioides brasiliensis Pb03]
Length = 359
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + E E + G
Sbjct: 24 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEIGT 83
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++LK + YI AP EA+AQ LA + +V A +ED
Sbjct: 84 AEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + + ++ L ++ +++CIL GCDYL +
Sbjct: 144 MDTLCFD-SPILLRHLTFSEQRKEPILEIHLDRVLEGLDMDRKQFVDLCILLGCDYLDPI 202
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
P +G A LI S +KV++ ++
Sbjct: 203 PKIGPNTALKLIRDHGSLEKVVEAIE 228
>gi|299743075|ref|XP_001835524.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
gi|298405488|gb|EAU86309.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
Length = 422
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K +KR R+E E + G
Sbjct: 25 TTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGT 84
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ F ++ V ++ E ++L+ V ++AP EA+AQ LA +V A +ED
Sbjct: 85 AEDVDRFSRRTVKVTKQHNEECQKLLRLMGVPCVIAPSEAEAQCAELARGGKVYAAGSED 144
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM--LLEMCILSGCDYLQ 229
D + F I+F+ F + + S + N + + G M +++CIL GCDYL+
Sbjct: 145 MDTLTFNAP-ILFRHLTFSEAKKQPISEI--NLEAALKGLDMDMSQFVDLCILLGCDYLE 201
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHL 256
+ G+G K A LI +F +V++HL
Sbjct: 202 PIKGVGPKSALKLIREFGGLKEVVEHL 228
>gi|148508143|gb|ABQ75935.1| flap structure-specific endonuclease [uncultured haloarchaeon]
Length = 337
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 18/252 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HYG 70
+ ++ G +AVD ++WL++ + + T+ + + +++ +
Sbjct: 26 VAFDDISGSVIAVDAHNWLYRYLTTTVKFTSDAAYTTESGVEVANLIGVVQGLPKFFEHD 85
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+ P+ +FDGG+ +K E+ +R +R+E + E G+ A+ + ++ +I
Sbjct: 86 LTPVFVFDGGVTELKDEEVQERRVAREEAVELQAAAEERGDELAASRLEARTQRLTETIH 145
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+L + +V I AP E +AQ +A+ V+ V +ED D + FG + ++ G
Sbjct: 146 ETTRGLLNRLDVPIIEAPAEGEAQAAEMAIRGDVDYVGSEDYDTLLFGAPYTVRQLTSKG 205
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHA-------LI 243
KN++L T++ L+++ IL G D+ + G+G A + L
Sbjct: 206 DPELMDLQTTLKNQNL-----TREQLVDVAILCGTDFNDGISGIGPATAISAINDHGDLW 260
Query: 244 SKFKSYDKVIKH 255
S + D+ I+H
Sbjct: 261 SVLDARDEFIQH 272
>gi|327310721|ref|YP_004337618.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
gi|326947200|gb|AEA12306.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
Length = 346
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 127/254 (50%), Gaps = 19/254 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR-----HIDYCMHRVNLLRHYGV 71
+ +++L G VA+D Y+ L++ S + L SR H++ +R L G+
Sbjct: 18 VKLEQLSGRSVALDAYNALYQFLASIRQPDGTPLMDSRGRVTSHLNGLFYRTINLVEAGI 77
Query: 72 KPILIFDGGLLPMK-IEQENKRARSRK--ENLARAIECESEGNSSASYEFYQKAVDISPS 128
+P+ +FDG +K E E++RA K E + RA +EG + ++ ++ + ++
Sbjct: 78 RPVYVFDGKPPELKRAEIESRRAAKEKAREQMERAA---AEGRAEDVAKYAKRVIYVTDQ 134
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKM-- 186
+A + +L + ++ AP E +AQ ++A V ++D D + FG R++ +
Sbjct: 135 MAEDAKALLTAMGIPWVQAPSEGEAQAAYMAARGSVWGAGSQDYDSLLFGAPRLVRNLAV 194
Query: 187 ---DKFGQG-VEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
K G+ VE +++ +K L + +++ L+++ IL G DY +PG+G ++A
Sbjct: 195 SSRRKVGEEYVEVPPEVIELDKVLKALKLKSREQLVDIAILLGTDYNPDGVPGVGPQKAL 254
Query: 241 ALISKFKSYDKVIK 254
+I + S + +K
Sbjct: 255 KIILEQGSLENALK 268
>gi|317376169|sp|B3LQY3.1|FEN1_YEAS1 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190409721|gb|EDV12986.1| structure-specific endonuclease RAD27 [Saccharomyces cerevisiae
RM11-1a]
Length = 382
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 46/359 (12%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL ++ S + IK G VA+D L++ ++ ++ L
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K + KR+ R E + E +E
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDLKSHELTKRSSRRVETEKKLAEATTELE 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ V +S E ++L + YI+AP EA+AQ LA +V A +ED
Sbjct: 121 KMKQE---RRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASED 177
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + F K E ++ + DL+ F +++CI+ GCDY
Sbjct: 178 MDTLCYRTPFLLRHLTFSETKKEPIHEIDTELVLRGLDLTIEQF-----VDLCIMLGCDY 232
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKY-----STVSVPPFYEESFGKAVLTFQHQR 282
+S+ G+G A LI S +K+++ ++ + +P + + +A + F
Sbjct: 233 CESIRGVGPVTALKLIKTHGSIEKIVEFIESGESNNTKWKIPEDW--PYKQARMLFLDPE 290
Query: 283 VYD----------PKTEDIVHLSC-----ISDNIGNDLDFLAKGIAI---GDLDPFTQL 323
V D PK ++++ C + + + + L KG+ G LD F Q+
Sbjct: 291 VIDGNEINLKWSPPKEKELIEYLCDDKKFSEERVKSGISRLKKGLKSGIQGRLDGFFQV 349
>gi|15920393|ref|NP_376062.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 304
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H++ +R + G+ PI +FDG K ++ +R + ++E + + ++EG+
Sbjct: 7 VTSHLNGLFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGS 66
Query: 112 --SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVIT 169
+S ++ Q ++ ++ +A E ++LK + + AP E +A+ ++ + A +
Sbjct: 67 IKTSELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATAS 126
Query: 170 EDSDLIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCI 221
+D D + FG R+I + G+ VE + +++ + L G T++ L+++ I
Sbjct: 127 QDYDSLLFGAKRLIRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGI 186
Query: 222 LSGCDY-LQSLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQH 280
+ G DY + G G+K A+ +I K+ S +K I+ + + V EE F
Sbjct: 187 IVGTDYNPDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRS----LFLK 242
Query: 281 QRVYDPKTEDIVHLSCISDNIGNDLDFLAK 310
+V +PK E++ + C S+ I LD L K
Sbjct: 243 PQVVEPK-ENLELVDCDSNKI---LDILVK 268
>gi|349579452|dbj|GAA24614.1| K7_Rad27p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 382
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 46/359 (12%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL ++ S + IK G VA+D L++ ++ ++ L
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K + KR+ R E + E +E
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDLKSHELTKRSSRRVETEKKLAEATTELE 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ V +S E ++L + YI+AP EA+AQ LA +V A +ED
Sbjct: 121 KMKQE---RRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASED 177
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + F K E ++ + DL+ F +++CI+ GCDY
Sbjct: 178 MDTLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQF-----VDLCIMLGCDY 232
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKY-----STVSVPPFYEESFGKAVLTFQHQR 282
+S+ G+G A LI S +K+++ ++ + +P + + +A + F
Sbjct: 233 CESIRGVGPVTALKLIKTHGSIEKIVEFIESGESNNTKWKIPEDW--PYKQARMLFLDPE 290
Query: 283 VYD----------PKTEDIVHLSC-----ISDNIGNDLDFLAKGIAI---GDLDPFTQL 323
V D PK ++++ C + + + + L KG+ G LD F Q+
Sbjct: 291 VIDGNEINLKWSPPKEKELIEYLCDDKKFSEERVKSGISRLKKGLKSSIQGRLDGFFQV 349
>gi|440491836|gb|ELQ74443.1| 5'-3' exonuclease [Trachipleistophora hominis]
Length = 335
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 13/263 (4%)
Query: 1 MGIQGLLPLLKSIMIPIH--IKELEGCCVAVD----TYSWLHKGALSCSRELCKGLPTSR 54
MGI L ++K P + +A D TY +L S +L ++
Sbjct: 1 MGIHNLTKVIKKYYRPAEHPLSFYRTKKMAFDASLLTYQYLV-AIRSDGAQLAHNSSSTS 59
Query: 55 HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA 114
HI +++ L G+KP+ +FDG +K E+ +R RK+ + E E + +
Sbjct: 60 HISGFFYKIINLAEIGIKPLFVFDGKPPQVKSEEIARRNERRKDAAEKYSEAEEQMDKVK 119
Query: 115 SYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDL 174
++ ++ + I ++ +L V+Y ++ EA+A L V+ V TED D
Sbjct: 120 MEKYDKRKLKIGKEHTDDIKSLLDAMGVAYTISENEAEAFCAALCRKGIVDYVCTEDMDA 179
Query: 175 IPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ F ++ K E++ + ++ L F F +++CIL GCDY ++ G+
Sbjct: 180 LCFRAPVLLKNFVK-DSVAEYRLDEILRDMKLEFDEF-----VDLCILLGCDYAGTIKGI 233
Query: 235 GLKRAHALISKFKSYDKVIKHLK 257
G +A LI K +S + ++K L+
Sbjct: 234 GPMKAETLIRKHRSIENIVKELQ 256
>gi|58266500|ref|XP_570406.1| flap endonuclease [Cryptococcus neoformans var. neoformans JEC21]
gi|134111280|ref|XP_775782.1| hypothetical protein CNBD5110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818103|sp|P0CS61.1|FEN1_CRYNB RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|338818104|sp|P0CS60.1|FEN1_CRYNJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|50258446|gb|EAL21135.1| hypothetical protein CNBD5110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226639|gb|AAW43099.1| flap endonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 453
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MGI+GL LL M +K L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTGLLSENAPKCMKDHEMKTLFGRKVAIDASMSIYQFLIAVRQQDGQMLMNESGD 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R + +G+KP IFDG +K KR R+E E + G
Sbjct: 61 VTSHLMGFFYRTIRMVDHGIKPCYIFDGKPPELKGSVLAKRFARREEAKEGEEEAKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++ E ++L + + AP EA+AQ LA + +V A +ED
Sbjct: 121 AEDVDKLARRQVRVTREHNEECKKLLSLMGIPVVTAPGEAEAQCAELARAGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + + S + + L + +E+CIL GCDYL+
Sbjct: 181 MDTLTFN-SPILLRHLTFSEAKKMPISEIHLDVALRDLEMSMDQFIELCILLGCDYLEPC 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A L+ + + KV++H++
Sbjct: 240 KGIGPKTALKLMREHGTLGKVVEHIR 265
>gi|448592407|ref|ZP_21651514.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
gi|445731412|gb|ELZ82996.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
Length = 326
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HYG 70
+ E+ G VAVD ++WL++ + + T+ + + V +++ +
Sbjct: 15 VSFDEVAGSVVAVDAHNWLYRYLTTTVKWTNSEKYTTSEGEEVANLVGIVQGLPKFFEHD 74
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
+ P+ +FDGG+ MK ++ KR R++ AR E G++ + + ++ +I
Sbjct: 75 LTPVFVFDGGVTEMKDDEVAKRREQREKAEARLEEAREAGDAVEAARMEARTQRLTDTIQ 134
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
++L+ +V + AP E +AQ +++A + V +ED D + FG + ++ G
Sbjct: 135 ETSRELLRLLDVPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYTLRQLTSKG 194
Query: 191 QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYD 250
++ + L T + L+++ +L G D+ + + G+G K A + + K +
Sbjct: 195 -----NPELMDLDATLDKHDITWEQLVDIAMLCGTDFNEGISGVGPKTA---VKEVKKHG 246
Query: 251 KVIKHLKYSTVSVP 264
+ L+ S+P
Sbjct: 247 DLWAVLEARGDSIP 260
>gi|6322736|ref|NP_012809.1| Rad27p [Saccharomyces cerevisiae S288c]
gi|140964|sp|P26793.1|FEN1_YEAST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1; AltName: Full=RAD2
homolog nuclease 1; Short=RTH1 nuclease; AltName:
Full=Structure-specific endonuclease RAD27
gi|317376170|sp|C7GVJ8.1|FEN1_YEAS2 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376171|sp|A6ZZK4.1|FEN1_YEAS7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376172|sp|C8ZC62.1|FEN1_YEAS8 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|248392|gb|AAB21998.1| RAD2 homolog [Saccharomyces cerevisiae]
gi|486190|emb|CAA81953.1| RAD27 [Saccharomyces cerevisiae]
gi|151941690|gb|EDN60052.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|256269907|gb|EEU05165.1| Rad27p [Saccharomyces cerevisiae JAY291]
gi|259147728|emb|CAY80978.1| Rad27p [Saccharomyces cerevisiae EC1118]
gi|285813148|tpg|DAA09045.1| TPA: Rad27p [Saccharomyces cerevisiae S288c]
gi|323347750|gb|EGA82014.1| Rad27p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764563|gb|EHN06085.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298324|gb|EIW09422.1| Rad27p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 382
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 46/359 (12%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP----- 51
MGI+GL ++ S + IK G VA+D L++ ++ ++ L
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K + KR+ R E + E +E
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDLKSHELTKRSSRRVETEKKLAEATTELE 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
++ V +S E ++L + YI+AP EA+AQ LA +V A +ED
Sbjct: 121 KMKQE---RRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASED 177
Query: 172 SDLI----PFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
D + PF + F K E ++ + DL+ F +++CI+ GCDY
Sbjct: 178 MDTLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQF-----VDLCIMLGCDY 232
Query: 228 LQSLPGMGLKRAHALISKFKSYDKVIKHLKY-----STVSVPPFYEESFGKAVLTFQHQR 282
+S+ G+G A LI S +K+++ ++ + +P + + +A + F
Sbjct: 233 CESIRGVGPVTALKLIKTHGSIEKIVEFIESGESNNTKWKIPEDW--PYKQARMLFLDPE 290
Query: 283 VYD----------PKTEDIVHLSC-----ISDNIGNDLDFLAKGIAI---GDLDPFTQL 323
V D PK ++++ C + + + + L KG+ G LD F Q+
Sbjct: 291 VIDGNEINLKWSPPKEKELIEYLCDDKKFSEERVKSGISRLKKGLKSGIQGRLDGFFQV 349
>gi|154292277|ref|XP_001546714.1| hypothetical protein BC1G_14593 [Botryotinia fuckeliana B05.10]
Length = 302
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 3/206 (1%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP+ +FDG +K + KR + RK +E E
Sbjct: 72 TTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQ-RKATATEGLEEAKETG 130
Query: 112 SSASYE-FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
++ E F ++ V ++ E ++LK + YI+AP EA+AQ LA + +V A +E
Sbjct: 131 TAEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAALARAGKVYAAASE 190
Query: 171 DSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQS 230
D D + F S I+ + F + + + K L+ ++ +++CIL GCDYL
Sbjct: 191 DMDTLCFD-SPILLRHLTFSEQRKEPIQEVSLEKVLTGLNMDRKQFVDLCILLGCDYLDP 249
Query: 231 LPGMGLKRAHALISKFKSYDKVIKHL 256
+P +G A LI + + ++ +
Sbjct: 250 IPKIGPHTALKLIREHGDLETLVAWI 275
>gi|347482295|gb|AEO98236.1| flap endonuclease-1 [Emiliania huxleyi virus 203]
gi|347601360|gb|AEP15846.1| flap structure-specific endonuclease 1 [Emiliania huxleyi virus
207]
gi|357972633|gb|AET97906.1| flap endonuclease-1 [Emiliania huxleyi virus 201]
Length = 358
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNS 112
+ H+ +R L G+KP+ +FDG +K ++ +KR + + L+ E + ++
Sbjct: 62 TSHLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRNERQAQALS---ELKLTDDA 118
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
+ + +++V + + E+ ++L + I AP EA+A + + A TED
Sbjct: 119 TEVEKQEKRSVRATREHSEEVKKMLTLMGIPVIQAPCEAEATCAAYVKTGKAYATATEDM 178
Query: 173 DLIPFGCSRIIFKMDKFGQ----GVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL 228
D + FG + +I ++ Q VE+ + L+ G T +E+CILSGCDY
Sbjct: 179 DSLTFGSTYVIRHINSTDQKKQPTVEYSLPNI-----LNDMGITMDQFIEICILSGCDYT 233
Query: 229 QSLPGMGLKRAHALISKFKSYDKVIKHLK 257
+++ G+G RA+ LI + + + V+ LK
Sbjct: 234 KTIKGIGPTRAYQLIQEHSTIENVLGVLK 262
>gi|429965038|gb|ELA47035.1| hypothetical protein VCUG_01480 [Vavraia culicis 'floridensis']
Length = 335
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 13/262 (4%)
Query: 1 MGIQGLLPLLKSIMIPIH--IKELEGCCVAVD----TYSWLHKGALSCSRELCKGLPTSR 54
MGI L ++K PI + +A D TY +L S +L ++
Sbjct: 1 MGIHNLTKIIKKYYRPIEHPLSFYRTKKMAFDASLLTYQYLI-AIRSDGAQLAYNSTSTS 59
Query: 55 HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA 114
HI +++ L G+KP+ +FDG +K E+ +R RK + E E + +
Sbjct: 60 HISGFFYKIINLAEIGIKPLFVFDGKPPQVKSEEIARRNERRKNAAEKYSEAEEQMDKVE 119
Query: 115 SYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDL 174
++ ++ + I E+ +L V+Y ++ EA+A L V+ V TED D
Sbjct: 120 MEKYDKRKLKIGKEHTDEIKLLLDAMGVTYTISENEAEAFCATLCRKGIVDYVCTEDMDA 179
Query: 175 IPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGM 234
+ F ++ K E++ + ++ L F F +++CIL GCDY ++ G+
Sbjct: 180 LCFRAPVLLKNFVK-DTVAEYRLDEILRDMKLEFSAF-----MDLCILLGCDYAGTIKGI 233
Query: 235 GLKRAHALISKFKSYDKVIKHL 256
G +A LI + + + ++K L
Sbjct: 234 GPMKAETLIRRHGNIENIVKEL 255
>gi|429962587|gb|ELA42131.1| hypothetical protein VICG_00772 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 15/211 (7%)
Query: 51 PTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMK---IEQENKRARSRKENLARAIECE 107
T+ H+ +R + G+ P+ +FDG P+K +++ N+R R + E + + E
Sbjct: 58 ATTSHLVGMFYRTIRIIESGIIPVYVFDGKAPPIKAIELQKRNER-RLKAEKMLEQAKLE 116
Query: 108 SEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAV 167
+ +E ++ V + S + ++ + V ++ A E++A + L V+AV
Sbjct: 117 EDKKEMDKHE--KRKVKVEESHVDDCKRLFRLMGVPFVTAESESEAYCSLLCKRGVVKAV 174
Query: 168 ITEDSDLIPFGCSRIIFKMD----KFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILS 223
TED D + FG ++ M+ K E+ + K +L+ G F +++CIL
Sbjct: 175 ATEDMDALCFGAPILLRNMNASQSKNLDIDEYNLGTILKELELTMGSF-----IDLCILM 229
Query: 224 GCDYLQSLPGMGLKRAHALISKFKSYDKVIK 254
GCDY ++ G+G KRA+ LI K+ + +I+
Sbjct: 230 GCDYCDTIKGVGHKRAYDLIKKYGCIESIIE 260
>gi|392591810|gb|EIW81137.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 437
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-----TSRHIDYCMHRVNLLRHYGVKP 73
IK L G VA+D +++ ++ ++ + L T+ H+ +R + G+KP
Sbjct: 54 IKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLTNDAGETTSHLMGFFYRTIRIVENGIKP 113
Query: 74 ILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIAHEL 133
+FDG +K +KR R+E E + G + F ++ V ++ E
Sbjct: 114 AYVFDGKPPDLKSGVLSKRFEKREEAKEEGEEAKETGTAEDVDRFSRRTVRVTKEHNEEC 173
Query: 134 IQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGV 193
++L+ + IVAP EA+AQ LA +V A +ED D + F ++ + F +
Sbjct: 174 RRLLRLMGIPVIVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFHAP-VLLRHLTFSEAK 232
Query: 194 EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALISKFKSYDKVI 253
+ S + + L +++CIL GCDYL+ + G+G K A LI ++ V+
Sbjct: 233 KAPISEIHLERALQGLEMDMSQFIDLCILLGCDYLEPIKGVGPKSALKLIREYGGLKGVV 292
Query: 254 KHLK 257
+HL+
Sbjct: 293 EHLR 296
>gi|213404252|ref|XP_002172898.1| DNA-repair protein rad2 [Schizosaccharomyces japonicus yFS275]
gi|317376192|sp|B6JYI7.1|FEN1_SCHJY RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|212000945|gb|EEB06605.1| DNA-repair protein rad2 [Schizosaccharomyces japonicus yFS275]
Length = 377
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 10/273 (3%)
Query: 1 MGIQGLLPLLK----SIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MGI+GL ++ S + IK G VA+D L++ + + + L
Sbjct: 1 MGIKGLSQVIADNCPSAVRHNDIKNYFGRKVAIDASMSLYQFLIQVRGQDGQQLMNDQGE 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K + KRA +++ E + G
Sbjct: 61 TTSHLMGMFYRTLRMVDNGLKPCYVFDGKPPTLKSGELAKRASRQQKAREEREEAKEVGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++L+ + Y+ AP EA+AQ LA + +V A +ED
Sbjct: 121 AEMVDKFAKRTVRVTRQHNDEAKKLLELMGIPYVNAPCEAEAQCAALARAGKVYAAASED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F I+ + F + + S K + FT + +++CIL GCDY +
Sbjct: 181 MDTMCFQAP-ILLRHLTFSEQRKEPISEYSFEKTIEGLNFTIEQFVDLCILLGCDYCDPI 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP 264
G+G RA LI + + D +K +P
Sbjct: 240 RGVGPARAVELIRQHGNLDNFVKDADKKKFPIP 272
>gi|363732508|ref|XP_419963.2| PREDICTED: flap endonuclease GEN homolog 1 [Gallus gallus]
Length = 639
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCK---GLPTSRHID 57
MG+ L +L+ + P+ + L+G +AVD W+ C + K G+ T H+
Sbjct: 1 MGVNNLWQILEPVRQPVSLSSLKGKTLAVDLSLWV------CEAQTVKKMIGVVTKPHLR 54
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKR-----ARSRKENLARAIECESEGNS 112
R + G+K + + +G +K + +KR S K +AR G S
Sbjct: 55 NLFFRYSFFTSMGIKLVFVMEGEAPKLKADTMSKRNEIRYGASNKHGVART------GRS 108
Query: 113 SASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDS 172
S SI E +Q+L+ V ++ A EA+A +L V+ IT D
Sbjct: 109 SFK------------SILKECLQLLECLGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDG 156
Query: 173 DLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL-QSL 231
D+ +G + + C + K+ G ++ L+ + +L GCDYL + +
Sbjct: 157 DVFLYGAQTVYRNFAMNSKEPHLDCYTMSSIKEKL--GCDRESLIGLAVLLGCDYLPKGI 214
Query: 232 PGMGLKRAHALISKFK 247
PG+G ++A LI +
Sbjct: 215 PGVGKEQALKLIETLR 230
>gi|405120385|gb|AFR95156.1| flap endonuclease [Cryptococcus neoformans var. grubii H99]
Length = 453
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 10/266 (3%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGL-----P 51
MGI+GL LL M +K L G VA+D +++ ++ ++ + L
Sbjct: 1 MGIKGLTGLLSENAPKCMKDHEMKTLFGRKVAIDASMSIYQFLIAVRQQDGQMLMNESGD 60
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
+ H+ +R + +G+KP IFDG +K KR R+E E + G
Sbjct: 61 VTSHLMGFFYRTIRMVDHGIKPCYIFDGKPPELKGSVLAKRFARREEAKEGEEEAKETGT 120
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ + ++ V ++ E ++L + + AP EA+AQ LA + +V A +ED
Sbjct: 121 AEDVDKLARRQVRVTREHNEECKKLLSLMGIPVVTAPGEAEAQCAELARAGKVYAAGSED 180
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
D + F S I+ + F + S + + L + +E+CIL GCDYL+
Sbjct: 181 MDTLTFN-SPILLRHLTFSEAKRMPISEIHLDVALRDLEMSMDQFIELCILLGCDYLEPC 239
Query: 232 PGMGLKRAHALISKFKSYDKVIKHLK 257
G+G K A L+ + + KV++H++
Sbjct: 240 KGIGPKTALKLMREHGTLGKVVEHIR 265
>gi|433637770|ref|YP_007283530.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
gi|433289574|gb|AGB15397.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
Length = 326
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 13/234 (5%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSRHIDYCMHRVNLLR------HYG 70
I ELEG VAVD ++WL++ + + + T+ + V +++ +
Sbjct: 15 IPFDELEGSVVAVDAHNWLYRYLTTTVKWTNSSIYTTADGTEVANLVGMVQGLPKFFEHD 74
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGNSSASYEFYQKAVDISPSI 129
+ P+++FDGG +K ++ R R ++E+ +E EG+ A + ++P+I
Sbjct: 75 IVPVMVFDGGPSELKTDEIESR-REQRESYEEQLEVAREEGDQVAIAQLESYTQRLTPTI 133
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
++L+ +V + AP E +AQ + + + V +ED D + FG R + ++
Sbjct: 134 QETSRELLRLLDVPVVEAPAEGEAQAANIVRNGDADYVGSEDYDALLFGSPRTLRQLTSK 193
Query: 190 GQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHALI 243
G + DL T + L+++ I+ G D+ + G+G K A +LI
Sbjct: 194 GDPELMDLQATLDDHDL-----TLEQLIDVAIMIGTDFNDGVDGIGPKTALSLI 242
>gi|378754698|gb|EHY64727.1| flap endonuclease 1-B [Nematocida sp. 1 ERTm2]
Length = 342
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 17/265 (6%)
Query: 1 MGIQGLLPLLKS----IMIPIHIKELEGCCVAVDTYSWLHKGALSCSREL----CKGLPT 52
MGI L LLK + I++ G VA+D L++ ++ + K T
Sbjct: 1 MGICKLTELLKEKAPKAIRSTQIEKYRGWKVAIDASMILYQSLVAIRYGMDSLKNKNGET 60
Query: 53 SRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE-CESEGN 111
+ H+ ++ L G+ P+ IFDG L P E R+RKE R +E E+E
Sbjct: 61 TAHLYGIFYKTINLIEKGIVPVYIFDG-LAPELKENILVERRARKEQAERDLEQAETESE 119
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +A A L+ + V Y+ AP EA+ L ++ V V++ED
Sbjct: 120 KMKHAKRTVRATKYHVESAQALLSAM---GVPYMTAPNEAEGFCAALNIANAVNGVVSED 176
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKD--LSFGGFTKQMLLEMCILSGCDYLQ 229
D + FG +++ + + F ++ + ++++ + D L G + ++MCIL GCDY Q
Sbjct: 177 MDSLAFG-GKVLLR-NFFPALMKKKMAVMEISLDEVLKQTGLDQAEFIDMCILLGCDYCQ 234
Query: 230 SLPGMGLKRAHALISKFKSYDKVIK 254
G+G K+ + L+ + +S +K+++
Sbjct: 235 KPKGLGPKKVYDLVQEHRSIEKIVE 259
>gi|356927843|gb|AET42633.1| flap endonuclease-1 [Emiliania huxleyi virus 202]
Length = 358
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 20/227 (8%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAI-ECESEG 110
+ H+ +R L G+KP+ +FDG P +++Q K R E A+A+ E +
Sbjct: 61 VTSHLTGLFYRTIRLIEAGIKPVYVFDGK--PPQLKQ--KELDKRNERQAQALSELKVTD 116
Query: 111 NSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITE 170
+S + +++V + + E+ ++L + + AP EA+A + + A TE
Sbjct: 117 DSYEIEKQEKRSVRATREQSEEVKKLLTFMGIPVVQAPCEAEATCAAYVKAGKAYATATE 176
Query: 171 DSDLIPFGCSRIIFKMDKFGQ----GVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCD 226
D D + FG + +I ++ Q VE+ + L+ G T +E+CILSGCD
Sbjct: 177 DMDSLTFGSTHVIRHINSTDQKKQPTVEYSLPNI-----LNDMGITMDQFIEICILSGCD 231
Query: 227 YLQSLPGMGLKRAHALISKFKSYDKVIKHLKYS------TVSVPPFY 267
Y +++ G+G RA+ LI + + + V+ LK VP +Y
Sbjct: 232 YTKTIKGIGPTRAYQLIQEHSTIENVLDVLKKKHGEEQFVTMVPEYY 278
>gi|118596628|dbj|BAF37974.1| flap endonuclease-1 [Thermoplasma sp. P61]
Length = 328
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 140/301 (46%), Gaps = 36/301 (11%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHR-VNLLRHYG 70
+K+ ++DTY+ L++ LS R+ G+P + H+ +R +NLL +
Sbjct: 16 LKDQSNQTFSIDTYNILYQ-LLSNVRQ-YDGMPLMDSHGNVTSHLYGIFYRTINLLEN-K 72
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
++P+ +FDG P+K ++R + KE +E E ++Y + I+P I
Sbjct: 73 IRPVYVFDGKPSPLKNRTISER-QLMKEKAKVELEEAIERGEEDLRQYYSRINYITPQIV 131
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
+ ++L + YI AP E +AQ +++ K V+ VI++D D + FG +I+ +G
Sbjct: 132 DDTKKLLDYMGIPYIDAPSEGEAQASYMT-KKNVDGVISQDYDCLLFGARKILRNFAIYG 190
Query: 191 QGVEFQCSMLQK--------NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHAL 242
+ + ++ + ++ LS + L+ + IL G D+ + + G+G K+A AL
Sbjct: 191 RRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGAKKALAL 250
Query: 243 ISKFKSYDKVIKHLKYSTVSVPPFYEESFGKAVLTFQHQRVYD-------PKTEDIVHLS 295
I K V++ + + E+ + + F++ V D P T+ I H
Sbjct: 251 IKKEGDIKAVLRRIGKNI--------ENLDEIIDFFKNPPVVDYDFKFRKPDTDAIEHFL 302
Query: 296 C 296
C
Sbjct: 303 C 303
>gi|166085101|dbj|BAF99815.1| flap endonuclease-1 [Aeropyrum pernix]
gi|166085103|dbj|BAF99816.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 401
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 18/253 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHRVNLLRHY 69
+ ++ L G +A+D Y+ L++ L+ R+ G P + H+ +R L
Sbjct: 68 VELRALSGYVLALDAYNMLYQ-FLTAIRQ-PDGTPLMDREGRVTSHLSGLFYRTINLVEE 125
Query: 70 GVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSI 129
G+KP+ +FDG MK + +R + + E AR G + ++ A ++ +
Sbjct: 126 GIKPVYVFDGKPPEMKSREVEERLKRKAEAEARYRRAVEAGEVEEARKYAMMAARLTSDM 185
Query: 130 AHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKF 189
E ++L + ++ AP E +AQ ++A A ++D D + FG R++ +
Sbjct: 186 VEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRNLAIT 245
Query: 190 G--------QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRAH 240
G Q VE + +++ LS G T++ L+ + IL G DY + G G K A
Sbjct: 246 GRRKLPGRDQYVEIKPEIIELETLLSKLGITREQLIAVGILLGTDYNPGGVRGYGPKTAL 305
Query: 241 ALISKFKSYDKVI 253
L+ KV+
Sbjct: 306 RLVKSLGDPMKVL 318
>gi|302796239|ref|XP_002979882.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
gi|302813529|ref|XP_002988450.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300143852|gb|EFJ10540.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300152642|gb|EFJ19284.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
Length = 377
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 55 HIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSA 114
H+ R L G+KP+ +FDG +K + KR R+E E +G +
Sbjct: 61 HLQGMFTRTVRLLESGMKPVYVFDGKPPELKKAELVKRGARREEATEGLTEAIEKGEVAD 120
Query: 115 SYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLA-VSKQVEAVITEDSD 173
++ ++ V ++ + ++L+ + I AP EA+A+ L K V AV +ED D
Sbjct: 121 IEKYSKRTVKVTKQHNEDCQKLLRLMGIPVIEAPCEAEAECAALCKADKVVYAVASEDMD 180
Query: 174 LIPFGCSRII-FKMDKFGQGV---EFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQ 229
+ FG R + M+ + + EFQ S + +LS F +++CIL GCDY
Sbjct: 181 SLTFGSPRFLRHLMEPASRKIPVMEFQISTALQELNLSMDQF-----IDLCILCGCDYCD 235
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVSVP---PFYE 268
++ G+G + A LI + + + V+++L +P P+ E
Sbjct: 236 TIRGIGPQTALKLIRQHSTLEAVLENLNKDRYQIPESWPYQE 277
>gi|429217578|ref|YP_007175568.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
gi|429134107|gb|AFZ71119.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
Length = 351
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 20/258 (7%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHR-VNLLRH 68
I +K L+G VA+D Y+ L++ L+ R+ G P + HI +R +NL+
Sbjct: 20 IDLKALKGYTVALDGYNMLYQ-FLAAIRQ-PDGTPLIDSKGNITSHISGLFYRTINLIEE 77
Query: 69 YGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPS 128
GVKPI +FDG MK ++ R R++ + + + EG + ++ Q + +S
Sbjct: 78 -GVKPIYVFDGKPPEMKKKEIEDRINRRQQYAEKYQKAKQEGKIEEAKKYAQASTSLSNK 136
Query: 129 IAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDK 188
+ + Q+L + ++ AP + +AQ ++A V A ++D D + FG +++ +
Sbjct: 137 MVEDAKQLLTYMGIPWVQAPADGEAQAAYMAKKGDVYATGSQDYDSLLFGSPKLLRNLAI 196
Query: 189 FG--------QGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY-LQSLPGMGLKRA 239
G + +E + ++ N L T++ L+ + IL G D+ G G K A
Sbjct: 197 TGKRKLPNKEEYIEIKPELINLNDMLKALEITREQLIVIGILLGTDFNPDGFKGYGPKTA 256
Query: 240 HALISKFKSYDKVIKHLK 257
+ + + K + LK
Sbjct: 257 LKYVKEHRDPIKALSSLK 274
>gi|401825763|ref|XP_003886976.1| flap endonuclease-1 [Encephalitozoon hellem ATCC 50504]
gi|392998133|gb|AFM97995.1| flap endonuclease-1 [Encephalitozoon hellem ATCC 50504]
Length = 345
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 7/213 (3%)
Query: 46 LCKGLPTSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIE 105
L G T+ H+ +R + G+ P+ +FDG +K+++ KR R E
Sbjct: 53 LGSGDATTSHLVGLFYRTIRMVELGITPVYVFDGAPPEIKMKELGKRNERRAMADKEYRE 112
Query: 106 CESEGNSSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVE 165
G+ + ++ ++ E ++L + + AP EA+A FL + V
Sbjct: 113 ASEAGDKRLMEMYDKRKTKVTGVHVEECKRLLGLMGIPFETAPSEAEAYCAFLCRKRIVY 172
Query: 166 AVITEDSDLIPFGCSRIIFKMDKFGQGVEF---QCSMLQKNKDLSFGGFTKQMLLEMCIL 222
V TED D + FG S ++ + Q + + ++ Q +DLS + +++CIL
Sbjct: 173 GVATEDMDSLTFG-SPVVLRNFSGAQSKKLPVVEYNLRQLLEDLS---LEQNEFIDLCIL 228
Query: 223 SGCDYLQSLPGMGLKRAHALISKFKSYDKVIKH 255
GCDY +L G+G K+A LI K +S +++++
Sbjct: 229 LGCDYCDTLKGIGPKKALGLIRKHRSIERILQE 261
>gi|352681676|ref|YP_004892200.1| flap-structure endonuclease [Thermoproteus tenax Kra 1]
gi|350274475|emb|CCC81120.1| flap-structure endonuclease [Thermoproteus tenax Kra 1]
Length = 346
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 1 MGIQGLLPLL-KSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLPTSR----- 54
MG+ L L+ K + +++L G +A+D Y+ L++ S + L SR
Sbjct: 1 MGVTELGKLIPKEARKELKLEQLSGRVIALDAYNALYQFLASIRQPDGTPLMDSRGRVTS 60
Query: 55 HIDYCMHRVNLLRHYGVKPILIFDGGLLPMK-IEQENKRARSRK--ENLARAIECESEGN 111
H++ +R L G++P+ +FDG +K E E +RA K E +A+A +EG
Sbjct: 61 HLNGLFYRTINLVEAGIRPVYVFDGKPPELKRREIEARRAAKEKAREQMAKAA---AEGK 117
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ ++ ++ V I+ S+A + +L + ++ AP E +AQ +A ++D
Sbjct: 118 TEEVAKYAKRVVYITDSMAEDAKALLTAMGIPWVQAPSEGEAQAAHMAAKGSAWGAGSQD 177
Query: 172 SDLIPFGCSRIIFKM-----DKFGQG-VEFQCSMLQKNKDL-SFGGFTKQMLLEMCILSG 224
D + FG R++ + K G+ VE +++ L + +++ L+++ IL G
Sbjct: 178 YDSLLFGAPRLVRNLAVSSRRKVGEEYVEVPPEVIELESALRALKLKSREQLIDLAILLG 237
Query: 225 CDY-LQSLPGMGLKRAHALISKFKSYDKVIK 254
DY +PG+G +RA +I + S + ++
Sbjct: 238 TDYNPDGVPGVGPQRALKIIQEHGSLENALR 268
>gi|255513611|gb|EET89877.1| XPG I domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 352
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 130/314 (41%), Gaps = 45/314 (14%)
Query: 17 IHIKELEGCCVAVDTYSWLHKGALSCSRE-----LC--KGLPTSRHIDYCMHRVNLLRHY 69
+ I L G VAVD Y+ L++ LS R+ LC KG TS H+ +R L
Sbjct: 17 LDIGSLSGKVVAVDAYNVLYQ-FLSIIRQPDGSLLCDEKGNVTS-HLSGLFYRSIDLIAK 74
Query: 70 GVKPILIFDGGLLPMKIEQENKRAR-SRKENLARAIE-CESEGNSSASYEFYQKAVDISP 127
GV + +FDG +P ++++ AR SR+E A + +EG + +F Q + I+
Sbjct: 75 GVNLVYVFDG--MPSTLKKKTIEARISRREKAYEAWQKAVAEGQAEEVRKFAQASTRITK 132
Query: 128 SIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMD 187
I ++L + YI AP E +AQ +++ A ++D D + FG +++ +
Sbjct: 133 EIVSSAKELLGYMGIWYINAPSEGEAQASYMCSKGIAYAAASQDYDTLLFGSKKVVRNLT 192
Query: 188 KFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRA 239
G+ V M+ + L G T+Q L+ + IL G D+ + G+G K A
Sbjct: 193 LSGRRKLPGKNVFVNVNPEMVDLDATLGSLGITRQKLIWIGILLGTDFNDGVKGVGPKTA 252
Query: 240 HALISKFKSYDKVIKHLK-----------------YSTVSVPPFYEESFGKAVLTFQHQR 282
+ S +I+ K + V E GK V
Sbjct: 253 LKAVKSSNSITDIIEFAKQKFNYEFEVDPKDVEDLFMHPEVSEITEAELGKGVSK----- 307
Query: 283 VYDPKTEDIVHLSC 296
P E I+H C
Sbjct: 308 --SPDAEKIIHFMC 319
>gi|330835718|ref|YP_004410446.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
gi|329567857|gb|AEB95962.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
Length = 301
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 55 HIDYCMHR-VNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
H++ +R VNLL GV PI +FDG +K ++ R + ++E + + + EG
Sbjct: 10 HLNGLFYRTVNLLEQ-GVIPIYVFDGKPPEIKAQELENRRKLKEEAMKKLERAKEEGKIE 68
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
++ Q ++ S+A+E ++L + + AP E +A+ ++ V A ++D D
Sbjct: 69 EVRKYSQMTSRLTSSMANEGKRLLSLMGIPTVQAPSEGEAEAAYMNSQGLVYAAASQDYD 128
Query: 174 LIPFGCSRIIFKMDKFGQG--------VEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGC 225
+ FG +R+I + G+ VE + +++ + L G T+ L+++ IL G
Sbjct: 129 SLLFGATRLIRNLTISGKRKLPNKDAYVEVKPEVIEADLLLKKLGITRDELIDIAILIGT 188
Query: 226 DY-LQSLPGMGLKRAHALISKFKSYDKVIK 254
DY + G+G KRA+ LI +K + + K
Sbjct: 189 DYNPDGIKGIGPKRAYKLIKTYKRIEDIDK 218
>gi|118596596|dbj|BAF37957.1| flap endonuclease-1 [Thermoplasma sp. S01]
Length = 336
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 44/305 (14%)
Query: 19 IKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TSRHIDYCMHR-VNLLRHYG 70
+K+ ++DTY+ L++ LS R+ G+P + H+ +R +NLL +
Sbjct: 16 LKDQGNQTFSIDTYNILYQ-LLSNVRQ-YDGMPLMDSHGNVTSHLYGIFYRTINLLEN-K 72
Query: 71 VKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYEFYQKAVDISPSIA 130
++P+ +FDG P+K ++R + KE +E E ++Y + I+P I
Sbjct: 73 IRPVYVFDGKPSPLKNRTISER-QLMKEKAKVELEEAIERGEEDLRQYYSRINYITPQIV 131
Query: 131 HELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFG 190
++ ++L + Y+ AP E +AQ +++ K V+ VI++D D + FG +++ +G
Sbjct: 132 NDTKKLLDYMGIPYVDAPSEGEAQASYMT-RKNVDGVISQDYDCLLFGARKVLRNFAIYG 190
Query: 191 QGVEFQCSMLQK--------NKDLSFGGFTKQMLLEMCILSGCDYLQSLPGMGLKRAHAL 242
+ + ++ + ++ LS + L+ + IL G D+ + + G+G K+A AL
Sbjct: 191 RRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGAKKALAL 250
Query: 243 ISKFKSYDKVIKHLKYSTVSV---------PPF--YEESFGKAVLTFQHQRVYDPKTEDI 291
I K V++ + ++ PP Y+ FGK P T+ I
Sbjct: 251 IKKEGDIKAVLRRIGKDIENLDEIIDFFKNPPVVDYDFRFGK------------PDTDAI 298
Query: 292 VHLSC 296
H C
Sbjct: 299 EHFLC 303
>gi|88603762|ref|YP_503940.1| flap endonuclease-1 [Methanospirillum hungatei JF-1]
gi|121721338|sp|Q2FNC9.1|FEN_METHJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|88189224|gb|ABD42221.1| flap endonuclease 1 [Methanospirillum hungatei JF-1]
Length = 333
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 22/270 (8%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCKGLP-------TS 53
MG+ L +L + P EL+G A+D ++ L++ LS R+ G P +
Sbjct: 1 MGV-ALRDILTDLKRPAETDELKGVA-AIDAFNALYQ-FLSIIRQ-PDGTPLMDDSGRIT 56
Query: 54 RHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSS 113
H+ R G++P+ IFDG MK +R R+E+ + + + EG+ +
Sbjct: 57 SHLSGIFFRTANFLTQGIRPVFIFDGKSPEMKGRTIQERRDVREESKEKWDQAKKEGDLA 116
Query: 114 ASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSD 173
++ + + I I Q+++ + + AP E +AQ ++ + + V+++D D
Sbjct: 117 GAFRYAMSSTAIDAYILSSARQLIQLMGLPVVDAPSEGEAQGAYMVLKGDADYVVSQDYD 176
Query: 174 LIPFGCSRII------FKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDY 227
+ FG ++ K G+ + Q + + LS T++ L+E+ IL+G D+
Sbjct: 177 TLLFGTPVLVRNLTISGKRRLHGRQITVQPERIVLSDVLSTLDITREQLIEIAILTGTDF 236
Query: 228 LQSLPGMGLKRAHALISKFKS--YDKVIKH 255
+ G+G K + K KS +D +I+
Sbjct: 237 NPGIRGIGAKTG---LKKIKSGEFDSIIRE 263
>gi|326916541|ref|XP_003204565.1| PREDICTED: flap endonuclease GEN homolog 1-like, partial [Meleagris
gallopavo]
Length = 897
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 25/251 (9%)
Query: 1 MGIQGLLPLLKSIMIPIHIKELEGCCVAVDTYSWLHKGALSCSRELCK---GLPTSRHID 57
MG+ L +L+ + P+ + L+G +AVD W+ C + K G+ T H+
Sbjct: 1 MGVTNLWQILEPVRQPVSLSSLKGKTLAVDLSLWV------CEAQTVKKMIGVVTKPHLR 54
Query: 58 YCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGNSSASYE 117
R + G+K + + +G +K + +KR N R G +
Sbjct: 55 NLFFRYSFFTSMGIKLVFVMEGEAPKLKADTMSKR------NEMRYGASNKHGAARTGRS 108
Query: 118 FYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPF 177
++ SI E +Q+L+ V ++ A EA+A +L V+ IT D D+ +
Sbjct: 109 LFK-------SILKECLQLLECLGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDGDVFLY 161
Query: 178 GCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQMLLEMCILSGCDYL-QSLPGMGL 236
G + + C + K+ G ++ L+ + +L GCDYL + +PG+G
Sbjct: 162 GAQTVYRNFAMNSKEPHLDCYTMSSIKEKL--GCDRESLIGLAVLLGCDYLPKGVPGVGK 219
Query: 237 KRAHALISKFK 247
++A LI +
Sbjct: 220 EQALKLIETLR 230
>gi|331236892|ref|XP_003331104.1| exonuclease 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309310094|gb|EFP86685.1| exonuclease 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 101
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 54/90 (60%)
Query: 142 VSYIVAPYEADAQMTFLAVSKQVEAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQCSMLQ 201
V Y+VA YEADAQ+ +L + +V +ITEDSDL+ +G I+F MD G + + L
Sbjct: 3 VKYVVALYEADAQLQYLEMKGEVHGIITEDSDLLVYGARNILFTMDPSGPCIYICRNKLG 62
Query: 202 KNKDLSFGGFTKQMLLEMCILSGCDYLQSL 231
+ D G + +Q +M +LSGCDYL +
Sbjct: 63 QVDDKRMGPWDEQQFRQMAMLSGCDYLSRI 92
>gi|353235791|emb|CCA67798.1| probable DNA repair endonuclease rad2 [Piriformospora indica DSM
11827]
Length = 366
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Query: 52 TSRHIDYCMHRVNLLRHYGVKPILIFDGGLLPMKIEQENKRARSRKENLARAIECESEGN 111
T+ H+ +R + G+KP +FDG +K KR R+E E + G
Sbjct: 25 TTSHLMGFFYRTIRMVENGIKPCYVFDGKPPELKSGVLAKRFERREEAKEEGDEAKEVGT 84
Query: 112 SSASYEFYQKAVDISPSIAHELIQVLKQQNVSYIVAPYEADAQMTFLAVSKQVEAVITED 171
+ +F ++ V ++ E ++L + +VAP EA+AQ LA V +ED
Sbjct: 85 TEEVEKFSRRQVRVTKEHNEECRKLLGLMGIPVVVAPSEAEAQCAELARGGLVYGAGSED 144
Query: 172 SDLIPFGCSRIIFKMDKFGQGVEFQCSMLQKNKDLSFGGFTKQM--LLEMCILSGCDYLQ 229
D + F S I+ + F + + +L+ + G M +E+CIL GCDYL+
Sbjct: 145 MDTLTFN-SPILLRHLTFSENR--KEPILEISLPAVLEGLEMDMPQFVELCILLGCDYLE 201
Query: 230 SLPGMGLKRAHALISKFKSYDKVIKHLKYSTVS 262
+ G+G K A L+ + S V++HL+ S
Sbjct: 202 PIKGVGPKSALKLLREHGSLGAVVEHLRSKQAS 234
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,217,715,513
Number of Sequences: 23463169
Number of extensions: 428519391
Number of successful extensions: 1036646
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 708
Number of HSP's that attempted gapping in prelim test: 1031232
Number of HSP's gapped (non-prelim): 3217
length of query: 672
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 522
effective length of database: 8,839,720,017
effective search space: 4614333848874
effective search space used: 4614333848874
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)