Query 005870
Match_columns 672
No_of_seqs 362 out of 2616
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 14:58:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005870.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005870hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 5E-115 1E-119 927.4 51.0 643 17-667 3-761 (972)
2 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-112 4E-117 974.7 67.9 612 36-665 1-615 (755)
3 PRK10517 magnesium-transportin 100.0 1E-111 2E-116 979.6 69.3 634 17-666 48-719 (902)
4 KOG0205 Plasma membrane H+-tra 100.0 4E-114 9E-119 891.7 43.9 657 8-664 8-664 (942)
5 PRK15122 magnesium-transportin 100.0 3E-111 7E-116 977.0 69.0 640 17-665 26-718 (903)
6 COG0474 MgtA Cation transport 100.0 2E-112 3E-117 989.4 57.5 645 15-667 20-722 (917)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-111 7E-116 987.1 66.8 641 15-666 4-828 (1053)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-110 3E-115 970.7 70.4 634 17-666 14-684 (867)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 9E-108 2E-112 961.4 69.5 650 15-666 14-766 (997)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 1E-107 3E-112 957.8 68.5 642 22-666 43-751 (941)
11 KOG0204 Calcium transporting A 100.0 2E-109 4E-114 883.4 43.1 645 22-667 102-822 (1034)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-106 2E-111 944.7 68.7 631 16-665 2-699 (884)
13 TIGR01657 P-ATPase-V P-type AT 100.0 6E-102 1E-106 918.0 59.9 620 34-666 137-881 (1054)
14 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.3E-98 5E-103 876.3 62.2 600 65-666 1-712 (917)
15 KOG0203 Na+/K+ ATPase, alpha s 100.0 4.7E-96 1E-100 779.8 28.0 664 3-668 23-790 (1019)
16 PRK14010 potassium-transportin 100.0 9.2E-92 2E-96 777.5 54.3 542 67-665 28-584 (673)
17 PRK01122 potassium-transportin 100.0 1.3E-89 2.8E-94 761.2 58.6 536 67-658 29-581 (679)
18 TIGR01652 ATPase-Plipid phosph 100.0 1.4E-89 2.9E-94 815.3 51.4 609 49-666 1-850 (1057)
19 COG2217 ZntA Cation transport 100.0 3.9E-88 8.4E-93 748.5 54.6 511 96-670 173-685 (713)
20 KOG0208 Cation transport ATPas 100.0 7.7E-88 1.7E-92 727.5 48.4 630 26-669 150-936 (1140)
21 TIGR01497 kdpB K+-transporting 100.0 1.4E-85 3.1E-90 727.0 56.9 539 67-660 28-584 (675)
22 PLN03190 aminophospholipid tra 100.0 6.4E-85 1.4E-89 766.7 53.6 608 48-666 86-953 (1178)
23 PRK11033 zntA zinc/cadmium/mer 100.0 8.5E-82 1.9E-86 719.6 55.0 506 96-669 205-713 (741)
24 KOG0207 Cation transport ATPas 100.0 5.7E-82 1.2E-86 682.9 37.1 522 93-669 337-870 (951)
25 TIGR01512 ATPase-IB2_Cd heavy 100.0 4.6E-78 1E-82 669.3 52.7 505 77-670 5-512 (536)
26 TIGR01525 ATPase-IB_hvy heavy 100.0 1.3E-77 2.8E-82 670.1 56.2 522 78-670 6-533 (556)
27 TIGR01494 ATPase_P-type ATPase 100.0 3.9E-78 8.4E-83 668.4 49.9 477 104-668 3-485 (499)
28 TIGR01511 ATPase-IB1_Cu copper 100.0 1.1E-76 2.3E-81 660.4 57.5 497 96-669 53-551 (562)
29 PRK10671 copA copper exporting 100.0 1.4E-75 3E-80 682.1 57.0 507 96-665 285-793 (834)
30 KOG0209 P-type ATPase [Inorgan 100.0 9.3E-76 2E-80 620.2 28.7 563 35-614 161-836 (1160)
31 KOG0206 P-type ATPase [General 100.0 1.2E-72 2.5E-77 640.2 29.8 611 45-666 28-876 (1151)
32 KOG0210 P-type ATPase [Inorgan 100.0 6.4E-70 1.4E-74 566.1 28.5 594 44-653 74-850 (1051)
33 COG2216 KdpB High-affinity K+ 100.0 4.8E-62 1E-66 494.6 33.4 479 108-642 77-567 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.4E-36 3E-41 303.4 21.5 220 103-323 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 8.7E-25 1.9E-29 215.9 12.0 211 327-604 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 6.6E-15 1.4E-19 124.6 10.8 116 482-626 20-138 (152)
37 PRK10513 sugar phosphate phosp 99.5 1.7E-13 3.7E-18 140.3 11.1 67 572-638 196-266 (270)
38 PRK01158 phosphoglycolate phos 99.4 3.7E-13 8.1E-18 134.3 9.5 154 485-638 12-227 (230)
39 PRK10976 putative hydrolase; P 99.4 3.9E-13 8.4E-18 137.3 8.9 67 572-638 190-262 (266)
40 COG0561 Cof Predicted hydrolas 99.4 4.8E-13 1E-17 136.4 9.1 154 485-638 12-259 (264)
41 PRK15126 thiamin pyrimidine py 99.4 7.7E-13 1.7E-17 135.5 10.3 66 572-637 188-259 (272)
42 TIGR01487 SPP-like sucrose-pho 99.4 6.1E-13 1.3E-17 131.2 7.7 145 492-636 18-215 (215)
43 PLN02887 hydrolase family prot 99.3 4.2E-12 9.1E-17 140.3 11.0 66 573-638 508-577 (580)
44 PF00690 Cation_ATPase_N: Cati 99.3 2.7E-12 5.9E-17 101.4 6.6 67 18-84 1-69 (69)
45 TIGR01482 SPP-subfamily Sucros 99.3 3.7E-12 8E-17 126.7 9.2 146 492-637 15-222 (225)
46 PRK10530 pyridoxal phosphate ( 99.3 1.1E-11 2.3E-16 127.2 11.6 66 572-637 199-268 (272)
47 PF08282 Hydrolase_3: haloacid 99.3 1.6E-11 3.4E-16 124.0 10.1 66 571-636 185-254 (254)
48 TIGR01486 HAD-SF-IIB-MPGP mann 99.2 8.6E-11 1.9E-15 119.2 13.1 62 577-638 185-254 (256)
49 TIGR02726 phenyl_P_delta pheny 99.2 6.5E-11 1.4E-15 110.7 9.6 107 499-633 41-147 (169)
50 PRK11133 serB phosphoserine ph 99.2 8.5E-11 1.8E-15 121.7 10.8 127 492-637 181-316 (322)
51 PRK03669 mannosyl-3-phosphogly 99.2 2.1E-10 4.5E-15 117.4 12.7 63 576-638 195-266 (271)
52 TIGR02137 HSK-PSP phosphoserin 99.1 3E-10 6.6E-15 110.1 11.3 130 492-639 68-198 (203)
53 TIGR01670 YrbI-phosphatas 3-de 99.1 2.5E-10 5.5E-15 105.9 9.5 110 500-637 36-146 (154)
54 TIGR00099 Cof-subfamily Cof su 99.1 2.3E-10 5.1E-15 116.1 9.3 65 572-636 188-256 (256)
55 PRK00192 mannosyl-3-phosphogly 99.0 2.8E-09 6.1E-14 109.1 12.8 67 572-638 190-268 (273)
56 COG1778 Low specificity phosph 99.0 1.6E-09 3.6E-14 95.6 7.1 115 499-645 42-164 (170)
57 smart00831 Cation_ATPase_N Cat 98.9 2.4E-09 5.3E-14 83.3 7.1 59 29-87 2-62 (64)
58 COG0560 SerB Phosphoserine pho 98.9 4.3E-09 9.2E-14 102.6 8.4 114 491-624 76-199 (212)
59 PRK09484 3-deoxy-D-manno-octul 98.9 1.1E-08 2.3E-13 98.0 9.7 103 499-633 55-161 (183)
60 TIGR02471 sucr_syn_bact_C sucr 98.9 5.9E-09 1.3E-13 104.3 8.3 67 572-638 159-233 (236)
61 TIGR00338 serB phosphoserine p 98.9 8.6E-09 1.9E-13 101.9 9.4 128 492-635 85-218 (219)
62 TIGR01485 SPP_plant-cyano sucr 98.7 5.6E-08 1.2E-12 98.1 9.9 149 490-638 19-245 (249)
63 PF13246 Hydrolase_like2: Puta 98.7 3.9E-08 8.4E-13 82.1 6.4 65 374-439 20-90 (91)
64 PRK13582 thrH phosphoserine ph 98.7 1.7E-07 3.6E-12 91.7 11.9 128 492-637 68-196 (205)
65 PLN02382 probable sucrose-phos 98.6 2.4E-07 5.1E-12 99.8 10.8 146 493-638 29-258 (413)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 4.3E-07 9.3E-12 88.4 9.2 117 492-621 80-200 (201)
67 TIGR03333 salvage_mtnX 2-hydro 98.5 9.5E-07 2.1E-11 86.9 11.3 139 491-637 69-209 (214)
68 KOG1615 Phosphoserine phosphat 98.5 2.1E-07 4.5E-12 85.3 5.8 114 492-622 88-213 (227)
69 KOG4383 Uncharacterized conser 98.4 0.0001 2.2E-09 79.4 25.5 184 480-663 814-1103(1354)
70 TIGR02463 MPGP_rel mannosyl-3- 98.4 2E-06 4.3E-11 85.2 10.3 40 493-532 17-56 (221)
71 PRK09552 mtnX 2-hydroxy-3-keto 98.3 2.2E-06 4.8E-11 84.7 10.1 135 492-636 74-212 (219)
72 TIGR02461 osmo_MPG_phos mannos 98.3 1.6E-06 3.5E-11 85.8 8.9 49 485-533 8-56 (225)
73 PRK10187 trehalose-6-phosphate 98.3 1.4E-06 2.9E-11 88.6 8.1 140 492-637 36-241 (266)
74 PLN02954 phosphoserine phospha 98.3 5.4E-06 1.2E-10 82.2 11.9 124 492-634 84-221 (224)
75 COG0546 Gph Predicted phosphat 98.3 5E-06 1.1E-10 82.1 11.5 126 491-637 88-218 (220)
76 PRK13222 phosphoglycolate phos 98.3 6.1E-06 1.3E-10 81.9 12.0 128 491-639 92-224 (226)
77 PF12710 HAD: haloacid dehalog 98.3 1.1E-06 2.4E-11 84.8 5.6 92 495-601 92-192 (192)
78 TIGR01454 AHBA_synth_RP 3-amin 98.2 1.1E-05 2.3E-10 78.9 10.9 124 492-636 75-203 (205)
79 TIGR01488 HAD-SF-IB Haloacid D 98.1 5.6E-06 1.2E-10 78.7 6.8 98 493-603 74-177 (177)
80 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1E-05 2.2E-10 77.7 8.5 113 492-608 72-186 (188)
81 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 9.8E-06 2.1E-10 78.9 8.3 102 491-610 86-197 (202)
82 PRK14502 bifunctional mannosyl 98.1 1.2E-05 2.6E-10 89.3 8.8 48 485-532 425-473 (694)
83 PTZ00174 phosphomannomutase; P 98.0 1.5E-05 3.2E-10 80.3 8.8 54 571-624 187-245 (247)
84 cd01427 HAD_like Haloacid deha 98.0 1.9E-05 4.2E-10 70.9 8.2 117 489-608 21-138 (139)
85 PRK13223 phosphoglycolate phos 98.0 4.5E-05 9.8E-10 77.9 11.2 126 491-637 100-230 (272)
86 PRK13288 pyrophosphatase PpaX; 98.0 4.6E-05 1E-09 75.0 10.4 124 492-636 82-210 (214)
87 PRK12702 mannosyl-3-phosphogly 97.9 5.2E-05 1.1E-09 76.0 10.0 43 491-533 17-59 (302)
88 TIGR01449 PGP_bact 2-phosphogl 97.9 4.6E-05 1E-09 74.8 9.7 121 492-633 85-210 (213)
89 PRK10826 2-deoxyglucose-6-phos 97.8 8.5E-05 1.8E-09 73.5 9.8 122 491-633 91-216 (222)
90 PRK13226 phosphoglycolate phos 97.8 0.00011 2.5E-09 73.0 10.3 124 492-636 95-224 (229)
91 PRK08238 hypothetical protein; 97.8 0.00011 2.4E-09 80.5 10.7 98 492-615 72-170 (479)
92 TIGR03351 PhnX-like phosphonat 97.8 0.00017 3.6E-09 71.3 10.9 124 491-634 86-217 (220)
93 PF05116 S6PP: Sucrose-6F-phos 97.7 6.9E-05 1.5E-09 75.3 7.1 68 571-638 164-244 (247)
94 PRK14501 putative bifunctional 97.7 0.00035 7.7E-09 81.5 13.8 172 447-637 480-721 (726)
95 PRK13478 phosphonoacetaldehyde 97.7 0.00033 7.2E-09 71.4 11.9 96 492-605 101-197 (267)
96 TIGR01422 phosphonatase phosph 97.7 0.00034 7.4E-09 70.7 11.4 98 492-607 99-197 (253)
97 TIGR01484 HAD-SF-IIB HAD-super 97.7 0.00012 2.5E-09 71.5 7.4 39 492-530 17-55 (204)
98 TIGR01544 HAD-SF-IE haloacid d 97.6 0.00084 1.8E-08 67.6 13.4 127 491-636 120-273 (277)
99 PLN03243 haloacid dehalogenase 97.6 0.00043 9.2E-09 70.1 11.0 116 492-626 109-226 (260)
100 PRK11590 hypothetical protein; 97.6 0.00035 7.5E-09 68.5 9.7 106 492-611 95-203 (211)
101 PLN02770 haloacid dehalogenase 97.6 0.00054 1.2E-08 69.0 11.1 117 492-627 108-228 (248)
102 PRK13225 phosphoglycolate phos 97.5 0.00078 1.7E-08 68.6 11.2 121 492-636 142-267 (273)
103 TIGR01545 YfhB_g-proteo haloac 97.5 0.00048 1E-08 67.3 9.0 106 492-610 94-201 (210)
104 PRK11587 putative phosphatase; 97.4 0.00091 2E-08 65.9 10.1 115 492-626 83-199 (218)
105 TIGR02253 CTE7 HAD superfamily 97.4 0.00068 1.5E-08 66.9 8.9 97 492-607 94-191 (221)
106 TIGR01548 HAD-SF-IA-hyp1 haloa 97.3 0.00073 1.6E-08 65.5 8.4 93 491-603 105-197 (197)
107 PLN02779 haloacid dehalogenase 97.3 0.00091 2E-08 68.8 9.4 118 492-626 144-264 (286)
108 COG4030 Uncharacterized protei 97.3 0.0027 5.7E-08 60.1 10.9 146 492-638 83-263 (315)
109 PLN02580 trehalose-phosphatase 97.3 0.0016 3.5E-08 68.7 10.3 63 571-637 300-374 (384)
110 PRK06769 hypothetical protein; 97.2 0.0014 2.9E-08 62.1 8.7 99 493-609 29-135 (173)
111 PRK11009 aphA acid phosphatase 97.2 0.00094 2E-08 66.1 7.7 90 492-607 114-207 (237)
112 TIGR01428 HAD_type_II 2-haloal 97.2 0.0013 2.8E-08 63.7 8.3 98 492-608 92-189 (198)
113 PRK14988 GMP/IMP nucleotidase; 97.2 0.0011 2.4E-08 65.6 7.8 102 492-612 93-196 (224)
114 PRK06698 bifunctional 5'-methy 97.1 0.0018 4E-08 71.4 9.9 123 492-638 330-455 (459)
115 PRK08942 D,D-heptose 1,7-bisph 97.1 0.0032 6.9E-08 60.1 10.3 126 493-637 30-177 (181)
116 PLN02575 haloacid dehalogenase 97.1 0.0031 6.8E-08 66.6 10.7 120 492-632 216-337 (381)
117 PHA02530 pseT polynucleotide k 97.1 0.0017 3.7E-08 67.4 8.7 109 489-608 184-293 (300)
118 TIGR02254 YjjG/YfnB HAD superf 97.1 0.0025 5.4E-08 63.0 9.1 121 492-634 97-222 (224)
119 TIGR01662 HAD-SF-IIIA HAD-supe 97.0 0.0022 4.7E-08 57.7 7.7 93 492-607 25-127 (132)
120 smart00775 LNS2 LNS2 domain. T 97.0 0.0042 9E-08 57.6 9.6 103 490-606 25-141 (157)
121 PF13419 HAD_2: Haloacid dehal 97.0 0.00091 2E-08 62.9 5.2 97 492-607 77-173 (176)
122 TIGR01990 bPGM beta-phosphoglu 97.0 0.0014 3E-08 62.7 6.1 95 492-607 87-181 (185)
123 TIGR01672 AphA HAD superfamily 96.9 0.0019 4.2E-08 63.9 6.8 88 493-606 115-206 (237)
124 TIGR01509 HAD-SF-IA-v3 haloaci 96.9 0.0037 8.1E-08 59.4 8.4 95 492-606 85-179 (183)
125 COG4359 Uncharacterized conser 96.9 0.0019 4.1E-08 59.2 5.6 105 492-610 73-185 (220)
126 PRK09449 dUMP phosphatase; Pro 96.8 0.0062 1.3E-07 60.2 9.5 123 492-636 95-222 (224)
127 TIGR02009 PGMB-YQAB-SF beta-ph 96.8 0.0023 4.9E-08 61.1 6.2 95 492-607 88-182 (185)
128 TIGR01668 YqeG_hyp_ppase HAD s 96.8 0.0061 1.3E-07 57.5 8.8 110 454-608 20-133 (170)
129 PLN02940 riboflavin kinase 96.8 0.0049 1.1E-07 66.1 8.9 115 492-625 93-211 (382)
130 TIGR01656 Histidinol-ppas hist 96.7 0.0043 9.4E-08 56.9 6.7 100 492-608 27-142 (147)
131 TIGR00213 GmhB_yaeD D,D-heptos 96.7 0.0078 1.7E-07 57.1 8.5 120 493-625 27-169 (176)
132 TIGR01261 hisB_Nterm histidino 96.6 0.0043 9.3E-08 57.8 6.1 98 492-609 29-145 (161)
133 TIGR02252 DREG-2 REG-2-like, H 96.4 0.0087 1.9E-07 58.1 7.4 95 492-606 105-200 (203)
134 TIGR01685 MDP-1 magnesium-depe 96.4 0.011 2.3E-07 55.7 7.5 106 489-610 42-156 (174)
135 COG2179 Predicted hydrolase of 96.3 0.028 6E-07 51.2 9.3 112 450-606 19-133 (175)
136 TIGR01549 HAD-SF-IA-v1 haloaci 96.2 0.0075 1.6E-07 55.7 5.5 90 493-604 65-154 (154)
137 PLN02205 alpha,alpha-trehalose 96.2 0.04 8.8E-07 64.8 12.6 68 448-528 585-653 (854)
138 PLN02811 hydrolase 96.1 0.017 3.7E-07 56.9 7.8 101 492-609 78-182 (220)
139 smart00577 CPDc catalytic doma 96.1 0.0074 1.6E-07 55.5 4.6 97 491-609 44-140 (148)
140 PLN03017 trehalose-phosphatase 96.1 0.082 1.8E-06 55.5 12.6 63 571-637 282-356 (366)
141 TIGR01691 enolase-ppase 2,3-di 95.7 0.032 7E-07 54.8 7.4 99 490-609 93-194 (220)
142 TIGR00685 T6PP trehalose-phosp 95.6 0.014 3.1E-07 58.5 4.8 66 568-637 163-240 (244)
143 TIGR01664 DNA-3'-Pase DNA 3'-p 95.6 0.04 8.7E-07 51.6 7.5 93 494-607 44-158 (166)
144 TIGR01533 lipo_e_P4 5'-nucleot 95.5 0.061 1.3E-06 54.2 8.9 87 491-602 117-206 (266)
145 PLN02919 haloacid dehalogenase 95.5 0.071 1.5E-06 64.7 10.9 127 493-637 162-292 (1057)
146 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.5 0.088 1.9E-06 52.7 10.0 94 485-604 17-115 (242)
147 TIGR01681 HAD-SF-IIIC HAD-supe 95.5 0.041 8.9E-07 49.1 6.7 93 492-602 29-126 (128)
148 COG3769 Predicted hydrolase (H 95.4 0.12 2.7E-06 49.1 9.7 37 496-532 27-63 (274)
149 TIGR01675 plant-AP plant acid 95.4 0.075 1.6E-06 52.1 8.6 88 491-598 119-210 (229)
150 PRK05446 imidazole glycerol-ph 95.2 0.045 9.8E-07 57.5 7.0 100 492-609 30-146 (354)
151 PF06888 Put_Phosphatase: Puta 95.2 0.071 1.5E-06 52.6 7.8 104 492-600 71-185 (234)
152 TIGR02247 HAD-1A3-hyp Epoxide 95.1 0.026 5.7E-07 55.2 4.6 98 492-608 94-193 (211)
153 PRK09456 ?-D-glucose-1-phospha 95.1 0.058 1.3E-06 52.2 7.0 99 492-609 84-183 (199)
154 PRK10563 6-phosphogluconate ph 95.1 0.048 1E-06 53.7 6.5 97 492-609 88-184 (221)
155 KOG3120 Predicted haloacid deh 94.4 0.18 3.9E-06 48.1 7.8 114 492-610 84-209 (256)
156 PRK10725 fructose-1-P/6-phosph 94.2 0.11 2.4E-06 49.6 6.5 93 494-607 90-182 (188)
157 TIGR01686 FkbH FkbH-like domai 94.1 0.13 2.8E-06 53.9 7.2 95 492-610 31-129 (320)
158 KOG3040 Predicted sugar phosph 94.0 0.3 6.5E-06 46.1 8.3 51 482-532 13-66 (262)
159 PF13344 Hydrolase_6: Haloacid 93.9 0.084 1.8E-06 44.9 4.3 89 485-605 7-100 (101)
160 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.6 0.54 1.2E-05 47.2 10.4 49 485-533 10-61 (249)
161 TIGR01993 Pyr-5-nucltdase pyri 93.5 0.13 2.9E-06 48.9 5.6 98 492-607 84-181 (184)
162 PF09419 PGP_phosphatase: Mito 93.5 0.31 6.7E-06 45.4 7.6 107 454-604 36-157 (168)
163 PLN02645 phosphoglycolate phos 93.0 0.22 4.7E-06 52.0 6.7 50 483-532 35-87 (311)
164 COG0637 Predicted phosphatase/ 92.8 0.34 7.4E-06 47.7 7.4 100 491-609 85-184 (221)
165 PLN02151 trehalose-phosphatase 92.3 0.94 2E-05 47.5 10.1 62 572-637 269-342 (354)
166 PLN02423 phosphomannomutase 91.2 0.29 6.2E-06 49.1 4.8 40 571-611 188-232 (245)
167 PRK10748 flavin mononucleotide 91.0 0.7 1.5E-05 46.1 7.5 94 492-610 113-207 (238)
168 PHA02597 30.2 hypothetical pro 91.0 0.56 1.2E-05 45.1 6.5 95 492-609 74-172 (197)
169 TIGR01452 PGP_euk phosphoglyco 90.7 1.9 4.1E-05 44.1 10.4 48 485-532 11-61 (279)
170 PF03767 Acid_phosphat_B: HAD 90.1 0.4 8.7E-06 47.4 4.7 88 493-599 116-207 (229)
171 PF08235 LNS2: LNS2 (Lipin/Ned 88.9 2.5 5.5E-05 38.8 8.5 107 491-606 26-141 (157)
172 PLN02177 glycerol-3-phosphate 88.9 1.7 3.8E-05 48.0 8.9 98 493-611 111-215 (497)
173 COG1011 Predicted hydrolase (H 88.7 1.6 3.4E-05 42.9 7.9 121 492-636 99-226 (229)
174 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.8 0.91 2E-05 45.9 4.8 48 485-532 10-64 (257)
175 TIGR01680 Veg_Stor_Prot vegeta 86.5 3.4 7.4E-05 41.5 8.5 31 490-520 143-173 (275)
176 TIGR01493 HAD-SF-IA-v2 Haloaci 85.5 0.96 2.1E-05 42.5 4.0 86 492-603 90-175 (175)
177 TIGR01458 HAD-SF-IIA-hyp3 HAD- 85.4 1.1 2.4E-05 45.2 4.7 118 495-635 123-253 (257)
178 PRK10444 UMP phosphatase; Prov 85.3 0.9 1.9E-05 45.6 3.9 48 484-531 9-59 (248)
179 TIGR01684 viral_ppase viral ph 85.3 1.5 3.1E-05 44.6 5.2 41 493-533 146-187 (301)
180 PTZ00445 p36-lilke protein; Pr 84.2 6 0.00013 38.1 8.5 142 444-606 28-200 (219)
181 TIGR01663 PNK-3'Pase polynucle 84.2 2.8 6E-05 46.7 7.3 40 493-532 198-249 (526)
182 TIGR02244 HAD-IG-Ncltidse HAD 83.8 5 0.00011 42.1 8.6 107 494-606 186-318 (343)
183 TIGR01689 EcbF-BcbF capsule bi 83.4 1.3 2.7E-05 39.3 3.5 31 491-521 23-53 (126)
184 COG0241 HisB Histidinol phosph 82.5 8.1 0.00017 36.5 8.6 25 493-517 32-56 (181)
185 PF05822 UMPH-1: Pyrimidine 5' 82.3 6 0.00013 39.2 8.0 133 492-636 90-241 (246)
186 COG0647 NagD Predicted sugar p 81.5 12 0.00027 37.8 10.1 109 483-627 15-129 (269)
187 TIGR01517 ATPase-IIB_Ca plasma 80.5 13 0.00027 45.2 11.7 200 99-305 134-358 (941)
188 PHA03398 viral phosphatase sup 79.7 3.2 6.9E-05 42.3 5.2 41 493-533 148-189 (303)
189 TIGR02251 HIF-SF_euk Dullard-l 78.6 1.6 3.4E-05 40.7 2.6 96 492-609 42-137 (162)
190 TIGR01460 HAD-SF-IIA Haloacid 77.3 20 0.00043 35.6 10.2 48 485-532 7-58 (236)
191 PF13242 Hydrolase_like: HAD-h 76.5 3.2 7E-05 32.8 3.5 56 570-625 7-70 (75)
192 COG3700 AphA Acid phosphatase 72.4 4.5 9.7E-05 37.4 3.6 89 493-608 115-209 (237)
193 TIGR01459 HAD-SF-IIA-hyp4 HAD- 69.6 5 0.00011 40.0 3.8 92 494-607 140-237 (242)
194 COG1877 OtsB Trehalose-6-phosp 69.5 25 0.00055 35.5 8.7 68 452-530 11-79 (266)
195 TIGR01452 PGP_euk phosphoglyco 69.2 32 0.0007 35.0 9.7 95 494-609 145-245 (279)
196 KOG0210 P-type ATPase [Inorgan 67.1 31 0.00067 39.0 9.2 104 57-162 94-204 (1051)
197 KOG2914 Predicted haloacid-hal 63.7 25 0.00054 34.5 7.1 116 493-625 93-213 (222)
198 KOG3085 Predicted hydrolase (H 62.7 16 0.00035 36.0 5.7 104 495-618 116-221 (237)
199 TIGR01524 ATPase-IIIB_Mg magne 61.6 1.8E+02 0.0039 35.1 15.3 197 101-303 96-316 (867)
200 COG2503 Predicted secreted aci 61.1 38 0.00082 33.3 7.6 86 493-603 123-212 (274)
201 COG0474 MgtA Cation transport 60.1 1E+02 0.0022 37.4 12.9 208 96-305 105-330 (917)
202 TIGR01494 ATPase_P-type ATPase 59.4 10 0.00023 42.3 4.3 148 140-305 53-212 (499)
203 TIGR01647 ATPase-IIIA_H plasma 59.4 1.9E+02 0.0041 34.2 14.8 188 109-305 70-268 (755)
204 PRK14194 bifunctional 5,10-met 58.4 42 0.0009 34.6 7.9 45 489-533 12-65 (301)
205 TIGR01456 CECR5 HAD-superfamil 57.9 49 0.0011 34.6 8.7 50 483-532 7-64 (321)
206 PRK15122 magnesium-transportin 57.0 1.7E+02 0.0037 35.4 14.0 158 141-305 174-351 (903)
207 PF00389 2-Hacid_dh: D-isomer 56.9 1.4E+02 0.003 26.3 11.2 36 574-610 52-89 (133)
208 PF12689 Acid_PPase: Acid Phos 56.9 20 0.00043 33.6 4.9 92 493-602 46-142 (169)
209 PRK10517 magnesium-transportin 54.3 2.7E+02 0.0059 33.7 15.1 159 141-303 185-351 (902)
210 PLN02423 phosphomannomutase 53.3 19 0.0004 36.0 4.5 37 485-522 16-53 (245)
211 CHL00200 trpA tryptophan synth 53.0 74 0.0016 32.1 8.7 90 490-601 126-218 (263)
212 PRK11507 ribosome-associated p 50.5 21 0.00047 27.8 3.3 26 137-162 38-63 (70)
213 PRK05585 yajC preprotein trans 50.1 1.2E+02 0.0026 26.0 8.1 43 97-139 18-60 (106)
214 COG4229 Predicted enolase-phos 48.1 44 0.00096 31.3 5.5 94 490-607 101-200 (229)
215 TIGR01522 ATPase-IIA2_Ca golgi 47.8 2.1E+02 0.0046 34.5 13.0 198 103-305 90-306 (884)
216 TIGR01106 ATPase-IIC_X-K sodiu 46.3 3.2E+02 0.007 33.5 14.3 200 100-303 110-324 (997)
217 PF13275 S4_2: S4 domain; PDB: 45.7 13 0.00028 28.6 1.5 26 138-164 35-60 (65)
218 PF12710 HAD: haloacid dehalog 45.1 12 0.00026 35.4 1.6 16 330-345 1-16 (192)
219 PLN02645 phosphoglycolate phos 44.4 52 0.0011 34.2 6.3 61 574-636 237-307 (311)
220 PF03120 DNA_ligase_OB: NAD-de 44.4 12 0.00026 30.3 1.2 23 147-169 45-68 (82)
221 COG0279 GmhA Phosphoheptose is 44.1 65 0.0014 29.8 5.9 61 441-525 93-153 (176)
222 PF02358 Trehalose_PPase: Treh 43.7 22 0.00047 35.2 3.2 56 571-626 164-233 (235)
223 PF11694 DUF3290: Protein of u 43.4 1.3E+02 0.0028 27.5 7.9 20 143-162 97-116 (149)
224 TIGR00739 yajC preprotein tran 42.0 1.8E+02 0.0039 23.6 7.7 23 117-139 23-45 (84)
225 PF15584 Imm44: Immunity prote 41.3 12 0.00026 30.6 0.8 19 154-172 13-31 (94)
226 TIGR02250 FCP1_euk FCP1-like p 40.6 51 0.0011 30.4 4.9 41 492-533 58-98 (156)
227 PF13380 CoA_binding_2: CoA bi 38.8 41 0.0009 29.2 3.8 40 493-532 64-104 (116)
228 cd02071 MM_CoA_mut_B12_BD meth 38.6 31 0.00068 30.2 3.1 80 452-532 21-104 (122)
229 COG1188 Ribosome-associated he 37.0 83 0.0018 26.5 5.0 30 136-166 34-63 (100)
230 COG5547 Small integral membran 36.8 1.7E+02 0.0036 21.8 5.8 48 65-120 3-52 (62)
231 PRK14174 bifunctional 5,10-met 36.3 1.7E+02 0.0036 30.2 8.3 45 489-533 9-63 (295)
232 PF06506 PrpR_N: Propionate ca 35.9 1.5E+02 0.0032 27.8 7.4 107 496-648 65-172 (176)
233 cd02433 Nodulin-21_like_2 Nodu 34.6 1.5E+02 0.0033 29.3 7.5 37 13-51 87-126 (234)
234 PF01455 HupF_HypC: HupF/HypC 34.6 93 0.002 24.2 4.7 31 134-164 17-50 (68)
235 PF12368 DUF3650: Protein of u 34.4 34 0.00075 21.4 1.8 15 34-48 13-27 (28)
236 PRK14179 bifunctional 5,10-met 33.7 1.4E+02 0.0029 30.6 7.1 62 565-626 137-208 (284)
237 cd02067 B12-binding B12 bindin 33.6 42 0.00091 29.0 3.1 80 452-532 21-104 (119)
238 cd05014 SIS_Kpsf KpsF-like pro 32.6 3.2E+02 0.007 23.5 9.0 28 493-520 59-86 (128)
239 KOG2882 p-Nitrophenyl phosphat 32.1 76 0.0016 32.4 4.8 49 484-532 30-81 (306)
240 PF11019 DUF2608: Protein of u 31.8 1.4E+02 0.003 30.0 6.8 105 493-602 82-196 (252)
241 PRK15108 biotin synthase; Prov 31.6 5.7E+02 0.012 27.0 11.7 118 444-598 78-201 (345)
242 PF14336 DUF4392: Domain of un 31.0 1.1E+02 0.0024 31.4 6.1 38 495-532 63-101 (291)
243 PLN02591 tryptophan synthase 30.9 2.3E+02 0.0051 28.3 8.2 96 494-611 117-219 (250)
244 PRK10444 UMP phosphatase; Prov 30.0 1.1E+02 0.0024 30.5 5.8 58 568-625 175-240 (248)
245 PF06941 NT5C: 5' nucleotidase 29.6 41 0.00088 32.0 2.5 28 492-519 73-100 (191)
246 cd05017 SIS_PGI_PMI_1 The memb 29.5 88 0.0019 27.0 4.4 37 493-531 55-91 (119)
247 cd00860 ThrRS_anticodon ThrRS 29.2 1.2E+02 0.0026 24.3 5.0 46 487-532 7-53 (91)
248 PF00122 E1-E2_ATPase: E1-E2 A 28.5 5.5E+02 0.012 24.8 13.1 62 106-176 2-63 (230)
249 smart00306 HintN Hint (Hedgeho 27.8 65 0.0014 26.5 3.2 27 135-161 73-99 (100)
250 PRK14178 bifunctional 5,10-met 27.8 3.1E+02 0.0067 28.0 8.4 63 564-626 130-202 (279)
251 PF05240 APOBEC_C: APOBEC-like 27.6 62 0.0013 24.0 2.5 25 495-519 2-26 (55)
252 PRK14167 bifunctional 5,10-met 27.6 1.3E+02 0.0029 30.9 5.9 45 489-533 10-63 (297)
253 PF09926 DUF2158: Uncharacteri 27.1 42 0.00092 24.6 1.6 12 153-164 2-13 (53)
254 PRK14169 bifunctional 5,10-met 27.0 1.4E+02 0.003 30.5 5.8 44 490-533 10-62 (282)
255 COG4996 Predicted phosphatase 26.3 1.4E+02 0.003 26.6 4.8 56 477-532 20-81 (164)
256 PRK14175 bifunctional 5,10-met 25.9 1.4E+02 0.003 30.5 5.7 45 489-533 11-64 (286)
257 TIGR00739 yajC preprotein tran 25.6 1.7E+02 0.0036 23.9 5.0 14 150-163 36-49 (84)
258 PRK14170 bifunctional 5,10-met 25.5 1.7E+02 0.0037 29.9 6.2 45 489-533 10-63 (284)
259 PRK10671 copA copper exporting 25.3 6.9E+02 0.015 30.0 12.3 75 104-188 290-365 (834)
260 PLN03064 alpha,alpha-trehalose 25.3 1.7E+02 0.0037 35.3 7.0 70 448-530 580-661 (934)
261 COG0078 ArgF Ornithine carbamo 25.3 6.2E+02 0.014 26.1 9.9 34 495-532 90-123 (310)
262 PRK05886 yajC preprotein trans 24.2 2.2E+02 0.0049 24.4 5.7 23 118-140 25-47 (109)
263 PRK05886 yajC preprotein trans 24.1 4.6E+02 0.01 22.5 8.1 14 150-163 37-50 (109)
264 PRK04980 hypothetical protein; 24.1 91 0.002 26.4 3.2 57 133-194 18-81 (102)
265 PF08645 PNK3P: Polynucleotide 24.1 60 0.0013 30.0 2.5 23 494-516 31-53 (159)
266 cd05008 SIS_GlmS_GlmD_1 SIS (S 23.5 75 0.0016 27.5 2.9 28 493-520 58-85 (126)
267 TIGR00216 ispH_lytB (E)-4-hydr 23.0 8.2E+02 0.018 25.0 10.5 27 444-470 99-125 (280)
268 PRK14184 bifunctional 5,10-met 23.0 1.8E+02 0.0038 29.8 5.7 44 490-533 10-63 (286)
269 COG1778 Low specificity phosph 22.9 52 0.0011 30.2 1.7 27 321-347 2-28 (170)
270 PRK14193 bifunctional 5,10-met 22.9 1.9E+02 0.0041 29.5 5.9 45 489-533 11-64 (284)
271 cd00210 PTS_IIA_glc PTS_IIA, P 22.5 98 0.0021 27.3 3.3 55 154-208 25-100 (124)
272 PRK13938 phosphoheptose isomer 22.3 1.6E+02 0.0034 28.4 5.0 55 442-520 98-152 (196)
273 PRK14191 bifunctional 5,10-met 22.2 1.8E+02 0.0038 29.8 5.6 44 490-533 10-63 (285)
274 PRK14190 bifunctional 5,10-met 22.2 1.7E+02 0.0037 29.9 5.5 45 489-533 11-64 (284)
275 COG2501 S4-like RNA binding pr 22.1 1.1E+02 0.0023 24.2 3.0 27 136-162 37-63 (73)
276 PF06738 DUF1212: Protein of u 21.9 6.7E+02 0.015 23.6 9.4 26 23-50 70-95 (193)
277 PRK14182 bifunctional 5,10-met 21.8 1.9E+02 0.0042 29.5 5.7 45 489-533 9-62 (282)
278 TIGR02329 propionate_PrpR prop 20.6 9.9E+02 0.022 26.9 11.6 103 496-645 85-188 (526)
279 PRK15424 propionate catabolism 20.6 9.8E+02 0.021 27.0 11.5 70 496-595 95-165 (538)
280 PRK14166 bifunctional 5,10-met 20.5 2.3E+02 0.0049 29.0 5.9 44 490-533 10-62 (282)
281 cd05710 SIS_1 A subgroup of th 20.5 89 0.0019 27.1 2.7 29 493-521 59-87 (120)
282 PRK10886 DnaA initiator-associ 20.3 3.1E+02 0.0067 26.3 6.6 55 443-521 95-149 (196)
283 PRK14186 bifunctional 5,10-met 20.3 2.1E+02 0.0045 29.5 5.6 45 489-533 10-64 (297)
284 TIGR02370 pyl_corrinoid methyl 20.3 1.9E+02 0.004 27.8 5.1 78 452-532 106-188 (197)
285 PRK01122 potassium-transportin 20.1 1.1E+03 0.025 27.4 12.1 84 442-531 445-530 (679)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-115 Score=927.37 Aligned_cols=643 Identities=32% Similarity=0.492 Sum_probs=550.8
Q ss_pred cccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005870 17 DLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 94 (672)
+.|..+.+|+.+.|.++ .+|||.+|+.+|+++||.|+++... .+.|..+++||.+|+..+|++++++|+.+.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 56788999999999999 7899999999999999999999866 566778999999999999999999999996
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe
Q 005870 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (672)
Q Consensus 95 ~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~ 174 (672)
.|.+.+.|.++++++..+.++|||++++++++|+++.|+.++|+|+|+.+.+++.+|||||||.|+-||+||||.+|++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 6778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEeccCcCCCCcccccCC--------------CCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCCh
Q 005870 175 GDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGH 239 (672)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~ 239 (672)
..++.||||+|||||.|+.|.. .|++|+||.+..|.++++|+.||.+|.+|++.+.++.. ++++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999953 35799999999999999999999999999999888877 66899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--Hhhc---c-C---ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhh
Q 005870 240 FQKVLTAIGNFCICSIAVGMIVEIIV--MYPI---Q-D---REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (672)
Q Consensus 240 ~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~ 310 (672)
+|+.++.+++.+.-++.++.+..++. .|+. . + ..+...+..++++.++++|++||+.++++++.+.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988663332222222222 2221 1 2 334455667788999999999999999999999999999
Q ss_pred CCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecc-----------cCCC------------------hH-
Q 005870 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-----------KGVD------------------AD- 360 (672)
Q Consensus 311 ~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------~~~~------------------~~- 360 (672)
++++||...++|+||.+++||+|||||||+|+|.+.++++.... .+++ .+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999876542110 0000 11
Q ss_pred --HHHHHHHHcccc------c-----ccchHHHHHHhhcC-----ChH---H-----------HhcccceEEEecCCCCC
Q 005870 361 --TVVLMAAQASRT------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARAGIQEVHFLPFNPTD 408 (672)
Q Consensus 361 --~~~~~~~~~~~~------~-----~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~~f~~~~ 408 (672)
+++..++.++.. . .+.|.+.|+.-... +.. . ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 223333333311 1 34677888764431 100 0 11223555889999999
Q ss_pred ceEEEEEEeCCCe--EEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCC---
Q 005870 409 KRTALTYIDNAGK--MHRVSKGAPEQILNLAHN------------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPE--- 471 (672)
Q Consensus 409 ~~~~v~~~~~~~~--~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~--- 471 (672)
|+|++.+.++.++ +..|+|||+|.++++|+. +...++.+.+...+|+++|+|||++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999866554 788999999999999964 12457889999999999999999999997663
Q ss_pred --------CCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--CCCccc
Q 005870 472 --------GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSAL 541 (672)
Q Consensus 472 --------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~~~~~~ 541 (672)
..+...|.+|+|+|++++.||+|++++++|+.|+++||+|+|+|||+..||.+||+++|+.... .....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 1245678999999999999999999999999999999999999999999999999999997643 345788
Q ss_pred ccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhcc
Q 005870 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 620 (672)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~a 620 (672)
+|.+++ .++..+.+....+..+|+|++|.+|.++|+.||+.|+.|+|+|||.||+||||.||+||||| +|++.+|+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 888887 47788888888999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 005870 621 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLD 667 (672)
Q Consensus 621 d~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 667 (672)
|+|+.||||++|..|+++||.+|.|||+|+.|+++.|+..+++.+++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~ 761 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLT 761 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987666543
No 2
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=2e-112 Score=974.66 Aligned_cols=612 Identities=61% Similarity=0.965 Sum_probs=545.1
Q ss_pred CCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 005870 36 GLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISF 115 (672)
Q Consensus 36 GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~ 115 (672)
|||++|+++|+++||+|+++.+++++|..|+++|++|+.|+++++++++++++ .|.+++.++++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888889999999999999999999999874 78899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccC
Q 005870 116 IEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (672)
Q Consensus 116 ~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~ 195 (672)
++++++++++++|.++.+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999987799999999999999999
Q ss_pred CCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Q 005870 196 PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREY 274 (672)
Q Consensus 196 ~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (672)
+|+.+|+||.+.+|+++++|++||.+|.+|++.+++++++ +++++++.+++++.+++++.++.+++.+++++...+.+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998874 667999999999988766554444444444443245677
Q ss_pred cchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecc
Q 005870 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT 354 (672)
Q Consensus 275 ~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 354 (672)
..++...+++++++|||+||++++++++.++++|+++|+++|+++++|+||.+|++|||||||||+|+|++.+++ ...
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~--~~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL--PFF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE--ecC
Confidence 788889999999999999999999999999999999999999999999999999999999999999999998754 222
Q ss_pred cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEEEEeC-CCeEEEEEcCcHHHH
Q 005870 355 KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQI 433 (672)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~-~~~~~~~~KGa~e~i 433 (672)
.+.+.++++.+++.+++..+.||++.|++.+..+....+..++.++.+||++.+++|++.+... +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2356677777777666566679999999987665444455678889999999999999888755 377888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEE
Q 005870 434 LNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (672)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~ 513 (672)
++.|+...+.++++.+.+++++.+|+|++++||++ .|.+|+|+|+++|+||+||+++++|++|+++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888899999999999999999973 2578999999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCCCc-ccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECC
Q 005870 514 ITGDQLAIGKETGRRLGMGTNMYPSS-ALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (672)
Q Consensus 514 ~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGD 592 (672)
+|||++.+|.++|+++||..+..... ...+.+. +.++..++.+.+++.++|+|++|+||.++|+.||++|+.|+|+||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 99999999999999999975322111 1222222 245566788899999999999999999999999999999999999
Q ss_pred CccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005870 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 593 g~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|.||+|||++||||||||+|+|.+|++||+|++++++..+++++++||++|+||++|+.|.++.|+..++.++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~ 615 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFG 615 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998755443
No 3
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=9.9e-112 Score=979.63 Aligned_cols=634 Identities=31% Similarity=0.469 Sum_probs=556.6
Q ss_pred cccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccch-HHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005870 17 DLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 95 (672)
..+..+.+++++.|+++.+|||++|+++|+++||+|+++.++++ +|..|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 45778999999999999999999999999999999999988765 6678999999999999999999999874
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC------CeEEEEeCCCCCCCcEEEEcCCCeeccc
Q 005870 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGDIIPAD 169 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiI~l~~G~~iPaD 169 (672)
.|.+++.|+++++++.++++++++++++++++|.++.+++++|+|| |++++|++++|+|||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 7888899999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred EEEEecCCeEEeccCcCCCCcccccCCCC-------------cceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005870 170 ARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
|+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|++.+++.++ .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988899999999999999998874 799999999999999999999999999999998876 6
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005870 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.+++++++++.+.++.+.+.+++.+ +...+|..++...+++++++|||+||++++++++.++.+|+++|+++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~-~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLING-YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 67999999999988765444333333333222 23346777888889999999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--HH
Q 005870 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--KE 391 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~ 391 (672)
|+++++|+||++|++|||||||||+|+|++.+.. . ..+.+.++++..++..+.. ...||+|.|++.+.... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999997642 1 1233455666665554332 24689999998875432 12
Q ss_pred HhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeE
Q 005870 392 ARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLRS 461 (672)
Q Consensus 392 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r~ 461 (672)
....++.++.+||++.+++|++++...++..+.++||+||.++++|+.. ++..+.+.+..++++++|+||
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 3346788899999999999998887667778899999999999999741 234566777889999999999
Q ss_pred EEEEeeecCCCCCC---CCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC
Q 005870 462 LAVAYQEVPEGRKD---SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 538 (672)
Q Consensus 462 l~~a~~~l~~~~~~---~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~ 538 (672)
+++||++++..+.+ ..|.+++|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.++|+++||. ..
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD----AG 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----cc
Confidence 99999987643321 236789999999999999999999999999999999999999999999999999995 24
Q ss_pred cccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhh
Q 005870 539 SALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (672)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~ 618 (672)
.++.|.+++ .++++++.+.+++..+|+|++|+||.++|+.||++|++|+|+|||.||+|||++||||||||+|+|.||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 577887776 4677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 619 ~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
+||+|++++++..|++++++||++|+||+|++.|.++.|+..++.+++
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~ 719 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLV 719 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999988666654
No 4
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-114 Score=891.66 Aligned_cols=657 Identities=87% Similarity=1.280 Sum_probs=637.0
Q ss_pred HHHhhcccccccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005870 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (672)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 87 (672)
.++.++|-.|...++.++++++|++.++|||++|+++|+++||.|++..++.+.+++|+.+||+|+.|++..++++++.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78888888889999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeec
Q 005870 88 ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIP 167 (672)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iP 167 (672)
.++.+.+++|.+++.|.+++++++.+++++|+++.+...+|++.+.++++|+|||+|.+++.++||||||+.++.|++||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHH
Q 005870 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247 (672)
Q Consensus 168 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (672)
||++|++|+-|.||+|.|||||.|+.|++|+.+|+||+|++|++.++|++||.+|..|+..+++..+.+..+|++.++.|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCc
Q 005870 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (672)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v 327 (672)
++++++.+++.+++.+.+.|+.+.+.+...+.+.+.+++..+|.++|.++++..++++.||+++|.++|..+++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999888888888888888888888888888889999999999999999999999999999999999999999
Q ss_pred cEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCC
Q 005870 328 DVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPT 407 (672)
Q Consensus 328 ~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~ 407 (672)
|++|+|||||||.|++.+.+..++.+.++.+++++++.++.+++.++.|.+|.|+++++.+|++.+.+++.++++||+|.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888888899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEe
Q 005870 408 DKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487 (672)
Q Consensus 408 ~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i 487 (672)
.||....+.+++|+++..+||+|+.|++.|+.+.+.++..++.+++|+++|+|.+++|++..++...+....+++|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005870 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 488 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
-+-||+|.++.++|++....|++|.|+|||....++..++++|+..+.++...+.|...++.+...+.++++++.+-|+.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHH
Q 005870 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~ 647 (672)
+.|+||..+|+.||.+++.++|+|||.||+|+||.||+|||+.++++.++.++|+|++.+.++.+..++..+|.+|++++
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHH
Q 005870 648 NYTIYAVSITIRIVVSG 664 (672)
Q Consensus 648 ~~i~~~~~~n~~~~~~~ 664 (672)
.+..|+++..+.+++.+
T Consensus 648 nytiyavsitiriv~gf 664 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGF 664 (942)
T ss_pred hheeeeehhHHHHHHHH
Confidence 99999998887765443
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=3.3e-111 Score=976.96 Aligned_cols=640 Identities=30% Similarity=0.472 Sum_probs=554.8
Q ss_pred cccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----C
Q 005870 17 DLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANG----G 91 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~ 91 (672)
..|..+++++++.|+++.+|||++|+++|+++||+|+++.++ +++|..|+++|++|+.|+++++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 578899999999999999999999999999999999999876 55778899999999999999999999987532 1
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC------CeEEEEeCCCCCCCcEEEEcCCCe
Q 005870 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGDI 165 (672)
Q Consensus 92 ~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiI~l~~G~~ 165 (672)
+....|.+++.|+++++++.+++++++++++++.++|+++.+++++|+|| |++++|++++|+|||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 22347888999999999999999999999999999999999999999999 489999999999999999999999
Q ss_pred ecccEEEEecCCeEEeccCcCCCCcccccCC-----------------------CCcceeceeeeeCceEEEEEEecccc
Q 005870 166 IPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDGVYSGSTCKQGEIEAVVIATGVHT 222 (672)
Q Consensus 166 iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~-----------------------~~~v~aGt~v~~g~~~~~V~~tG~~T 222 (672)
|||||+|++|+++.||||+|||||.|+.|.+ +|.+|+||.+.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999888899999999999999975 36899999999999999999999999
Q ss_pred cchhhhhhhcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHH
Q 005870 223 FFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (672)
Q Consensus 223 ~~g~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~ 302 (672)
++|++.+++.+.+.++++++.++++.+++..+..+++.+.+++.+ ....+|..++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~-~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING-FTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 999999998776667889998888877654332222222222211 2334677788888999999999999999999999
Q ss_pred HHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHccc--ccccchHHH
Q 005870 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR--TENQDAIDA 380 (672)
Q Consensus 303 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 380 (672)
.++.+|+++|+++|++.++|+||++|+||||||||||+|+|++.+.+ . ..+.+.++++.+++..+. ...+||++.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~-~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--D-VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--c-CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 99999999999999999999999999999999999999999998743 1 123334556665544322 224689999
Q ss_pred HHHhhcCChH--HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHHH
Q 005870 381 AIVGMLADPK--EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN----------KSDIERRVH 448 (672)
Q Consensus 381 ai~~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~ 448 (672)
|++.+..... .....++.++.+||++.+++|++++...+|+++.++||+||.++++|+. +.+.++.+.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 9998764321 1234578889999999999999988766788899999999999999963 123456677
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCC-----CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH
Q 005870 449 AVIDKFAERGLRSLAVAYQEVPEGRK-----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 523 (672)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~l~~~~~-----~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~ 523 (672)
+..+.++++|+|++++||++++..+. +..|.+++|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 88899999999999999998765431 2357889999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhC
Q 005870 524 ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 524 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 603 (672)
++|+++||.. ..++.|.+++ .+++.++.+.+++.++|+|++|+||.++|+.||++|++|+|+|||.||+|||++|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 3567787776 4677788899999999999999999999999999999999999999999999999
Q ss_pred CeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005870 604 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 604 ~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|||||||+|+|.||++||+|+++++|+.|++++++||++|+||+|++.|.++.|+..++.++
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~ 718 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVL 718 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987755543
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-112 Score=989.36 Aligned_cols=645 Identities=35% Similarity=0.541 Sum_probs=565.4
Q ss_pred cccccCCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 005870 15 TVDLENIPIE--EVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANG 90 (672)
Q Consensus 15 ~~~~~~~~~~--~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 90 (672)
...||..+.+ ++...+.++ ..||+++|+.+|++.||.|+++..+ .+.|..|+.+|++|+.++++++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 3468888888 999999887 7899999999999999999999655 577889999999999999999999999885
Q ss_pred CCCCCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 005870 91 GGKPPDW----QDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (672)
Q Consensus 91 ~~~~~~~----~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~i 166 (672)
.| .++..|+++++++.++.++|++++++++++++++.+++++|+|||++++|+++||||||||.|++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 44 455678888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEecCCeEEeccCcCCCCcccccCC--------------CCcceeceeeeeCceEEEEEEecccccchhhhhhhc
Q 005870 167 PADARLLEGDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 232 (672)
Q Consensus 167 PaD~~ll~g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 232 (672)
|||++|+++++++||||+|||||.|+.|.+ .|++|+||.+.+|.+.++|++||++|+.|++.+++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999998999999999999999963 478999999999999999999999999999999998
Q ss_pred cc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhC
Q 005870 233 TT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 311 (672)
Q Consensus 233 ~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~ 311 (672)
.. ...+++++.+++++.+++.+.++..++.+++.++.....|...+..+++++++++|++||+.++++++.++.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 78899999999999887655554444444444333233478889999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCC------h---HHHHHHHHHccc--cc------c
Q 005870 312 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD------A---DTVVLMAAQASR--TE------N 374 (672)
Q Consensus 312 ~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~---~~~~~~~~~~~~--~~------~ 374 (672)
++++|+++++|+||++++||||||||||+|+|+|.+++...-..+.+ . ..++..++.++. .. .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999977542011122 1 113333333332 12 4
Q ss_pred cchHHHHHHhhcCC------hHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC-------Ch
Q 005870 375 QDAIDAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN-------KS 441 (672)
Q Consensus 375 ~~~~~~ai~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~-------~~ 441 (672)
+||.|.|++.+..+ ....+..+++++.+||+|.+|||+++++..+++++.++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 68999999987643 333445567899999999999999999877777999999999999999974 34
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC----CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCC
Q 005870 442 DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD 517 (672)
Q Consensus 442 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~----~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd 517 (672)
+.++.+.+..++|+++|+||+++|||.++..+. +..|++|+|+|+++|+||+|++++++|+.|+++||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 667889999999999999999999998766544 5789999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCH
Q 005870 518 QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDA 597 (672)
Q Consensus 518 ~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~ 597 (672)
++.||.++|+++|+..+.....++.|.+++. +.+.++.+.++++.||||++|+||.++|+.||++|+.|+|+|||.||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 9999999999999876533345778888773 555688888899999999999999999999999999999999999999
Q ss_pred HHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 005870 598 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLD 667 (672)
Q Consensus 598 ~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 667 (672)
||||+|||||||| +|+|++|++||+++.++++..+..++++||++|.|+++++.|.+++|+..++.++++
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~ 722 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY 722 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 799999999999999999999999999999999999999999999999975555443
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3.3e-111 Score=987.09 Aligned_cols=641 Identities=29% Similarity=0.433 Sum_probs=545.4
Q ss_pred cccccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 005870 15 TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGG 92 (672)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 92 (672)
-.+||..+++++.+.|+++ .+|||++|+++|+++||.|+++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3489999999999999998 6899999999999999999999876 567789999999999999999999999874
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEE
Q 005870 93 KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARL 172 (672)
Q Consensus 93 ~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~l 172 (672)
+|.+++.|+++++++.++.++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEeccCcCCCCcccccCCC---------------CcceeceeeeeCceEEEEEEecccccchhhhhhhcccC--
Q 005870 173 LEGDPLKIDQSALTGESLPVTKGPG---------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-- 235 (672)
Q Consensus 173 l~g~~l~Vdes~LTGEs~pv~k~~~---------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-- 235 (672)
++++.|.||||+|||||.|+.|.+. |++|+||.|.+|++.++|++||.+|++|++.+++.+..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999642 57899999999999999999999999999998875421
Q ss_pred ----------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHH
Q 005870 236 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNL 281 (672)
Q Consensus 236 ----------------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (672)
.++|+++.++++++++..+.++++++.++..+ . ..+...+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHHH
Confidence 13889999999988755433333332222211 1 1123455667
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEe---c--c--
Q 005870 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV---F--T-- 354 (672)
Q Consensus 282 ~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~---~--~-- 354 (672)
++++++++|++||++++++++++++||++++++||++.++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 88999999999999999999999999999999999999999999999999999999999999998765421 0 0
Q ss_pred -cCC---------------------------------------C------h---HHHHHHHHHcccc------------c
Q 005870 355 -KGV---------------------------------------D------A---DTVVLMAAQASRT------------E 373 (672)
Q Consensus 355 -~~~---------------------------------------~------~---~~~~~~~~~~~~~------------~ 373 (672)
.++ + . ..++..++.++.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 000 0 0 1233334443311 1
Q ss_pred ccchHHHHHHhhcCChH----------HH-------------------hcccceEEEecCCCCCceEEEEEEeCCC-eEE
Q 005870 374 NQDAIDAAIVGMLADPK----------EA-------------------RAGIQEVHFLPFNPTDKRTALTYIDNAG-KMH 423 (672)
Q Consensus 374 ~~~~~~~ai~~~~~~~~----------~~-------------------~~~~~~~~~~~f~~~~~~~~v~~~~~~~-~~~ 423 (672)
.++|.|.|++.++.... .. +..++.+..+||+|++|||++++...++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 25899999987642110 11 1246789999999999999999876544 578
Q ss_pred EEEcCcHHHHHHhccCC------------hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC------------CCCCCC
Q 005870 424 RVSKGAPEQILNLAHNK------------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR------------KDSPGG 479 (672)
Q Consensus 424 ~~~KGa~e~i~~~~~~~------------~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~------------~~~~e~ 479 (672)
+|+|||||.|+++|+.. ++.++.+.+..++|+++|+||+++|||.++..+ ++..|.
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 99999999999999631 234677888899999999999999999886532 234578
Q ss_pred CeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--------CCcccccccccccCC
Q 005870 480 PWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSALLGQDKDESIA 551 (672)
Q Consensus 480 ~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--------~~~~~~~~~~~~~~~ 551 (672)
+|+|+|+++++||+|++++++|+.|+++||+++|+|||++.+|.++|+++||..+.. ...+++|.+++ .++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-ALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hcC
Confidence 999999999999999999999999999999999999999999999999999964311 23567777665 355
Q ss_pred CccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChh
Q 005870 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (672)
Q Consensus 552 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~ 630 (672)
..++.+..+...+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.|||||||| +|++.++++||+++++++|.
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 66777888888899999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 631 ~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
.|.+++++||++|+|+++++.|.+++|+..++.+++
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999999999988665544
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.6e-110 Score=970.69 Aligned_cols=634 Identities=29% Similarity=0.461 Sum_probs=555.1
Q ss_pred cccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005870 17 DLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 95 (672)
..|..+.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++|++++++++++++.
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 4588999999999999999999999999999999999998775 56778999999999999999999999874
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE------CCeEEEEeCCCCCCCcEEEEcCCCeeccc
Q 005870 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR------DGRWNEQDASILVPGDIISIKLGDIIPAD 169 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r------~g~~~~i~~~~L~~GDiI~l~~G~~iPaD 169 (672)
.|.+++.|+++++++.++++++|++++++.++|+++.+++++|+| ||++++|+++||+|||+|.|++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 788888999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred EEEEecCCeEEeccCcCCCCcccccCCCC-------------cceeceeeeeCceEEEEEEecccccchhhhhhhcccCC
Q 005870 170 ARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ 236 (672)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 236 (672)
|+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+||+.+++.+.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999988899999999999999998864 69999999999999999999999999999999887766
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCccc
Q 005870 237 VGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (672)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk 316 (672)
++++++.++++++++..+.++.+.+.+++ +.+...+|..++..++++++++|||+||++++++++.++.+|+++|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMI-NGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheeh-HHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 78999999999888655444333333322 22233466777888899999999999999999999999999999999999
Q ss_pred chhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--HHH
Q 005870 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--KEA 392 (672)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 392 (672)
++.++|+||++|+||||||||||+|+|++.+.. . ..+.+.++++.+++..+.. ...||++.|++.+.... ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 999999999999999999999999999998742 1 1233455566655543332 23589999998876432 122
Q ss_pred hcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeEE
Q 005870 393 RAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLRSL 462 (672)
Q Consensus 393 ~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r~l 462 (672)
+..++.++.+||+|++|+|++++.+.++..+.++||+||.++++|+.. ++.++++.+.++.++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 346788899999999999999887655667889999999999999642 2345677888899999999999
Q ss_pred EEEeeecCCCCC---CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc
Q 005870 463 AVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 539 (672)
Q Consensus 463 ~~a~~~l~~~~~---~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 539 (672)
++||++++..+. +..|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.++|+++||.. ..
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----ND 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CC
Confidence 999998865432 12477899999999999999999999999999999999999999999999999999963 34
Q ss_pred ccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhc
Q 005870 540 ALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 619 (672)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ 619 (672)
++.|.+++ .++..++.+.+++.++|+|++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+|.||++
T Consensus 559 v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred eeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 67777665 35667788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 620 ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
||+|+++++|+.++.++++||++|+||+|++.|.++.|+..++.+++
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~ 684 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLV 684 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999988665544
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=9.1e-108 Score=961.38 Aligned_cols=650 Identities=25% Similarity=0.389 Sum_probs=549.5
Q ss_pred cccccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-
Q 005870 15 TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGG- 91 (672)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 91 (672)
..+||..+.+++++.|+++ .+|||++|+++|+++||+|+++++++ ++|..|+++|++|++++++++++++++.....
T Consensus 14 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~ 93 (997)
T TIGR01106 14 EMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQA 93 (997)
T ss_pred cCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 4579999999999999998 67999999999999999999988664 46778999999999999999999987753211
Q ss_pred -----CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 005870 92 -----GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (672)
Q Consensus 92 -----~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~i 166 (672)
.....|++++++++++++++++++++++++++.++++++..+++++|+|||++++|++++|+|||+|.|++||+|
T Consensus 94 ~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 94 STEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEE
Confidence 122468888888899999999999999999999999998889999999999999999999999999999999999
Q ss_pred cccEEEEecCCeEEeccCcCCCCcccccCCCC----------cceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005870 167 PADARLLEGDPLKIDQSALTGESLPVTKGPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 167 PaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
||||++++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++.+. .
T Consensus 174 PaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 174 PADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 99999999987799999999999999998864 699999999999999999999999999999988765 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005870 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.++++.+++..+.++..++.+++ +...+..|...+..++++++++|||+||++++++++.++.+|+++|+++
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilv 332 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 332 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEe
Confidence 678999999998887654443333332222 2233456667777888899999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEec--c-c--------CCCh-----HHHHHHHHHcccc-------
Q 005870 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF--T-K--------GVDA-----DTVVLMAAQASRT------- 372 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--~-~--------~~~~-----~~~~~~~~~~~~~------- 372 (672)
|+++++|+||++++||||||||||+|+|+|.++++... . . ..+. +.++..++.++..
T Consensus 333 k~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~ 412 (997)
T TIGR01106 333 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQE 412 (997)
T ss_pred cCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccC
Confidence 99999999999999999999999999999988654210 0 0 0111 1344444444211
Q ss_pred --------cccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeC---CCeEEEEEcCcHHHHHHhc
Q 005870 373 --------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRVSKGAPEQILNLA 437 (672)
Q Consensus 373 --------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~~~~~~~~KGa~e~i~~~~ 437 (672)
..++|.|.|++.++. +....+..++.++.+||+|++|||++++... ++++++++|||||.|+++|
T Consensus 413 ~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 125789999988753 2334456788899999999999998877532 2467899999999999999
Q ss_pred cC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC--------C---CCCCCeEEEEEeeccCCCCcc
Q 005870 438 HN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK--------D---SPGGPWQFMGLMPLFDPPRHD 496 (672)
Q Consensus 438 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~--------~---~~e~~l~~lG~i~~~d~~r~~ 496 (672)
+. +++.++.+.+..++|+++|+||+++||+.++.++. + ..|++|+|+|+++++||+|++
T Consensus 493 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 493 SSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred hHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 63 12456778888999999999999999998865321 1 127899999999999999999
Q ss_pred hHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CcccccccccccCCCcc
Q 005870 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLGQDKDESIAALP 554 (672)
Q Consensus 497 ~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~~~~~~~~~~~~ 554 (672)
++++|++|+++||+++|+|||++.+|.++|+++|+..+... ..++.|.+++. +...+
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~e 651 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQ 651 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHH
Confidence 99999999999999999999999999999999999643210 13566666653 45556
Q ss_pred HHHHhhccC--eecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhH
Q 005870 555 IDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 631 (672)
Q Consensus 555 ~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~ 631 (672)
+++.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.+|++||+++++++|+.
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 777777665 99999999999999999999999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 632 IISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 632 i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
+++++++||++|.|+++++.|.++.|+..++..++
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~ 766 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLI 766 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999999999999999988665544
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.3e-107 Score=957.83 Aligned_cols=642 Identities=25% Similarity=0.413 Sum_probs=542.8
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 005870 22 PIEEVFENLRCS-REGLS--SQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (672)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~--~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~ 91 (672)
+.+++++.|+++ .+||| ++|+++|+++||+|+++.+++ ++|..|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999 67999 999999999999999998876 5567889999999999999999999987532 2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccE
Q 005870 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMAR-LAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (672)
Q Consensus 92 ~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~ 170 (672)
++...|++++.++++++++.++.++++++++++.+++++. .+++++|+|||++++|++++|+|||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3334789998888888999999999999999999998764 467899999999999999999999999999999999999
Q ss_pred EEEecCCeEEeccCcCCCCcccccCCCCc--ceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHHH
Q 005870 171 RLLEGDPLKIDQSALTGESLPVTKGPGDG--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (672)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (672)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+||+.+++..+.+++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999667999999999999999998765 9999999999999999999999999999999887766779999999888
Q ss_pred HHHHHHHHHHHHHHHHHH---hhcc---C---------ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCC
Q 005870 249 NFCICSIAVGMIVEIIVM---YPIQ---D---------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (672)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~i 313 (672)
+++..+.++.+++.++++ +... . .++...+..++++++++|||+||++++++++.++.+|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 775433222222212111 1111 1 134556777888999999999999999999999999999999
Q ss_pred cccchhhhhhhcCccEEEeeccccccCCccccccceEEecc---cC----CC--hHHHHHHHHHcc-cc-----------
Q 005870 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT---KG----VD--ADTVVLMAAQAS-RT----------- 372 (672)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---~~----~~--~~~~~~~~~~~~-~~----------- 372 (672)
++|+++++|+||++|+||||||||||+|+|++.+++..... .+ .. ..+++..+..++ ..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999886542210 00 00 112222222221 11
Q ss_pred cccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC--------
Q 005870 373 ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-------- 440 (672)
Q Consensus 373 ~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~-------- 440 (672)
..+||+|.|++.++. +....+..++.++.+||++++++|++++...+++++.++|||||.+++.|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125789999988753 22233445677888999999999999988767778999999999999999641
Q ss_pred --hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEc
Q 005870 441 --SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (672)
Q Consensus 441 --~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~---~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~T 515 (672)
.+.++.+.+.+++|+++|+|++++||+.++.++. +..|++|+|+|+++++||+||+++++|+.|+++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235678888999999999999999999865432 23478999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCcc
Q 005870 516 GDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (672)
Q Consensus 516 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~N 595 (672)
||++.+|.++|+++||..+ +..++.|.+++. +...++.+.+++..+|+|++|+||.++|+.||++|++|+|+|||.|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999743 235677777653 5667788888899999999999999999999999999999999999
Q ss_pred CHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 596 D~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
|+|||++|||||||| +|+|.|+++||+++++++|..+++++++||++|+|+++++.|++++|+..++..++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~ 751 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 751 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999999999999988666554
No 11
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-109 Score=883.41 Aligned_cols=645 Identities=26% Similarity=0.402 Sum_probs=540.1
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCccCcccchHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCC
Q 005870 22 PIEEVFENLRCS-REGLSS--QAAEERLSIFGYNKLEEKKESKFL-KFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPD 96 (672)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~~--~~~~~r~~~~G~N~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 96 (672)
..+++++.|+++ ..|++. ++..+|++.||.|.+++++++.|+ ..|+.+.+.-..++.+++++++.++++. +....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 589999999999 789986 899999999999999998877665 5678888888889999999999988754 44679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005870 97 WQDFVGIITLLVINSTISFIEENNAGNAAAALMARL-APKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 97 ~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
|++++.|++.+++..++..+.+|+.+++.+.|++.. ..+..|+|||+.++|+.-||+||||+.|+.||.+||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 999999988776666677777777777777766432 3468899999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCC--CCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHH
Q 005870 176 DPLKIDQSALTGESLPVTKGP--GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCI 252 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~--~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~ 252 (672)
+.|.+|||++||||.++.|.+ +.++++||++.+|+++++|+++|.+|..|+++.++... ..++++|-++++++...-
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 56899999999999999999999999999999888777 478899988887764421
Q ss_pred ---HHHHHHHHHHHHHHhhccC-----c---cccc--------hhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCC
Q 005870 253 ---CSIAVGMIVEIIVMYPIQD-----R---EYRP--------GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (672)
Q Consensus 253 ---~~~~~~~~~~~~~~~~~~~-----~---~~~~--------~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~i 313 (672)
+.++...++.++..|+... . .+.. .+...+.++++++|+|||+++++++++++++|.+++.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1111111222222332211 1 1111 1122234577899999999999999999999999999
Q ss_pred cccchhhhhhhcCccEEEeeccccccCCccccccceEEecccC--------CChHH--HHHHH-HHcc------------
Q 005870 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG--------VDADT--VVLMA-AQAS------------ 370 (672)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------~~~~~--~~~~~-~~~~------------ 370 (672)
++|+.+++|+||.+++||+|||||||.|+|++.+.++....+. .++.. ++... +..+
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999988665332211 22221 11111 1111
Q ss_pred -cccccchHHHHHHhhc----CChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC------
Q 005870 371 -RTENQDAIDAAIVGML----ADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN------ 439 (672)
Q Consensus 371 -~~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~------ 439 (672)
....++|.+.|++++. .+....|.....++.+||+|.+|+|++++..+++..|.|+|||+|.++..|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 0112478999998774 35556677889999999999999999999877666349999999999999975
Q ss_pred -----ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC-----C---CCCCCCCeEEEEEeeccCCCCcchHHHHHHHHh
Q 005870 440 -----KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG-----R---KDSPGGPWQFMGLMPLFDPPRHDSAETIRRALN 506 (672)
Q Consensus 440 -----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~-----~---~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~ 506 (672)
.++....+++.++.|+.+|+|++|+||++..+. + .+..+.+|+++|+++++||+||++++||+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 234456889999999999999999999985332 1 134578899999999999999999999999999
Q ss_pred CCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCE
Q 005870 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586 (672)
Q Consensus 507 ~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~ 586 (672)
+||.|.|+|||+..||++||.+|||..+..+-.++.|.++. .++++++++++.+..|+||.+|.+|..+|+.|++.|++
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 99999999999999999999999998876666788898887 57888999999999999999999999999999999999
Q ss_pred EEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005870 587 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 587 v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|+++|||.||+|||+.||||.||| .|++.|||+||+|++||||++|+++++|||++|.||+||++|++++|+..++..|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999999877665
Q ss_pred hc
Q 005870 666 LD 667 (672)
Q Consensus 666 ~~ 667 (672)
.+
T Consensus 821 v~ 822 (1034)
T KOG0204|consen 821 VS 822 (1034)
T ss_pred hh
Confidence 54
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.1e-106 Score=944.68 Aligned_cols=631 Identities=30% Similarity=0.479 Sum_probs=546.7
Q ss_pred ccccCCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCccCccc-chHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 005870 16 VDLENIPIEEVFENLRCS-REGLS-SQAAEERLSIFGYNKLEEKK-ESKFLKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (672)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~-~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~ 91 (672)
.+||.+|++++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|..|+++| ++|+.++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 479999999999999999 67999 99999999999999999876 56677899999 8999999999999999874
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEE
Q 005870 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (672)
Q Consensus 92 ~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ 171 (672)
.|.+++.++++++++..+++++++++++++++|+++.+++++|+|||++++|+++||+|||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 7888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEeccCcCCCCcccccCCCC--------------cceeceeeeeCceEEEEEEecccccchhhhhhhccc-CC
Q 005870 172 LLEGDPLKIDQSALTGESLPVTKGPGD--------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQ 236 (672)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~~--------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~ 236 (672)
|++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.++++++ .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999987799999999999999998863 799999999999999999999999999999998876 56
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCccc
Q 005870 237 VGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (672)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk 316 (672)
++++++.++++++++..+.++.+++.+++.|. .+.+|...+...+++++++|||+||++++++++.+.+||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 78999999999987654433333333333332 34567778888899999999999999999999999999999999999
Q ss_pred chhhhhhhcCccEEEeeccccccCCccccccceEEecc----cC--C-----------------C--hHHHHHHHHHccc
Q 005870 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT----KG--V-----------------D--ADTVVLMAAQASR 371 (672)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~----~~--~-----------------~--~~~~~~~~~~~~~ 371 (672)
++.++|+||++|+||||||||||+|+|++.+++..... .. . + ..+++..++.++.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 99999999999999999999999999999876531100 00 0 0 1223334433332
Q ss_pred c--------cccchHHHHHHhhcCCh--HHHhcccceEEEecCCCCCceEEEEEEe-CCCeEEEEEcCcHHHHHHhccCC
Q 005870 372 T--------ENQDAIDAAIVGMLADP--KEARAGIQEVHFLPFNPTDKRTALTYID-NAGKMHRVSKGAPEQILNLAHNK 440 (672)
Q Consensus 372 ~--------~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~~f~~~~~~~~v~~~~-~~~~~~~~~KGa~e~i~~~~~~~ 440 (672)
. ..+||+|.|++.++... ...+..++.++.+||+|.+|||++.+.. .+++++.++||+||.++..|+..
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 1 12479999998875422 2233467889999999999999998775 35678899999999999999631
Q ss_pred -----------hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCC
Q 005870 441 -----------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV 509 (672)
Q Consensus 441 -----------~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi 509 (672)
++.++.+.+..++++++|+|++++||+++ +.+|+|+|+++++||+||+++++|+.|+++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 23456778888999999999999999975 45789999999999999999999999999999
Q ss_pred cEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEE
Q 005870 510 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (672)
Q Consensus 510 ~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~ 589 (672)
+++|+|||++.+|.++|+++|+... ....+.|.+++ .++..++.+.+.+..+|+|++|+||..+|+.+|+.|+.|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999753 23456666665 35667788888999999999999999999999999999999
Q ss_pred ECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005870 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 590 iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
+|||.||+|||++|||||||| +|++.++++||+++++++++.+.+++++||++|+|+++++.|+++.|+..+..++
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~ 699 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIA 699 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999999999999999999999 7999999999999999999999999999999999999999999999998865543
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=6.1e-102 Score=917.95 Aligned_cols=620 Identities=23% Similarity=0.291 Sum_probs=508.7
Q ss_pred CCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005870 34 REGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (672)
Q Consensus 34 ~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~ 113 (672)
..|||++|+++|+++||+|+++.+.++++..|++++++|++++++++++++++. .+|++++.++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998888888999999999988877776555543 3788888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEc--CCCeecccEEEEecCCeEEeccCcCCCCcc
Q 005870 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (672)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~--~G~~iPaD~~ll~g~~l~Vdes~LTGEs~p 191 (672)
..++++++.++++++. ..++.++|+|||+|++|+++||+|||+|.|+ +|++|||||+|++|++ .||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~-~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~~-~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMV-HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSC-IVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhh-cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCcE-EEecccccCCccc
Confidence 9999999988888854 4577899999999999999999999999999 9999999999999985 8999999999999
Q ss_pred cccCCC------------------Ccceeceeeee-------CceEEEEEEecccccchhhhhhhccc-CCCChHHHHHH
Q 005870 192 VTKGPG------------------DGVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLT 245 (672)
Q Consensus 192 v~k~~~------------------~~v~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~ 245 (672)
+.|.+. +++|+||.+.+ |.+.++|++||.+|..|++.+++..+ ...+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 35999999985 78999999999999999999988766 44567777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhc
Q 005870 246 AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (672)
Q Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg 325 (672)
++..+++.+.+++++. +++.+...+.++...+..++.++++++|++||++++++++.+..||+++|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 6655443322222222 122222334567778889999999999999999999999999999999999999999999999
Q ss_pred CccEEEeeccccccCCccccccceEEecccC----------CChHHHHHHHHHccc------ccccchHHHHHHhhcCCh
Q 005870 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----------VDADTVVLMAAQASR------TENQDAIDAAIVGMLADP 389 (672)
Q Consensus 326 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~------~~~~~~~~~ai~~~~~~~ 389 (672)
++|++|||||||||+|+|+|.++........ .....+....+.+.. ...+||+|.|++.+....
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999987543111000 011112222222221 123789999999875311
Q ss_pred HHH-------------------hcccceEEEecCCCCCceEEEEEEeC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHH
Q 005870 390 KEA-------------------RAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHA 449 (672)
Q Consensus 390 ~~~-------------------~~~~~~~~~~~f~~~~~~~~v~~~~~-~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~ 449 (672)
... ...+++++.+||+|++|||+++++.. ++++++++|||||.|+++|+.. +.++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 000 13577889999999999999998864 3567899999999999999853 45788999
Q ss_pred HHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHH
Q 005870 450 VIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (672)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~l~~~--------~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 521 (672)
.+++|+++|+||+++|||++++. +++..|.+|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2345789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------Ccccccccccc--
Q 005870 522 GKETGRRLGMGTNMYP---------------------------------------------------SSALLGQDKDE-- 548 (672)
Q Consensus 522 a~~ia~~~gi~~~~~~---------------------------------------------------~~~~~~~~~~~-- 548 (672)
|.++|+++||..+... ..+++|+.++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 01122222211
Q ss_pred cCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCC
Q 005870 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (672)
Q Consensus 549 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~ 628 (672)
.....++.+++.+..||||++|+||.++|+.||+.|+.|+|||||.||+||||+||||||||++ | |..+||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCc
Confidence 0122346667788899999999999999999999999999999999999999999999999975 3 4479999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 629 ~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
++++..+|++||+++.|+++.+.|.+.+++...+..++
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~ 881 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI 881 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887655543
No 14
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.3e-98 Score=876.35 Aligned_cols=600 Identities=31% Similarity=0.455 Sum_probs=499.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC
Q 005870 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD 141 (672)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~ 141 (672)
++++|++|++++|+++++++++++... .....|.+++.|+++++++..+++++++++++++++|.+..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986432 22347999999999999999999999999999999999888899999999
Q ss_pred CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCC-------------Ccceeceeeee
Q 005870 142 GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DGVYSGSTCKQ 208 (672)
Q Consensus 142 g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~v~~ 208 (672)
|++++|+++||||||+|.|++||.|||||+|++|+.+.||||+|||||.|+.|.++ +.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998789999999999999999875 78999999999
Q ss_pred CceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cc----Ccccc----chh
Q 005870 209 GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYP-IQ----DREYR----PGI 278 (672)
Q Consensus 209 g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~----~~~ 278 (672)
|+++++|++||.+|++||+.+++..+ .+++++++.+++++.++..++++.+++.+++.+. +. ..+|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999888776 5678999999999877654333332222222111 11 11221 123
Q ss_pred hHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEec-----
Q 005870 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF----- 353 (672)
Q Consensus 279 ~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----- 353 (672)
...+++++++||++||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 345678899999999999999999999999999999999999999999999999999999999999987653210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHcccc------------cccchHHHHHHhhcCChH------
Q 005870 354 ------TKGVD-------------------ADTVVLMAAQASRT------------ENQDAIDAAIVGMLADPK------ 390 (672)
Q Consensus 354 ------~~~~~-------------------~~~~~~~~~~~~~~------------~~~~~~~~ai~~~~~~~~------ 390 (672)
..+++ .+.++..++.++.. ..++|.|.|++.+..+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 11233333333321 125899999987642110
Q ss_pred --------------HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC-----------ChHHHH
Q 005870 391 --------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN-----------KSDIER 445 (672)
Q Consensus 391 --------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~-----------~~~~~~ 445 (672)
..+..++.++.+||+|++|||++++.. ++++++|+|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123456789999999999999998875 467889999999999999964 123466
Q ss_pred HHHHHHHHHHH-cCCeEEEEEeeecCCCC----------CCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEE
Q 005870 446 RVHAVIDKFAE-RGLRSLAVAYQEVPEGR----------KDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (672)
Q Consensus 446 ~~~~~~~~~~~-~G~r~l~~a~~~l~~~~----------~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~ 514 (672)
++.+.+++|++ +|+||+++|||.++.++ ++..|++|+|+|+++++||+|++++++|+.|+++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHhCCCCCCC--CCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECC
Q 005870 515 TGDQLAIGKETGRRLGMGTNMY--PSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (672)
Q Consensus 515 TGd~~~~a~~ia~~~gi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGD 592 (672)
|||+..+|.++|+++|+..+.. ....+.|.+++ .+.+.+......+..+|+|++|+||.++|+.+|+.|+.|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~-~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-EMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHh-hCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 9999999999999999975321 12345565554 34445566667778899999999999999999999999999999
Q ss_pred CccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 593 g~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
|.||+|||++||||||||+|++.+|++||+++.+++|+.+.+++++||++|+|+++++.|.+++|+..++..++
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~ 712 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFL 712 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988666554
No 15
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-96 Score=779.77 Aligned_cols=664 Identities=26% Similarity=0.413 Sum_probs=554.0
Q ss_pred ChhHHHHHhhcccc-cccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHH
Q 005870 3 DKEEVLEAVLKETV-DLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEA 79 (672)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (672)
++...++++++|.+ +.|++|.+|+.+++.++ .+|||.+++.+++.+.|+|.+++|+. +.|.+|.+|+++-+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 45678899999955 99999999999999999 89999999999999999999998874 45668999999999999999
Q ss_pred HHHHHHHHhcCC------CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCC
Q 005870 80 AAIMAIALANGG------GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILV 153 (672)
Q Consensus 80 ~~~l~~~~~~~~------~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~ 153 (672)
+++++++.+... .+....+.+..++.++++..+..++|+.+..+.++.+..+.|+.+.|+|||+...+..+|||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 999988764321 11222333444555667888899999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCC----------CCcceeceeeeeCceEEEEEEeccccc
Q 005870 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDGVYSGSTCKQGEIEAVVIATGVHTF 223 (672)
Q Consensus 154 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~----------~~~v~aGt~v~~g~~~~~V~~tG~~T~ 223 (672)
+||++.++-|++||||.+++++.++++|+|+|||||.|..+.+ .|+-|.+|.+++|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 9999999999999999999999999999999999999999976 367899999999999999999999999
Q ss_pred chhhhhhhcc-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHH
Q 005870 224 FGKAAHLVDT-TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (672)
Q Consensus 224 ~g~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~ 302 (672)
+|+++.+... ...++++++.+..+..+.....+ .+.+.++......++.|..++..++.++++.+|.+|+..++.++.
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi-~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAI-FLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHH-HHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999988765 36677888887777655332222 222222222222366777888788889999999999999999999
Q ss_pred HHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccC----------------CChHHHHHHH
Q 005870 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----------------VDADTVVLMA 366 (672)
Q Consensus 303 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------------~~~~~~~~~~ 366 (672)
...+||+++++++||..+.|+||..++||+|||||||+|.|+|.+.+.+..-.. .....+..++
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999988764321100 0112234444
Q ss_pred HHccc---------------ccccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeC---CCeEEE
Q 005870 367 AQASR---------------TENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHR 424 (672)
Q Consensus 367 ~~~~~---------------~~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~~~~~~ 424 (672)
..++. ...+++.+.|+.++.. +....|...+.+..+||+|.+|+.-.+.... +.+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 33332 1235778888887752 3356677888889999999999986655532 356788
Q ss_pred EEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCeEE
Q 005870 425 VSKGAPEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQF 483 (672)
Q Consensus 425 ~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-----------~~~e~~l~~ 483 (672)
..|||||.++++|+. +....+.+++...++...|.||++|+++.+++.++ ...-.+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 899999999999984 23567788888899999999999999999886542 123467899
Q ss_pred EEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC----------------------CCccc
Q 005870 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------------------PSSAL 541 (672)
Q Consensus 484 lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~----------------------~~~~~ 541 (672)
+|++++-||+|..+++|+..|+.+||+|+|+|||++.||+++|++.||..... ...++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 99999999999999999999999999999999999999999999999754211 11234
Q ss_pred ccccccccCCCccHHHHhhccC--eecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhh
Q 005870 542 LGQDKDESIAALPIDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 618 (672)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~ 618 (672)
.|.++. .++.+++++++++.. ||||.||+||..+|+.+|+.|..|+++|||.||+||||.|||||||| .|+|.+|+
T Consensus 662 hG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred eccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 555544 466778888888765 99999999999999999999999999999999999999999999999 89999999
Q ss_pred ccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcc
Q 005870 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLDF 668 (672)
Q Consensus 619 ~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 668 (672)
|||+|++|+||.+|+..+++||.+|+|+||.|.|.++.|++-+.++++.+
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi 790 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI 790 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH
Confidence 99999999999999999999999999999999999999999988776554
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=9.2e-92 Score=777.55 Aligned_cols=542 Identities=24% Similarity=0.353 Sum_probs=438.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCC-ceE
Q 005870 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIITLLVINSTISFIE----ENNAGNAAAALMARLAP-KGK 137 (672)
Q Consensus 67 ~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~--~~~~~ii~~v~i~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~ 137 (672)
.++++|+.|+++++++++++++.... ....| ++.+.|.++++++.++..++ ++|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 56789999999999999998754211 00112 33445555555555554444 78999999999988876 675
Q ss_pred -EEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCC---CcceeceeeeeCceEE
Q 005870 138 -VLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEA 213 (672)
Q Consensus 138 -V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~---~~v~aGt~v~~g~~~~ 213 (672)
|.|||++++|++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|++| +.+|+||.+.+|.+.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7799999999999999999999999999999999999987 8999999999999999999 8899999999999999
Q ss_pred EEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCc
Q 005870 214 VVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIA 292 (672)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 292 (672)
+|+++|.+|++||+.++++.+ .++++++.....+...+.. +++++++ ++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~~-~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVIL-TMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHHH-HHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999887 5678887654444322211 1111111 11111 111123334566677888899999
Q ss_pred chHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccc
Q 005870 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT 372 (672)
Q Consensus 293 L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (672)
||..+++....++.||+|+|+++|+..++|++|++|++|||||||||+|++.+.+.. .. .+.+.++++..+..++.
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~- 339 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI- 339 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999999999999999999887765422 21 23445566666555543
Q ss_pred cccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHHHH
Q 005870 373 ENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVI 451 (672)
Q Consensus 373 ~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~ 451 (672)
.+.||++.|++.+....... ......+.+||++++++|++.+ +++ .+.||+++.++++|.... ..+..+.+..
T Consensus 340 ~s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 340 ADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred CCCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 44589999998875321100 0011234689999999998764 243 456999999999987421 2234566777
Q ss_pred HHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 005870 452 DKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (672)
Q Consensus 452 ~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi 531 (672)
++++++|+|+++++.. ++++|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++|+
T Consensus 414 ~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 8899999999998753 389999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005870 532 GTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
+ ++|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 5 3799999999999999999999999999999999999999999999999
Q ss_pred ccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005870 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 612 ~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|+|.||++||+|++++|+..+.+++++||++|.|+++++.|+++.|+.-++..+
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~ 584 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAIL 584 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998755443
No 17
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.3e-89 Score=761.17 Aligned_cols=536 Identities=25% Similarity=0.332 Sum_probs=444.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ceEE
Q 005870 67 GFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAP-KGKV 138 (672)
Q Consensus 67 ~~~~~~~~~~~~~~~~l~~~~~~~~----~~---~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V 138 (672)
.+|++|+.+++++++++++++.... +. ...|...+.+++.++++.+++.++++|+++++++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 6788999999999999999876321 11 12233334445556777888889999999999999988775 6999
Q ss_pred EECCe-EEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCc---ceeceeeeeCceEEE
Q 005870 139 LRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIEAV 214 (672)
Q Consensus 139 ~r~g~-~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~~~ 214 (672)
+|||+ +++|++++|+|||+|.|++||+|||||+|++|.. .||||+|||||.|+.|++|+. ||+||.+.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 9999999999999999999999999999999985 899999999999999999988 999999999999999
Q ss_pred EEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcc
Q 005870 215 VIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAM 293 (672)
Q Consensus 215 V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L 293 (672)
|+++|.+|.+||+.++++++ .++++++...+.+..++..++++.++..+.+.++ .+.. ..+...+++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999887 5678888777666554433222222222222221 2222 367778899999999999
Q ss_pred hHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHccccc
Q 005870 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTE 373 (672)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (672)
+...++....++.||.++|+++|+.+++|+||++|++|||||||||+|+|.+.+.. .. .+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999997643 22 3456666776666655443
Q ss_pred ccchHHHHHHhhcCCh---HHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHHH
Q 005870 374 NQDAIDAAIVGMLADP---KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVHA 449 (672)
Q Consensus 374 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~ 449 (672)
.||.+.+++.++... ......++..+.+||++.++++++.+ +| ..+.||++|.+++.|... ...++++.+
T Consensus 342 -~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 -ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred -CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 469999998875431 11111234567889999888777643 24 467899999999998542 234567788
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 005870 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (672)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~ 529 (672)
..++++++|+|++++|++. +++|+++++|++||+++++|++||++||+++|+|||++.+|.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 530 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
|++ ++++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 995 36999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 005870 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (672)
Q Consensus 610 g~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~ 658 (672)
|+|+|.||++||+|++++|+..+.+++++||++.-.--....|+++..+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999987433344566665443
No 18
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.4e-89 Score=815.31 Aligned_cols=609 Identities=20% Similarity=0.259 Sum_probs=482.3
Q ss_pred cCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005870 49 FGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNA 124 (672)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~ 124 (672)
|..|.+.+.+|++| ..|++||.++.+++|++++++++++... +...+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s--~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS--PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC--CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999886 5789999999999999999999986432 22345566777888889999999999999998
Q ss_pred HHHHHHhcCCceEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCC----eEEeccCcCCCCcccccCCC--
Q 005870 125 AAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (672)
Q Consensus 125 ~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~~-- 197 (672)
.++. .++.++|+|+ |++++++|+||+|||+|.|++||+||||++|++++. ++||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 3578999997 899999999999999999999999999999998543 68999999999999988631
Q ss_pred ----------------------------------------------Ccceeceeeee-CceEEEEEEecccccchhhhhh
Q 005870 198 ----------------------------------------------DGVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (672)
Q Consensus 198 ----------------------------------------------~~v~aGt~v~~-g~~~~~V~~tG~~T~~g~i~~~ 230 (672)
|.+++||.+.+ |.++|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46789999998 899999999999998876322
Q ss_pred hcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----cccc---------------chhhHHHHHHHhhcCC
Q 005870 231 VDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQD----REYR---------------PGIDNLLVLLIGGIPI 291 (672)
Q Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~l~~~~P~ 291 (672)
....+.+++++.++++..+++.+.++.+++.+++...+.. ..|. ..+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2235678999999999877554433333333332211111 0121 1455677888999999
Q ss_pred cchHHHHHHHHHHH------HHHhhC----CCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccC-----
Q 005870 292 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----- 356 (672)
Q Consensus 292 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----- 356 (672)
+||+.+++++..++ .+|.++ ++.+|+.+.+|+||++++||+|||||||+|+|++.++.+.....+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 778764 599999999999999999999999999999999998765321000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHccc-------c-------cccchH
Q 005870 357 --------V--------------------D----------------ADTVVLMAAQASR-------T-------ENQDAI 378 (672)
Q Consensus 357 --------~--------------------~----------------~~~~~~~~~~~~~-------~-------~~~~~~ 378 (672)
. + ..+++..++.+.. . ...+|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 0112222222211 1 135799
Q ss_pred HHHHHhhcCChH------------------HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC-
Q 005870 379 DAAIVGMLADPK------------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN- 439 (672)
Q Consensus 379 ~~ai~~~~~~~~------------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~- 439 (672)
|.|++.++...+ .....+++++.+||+|+||||+++++++++++++++||||+.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999987642211 0123578889999999999999999988888999999999999999975
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCeEEEEEeeccCCCC
Q 005870 440 KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPR 494 (672)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-------------------------~~~e~~l~~lG~i~~~d~~r 494 (672)
.++.++.+.+++++|+.+|+||+++|||.+++++. +..|++|+|+|+++++||+|
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 33457788999999999999999999999876431 34689999999999999999
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC------------------------------------
Q 005870 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------------------------------ 538 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------------------------ 538 (672)
++++++|+.|+++||++||+|||+.+||.++|+++|+..+....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997542211
Q ss_pred ---cccccccccccCCCc---cHHHHhhccC--eecccChhhHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 539 ---SALLGQDKDESIAAL---PIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 539 ---~~~~~~~~~~~~~~~---~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
.++.|..++..++.. .+.++...++ |+||++|+||.++|+.+|+. |+.|+|+|||.||++||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 123333333222211 2333444555 99999999999999999998 99999999999999999999999988
Q ss_pred c-cccHHHhhccCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 610 A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 610 g-~~~~~~k~~ad~v~~~~~~~~i~~~i-~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
. .....|+.+||+++.+ |+.+.+++ .+||++|+|+++.+.|.++.|+.+++..++
T Consensus 794 ~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~ 850 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFW 850 (1057)
T ss_pred cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 2222578899999964 99999987 779999999999999999999988665543
No 19
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-88 Score=748.51 Aligned_cols=511 Identities=27% Similarity=0.401 Sum_probs=445.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE-CCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe
Q 005870 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~ 174 (672)
+|.+...++++++++.+++.+...|+++++++|+++.|+++++++ ||++++||.++|+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 446677888888999999999999999999999999999997776 5558999999999999999999999999999999
Q ss_pred cCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHH
Q 005870 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (672)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (672)
|++ .||||+|||||.|+.|.+|+.|++||.+.+|....+|+++|.+|.+++|.++++++ .++++.|+++|+++.++++
T Consensus 253 G~s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 GSS-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred CcE-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 998 89999999999999999999999999999999999999999999999999999998 7789999999999999888
Q ss_pred HHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEee
Q 005870 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (672)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (672)
.++++.++.+++|++..+.+|..++..++++++++|||+|.+++|++...+..+.+++|+++|+..++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 66665555555555554467888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEE
Q 005870 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 334 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (672)
||||||+|++++.++. ... + ++++++.+++..+.. +.||++.|++.+..... ....+..+.+| .+ ++
T Consensus 412 KTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~-S~HPiA~AIv~~a~~~~--~~~~~~~~~i~---G~---Gv 478 (713)
T COG2217 412 KTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQH-SEHPLAKAIVKAAAERG--LPDVEDFEEIP---GR---GV 478 (713)
T ss_pred CCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhc-CCChHHHHHHHHHHhcC--CCCccceeeec---cC---cE
Confidence 9999999999998754 332 2 677888888777654 45699999998644321 11122222222 11 12
Q ss_pred EEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCC
Q 005870 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (672)
Q Consensus 414 ~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~ 493 (672)
.. .-+|+.+ .-|+++.+.+.-.. ... ..+..+.+..+|..++.++... +++|+++++|++
T Consensus 479 ~~-~v~g~~v--~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 479 EA-EVDGERV--LVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred EE-EECCEEE--EEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 11 1245444 44999988753211 111 5566788899999999999887 899999999999
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
||+++++|++||+.|++++|+|||+..+|.++|+++||+ ++++.+.|++|
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHH
Confidence 999999999999999999999999999999999999996 47999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005870 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 653 (672)
.++|+.||.+|++|+|+|||+||+|||.+||||||||.|+|.++++||+++++++++.++++++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhcccc
Q 005870 654 VSITIRIVVSGSLDFSN 670 (672)
Q Consensus 654 ~~~n~~~~~~~~~~~~~ 670 (672)
+.+|+.++...++++.+
T Consensus 669 ~~yn~~~iplA~~g~l~ 685 (713)
T COG2217 669 FGYNAIAIPLAAGGLLT 685 (713)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999999887654
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-88 Score=727.50 Aligned_cols=630 Identities=24% Similarity=0.327 Sum_probs=480.6
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHH
Q 005870 26 VFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIT 105 (672)
Q Consensus 26 ~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~ 105 (672)
..+......+||+.+++..|+..||+|.+..+.++.+..++++..+||. +|.+.+++.|... .+++++..|++
T Consensus 150 ~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfY-lFQ~fSv~lW~~d------~Y~~YA~cI~i 222 (1140)
T KOG0208|consen 150 WYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFY-LFQAFSVALWLAD------SYYYYAFCIVI 222 (1140)
T ss_pred hhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHH-HHHhHHhhhhhcc------cchhhhhHHHH
Confidence 3444445578999999999999999999999999999999999999994 5555555444432 24445555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcC-CCeecccEEEEecCCeEEeccC
Q 005870 106 LLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL-GDIIPADARLLEGDPLKIDQSA 184 (672)
Q Consensus 106 ~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~-G~~iPaD~~ll~g~~l~Vdes~ 184 (672)
+.+.+.....++.++.++.++.+ ......|+|+|||.|++|+++|||||||+.+.+ |-..|||++|++|+| .||||+
T Consensus 223 isv~Si~~sv~e~r~qs~rlr~m-v~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsm 300 (1140)
T KOG0208|consen 223 ISVYSIVLSVYETRKQSIRLRSM-VKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESM 300 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeeccc
Confidence 66777778888888888888774 355678999999999999999999999999999 999999999999998 599999
Q ss_pred cCCCCcccccCCC-------------------Ccceeceeeee------CceEEEEEEecccccchhhhhhhcccCCCCh
Q 005870 185 LTGESLPVTKGPG-------------------DGVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDTTNQVGH 239 (672)
Q Consensus 185 LTGEs~pv~k~~~-------------------~~v~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 239 (672)
|||||.|+.|.|- +.+|+||.+++ +.+.++|++||.+|..|++.|.+..+++ .+
T Consensus 301 LTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP-~~ 379 (1140)
T KOG0208|consen 301 LTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP-VN 379 (1140)
T ss_pred ccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC-cc
Confidence 9999999999872 57899999986 5699999999999999999988877743 33
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccc
Q 005870 240 FQKVLTAIGNF--CICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (672)
Q Consensus 240 ~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~ 317 (672)
++-.-|.+..+ +.++.+++++ ...+.+...+.+....+.+.+.++...+|+|||.+++++..++.+||.|+||+|.+
T Consensus 380 fkfyrds~~fi~~l~~ia~~gfi-y~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 380 FKFYRDSFKFILFLVIIALIGFI-YTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-HHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 44443433211 1111112222 22223334566777888899999999999999999999999999999999999999
Q ss_pred hhhhhhhcCccEEEeeccccccCCccccccceEEecc-----------------------cC-CChH-HHHH-HHHHcc-
Q 005870 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-----------------------KG-VDAD-TVVL-MAAQAS- 370 (672)
Q Consensus 318 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------------------~~-~~~~-~~~~-~~~~~~- 370 (672)
|+.+...|++|++|||||||||++.+.+-.+.....+ .+ ..+. .+.. ++.+.+
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999998654321000 00 0010 1111 111111
Q ss_pred ----cccccchHHHHHHhhcC------------------------ChHH--------Hh-cccceEEEecCCCCCceEEE
Q 005870 371 ----RTENQDAIDAAIVGMLA------------------------DPKE--------AR-AGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 371 ----~~~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~~~~~~f~~~~~~~~v 413 (672)
..-.+||+|..+.+... +|.. .. ..+.+++.+||+|..+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 11234666554432210 0100 01 14778999999999999999
Q ss_pred EEEeC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCeEEE
Q 005870 414 TYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFM 484 (672)
Q Consensus 414 ~~~~~-~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~--------~~~~~e~~l~~l 484 (672)
++..+ +.+.+.|+|||||.|.+.|+.. ..+.++++.++.|+.+|+|++|+|+|+++.. .++..|.+|+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p~-tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKPE-TVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCcc-cCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99854 5688999999999999999864 6788999999999999999999999999866 367889999999
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc------------------------c
Q 005870 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS------------------------A 540 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~------------------------~ 540 (672)
|++.+++++|++++.+|++|+++.|+++|+|||+..||..+||+||+..+..... .
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 9999999999999999999999999999999999999999999999965331100 0
Q ss_pred -----------------------------cccccccccC--CCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEE
Q 005870 541 -----------------------------LLGQDKDESI--AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (672)
Q Consensus 541 -----------------------------~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~ 589 (672)
+.|+.++-.. ..+.+++++.+..|||||+|.||..+|+.||+.|..|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 0000000000 112255567788899999999999999999999999999
Q ss_pred ECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHhcc
Q 005870 590 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI-VVSGSLDF 668 (672)
Q Consensus 590 iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~-~~~~~~~~ 668 (672)
||||+||+.|||+||+||+++++. |.-||.+.-.-.+.+.+...|++||...-.=-..+.|...+.+.. +..+++.+
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~ 935 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYL 935 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeee
Confidence 999999999999999999998643 455788888778999999999999996433333333433333333 44444444
Q ss_pred c
Q 005870 669 S 669 (672)
Q Consensus 669 ~ 669 (672)
.
T Consensus 936 ~ 936 (1140)
T KOG0208|consen 936 I 936 (1140)
T ss_pred e
Confidence 3
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.4e-85 Score=727.01 Aligned_cols=539 Identities=24% Similarity=0.326 Sum_probs=444.4
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC----C--CCCCChhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-e
Q 005870 67 GFMWNPLSWVMEAAAIMAIALANG----G--GKPPDWQDFV---GIITLLVINSTISFIEENNAGNAAAALMARLAPK-G 136 (672)
Q Consensus 67 ~~~~~~~~~~~~~~~~l~~~~~~~----~--~~~~~~~~~~---~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 136 (672)
.||.+|+.+++++++++++++... . +....|++++ .+++.+++..+++.++++++++++++|++..++. +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 567899999999999999987542 1 1112466542 2334467888889999999999999999887764 8
Q ss_pred EEEE-CCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCc---ceeceeeeeCceE
Q 005870 137 KVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIE 212 (672)
Q Consensus 137 ~V~r-~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~ 212 (672)
+|+| ||++++|++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|++|+. ||+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8875 8999999999999999999999999999999999975 899999999999999999975 9999999999999
Q ss_pred EEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCC
Q 005870 213 AVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPI 291 (672)
Q Consensus 213 ~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~ 291 (672)
++|+++|.+|++|++.++++.+ .+++|++...+.+..++.+++++..+..+. +..+.+ ....+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~-~~~~~~--~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWP-FAAYGG--NAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcC--hhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 567888877766655433222222111111 111111 122466678899999999
Q ss_pred cchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHccc
Q 005870 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR 371 (672)
Q Consensus 292 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (672)
+++...+.....++.||.++|+++|+..++|++|++|++|||||||||+|+|++.++. .. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 8877777777789999999999999999999999999999999999999999998743 22 34566777776666554
Q ss_pred ccccchHHHHHHhhcCChHH--HhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHH
Q 005870 372 TENQDAIDAAIVGMLADPKE--ARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVH 448 (672)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~-~~~~~~~~ 448 (672)
. +.||++.+++.++..... .....+..+..||++.++++++.+. +| ..+.||++|.+++.|... ...+..++
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 4 456999999876532111 0112234678899998777765432 34 467899999999887532 22345678
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH
Q 005870 449 AVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 528 (672)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~ 528 (672)
+.+++++++|+|++++|++. +++|+++++||+||+++++|++|+++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999864 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005870 529 LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 529 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
+|++ +++++++|++|..+++.+|++|+.|+|+|||.||+|||++||+|||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9995 3699999999999999999999999999999999999999999999
Q ss_pred cccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 005870 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660 (672)
Q Consensus 609 mg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~ 660 (672)
|++|++.++++||++++++|+..+.+++++||+++-+......|+++.++.-
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 9999999999999999999999999999999999988888888888776653
No 22
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=6.4e-85 Score=766.74 Aligned_cols=608 Identities=18% Similarity=0.179 Sum_probs=472.1
Q ss_pred hcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005870 48 IFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGN 123 (672)
Q Consensus 48 ~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~ 123 (672)
+|..|.+.+.+|++| +.+++||.++.+++|++.++++++..... ...+...++++++++++.+.+.++++++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999877 46789999999999999999998764322 235667788999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe-----cCCeEEeccCcCCCCcccccCCC-
Q 005870 124 AAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVTKGPG- 197 (672)
Q Consensus 124 ~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~-----g~~l~Vdes~LTGEs~pv~k~~~- 197 (672)
+.++.+ +..++|+|+|++++++|++|+|||+|+|++||.||||++|++ |. ++||||+|||||.|+.|.++
T Consensus 164 ~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~-~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 164 SDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGV-AYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred hHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCce-EEEEccccCCeeeeeEecccc
Confidence 987754 567999999999999999999999999999999999999998 44 58999999999999998642
Q ss_pred --------------------------------------------CcceeceeeeeC-ceEEEEEEecccccchhhhhhhc
Q 005870 198 --------------------------------------------DGVYSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (672)
Q Consensus 198 --------------------------------------------~~v~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~ 232 (672)
+.+++|+.+.++ .++|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 345667777766 49999999999997432 2222
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccC-c-----cc-----------------------cchhhHH
Q 005870 233 TTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVM--YPIQD-R-----EY-----------------------RPGIDNL 281 (672)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~-~-----~~-----------------------~~~~~~~ 281 (672)
.+.+.+++++.++++..+++++.++.+++..++. |.... . .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2367789999999987765544433333322221 21100 0 00 0012223
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHhhCC----------CcccchhhhhhhcCccEEEeeccccccCCccccccceEE
Q 005870 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE 351 (672)
Q Consensus 282 ~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 351 (672)
+.++..++|++|++.+++.+...+.++.++. +.||+.+..|+||+|++||+|||||||+|+|++.++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 4566689999999999999988788887754 779999999999999999999999999999999988762
Q ss_pred ecccC-----------------------------C------------C-h-----HHHHHHHHHcc---c----------
Q 005870 352 VFTKG-----------------------------V------------D-A-----DTVVLMAAQAS---R---------- 371 (672)
Q Consensus 352 ~~~~~-----------------------------~------------~-~-----~~~~~~~~~~~---~---------- 371 (672)
....+ . + . .+++...+.|. .
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 0 0 0 11222222221 1
Q ss_pred -----ccccchHHHHHHhhcCCh----------------HHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcH
Q 005870 372 -----TENQDAIDAAIVGMLADP----------------KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAP 430 (672)
Q Consensus 372 -----~~~~~~~~~ai~~~~~~~----------------~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~ 430 (672)
....+|.|.|++.++... ...+..++.++.+||+|+||||+++++.+++++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 112368899998775322 12345788999999999999999999888888999999999
Q ss_pred HHHHHhccCC--hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCeEE
Q 005870 431 EQILNLAHNK--SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQF 483 (672)
Q Consensus 431 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-------------------------~~~e~~l~~ 483 (672)
+.|+++|+.. .+.++.+.+++++|+++|+|||++|||.+++.++ +..|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999753 3457778899999999999999999999975432 246899999
Q ss_pred EEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 005870 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA----------------------- 540 (672)
Q Consensus 484 lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~----------------------- 540 (672)
+|+++++|++|++++++|+.|+++||++||+|||+..+|.++|++||+..+......
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 999999999999999999999999999999999999999999999999654321111
Q ss_pred ------------------------cccccccccCC---CccHHHHhhccC--eecccChhhHHHHHHHHhhC-CCEEEEE
Q 005870 541 ------------------------LLGQDKDESIA---ALPIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMT 590 (672)
Q Consensus 541 ------------------------~~~~~~~~~~~---~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-~~~v~~i 590 (672)
+.|..++..++ ...+.++..++. ++||++|.||.++|+.+|+. ++.|+|+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 11111111111 012334455555 69999999999999999987 5789999
Q ss_pred CCCccCHHHHhhCCeeEEc-c-cccHHHhhccCEEEcCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 591 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 591 GDg~ND~~al~~A~vgIam-g-~~~~~~k~~ad~v~~~~~~~~i~~~i~-~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
|||.||++||++|||||++ | +|. .|..+||+.+.. |.-+.+++- +||+.|+|+.+.+.|.+++|+.+.++.++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~-qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~ 953 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGR-QAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFW 953 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhH-HHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 4 344 466699999955 888888765 79999999999999999999999655543
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=8.5e-82 Score=719.58 Aligned_cols=506 Identities=26% Similarity=0.360 Sum_probs=441.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005870 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
.|.+...++++++++.+++.+.++|+++.+++|+++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 56777888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005870 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
+. .||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|.++++.++++++ .+++++++.+++++.+++++
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 56899999999999998877
Q ss_pred HHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeec
Q 005870 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (672)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (672)
++++.++.+++++.+...+|..++...+++++++|||+|.++.|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66666665555545455677778899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEE
Q 005870 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT 414 (672)
Q Consensus 335 TGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~ 414 (672)
|||||+|+|+|.++. .+ .+.++++++.+++..+ ..+.||++.|++.+.... +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e-~~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVE-QGSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998743 22 2456777777776554 345689999999874321 11 14565555554322
Q ss_pred -EE-eCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCC
Q 005870 415 -YI-DNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492 (672)
Q Consensus 415 -~~-~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~ 492 (672)
+. ..+|+.+. .|+++.+.+. .+.+.+.++.+..+|+|+++++++. +++|+++|+|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~~-------~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPPL-------ADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhhc-------cHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 21 22555544 4899887541 2334556678899999999999865 89999999999
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+||+++++|++|+++|++++|+|||+..++..+++++||. .+++..|++
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999994 367789999
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005870 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~ 652 (672)
|..+++.+++. +.|+|+|||.||+|||+.||||||||++++.++++||+++.++++.++.+++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccc
Q 005870 653 AVSITIRIVVSGSLDFS 669 (672)
Q Consensus 653 ~~~~n~~~~~~~~~~~~ 669 (672)
++.+|+.+++..++|+.
T Consensus 697 a~~~n~~~i~~a~~g~~ 713 (741)
T PRK11033 697 ALGLKAIFLVTTLLGIT 713 (741)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999888776653
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-82 Score=682.89 Aligned_cols=522 Identities=25% Similarity=0.348 Sum_probs=443.6
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCe-EEEEeCCCCCCCcEEEEcCCCeecccEE
Q 005870 93 KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADAR 171 (672)
Q Consensus 93 ~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiI~l~~G~~iPaD~~ 171 (672)
++..|.+...++.++.++.+++...+.++..++..|+++.|.++.++.+|+ .++|+.+.|++||+|+|+||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 333444555666777888999999999999999999999999999999996 8999999999999999999999999999
Q ss_pred EEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHH
Q 005870 172 LLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNF 250 (672)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~ 250 (672)
|++|++ +||||++|||++|+.|++|+.|.+||.+.+|.....++++|.||.+++|.++++++ .++.|.|+++|+++.|
T Consensus 417 Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 417 VVDGSS-EVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EEeCce-eechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 999998 89999999999999999999999999999999999999999999999999999998 6789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccC----------ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhh
Q 005870 251 CICSIAVGMIVEIIVMYPIQD----------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (672)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~ 320 (672)
+++.+++..+..+++|.+... ..+..++...+++++++|||+|.++.|.+...+....+++|+++|..+.
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~ 575 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEA 575 (951)
T ss_pred CCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHH
Confidence 877666655555554443322 2344566777889999999999999999999999999999999999999
Q ss_pred hhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEE
Q 005870 321 IEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVH 400 (672)
Q Consensus 321 le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~ 400 (672)
+|.+.++++|+||||||||+|++.+.+.. ......+..+++.+++..+ ..+.||+..|++.|+.............+
T Consensus 576 LE~~hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~E-s~SeHPig~AIv~yak~~~~~~~~~~~~~ 652 (951)
T KOG0207|consen 576 LEKAHKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAME-SGSEHPIGKAIVDYAKEKLVEPNPEGVLS 652 (951)
T ss_pred HHHHhcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHh-cCCcCchHHHHHHHHHhcccccCccccce
Confidence 99999999999999999999999998754 4443356666666555543 44567999999998754331111111122
Q ss_pred EecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCC
Q 005870 401 FLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480 (672)
Q Consensus 401 ~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~ 480 (672)
.-.|..+... +.+. .+++. +.-|+.+++.+.-. ...+.++..+++....|+.+.+++...
T Consensus 653 ~~~~pg~g~~--~~~~-~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~------------ 712 (951)
T KOG0207|consen 653 FEYFPGEGIY--VTVT-VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG------------ 712 (951)
T ss_pred eecccCCCcc--cceE-EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC------------
Confidence 2222222212 1111 12333 45699998877432 234557778888889999999999988
Q ss_pred eEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhh
Q 005870 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560 (672)
Q Consensus 481 l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (672)
++.|++.++|++|||+..+|+.||+.|++++|+|||+..+|+++|+++|++
T Consensus 713 -~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------- 763 (951)
T KOG0207|consen 713 -QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------- 763 (951)
T ss_pred -EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------
Confidence 999999999999999999999999999999999999999999999999975
Q ss_pred ccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHH
Q 005870 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (672)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr 640 (672)
.||+...|+||.+.|+.+|+++..|+|+|||+||+|||.+||||||||.|++.|.++||+|++.|++..++.+++.+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhccc
Q 005870 641 AIFQRMKNYTIYAVSITIRIVVSGSLDFS 669 (672)
Q Consensus 641 ~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 669 (672)
++++|+|.|+.|++.+|+..+..+.+.|.
T Consensus 842 kt~~rIk~N~~~A~~yn~~~IpIAagvF~ 870 (951)
T KOG0207|consen 842 KTVKRIKLNFVWALIYNLVGIPIAAGVFA 870 (951)
T ss_pred HHHhhHHHHHHHHHHHHHhhhhhheeccc
Confidence 99999999999999999998888877764
No 25
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=4.6e-78 Score=669.29 Aligned_cols=505 Identities=28% Similarity=0.406 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCc
Q 005870 77 MEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGD 156 (672)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GD 156 (672)
+.++++++++++ .|+++..++++++++.+++.++++++.+.++++.+..+++++|+|||+++++++++|+|||
T Consensus 5 ~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GD 77 (536)
T TIGR01512 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGD 77 (536)
T ss_pred HHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCC
Confidence 344555666553 6888888899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005870 157 IISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 157 iI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
+|.+++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|++.++++++ .
T Consensus 78 iv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~ 156 (536)
T TIGR01512 78 VVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQS 156 (536)
T ss_pred EEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhh
Confidence 999999999999999999987 79999999999999999999999999999999999999999999999999988876 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005870 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.+++++.++++.++.+.++.+++++.... +..++..++++++++|||+||+++++++..+..++.++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gili 234 (536)
T TIGR01512 157 RKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILI 234 (536)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEE
Confidence 678999999999988776655555544444443222 233777889999999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcc
Q 005870 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAG 395 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~ 395 (672)
|+++++|++|+++++|||||||||+|+|++.+.. ..+++.+++..+ ..+.||++.|++.++.... .
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~e-~~~~hp~~~Ai~~~~~~~~----~ 300 (536)
T TIGR01512 235 KGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAAE-QASSHPLARAIVDYARKRE----N 300 (536)
T ss_pred cCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHHh-ccCCCcHHHHHHHHHHhcC----C
Confidence 9999999999999999999999999999998643 125566665443 4556799999998754321 1
Q ss_pred cceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCC
Q 005870 396 IQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKD 475 (672)
Q Consensus 396 ~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~ 475 (672)
+...+.+|. + ++.. ..+|+.+. .|+++.+.+... ..+..+|.+++.++.+.
T Consensus 301 ~~~~~~~~g---~---gi~~-~~~g~~~~--ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------- 351 (536)
T TIGR01512 301 VESVEEVPG---E---GVRA-VVDGGEVR--IGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------- 351 (536)
T ss_pred CcceEEecC---C---eEEE-EECCeEEE--EcCHHHHhhcCC-------------cchhhCCCeEEEEEECC-------
Confidence 222222221 1 1111 12454443 488876644210 14567888888887654
Q ss_pred CCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCC-cEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCcc
Q 005870 476 SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALP 554 (672)
Q Consensus 476 ~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 554 (672)
.++|.+.++|+++|+++++|+.|+++|+ +++|+|||+..++..+++++|++
T Consensus 352 ------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~---------------------- 403 (536)
T TIGR01512 352 ------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------------------- 403 (536)
T ss_pred ------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh----------------------
Confidence 8999999999999999999999999999 99999999999999999999995
Q ss_pred HHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHH
Q 005870 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
++|++..|++|..+++.++.+++.|+|+|||.||++|++.||+||+|| ++++.++++||+++.+++++.+.
T Consensus 404 --------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~ 475 (536)
T TIGR01512 404 --------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLP 475 (536)
T ss_pred --------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHH
Confidence 257888999999999999999999999999999999999999999999 78999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccc
Q 005870 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLDFSN 670 (672)
Q Consensus 634 ~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 670 (672)
+++++||++++++++|+.|++.+|+..+...++|+.+
T Consensus 476 ~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~ 512 (536)
T TIGR01512 476 QAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLP 512 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999998888888764
No 26
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.3e-77 Score=670.10 Aligned_cols=522 Identities=26% Similarity=0.375 Sum_probs=437.4
Q ss_pred HHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECC-eEEEEeCCCCCCCc
Q 005870 78 EAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDG-RWNEQDASILVPGD 156 (672)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g-~~~~i~~~~L~~GD 156 (672)
.++++++++++ .|.+++.++++++++.+++.++++++++.+++|....|++++|+||| ++++|++++|+|||
T Consensus 6 ~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GD 78 (556)
T TIGR01525 6 ALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGD 78 (556)
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCC
Confidence 34445555553 67788889999999999999999999999999998888999999996 99999999999999
Q ss_pred EEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005870 157 IISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 157 iI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
+|.+++||.|||||+|++|++ .||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|++|++.+++.++ .
T Consensus 79 iv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~ 157 (556)
T TIGR01525 79 IVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQS 157 (556)
T ss_pred EEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhh
Confidence 999999999999999999996 79999999999999999999999999999999999999999999999999988776 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005870 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.+++++.++++.++++.++.+++++... .. ..+..++++++++|||+||+++++++..+..+++++|+++
T Consensus 158 ~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 158 SKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-AL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 67889999999998877655555554444443322 12 6788899999999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCC--hHHHHHHHHHcccccccchHHHHHHhhcCChHHHh
Q 005870 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD--ADTVVLMAAQASRTENQDAIDAAIVGMLADPKEAR 393 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~ 393 (672)
|+++++|.+|++|++|||||||||+|+|++.++. ... +.+ .++++.+++..+. .+.||++.|+..++.......
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~~ 310 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLEL 310 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999998754 221 222 5666666665543 456799999998764321100
Q ss_pred cccc-eEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC
Q 005870 394 AGIQ-EVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG 472 (672)
Q Consensus 394 ~~~~-~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~ 472 (672)
.. + ....+| .+ ++.. ..+|. ..+..|+++.+ +.... + .+.....++.+..+|+|+++++.+.
T Consensus 311 ~~-~~~~~~~~---~~---gi~~-~~~g~-~~~~lg~~~~~-~~~~~--~-~~~~~~~~~~~~~~g~~~~~v~~~~---- 373 (556)
T TIGR01525 311 PK-QEDVEEVP---GK---GVEA-TVDGQ-EEVRIGNPRLL-ELAAE--P-ISASPDLLNEGESQGKTVVFVAVDG---- 373 (556)
T ss_pred cc-ccCeeEec---CC---eEEE-EECCe-eEEEEecHHHH-hhcCC--C-chhhHHHHHHHhhCCcEEEEEEECC----
Confidence 00 1 111111 11 1111 11341 23445888876 21111 1 1223455677889999999999865
Q ss_pred CCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCC-CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCC
Q 005870 473 RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIA 551 (672)
Q Consensus 473 ~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 551 (672)
+++|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 ---------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------- 425 (556)
T TIGR01525 374 ---------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------- 425 (556)
T ss_pred ---------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-------------------
Confidence 899999999999999999999999999 999999999999999999999995
Q ss_pred CccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH
Q 005870 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (672)
Q Consensus 552 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~ 631 (672)
++|++..|++|..+++.++..++.|+|+|||.||++|++.||+|+++|++++.+++.||+++.+++++.
T Consensus 426 -----------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~ 494 (556)
T TIGR01525 426 -----------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494 (556)
T ss_pred -----------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHH
Confidence 358889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccc
Q 005870 632 IISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLDFSN 670 (672)
Q Consensus 632 i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 670 (672)
+.+++++||+++++|++++.|++++|+..+..+++||.+
T Consensus 495 l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~ 533 (556)
T TIGR01525 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLP 533 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999998888764
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=3.9e-78 Score=668.38 Aligned_cols=477 Identities=35% Similarity=0.526 Sum_probs=416.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEe
Q 005870 104 ITLLVINSTISFIEENNAGNAAAALMA--RLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181 (672)
Q Consensus 104 i~~v~i~~~~~~~~~~~~~~~~~~l~~--~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vd 181 (672)
+++++++.+++.+++++.++..+.+.+ ..+++++|+|+| ++.|++++|+|||+|.+++||+|||||+|++|++ .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 345677888999999999999999888 778899999999 9999999999999999999999999999999986 799
Q ss_pred ccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHH-HHHHHHHHHHH
Q 005870 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIG-NFCICSIAVGM 259 (672)
Q Consensus 182 es~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~-~~~~~~~~~~~ 259 (672)
||+|||||.|+.|.+|+.+++||.+.+|.+.+.|+++|.+|..+++..++... ..++++++..+++. .++++++++.+
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998776 34678889999988 55554443333
Q ss_pred HHHHHHHhhccCc--cccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeecccc
Q 005870 260 IVEIIVMYPIQDR--EYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (672)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 337 (672)
++.++.++..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3333332222112 36678899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEEEEe
Q 005870 338 LTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYID 417 (672)
Q Consensus 338 LT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~ 417 (672)
||+|+|++.++.. ... ...+.||++.|++.+... +.+...||++.+++++..+..
T Consensus 241 LT~~~~~v~~~~~--~~~---------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSV--LGG---------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEe--cCC---------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 9999999987542 110 124568999999887532 123567999999888888764
Q ss_pred CCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcch
Q 005870 418 NAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDS 497 (672)
Q Consensus 418 ~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~ 497 (672)
+++ .++||+++.+.+.|.. +.+..+.+..+|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 323 4689999999988742 2334556788999999999987 8999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHH
Q 005870 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIV 577 (672)
Q Consensus 498 ~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 577 (672)
+++|+.|+++|++++|+|||+..++..+|+++|+ +++++|++|.+++
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 5889999999999
Q ss_pred HHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005870 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (672)
Q Consensus 578 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n 657 (672)
+.+|..|+.|+|+|||.||+|||+.|||||||+ ++++||++++++++..+..++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 005870 658 IRIVVSGSLDF 668 (672)
Q Consensus 658 ~~~~~~~~~~~ 668 (672)
+.++..+++++
T Consensus 475 ~~~~~~a~~~~ 485 (499)
T TIGR01494 475 LILIPLAALLA 485 (499)
T ss_pred HHHHHHHHHHH
Confidence 99977776543
No 28
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.1e-76 Score=660.40 Aligned_cols=497 Identities=27% Similarity=0.407 Sum_probs=420.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe
Q 005870 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~ 174 (672)
+|.....++++++++.+++.+.++++++.+++|++..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555566677778888999999999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHH
Q 005870 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (672)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (672)
|++ .||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|++.++++++ .+++++++..++++.++++
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 997 79999999999999999999999999999999999999999999999999999877 5678999999999998876
Q ss_pred HHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEee
Q 005870 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (672)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (672)
.+++..++.+++ |. .++..++++++++|||+|++++++++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~~~-~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFVI-WL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHHH-HH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 655544443333 21 3778899999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEE
Q 005870 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 334 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (672)
||||||+|+|++.++. .. .+.++++++.+++..+. .+.||++.|++.++.............+.+| . + ++
T Consensus 284 KTGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~-~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~---g-~--Gi 353 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEA-GSEHPLAKAIVSYAKEKGITLVEVSDFKAIP---G-I--GV 353 (562)
T ss_pred CCCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCcCCCCCeEEEC---C-c--eE
Confidence 9999999999998743 22 23456777777766554 3457999999987542211101111122221 1 1 11
Q ss_pred EEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCC
Q 005870 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (672)
Q Consensus 414 ~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~ 493 (672)
... .+|+. +..|+++.+.+... . +..+.++|.+++.++... +++|.+.++|++
T Consensus 354 ~~~-~~g~~--~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 354 EGT-VEGTK--IQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred EEE-ECCEE--EEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 111 23443 45699998754211 1 112457899999998765 899999999999
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
||+++++|++|++.|++++|+|||+...+..+++++|++ +|++..|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 4778889999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005870 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 653 (672)
..+++.++.+++.|+|+|||.||++|++.||+||+||++++.+++.||+++.+++++.+.+++++||+++++|++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccc
Q 005870 654 VSITIRIVVSGSLDFS 669 (672)
Q Consensus 654 ~~~n~~~~~~~~~~~~ 669 (672)
+.+|+..+..++++|.
T Consensus 536 ~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999888776554
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.4e-75 Score=682.11 Aligned_cols=507 Identities=24% Similarity=0.354 Sum_probs=430.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005870 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
+|.+...++++++++.+++.+.+.++.+.+++|+++.|++++++|+|++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005870 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
+. .||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.++++.++++++ .+++++++..++++.+++++
T Consensus 365 ~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 EA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred eE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 56789999999999887766
Q ss_pred HHHHHHHHHHHHhhccC-ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEee
Q 005870 255 IAVGMIVEIIVMYPIQD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (672)
Q Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (672)
++++.++.+++|+.... ..|...+..++++++++|||+|++++++++..+..+++++|+++|+++++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 55554444444333211 12445667789999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEE
Q 005870 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 334 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (672)
||||||+|+|+|.+.. .. .+.++++++.+++..+. .+.||++.|++.+..+. ... ...+|..... .++
T Consensus 524 KTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g-~Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLP--QVNGFRTLRG-LGV 591 (834)
T ss_pred CCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCC--CcccceEecc-eEE
Confidence 9999999999997643 22 24566677777666543 45679999998764321 111 0112221111 122
Q ss_pred EEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCC
Q 005870 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (672)
Q Consensus 414 ~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~ 493 (672)
... .+|+. +.+|+++.+.+.... .+.+.+.++.+..+|.++++++++. .++|++.++|++
T Consensus 592 ~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 211 24543 456999987553211 2345666778889999999999876 899999999999
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
||+++++|++|++.|++++|+|||+..++..+++++|+. .++++..|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHH
Confidence 999999999999999999999999999999999999995 26888999999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005870 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 653 (672)
.++++.++.+++.|+|+|||.||++|++.||+||+||++++.++++||+++++++++++..++++||+++++|++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHH
Q 005870 654 VSITIRIVVSGS 665 (672)
Q Consensus 654 ~~~n~~~~~~~~ 665 (672)
+.+|+.++..++
T Consensus 782 ~~yn~~~i~~a~ 793 (834)
T PRK10671 782 FIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHH
Confidence 999999987765
No 30
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-76 Score=620.25 Aligned_cols=563 Identities=23% Similarity=0.265 Sum_probs=425.2
Q ss_pred CCCCH-HHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005870 35 EGLSS-QAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (672)
Q Consensus 35 ~GL~~-~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~ 113 (672)
+|+.. .+++....+||+|..+.+.|++-..|.+....||..+..++..++.+ . .+|++.+.-+++++..-.-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCL-D------eyWYySlFtLfMli~fE~t 233 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCL-D------EYWYYSLFTLFMLIAFEAT 233 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHh-H------HHHHHHHHHHHHHHHHHHH
Confidence 46663 44445555699999999999998888999999996555555555544 3 3777776666665544333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcC---CCeecccEEEEecCCeEEeccCcCCCCc
Q 005870 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL---GDIIPADARLLEGDPLKIDQSALTGESL 190 (672)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~---G~~iPaD~~ll~g~~l~Vdes~LTGEs~ 190 (672)
-..|+.+.-+.++. |...|..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+++.|+| .|||++|||||.
T Consensus 234 lV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESv 311 (1160)
T KOG0209|consen 234 LVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCc
Confidence 34444444333333 3445667999999999999999999999999987 678999999999998 599999999999
Q ss_pred ccccCC-----------------CCcceeceeeee-------------CceEEEEEEecccccchhhhhhhcccCCCChH
Q 005870 191 PVTKGP-----------------GDGVYSGSTCKQ-------------GEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240 (672)
Q Consensus 191 pv~k~~-----------------~~~v~aGt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 240 (672)
|..|.+ .+++|.||.+++ |.+.+.|++||.+|..|++.|.+....++-.-
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 999976 247999999985 56999999999999999988877664222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCc
Q 005870 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQD------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (672)
Q Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~il 314 (672)
.+.-..+ +++++++++++.. +|.|.. ++-...+..+..++...+|+.||+-++++...+...|+|.+++
T Consensus 392 Nn~Etf~---FILFLlVFAiaAa--~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vy 466 (1160)
T KOG0209|consen 392 NNRETFI---FILFLLVFAIAAA--GYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVY 466 (1160)
T ss_pred ccHHHHH---HHHHHHHHHHHhh--heEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhcee
Confidence 1111111 1222222222222 222221 2222345566777888999999999999999999999999999
Q ss_pred ccchhhhhhhcCccEEEeeccccccCCccccccceEEeccc-------CCChHHHHHHHH--Hccc---ccccchHHHHH
Q 005870 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK-------GVDADTVVLMAA--QASR---TENQDAIDAAI 382 (672)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-------~~~~~~~~~~~~--~~~~---~~~~~~~~~ai 382 (672)
|..|.++.-.|++|++|||||||||+..|.|.++.-..... ....+.+..+++ .... .--+||++.|.
T Consensus 467 CTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~ 546 (1160)
T KOG0209|consen 467 CTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKAT 546 (1160)
T ss_pred ecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHH
Confidence 99999999999999999999999999999998643101110 111223333332 2222 23478999999
Q ss_pred HhhcCChHH----------HhcccceEEEecCCCCCceEEEEEEeC----CCeEEEEEcCcHHHHHHhccCChHHHHHHH
Q 005870 383 VGMLADPKE----------ARAGIQEVHFLPFNPTDKRTALTYIDN----AGKMHRVSKGAPEQILNLAHNKSDIERRVH 448 (672)
Q Consensus 383 ~~~~~~~~~----------~~~~~~~~~~~~f~~~~~~~~v~~~~~----~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~ 448 (672)
+..+.-..+ ...+.++.+.+.|+|..|||+++.... +-+++..+|||||.|.++.. +.+..++
T Consensus 547 l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~ 623 (1160)
T KOG0209|consen 547 LEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYD 623 (1160)
T ss_pred HHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHH
Confidence 887521111 112477888999999999999887632 23678889999999998765 6788899
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005870 449 AVIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~l~~~--------~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
+...+|+++|.||+|++||+++.- .+++.|.+|+|.|++.|..|+++|++++|+.|++.+++++|+|||++.
T Consensus 624 ~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpL 703 (1160)
T KOG0209|consen 624 EIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPL 703 (1160)
T ss_pred HHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCcc
Confidence 999999999999999999998731 367889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCC---------------------------------------CCcccccccccccCCCccHHHHhhc
Q 005870 521 IGKETGRRLGMGTNMY---------------------------------------PSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 521 ~a~~ia~~~gi~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
||.++|+++||..... ++.+++|..++.......+..++.+
T Consensus 704 TAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h 783 (1160)
T KOG0209|consen 704 TACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPH 783 (1160)
T ss_pred chheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh
Confidence 9999999999965311 0112333333333334455667777
Q ss_pred cCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccH
Q 005870 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~ 614 (672)
..||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+-|+++
T Consensus 784 v~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 784 VWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 88999999999999999999999999999999999999999999999975554
No 31
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-72 Score=640.20 Aligned_cols=611 Identities=19% Similarity=0.244 Sum_probs=471.0
Q ss_pred HHHhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 005870 45 RLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120 (672)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~ 120 (672)
+..+|-.|.+.+.+|+++ +.+++||.++.|++|++.++++++. . ++...|.+.+++++++.++.+.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~--~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-L--SPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-c--cccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999999876 5789999999999999999999987 2 25567888899999999999999999999
Q ss_pred HHHHHHHHHHhcCCceEEEECCe-EEEEeCCCCCCCcEEEEcCCCeecccEEEEecCC----eEEeccCcCCCCcccccC
Q 005870 121 AGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (672)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~ 195 (672)
++++..+++ ..++.|.+++. ++...|++|++||+|.+..++.+|||.++++++. |+|++++|+||++.+.|.
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999988765 45688888644 8999999999999999999999999999997553 689999999999998875
Q ss_pred C-----------------------------------------------CCcceeceeeeeCc-eEEEEEEecccccchhh
Q 005870 196 P-----------------------------------------------GDGVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (672)
Q Consensus 196 ~-----------------------------------------------~~~v~aGt~v~~g~-~~~~V~~tG~~T~~g~i 227 (672)
. .+.+++|+.+.++. +.+.|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 23577888888876 89999999999987653
Q ss_pred hhhhcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccC------------c----cccchhhHHHHHHHhhc
Q 005870 228 AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQD------------R----EYRPGIDNLLVLLIGGI 289 (672)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~------------~----~~~~~~~~~~~~l~~~~ 289 (672)
. -..+.+++.+++..+.....+++.++..+++..+. .|.... . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 22346777888888877655443333222222221 111100 0 00112345567788899
Q ss_pred CCcchHHHHHHHHHHHHHHhh----------CCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCCh
Q 005870 290 PIAMPTVLSVTMAIGSHRLSQ----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDA 359 (672)
Q Consensus 290 P~~L~~~~~~~~~~~~~~l~~----------~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~ 359 (672)
|.+|++.+++....++..+.+ ....+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999998887744433 3678999999999999999999999999999999998876533222110
Q ss_pred H--------------------------------------------HHHHHHHHc---cc----------ccccchHHHHH
Q 005870 360 D--------------------------------------------TVVLMAAQA---SR----------TENQDAIDAAI 382 (672)
Q Consensus 360 ~--------------------------------------------~~~~~~~~~---~~----------~~~~~~~~~ai 382 (672)
+ +.....+.+ .. .+...|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 111111111 11 11235777887
Q ss_pred HhhcCChH----------------HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhcc-CChHHHH
Q 005870 383 VGMLADPK----------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAH-NKSDIER 445 (672)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~-~~~~~~~ 445 (672)
+..+.+.. .....++.++.++|+|.||||||+++.++|+..+|||||+..|.++++ +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 76542211 013578999999999999999999999999999999999999999998 4456777
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCeEEEEEeeccCCCCcchHHH
Q 005870 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPRHDSAET 500 (672)
Q Consensus 446 ~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-------------------------~~~e~~l~~lG~i~~~d~~r~~~~~~ 500 (672)
...+++++|+.+|+|||++|||.++++++ +.+|++|+++|.+++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88899999999999999999999987652 35689999999999999999999999
Q ss_pred HHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc--------------------------------------
Q 005870 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-------------------------------------- 542 (672)
Q Consensus 501 I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-------------------------------------- 542 (672)
|+.|++||||+||+|||+.+||..++..|++..+......+.
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 999999999999999999999999999999876433211111
Q ss_pred -------cccccccCCCccHHH---Hh--hccCeecccChhhHHHHHHHHhh-CCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 543 -------GQDKDESIAALPIDE---LI--EKADGFAGVFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 543 -------~~~~~~~~~~~~~~~---~~--~~~~v~~~~~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
|..+...++...... +. .+..++||++|.||+.+|+..++ .+..+++||||+||++|++.|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111111111 11 13458999999999999999974 478999999999999999999999999
Q ss_pred c--cccHHHhhccCEEEcCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005870 610 A--DATDAARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 610 g--~~~~~~k~~ad~v~~~~~~~~i~~~-i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
+ +|.+ |..+||+.+.. |.-+.++ +-+||+.|.|+.+++.|.+++|+.+.+..+.
T Consensus 820 sG~EGmQ-AvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fw 876 (1151)
T KOG0206|consen 820 SGQEGMQ-AVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFW 876 (1151)
T ss_pred ccchhhh-hhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4555 55589999876 4444443 4569999999999999999999999666543
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-70 Score=566.14 Aligned_cols=594 Identities=21% Similarity=0.251 Sum_probs=442.5
Q ss_pred HHHHhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 005870 44 ERLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEEN 119 (672)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~ 119 (672)
.+.++|.+|.+...++.++ ..+++||...++.+|++.++.++......+. -..++.++.++++++...+.+++.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~--l~ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY--LSTYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc--hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 5677889999999888754 4567888888888888888887765443332 123345666777777788888888
Q ss_pred HHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe-----cCCeEEeccCcCCCCccccc
Q 005870 120 NAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVTK 194 (672)
Q Consensus 120 ~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~-----g~~l~Vdes~LTGEs~pv~k 194 (672)
++.+.....++.. ..+.-|+|...+ |+++|++||+|.+..+++||||.++++ |+ +.|-+-.|+||+.-+.|
T Consensus 152 ~r~~rd~~~Nse~--y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~-~FiRTDQLDGETDWKLr 227 (1051)
T KOG0210|consen 152 KRRRRDRELNSEK--YTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGS-CFIRTDQLDGETDWKLR 227 (1051)
T ss_pred HHHHhhhhhhhhh--heeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCc-eEEeccccCCcccceee
Confidence 8777776654322 223447776555 999999999999999999999999995 44 47999999999976665
Q ss_pred CC-----------------------------------------------CCcceeceeeeeCceEEEEEEecccccchhh
Q 005870 195 GP-----------------------------------------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKA 227 (672)
Q Consensus 195 ~~-----------------------------------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i 227 (672)
-| .|.++++|.+.+|.++|+|++||.+|+.-
T Consensus 228 l~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRsv-- 305 (1051)
T KOG0210|consen 228 LPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRSV-- 305 (1051)
T ss_pred ccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHHH--
Confidence 33 46799999999999999999999999631
Q ss_pred hhhhcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHH
Q 005870 228 AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307 (672)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~ 307 (672)
++...-..+...++..++.+.+.+.+.+++..++.. .....+..|...+.+++.++...+|++|-+.+.++...-+..
T Consensus 306 MNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv--~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~ 383 (1051)
T KOG0210|consen 306 MNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMV--AMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQ 383 (1051)
T ss_pred hccCCcccccceeeeecccHHHHHHHHHHHHHHHHH--HhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhh
Confidence 111111144456677788888776655444433322 223345677788899999999999999999999999988877
Q ss_pred HhhC----CCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChH-H---------------------
Q 005870 308 LSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD-T--------------------- 361 (672)
Q Consensus 308 l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~-~--------------------- 361 (672)
+.++ |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.- +
T Consensus 384 i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~ 463 (1051)
T KOG0210|consen 384 IEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALS 463 (1051)
T ss_pred cccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccch
Confidence 7775 6789999999999999999999999999999999987754332211110 0
Q ss_pred -------------HHHHHHHcc--cc---------cccchHHHHHHhhcC-----------------ChHHHhcccceEE
Q 005870 362 -------------VVLMAAQAS--RT---------ENQDAIDAAIVGMLA-----------------DPKEARAGIQEVH 400 (672)
Q Consensus 362 -------------~~~~~~~~~--~~---------~~~~~~~~ai~~~~~-----------------~~~~~~~~~~~~~ 400 (672)
+..++.+.+ .. ...+|.+.|++++.+ .+.....+++++.
T Consensus 464 ~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~ 543 (1051)
T KOG0210|consen 464 RVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQ 543 (1051)
T ss_pred hhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEE
Confidence 111111111 00 011344444443321 1111234789999
Q ss_pred EecCCCCCceEEEEEEeC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCC----
Q 005870 401 FLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKD---- 475 (672)
Q Consensus 401 ~~~f~~~~~~~~v~~~~~-~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~---- 475 (672)
.|||+|+.|||+++++++ .++...|.|||+..|....... ++.++....|+++|+|++.+|.|.+++++++
T Consensus 544 vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~ 619 (1051)
T KOG0210|consen 544 VFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEE 619 (1051)
T ss_pred EeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHH
Confidence 999999999999999975 7899999999999998876543 4566677889999999999999999876521
Q ss_pred ----------------------CCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005870 476 ----------------------SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 476 ----------------------~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
.+|.+|.++|+.++||+++++++.+++.||+|||++||+|||+.+||..+|+..++..
T Consensus 620 ~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~s 699 (1051)
T KOG0210|consen 620 AYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFS 699 (1051)
T ss_pred HHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhcccee
Confidence 3588999999999999999999999999999999999999999999999999999865
Q ss_pred CCCC--------------------------CcccccccccccCC--CccHHHHhh--ccCeecccChhhHHHHHHHHhhC
Q 005870 534 NMYP--------------------------SSALLGQDKDESIA--ALPIDELIE--KADGFAGVFPEHKYEIVKRLQAR 583 (672)
Q Consensus 534 ~~~~--------------------------~~~~~~~~~~~~~~--~~~~~~~~~--~~~v~~~~~p~~K~~iv~~l~~~ 583 (672)
.... ..++.|+.++-.+. ..++-++.. ...++||++|.||+++++.+|++
T Consensus 700 R~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~ 779 (1051)
T KOG0210|consen 700 RGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKK 779 (1051)
T ss_pred cCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHh
Confidence 3221 11222222211100 112223222 23489999999999999999986
Q ss_pred -CCEEEEECCCccCHHHHhhCCeeEEc-ccccHHHhhccCEEEcCCChhHHHHHHHH-HHHHHHHHHHHHHHH
Q 005870 584 -KHICGMTGDGVNDAPALKKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYA 653 (672)
Q Consensus 584 -~~~v~~iGDg~ND~~al~~A~vgIam-g~~~~~~k~~ad~v~~~~~~~~i~~~i~~-gr~~~~~i~~~i~~~ 653 (672)
|..|+++|||.||++|+++||+||++ |+....|.-|||+.+.. |+.+.+++.+ ||..|+|-.+.-+|.
T Consensus 780 t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 780 TGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred hCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHH
Confidence 88999999999999999999999998 64334455699999965 8899988765 999999987766554
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-62 Score=494.65 Aligned_cols=479 Identities=26% Similarity=0.387 Sum_probs=379.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCc
Q 005870 108 VINSTISFIEENNAGNAAAALMARL-APKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSAL 185 (672)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V~r~-g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~L 185 (672)
++..+.+.+.|-|.+.+.+.|++.. ...++++++ |.++.+++.+|+.||+|.++.||+||+||.+++|.+ +||||.+
T Consensus 77 lFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAI 155 (681)
T COG2216 77 LFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAI 155 (681)
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhc
Confidence 3444455566655444445544332 234666665 899999999999999999999999999999999998 8999999
Q ss_pred CCCCcccccCCC---CcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHH
Q 005870 186 TGESLPVTKGPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIV 261 (672)
Q Consensus 186 TGEs~pv~k~~~---~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~ 261 (672)
||||.||.|++| +-|-.||.+++..++.++++.-.+|.+.||+.+++.+ ++++|-+--++-+..- +.+.+++
T Consensus 156 TGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~----LTliFL~ 231 (681)
T COG2216 156 TGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSG----LTLIFLL 231 (681)
T ss_pred cCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHH----HHHHHHH
Confidence 999999999998 6799999999999999999999999999999999887 5555544332222111 1111111
Q ss_pred HHHHHhhccCc--cccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeecccccc
Q 005870 262 EIIVMYPIQDR--EYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339 (672)
Q Consensus 262 ~~~~~~~~~~~--~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT 339 (672)
...-.|.+..+ .-...+...+++++|.+|-...-.++..-..++.|+.+.|++.++.+++|.+|.+|++..|||||+|
T Consensus 232 ~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT 311 (681)
T COG2216 232 AVATLYPFAIYSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTIT 311 (681)
T ss_pred HHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCcee
Confidence 11111111110 1123456778899999999888777776777899999999999999999999999999999999999
Q ss_pred CCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHH-Hh-cccc-eEEEecCCCCCceEEEEEE
Q 005870 340 LNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKE-AR-AGIQ-EVHFLPFNPTDKRTALTYI 416 (672)
Q Consensus 340 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~-~~-~~~~-~~~~~~f~~~~~~~~v~~~ 416 (672)
-|+=.-.+.. ..++.+.+++...+..++-.. ..|..++++....+... .+ .... ..++.||+.+.+++++..
T Consensus 312 ~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~D-eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~- 386 (681)
T COG2216 312 LGNRQASEFI---PVPGVSEEELADAAQLASLAD-ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL- 386 (681)
T ss_pred ecchhhhhee---cCCCCCHHHHHHHHHHhhhcc-CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC-
Confidence 9975554432 234778888776666554433 33566666654432210 11 1111 457899998877666543
Q ss_pred eCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCc
Q 005870 417 DNAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRH 495 (672)
Q Consensus 417 ~~~~~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~ 495 (672)
+++ ..+.||+.+.+........ ..++++++..++-++.|-..++++... +++|++.++|-++|
T Consensus 387 -~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~ 450 (681)
T COG2216 387 -PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKP 450 (681)
T ss_pred -CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcch
Confidence 233 5567999999999876433 368889999999999999999999877 99999999999999
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHH
Q 005870 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYE 575 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 575 (672)
+.+|-+.+||+.||+++|+||||+.||..+|++.|+++ ..++++|++|.+
T Consensus 451 Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------------fiAeatPEdK~~ 500 (681)
T COG2216 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------FIAEATPEDKLA 500 (681)
T ss_pred hHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------------hhhcCChHHHHH
Confidence 99999999999999999999999999999999999973 479999999999
Q ss_pred HHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHH
Q 005870 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (672)
Q Consensus 576 iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~ 642 (672)
+++.-|.+|+-|+|+|||.||+|||.+||||+||.+|+++|||++++|=+|+|...+.+.++.|++.
T Consensus 501 ~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 501 LIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred HHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.4e-36 Score=303.43 Aligned_cols=220 Identities=36% Similarity=0.536 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe-cCCeEE
Q 005870 103 IITLLVINSTISFIEENNAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-GDPLKI 180 (672)
Q Consensus 103 ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~-~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~-g~~l~V 180 (672)
++++++++.++++++++++++.++++++..+++ +.|+|||+++.+++++|+|||+|.|++||.+||||+|++ |.+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~-~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSA-YV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEE-EE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccc-cc
Confidence 567778889999999999999999998888887 999999999999999999999999999999999999999 765 89
Q ss_pred eccCcCCCCcccccC-----CCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005870 181 DQSALTGESLPVTKG-----PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 181 des~LTGEs~pv~k~-----~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+....+ .+++++++..+++..+++++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999988776 44588999999998887655
Q ss_pred HHHHHHHHHHHHhh-ccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhh
Q 005870 255 IAVGMIVEIIVMYP-IQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323 (672)
Q Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~ 323 (672)
+++++++.+++++. ....+|...+..++.+++++||++||++++++...++.+|.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 54444444433322 2566788889999999999999999999999999999999999999999999985
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.92 E-value=8.7e-25 Score=215.86 Aligned_cols=211 Identities=31% Similarity=0.438 Sum_probs=148.9
Q ss_pred ccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCC
Q 005870 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNP 406 (672)
Q Consensus 327 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~ 406 (672)
|++||||||||||++++.+. . .....++..+... ...+.||+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhhh-----hhee
Confidence 68999999999999999981 1 3344444444333 3344578998888764432211 1111 1111
Q ss_pred CCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEE
Q 005870 407 TDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGL 486 (672)
Q Consensus 407 ~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~ 486 (672)
...+...... ++. +. |+++.+....... .............|...+.++.. +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 1111111111 111 22 8888887654211 11122223335666677777653 389999
Q ss_pred eeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeec
Q 005870 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 487 i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999421 3799
Q ss_pred cc--ChhhH--HHHHHHHhhCCCEEEEECCCccCHHHHhhCC
Q 005870 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (672)
Q Consensus 567 ~~--~p~~K--~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 604 (672)
+. +|++| .++++.|+.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.60 E-value=6.6e-15 Score=124.56 Aligned_cols=116 Identities=27% Similarity=0.387 Sum_probs=105.0
Q ss_pred EEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhc
Q 005870 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 482 ~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
...+.++---++=++++++|+.|++. ++++++|||...+....|+-.|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 57778888888899999999999999 99999999999999999999998642
Q ss_pred cCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-c--cccHHHhhccCEEEcC
Q 005870 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTE 626 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g--~~~~~~k~~ad~v~~~ 626 (672)
++++...|+.|.++++.|+++++.|+|+|||.||.+||+.||+||.. + +.++.+.++||+++.+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 57889999999999999999999999999999999999999999976 4 4677788999999854
No 37
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.47 E-value=1.7e-13 Score=140.30 Aligned_cols=67 Identities=21% Similarity=0.214 Sum_probs=58.2
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005870 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|..-++.+.+ ..+.|++||||.||.+||+.||+|+||+||++.+|++||+|+.+++.+|+.++|+.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 45555555543 34679999999999999999999999999999999999999999999999998863
No 38
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.43 E-value=3.7e-13 Score=134.30 Aligned_cols=154 Identities=23% Similarity=0.310 Sum_probs=105.8
Q ss_pred EEeeccCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC-CC-ccc-c---ccc-----ccc----
Q 005870 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PS-SAL-L---GQD-----KDE---- 548 (672)
Q Consensus 485 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~-~~~-~---~~~-----~~~---- 548 (672)
|.+.-.|. +.+.+.++|++|+++|++++++|||+...+..+.+.+|+....+ .+ ..+ . +.. ++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 44444444 78999999999999999999999999999999999999864321 00 000 0 000 000
Q ss_pred ----------------cC------------CC---ccHHHHhhccC--e-------ecccChh--hHHHHHHHHhh----
Q 005870 549 ----------------SI------------AA---LPIDELIEKAD--G-------FAGVFPE--HKYEIVKRLQA---- 582 (672)
Q Consensus 549 ----------------~~------------~~---~~~~~~~~~~~--v-------~~~~~p~--~K~~iv~~l~~---- 582 (672)
.. .. ....+.+++.. + +....|. .|...++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 00 01111111111 0 1122332 36666655543
Q ss_pred CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005870 583 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 583 ~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
..+.++++||+.||.+|++.|++|+||+|+++.+|+.||+|+.+++.+|+.++|+.
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 34679999999999999999999999999999999999999999999999998863
No 39
>PRK10976 putative hydrolase; Provisional
Probab=99.42 E-value=3.9e-13 Score=137.30 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=57.5
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC--EEEcCCChhHHHHHHHH
Q 005870 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad--~v~~~~~~~~i~~~i~~ 638 (672)
.|..-++.+.+ ..+.|++||||.||.+||+.|+.||||+||++.+|++|| .|+.+|+.+|+.++|+.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 46655555543 346799999999999999999999999999999999988 78889999999999863
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.41 E-value=4.8e-13 Score=136.40 Aligned_cols=154 Identities=21% Similarity=0.231 Sum_probs=107.6
Q ss_pred EEeeccCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC---------Ccccccccccc------
Q 005870 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSALLGQDKDE------ 548 (672)
Q Consensus 485 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---------~~~~~~~~~~~------ 548 (672)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++....+. ...+....++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44554555 899999999999999999999999999999999999999752210 00000000000
Q ss_pred -----------------------------------------------cCC----------CccHHHHh---hc-----cC
Q 005870 549 -----------------------------------------------SIA----------ALPIDELI---EK-----AD 563 (672)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (672)
... .....+.. .. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00011110 00 00
Q ss_pred ee-------cccCh--hhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChh
Q 005870 564 GF-------AGVFP--EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (672)
Q Consensus 564 v~-------~~~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~ 630 (672)
.+ ....| .+|...++.+.+. .+.|++|||+.||.+||+.|+.|||||||++.+|+.||+++.+++.+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 22233 3577777666552 34699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 005870 631 VIISAVLT 638 (672)
Q Consensus 631 ~i~~~i~~ 638 (672)
||.++|++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99999875
No 41
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.41 E-value=7.7e-13 Score=135.53 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=57.7
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCE--EEcCCChhHHHHHHH
Q 005870 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~--v~~~~~~~~i~~~i~ 637 (672)
.|..-++.+.+ ..+.|++||||.||++||+.|+.||||+||.+.+|++||+ |+.+++.+|+.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 47666666644 3467999999999999999999999999999999999996 788999999999986
No 42
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.39 E-value=6.1e-13 Score=131.24 Aligned_cols=145 Identities=19% Similarity=0.279 Sum_probs=101.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--Cccccc--cc------cccc------------
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLG--QD------KDES------------ 549 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~--~~~~~~--~~------~~~~------------ 549 (672)
++.+.+.++|++|+++|++++++|||+...+..+++.+++....+. ...+.. .. ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998643220 000000 00 0000
Q ss_pred --C-------------CC---ccHHHHhhccC--e-----ecccC--hhhHHHHHHHHhhC----CCEEEEECCCccCHH
Q 005870 550 --I-------------AA---LPIDELIEKAD--G-----FAGVF--PEHKYEIVKRLQAR----KHICGMTGDGVNDAP 598 (672)
Q Consensus 550 --~-------------~~---~~~~~~~~~~~--v-----~~~~~--p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ 598 (672)
. .. ..+...+.... + +..++ ...|...++.+.+. .+.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 00 00111111111 0 11222 34677777766543 446999999999999
Q ss_pred HHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005870 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 599 al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
|++.|++|+||+|+.+.+|+.||+|+.+++.+|+.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999999999998764
No 43
>PLN02887 hydrolase family protein
Probab=99.33 E-value=4.2e-12 Score=140.34 Aligned_cols=66 Identities=23% Similarity=0.308 Sum_probs=56.9
Q ss_pred HHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005870 573 KYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 573 K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
|..-++.+.+. .+.|++||||.||++||+.||+|||||||.+.+|++||+|+.+|+.+||.++|+.
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 44444444332 3579999999999999999999999999999999999999999999999999873
No 44
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.33 E-value=2.7e-12 Score=101.42 Aligned_cols=67 Identities=39% Similarity=0.545 Sum_probs=60.3
Q ss_pred ccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCc-ccchHHHHHHHHHHhHHHHHHHHHHHHH
Q 005870 18 LENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEE-KKESKFLKFLGFMWNPLSWVMEAAAIMA 84 (672)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (672)
||.++.+++++.|+++ .+||+++|+++|+++||+|+++. +++++|..|+++|++|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 8999999999999966 89999999999999999999965 4577778999999999999999988875
No 45
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.33 E-value=3.7e-12 Score=126.67 Aligned_cols=146 Identities=21% Similarity=0.275 Sum_probs=100.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-ccc--------cccc------------
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSAL-LGQ--------DKDE------------ 548 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--~~~~~-~~~--------~~~~------------ 548 (672)
.+.+.+.++|++|+++|++++++|||+...+..+.+.+|+....+ ....+ ... ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 488899999999999999999999999999999999999643211 00000 000 0000
Q ss_pred -------cC-------------CCccHHHHhhccC---------eecccCh--hhHHHHHHHHhh----CCCEEEEECCC
Q 005870 549 -------SI-------------AALPIDELIEKAD---------GFAGVFP--EHKYEIVKRLQA----RKHICGMTGDG 593 (672)
Q Consensus 549 -------~~-------------~~~~~~~~~~~~~---------v~~~~~p--~~K~~iv~~l~~----~~~~v~~iGDg 593 (672)
.. .......+.+... .+....| ..|...++.+.+ ..+.+++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0000111111110 1112223 367666666544 34679999999
Q ss_pred ccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH----HHHHHH
Q 005870 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 637 (672)
Q Consensus 594 ~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~----i~~~i~ 637 (672)
.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.++ +.++|+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 766664
No 46
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.31 E-value=1.1e-11 Score=127.16 Aligned_cols=66 Identities=23% Similarity=0.326 Sum_probs=56.7
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.|...++.+.+ ..+.+++|||+.||.+|++.|++|+||||+.+.+|+.||+|+.+++.+|+.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 35555554433 3457999999999999999999999999999999999999999999999999986
No 47
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.27 E-value=1.6e-11 Score=124.00 Aligned_cols=66 Identities=23% Similarity=0.194 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005870 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 571 ~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
..|...++.+.+ ..+.++++||+.||.+||+.||.|+||+|+++.+|+.||+++.+++.++|+++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 457666666653 457899999999999999999999999999999999999999988889999875
No 48
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.23 E-value=8.6e-11 Score=119.19 Aligned_cols=62 Identities=18% Similarity=0.175 Sum_probs=52.4
Q ss_pred HHHHhhC--CCEEEEECCCccCHHHHhhCCeeEEccccc---HHHhhc--c-CEEEcCCChhHHHHHHHH
Q 005870 577 VKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 577 v~~l~~~--~~~v~~iGDg~ND~~al~~A~vgIamg~~~---~~~k~~--a-d~v~~~~~~~~i~~~i~~ 638 (672)
.+.++.. .+.++++||+.||.+||+.||+||||+|+. +.+|+. | ++|+.+++.+|+.++++.
T Consensus 185 ~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 185 KQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 3444444 678999999999999999999999999987 478886 4 599999999999999873
No 49
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.20 E-value=6.5e-11 Score=110.67 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=88.1
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHH
Q 005870 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (672)
Q Consensus 499 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (672)
.+|+.|+++|+++.++|+.+...+....+.+|+..-.. ...-.|+--..+++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~----------------------------~~kpkp~~~~~~~~ 92 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE----------------------------GIKKKTEPYAQMLE 92 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe----------------------------cCCCCHHHHHHHHH
Confidence 68999999999999999999999999999999852100 00123455566666
Q ss_pred HHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH
Q 005870 579 RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 579 ~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
.++...+.+++|||+.||.+|++.|++++||+|+.+.++..|++|+.+++.++++
T Consensus 93 ~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 93 EMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHH
Confidence 6666667899999999999999999999999999999999999999877766553
No 50
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.19 E-value=8.5e-11 Score=121.69 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=97.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-----CcccccccccccCCCccHHHHhhccCeec
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----SSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++..... ...++|.... .
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g------------------~ 242 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG------------------D 242 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC------------------c
Confidence 5789999999999999999999999998888888999998531100 0011110000 0
Q ss_pred ccChhhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 567 GVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
-.....|...++.+.++ .+.++++|||.||.+|++.||+|||| |+.+.+++.||+++..++++++...+-
T Consensus 243 iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 243 IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 01235677776666543 46899999999999999999999999 999999999999999999999987764
No 51
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.17 E-value=2.1e-10 Score=117.36 Aligned_cols=63 Identities=21% Similarity=0.202 Sum_probs=51.2
Q ss_pred HHHHHhh---CCCEEEEECCCccCHHHHhhCCeeEEccccc-HH-----HhhccCEEEcCCChhHHHHHHHH
Q 005870 576 IVKRLQA---RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 576 iv~~l~~---~~~~v~~iGDg~ND~~al~~A~vgIamg~~~-~~-----~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
+++.++. ..+.|+++|||.||++||+.|++||||||+. +. .+..||+++...+.+|+.++++.
T Consensus 195 l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 195 LIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred HHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 3344444 5678999999999999999999999999654 22 44579999999999999998873
No 52
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.13 E-value=3e-10 Score=110.11 Aligned_cols=130 Identities=14% Similarity=0.082 Sum_probs=97.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccc-ccccccCCCccHHHHhhccCeecccCh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG-QDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|++........+.+ .... . .....+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t----G------------~~~~~~ 130 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV----G------------YQLRQK 130 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE----C------------eeecCc
Confidence 57899999999999975 9999999999999999999999632111111100 0000 0 001346
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
+.|...++.+++.+..++++|||.||++|++.||+||++.. .+.++++||-...-.+.+.+..++.++
T Consensus 131 ~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~a-k~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 131 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHA-PENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred chHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecC-CHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 78999999998888889999999999999999999999974 556666666554456678888887765
No 53
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.12 E-value=2.5e-10 Score=105.91 Aligned_cols=110 Identities=25% Similarity=0.289 Sum_probs=86.9
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHH
Q 005870 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (672)
+|++|+++|+++.++||++...+..+.+.+|+.... .+ ....|+-...+++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~------~~----------------------~~~k~~~~~~~~~~ 87 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY------QG----------------------QSNKLIAFSDILEK 87 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE------ec----------------------ccchHHHHHHHHHH
Confidence 899999999999999999999999999999985310 00 01123333444454
Q ss_pred HhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH-HHHHHH
Q 005870 580 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAVL 637 (672)
Q Consensus 580 l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~-i~~~i~ 637 (672)
+....+.++|+||+.||.+|++.|+++++|.++.+..+..||+++.++..++ +.++++
T Consensus 88 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 88 LALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 4445678999999999999999999999999999999999999998886555 666654
No 54
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.10 E-value=2.3e-10 Score=116.05 Aligned_cols=65 Identities=23% Similarity=0.273 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005870 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
.|...++.+.+. .+.++++||+.||++|++.|++|+||+|+++.+|+.||+++.+++.+||.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 477777766553 45799999999999999999999999999999999999999999999998764
No 55
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.01 E-value=2.8e-09 Score=109.09 Aligned_cols=67 Identities=24% Similarity=0.291 Sum_probs=55.7
Q ss_pred hHHHHHHHHh----hCC-CEEEEECCCccCHHHHhhCCeeEEcccccHHHh----hcc-CEEE--cCCChhHHHHHHHH
Q 005870 572 HKYEIVKRLQ----ARK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~----~~~-~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k----~~a-d~v~--~~~~~~~i~~~i~~ 638 (672)
.|...++.+. ... +.|+++||+.||++|++.|++|+||+||.+.+| .+| +.++ .+++.+|+.++|+.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 5655555444 456 899999999999999999999999999999999 666 7777 57789999998863
No 56
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.95 E-value=1.6e-09 Score=95.61 Aligned_cols=115 Identities=23% Similarity=0.376 Sum_probs=90.0
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHH
Q 005870 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (672)
Q Consensus 499 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (672)
-.|+.|.+.||++.++|||+...+..-++++||.. +|-. ..+|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eeec--hHhHHHHHH
Confidence 57999999999999999999999999999999951 1111 245655554
Q ss_pred HHh----hCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH----HHHHHHHHHHHHHH
Q 005870 579 RLQ----ARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVLTSRAIFQR 645 (672)
Q Consensus 579 ~l~----~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~----i~~~i~~gr~~~~~ 645 (672)
.|. -..+.|+++||..||.|+|+..+.++|+.++++..++.||+|+..+.-.+ +.+.|..++..++-
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 443 34568999999999999999999999999999999999999998765333 44455555554443
No 57
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.94 E-value=2.4e-09 Score=83.27 Aligned_cols=59 Identities=41% Similarity=0.617 Sum_probs=52.4
Q ss_pred HcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005870 29 NLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (672)
Q Consensus 29 ~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 87 (672)
.|+++ ..||+.+|+++|+++||.|+++.++ .++|..|+++|++|+.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 36677 4599999999999999999998876 77788999999999999999999998875
No 58
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.89 E-value=4.3e-09 Score=102.59 Aligned_cols=114 Identities=23% Similarity=0.247 Sum_probs=85.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC-----cccccccccccCCCccHHHHhhccCee
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-----SALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
.++.|++.+.++.++++|.+|+++||-...-+..+++.+|++...... ..++|. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~-------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR-------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece-------------------ee
Confidence 578999999999999999999999999999999999999997532111 112221 22
Q ss_pred cc-cChhhHHHHHHHHhhC-C---CEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEE
Q 005870 566 AG-VFPEHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624 (672)
Q Consensus 566 ~~-~~p~~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~ 624 (672)
.. +..+.|...++.+... | +.+.++|||.||.|||+.||.++++.. .+..+..|+...
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~-~~~l~~~a~~~~ 199 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNP-KPKLRALADVRI 199 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCc-CHHHHHHHHHhc
Confidence 22 3346787777555443 3 469999999999999999999999964 444555666544
No 59
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.86 E-value=1.1e-08 Score=97.96 Aligned_cols=103 Identities=24% Similarity=0.335 Sum_probs=81.4
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH----
Q 005870 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY---- 574 (672)
Q Consensus 499 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~---- 574 (672)
.+|+.|+++|+++.++||++...+..+++.+|+... |. ..+.|.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998521 11 012233
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH
Q 005870 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
.+++.++...+.++|+||+.||.+|++.|+++++++++.+..+..||+++..+.-++..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~ 161 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAV 161 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHH
Confidence 33344444456899999999999999999999999988888899999999765544443
No 60
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.86 E-value=5.9e-09 Score=104.35 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=58.5
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC----EEEcCCChhHHHHHHHH
Q 005870 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad----~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.++ ...++++||+.||.+|++.++.||+|+|+.+.+|+.|| +|+.+++.+|+.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 577777766543 34699999999999999999999999999999999999 88888999999999874
No 61
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.86 E-value=8.6e-09 Score=101.94 Aligned_cols=128 Identities=20% Similarity=0.235 Sum_probs=91.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc-cccccccCCCccHHHHhhccCeecc-cC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-GQDKDESIAALPIDELIEKADGFAG-VF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~-~~ 569 (672)
++.|++++.++.|+++|+++.++||.....+..+.+.+|+.... ...... +..... .+... ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~-~~~~~~~~~~~~~--------------~~~~~~~~ 149 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF-ANRLEVEDGKLTG--------------LVEGPIVD 149 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-eeEEEEECCEEEE--------------EecCcccC
Confidence 57899999999999999999999999999999999999986311 100000 000000 00011 11
Q ss_pred hhhHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHH
Q 005870 570 PEHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 570 p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~ 635 (672)
+..|..+++.+.+ ..+.++++||+.||.+|++.||++++++ +.+.++++||+++.++++..+...
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 2235555554433 3356999999999999999999999985 568888999999999888776543
No 62
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.71 E-value=5.6e-08 Score=98.09 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=99.5
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--C--CCccc-ccc-cc-cc--------------
Q 005870 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y--PSSAL-LGQ-DK-DE-------------- 548 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~--~~~~~-~~~-~~-~~-------------- 548 (672)
..+..|...+++++++++|+.++++|||+...+..+.+++++..+. + ....+ .+. .. +.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456789999999999999999999999999999999988876431 1 00000 000 00 00
Q ss_pred ---------c-----------------CCCcc----H---HHHhhcc--Ce---e-----cccCh--hhHHHHHHHHhhC
Q 005870 549 ---------S-----------------IAALP----I---DELIEKA--DG---F-----AGVFP--EHKYEIVKRLQAR 583 (672)
Q Consensus 549 ---------~-----------------~~~~~----~---~~~~~~~--~v---~-----~~~~p--~~K~~iv~~l~~~ 583 (672)
. ..... + .+.+... .+ + ....| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 00000 1 1111110 11 1 12233 4577777776543
Q ss_pred ----CCEEEEECCCccCHHHHhh-CCeeEEcccccHHHhhccC-------EEEcCCChhHHHHHHHH
Q 005870 584 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 584 ----~~~v~~iGDg~ND~~al~~-A~vgIamg~~~~~~k~~ad-------~v~~~~~~~~i~~~i~~ 638 (672)
.+.|+++||+.||.+|++. ++.|++|+|+.+.+|+.++ +++....-+|+.++++.
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4689999999999999998 6799999999999997654 77777788999998864
No 63
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.68 E-value=3.9e-08 Score=82.10 Aligned_cols=65 Identities=31% Similarity=0.404 Sum_probs=52.3
Q ss_pred ccchHHHHHHhhcCC------hHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC
Q 005870 374 NQDAIDAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN 439 (672)
Q Consensus 374 ~~~~~~~ai~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~ 439 (672)
.++|.|.|++.+... ....+..++.++.+||+|++|||++++. .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 456788888776532 3456678999999999999999999987 3345777999999999999974
No 64
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.68 E-value=1.7e-07 Score=91.66 Aligned_cols=128 Identities=18% Similarity=0.168 Sum_probs=89.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++ +++.++|+.....+..+.+.+|+...........++..- . . .....|.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i---~---------~---~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI---T---------G---YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE---E---------C---ccccccc
Confidence 4679999999999999 999999999999999999999985311110000000000 0 0 0012367
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCE-EEcCCChhHHHHHHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~-v~~~~~~~~i~~~i~ 637 (672)
.|...++.++..+..++|+|||.||.+|.+.||+|++.+...+.....+++ ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 788888888888899999999999999999999999887544444455665 43 44555555443
No 65
>PLN02382 probable sucrose-phosphatase
Probab=98.58 E-value=2.4e-07 Score=99.77 Aligned_cols=146 Identities=18% Similarity=0.140 Sum_probs=93.4
Q ss_pred CCcchHHHH-HHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC----CC-cccccccc--------------------
Q 005870 493 PRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----PS-SALLGQDK-------------------- 546 (672)
Q Consensus 493 ~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~----~~-~~~~~~~~-------------------- 546 (672)
+.+...+++ +++++.|+.++++|||++.....+.++.++..+.+ .. .+..+...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 444455666 88999999999999999999999999998765421 00 00000000
Q ss_pred ---------------ccc-------CCCcc-------HHHHhhc----cC------eecccCh--hhHHHHHHHHhhC--
Q 005870 547 ---------------DES-------IAALP-------IDELIEK----AD------GFAGVFP--EHKYEIVKRLQAR-- 583 (672)
Q Consensus 547 ---------------~~~-------~~~~~-------~~~~~~~----~~------v~~~~~p--~~K~~iv~~l~~~-- 583 (672)
+.. ..... +.+.+.. .. .+..+.| ..|...++.|.+.
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 00000 1111110 01 1223334 3487777766543
Q ss_pred -----CCEEEEECCCccCHHHHhhCC-eeEEcccccHHHhhcc--------CEEEc-CCChhHHHHHHHH
Q 005870 584 -----KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVIISAVLT 638 (672)
Q Consensus 584 -----~~~v~~iGDg~ND~~al~~A~-vgIamg~~~~~~k~~a--------d~v~~-~~~~~~i~~~i~~ 638 (672)
.+.++++||+.||++||+.|+ .||||+|+.+.+|+.+ ++++. +++-+||.++|+.
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 458999999999999999999 6999999999999743 55533 6678999998864
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.50 E-value=4.3e-07 Score=88.40 Aligned_cols=117 Identities=26% Similarity=0.362 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
+++|++.+.|+.|++.|+++.++|+.....+..+++.+|+... +......... ..... ..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~--g~~~p----------~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDEK--GFIQP----------DGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcCC--CeEec----------ceeeEEccc
Confidence 5789999999999999999999999999999999999997521 1111110000 00000 011123355
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC
Q 005870 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad 621 (672)
.|...++.+.+ ..+.++++||+.||.+|++.||++++++......+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 67666555433 345799999999999999999999999754554555554
No 67
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.49 E-value=9.5e-07 Score=86.94 Aligned_cols=139 Identities=13% Similarity=0.050 Sum_probs=87.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-CcccccccccccCCCccHHHHhhccCee-ccc
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SSALLGQDKDESIAALPIDELIEKADGF-AGV 568 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 568 (672)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....... ...+.+..+...... ..... ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~--------~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH--------PCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC--------CCccccccC
Confidence 36899999999999999999999999999888888887754322211 111222211100000 00000 011
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
....|..+++.++...+.++|+|||.||.+|++.||+.+|-+.-.+..++.---...=++|..+...++
T Consensus 141 cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 135689999998888888999999999999999999988865322222211111122255777776664
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.48 E-value=2.1e-07 Score=85.26 Aligned_cols=114 Identities=21% Similarity=0.260 Sum_probs=82.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc--------cccccccccCCCccHHHHhhccC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA--------LLGQDKDESIAALPIDELIEKAD 563 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 563 (672)
.+.|++++.++.|++.|.++.++||--...+..++.++||+...+.... +.|-+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 4679999999999999999999999999999999999999853322211 11111000
Q ss_pred eecccChhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhCCeeEEcc-c-ccHHHhhccCE
Q 005870 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARSASDI 622 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgIamg-~-~~~~~k~~ad~ 622 (672)
.-.....|..++..+++. -+.++|+|||.||.+|+.-|+.=|+.+ + -.+.+|..|+.
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~ 213 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKW 213 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHH
Confidence 011134688888888774 457999999999999999988888775 3 33445555543
No 69
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.44 E-value=0.0001 Score=79.39 Aligned_cols=184 Identities=20% Similarity=0.237 Sum_probs=121.0
Q ss_pred CeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC-----------CCc-------cc
Q 005870 480 PWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSS-------AL 541 (672)
Q Consensus 480 ~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-----------~~~-------~~ 541 (672)
+-.|+|++....+.+++....|+.|-++-|+.+-.|-.+....+-+|+++||..... +.. ..
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 347999999999999999999999999999999999999999999999999853111 000 00
Q ss_pred cc-------------------ccccc-----------cC--------CCccHHHH-------------hh----ccCeec
Q 005870 542 LG-------------------QDKDE-----------SI--------AALPIDEL-------------IE----KADGFA 566 (672)
Q Consensus 542 ~~-------------------~~~~~-----------~~--------~~~~~~~~-------------~~----~~~v~~ 566 (672)
.+ ..++. .+ ....+.++ ++ -...|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 00 00000 00 00000000 00 112578
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHH--HHhhCCeeEEccccc-------------HH-HhhccC---------
Q 005870 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAP--ALKKADIGIAVADAT-------------DA-ARSASD--------- 621 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~--al~~A~vgIamg~~~-------------~~-~k~~ad--------- 621 (672)
.++|+.-.++++.+|+.|++|+.+|...|-.. .+-+||++||+..-. .. ..++.|
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 89999999999999999999999999988543 457889999874210 01 111222
Q ss_pred --------EEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 005870 622 --------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVS 663 (672)
Q Consensus 622 --------~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~ 663 (672)
+-......-.+..+|+-+|.....+|+.+.|.+.....+.+.
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi 1103 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVI 1103 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 111111122355677889998999999988887766665443
No 70
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.37 E-value=2e-06 Score=85.18 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=36.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
..+.++++|+.|+++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4445899999999999999999999999999999999986
No 71
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.35 E-value=2.2e-06 Score=84.66 Aligned_cols=135 Identities=12% Similarity=0.031 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--CcccccccccccCCCccHHHHhhccCeecccC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +....+. ...+.++............ -+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~-------~~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDE-------HCQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccc-------cccccC
Confidence 57899999999999999999999999998888888887 6431111 1111221111000000000 000000
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhh--ccCEEEcCCChhHHHHHH
Q 005870 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~--~ad~v~~~~~~~~i~~~i 636 (672)
...|..+++.++.....++|+|||.||++|.+.||+.++-+.-.+.+++ .+.+.. ++|..+...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1347889998888878899999999999999999997774321122222 233333 4466665554
No 72
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.34 E-value=1.6e-06 Score=85.77 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=41.5
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005870 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
|.+.-.+...+++.++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 8 GTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 8 GTLLPPGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 3333345667789999999999999999999999999999999999853
No 73
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.32 E-value=1.4e-06 Score=88.62 Aligned_cols=140 Identities=11% Similarity=0.092 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHh-CCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc---c-------------------------
Q 005870 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL---L------------------------- 542 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~---~------------------------- 542 (672)
.+.++++++|+.|++ .|+.++++|||+...+..+.+.+++.-...+...+ .
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 79999999999999988887766542000000000 0
Q ss_pred ---cccccc----------cCCC--ccHHHH----hhccC--------eecccCh--hhHHHHHHHHhhC----CCEEEE
Q 005870 543 ---GQDKDE----------SIAA--LPIDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (672)
Q Consensus 543 ---~~~~~~----------~~~~--~~~~~~----~~~~~--------v~~~~~p--~~K~~iv~~l~~~----~~~v~~ 589 (672)
|..++. .... ..+..+ .+... .+..+.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0000 000000 00110 1112223 3677777765443 467999
Q ss_pred ECCCccCHHHHhhC----CeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 590 iGDg~ND~~al~~A----~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+||+.||.+||+.+ +.||+||++.+ .|++.+. +-+.+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCC--CHHHHHHHHH
Confidence 99999999999999 99999998753 4677774 4566665554
No 74
>PLN02954 phosphoserine phosphatase
Probab=98.31 E-value=5.4e-06 Score=82.21 Aligned_cols=124 Identities=21% Similarity=0.291 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcc-------cccccccccCCCccHHHHhhccC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSA-------LLGQDKDESIAALPIDELIEKAD 563 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 563 (672)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+.. +.+.... +.|.... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~---------------~ 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN---------------E 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC---------------C
Confidence 367999999999999999999999999999999999999863 1111100 1110000 0
Q ss_pred eecccChhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhh--CCeeEEcccc--cHHHhhccCEEEcCCChhHHHH
Q 005870 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~--A~vgIamg~~--~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
. ...+..|...++.+... .+.++++||+.||+.|.+. ++++++.|.. .+.....+|+++. ++..+..
T Consensus 149 ~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 149 P--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred c--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 0 00123466666665543 3579999999999999888 4555655532 2334556899884 4555544
No 75
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.31 E-value=5e-06 Score=82.14 Aligned_cols=126 Identities=18% Similarity=0.194 Sum_probs=92.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
..+-|++++++..|+++|++..++|+++...+..+.+..|+...... ++.+... ....-.|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~--i~g~~~~-----------------~~~KP~P 148 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV--IVGGDDV-----------------PPPKPDP 148 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--EEcCCCC-----------------CCCCcCH
Confidence 45679999999999999999999999999999999999998643211 1111111 1122346
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCC---eeEEccc--ccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~---vgIamg~--~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.....+++.+....+.++||||..+|+.|-+.|| +|+..|. ........+|+++ +++..+...+.
T Consensus 149 ~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 149 EPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 6667777777776558999999999999999999 6777773 3445556699998 44666665543
No 76
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.29 E-value=6.1e-06 Score=81.87 Aligned_cols=128 Identities=16% Similarity=0.136 Sum_probs=90.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ..++.+.... .....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 357899999999999999999999999999888999999985321 1111111100 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEccc----ccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~----~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
+--..+++.++...+.++++||+.||+.|.+.||+ +|.+.. ..+.....+++++ +++..+...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 33356667777677889999999999999999999 555532 2334445788888 6688888777643
No 77
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.26 E-value=1.1e-06 Score=84.78 Aligned_cols=92 Identities=24% Similarity=0.301 Sum_probs=68.4
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh-h-
Q 005870 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE-H- 572 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-~- 572 (672)
+++.+.|+.++++|++++++||.+...+..+++.+|++...+....+.... ......+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999974211111110000 01123444444 3
Q ss_pred -HHHHHHHH------hhCCCEEEEECCCccCHHHHh
Q 005870 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (672)
Q Consensus 573 -K~~iv~~l------~~~~~~v~~iGDg~ND~~al~ 601 (672)
|...++.+ +.....++++|||.||.+|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 456789999999999999996
No 78
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.19 E-value=1.1e-05 Score=78.93 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+.... ..++..++. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 57799999999999999999999999988888888888885321 111111110 01222343
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---cc--ccHHHhhccCEEEcCCChhHHHHHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---AD--ATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g~--~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++...+.++||||+.+|+.+-+.||+.... |. ..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 34566666766678899999999999999999997542 32 2234566789987 4465555443
No 79
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.11 E-value=5.6e-06 Score=78.75 Aligned_cols=98 Identities=20% Similarity=0.217 Sum_probs=68.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCee--cccCh
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF--AGVFP 570 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~p 570 (672)
++|++.+.++.+++.|++++++||.....+..+++.+|+... +.......++ ..+.. .+. ....+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~~~--g~~~g----------~~~~~~~~~~ 140 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFDDN--GLLTG----------PIEGQVNPEG 140 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEECCC--CEEeC----------ccCCcccCCc
Confidence 579999999999999999999999999999999999998631 1110000000 00000 000 12345
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhC
Q 005870 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 571 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A 603 (672)
..|...++.+... .+.++++|||.||.+|++.|
T Consensus 141 ~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 141 ECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred chHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 7788888876543 45699999999999999875
No 80
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.10 E-value=1e-05 Score=77.71 Aligned_cols=113 Identities=15% Similarity=0.065 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc-cCh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG-VFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~p 570 (672)
++.|++.+.++.|++.|+++.++|+........+.+..|+.... ..++........ ...+.....++..+.. ...
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~--~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN--DGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC--CCcEEEecCCCCccCcCCCC
Confidence 67899999999999999999999999999999988888875321 111111100000 0000000000111111 112
Q ss_pred hhHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeEE
Q 005870 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 571 ~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
..|..+++.++.+ .+.++++|||.||+.|.+.||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3588899998887 8899999999999999999987655
No 81
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.09 E-value=9.8e-06 Score=78.93 Aligned_cols=102 Identities=18% Similarity=0.145 Sum_probs=74.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC------CcccccccccccCCCccHHHHhhccCe
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP------SSALLGQDKDESIAALPIDELIEKADG 564 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (672)
.+++|++.+.++.+++.|++++++||.....+..+++.+|+..-... +..++|...
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~------------------ 147 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID------------------ 147 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc------------------
Confidence 46789999999999999999999999999999999999998632111 001111100
Q ss_pred ecccChhhHHHHHHHHhh-C---CCEEEEECCCccCHHHHhhCCeeEEcc
Q 005870 565 FAGVFPEHKYEIVKRLQA-R---KHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~-~---~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
-..+.++.|...++.+.. . .+.++++||+.+|.+|++.||.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012335677776665543 2 346899999999999999999999886
No 82
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.05 E-value=1.2e-05 Score=89.33 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=40.5
Q ss_pred EEeeccCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005870 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 485 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
|.+.-.|. +.+.+.++|++|+++|+.++++|||+...+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55554333 5568899999999999999999999999999999999974
No 83
>PTZ00174 phosphomannomutase; Provisional
Probab=98.05 E-value=1.5e-05 Score=80.34 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CccCHHHHhhC-CeeEEcccccHHHhhccCEEE
Q 005870 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~A-~vgIamg~~~~~~k~~ad~v~ 624 (672)
.+|..-++.|.+..+.|++||| |.||.+||+.| -.|++++|+++.+|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4688888888777889999999 99999999976 577777799999998776543
No 84
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.02 E-value=1.9e-05 Score=70.91 Aligned_cols=117 Identities=15% Similarity=0.074 Sum_probs=75.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005870 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
...++.+++.+.++.|+++|++++++||+....+....+.+|+.... ..++........ ................+-
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAIY-YPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhhh-cccccccccccccccCCC
Confidence 34578999999999999999999999999999999999999874211 111110000000 000000000011123345
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhh-CCeeEE
Q 005870 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~-A~vgIa 608 (672)
.|..+..+.+.+....+.++++||+.||+.|++. ..-+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5666677777777667889999999999999998 444443
No 85
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.99 E-value=4.5e-05 Score=77.87 Aligned_cols=126 Identities=15% Similarity=0.156 Sum_probs=85.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++.|++.++|+.|+++|+++.++||.+...+..+.+..|+.... ..++.++... .....|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 367899999999999999999999999988888888888875321 1111111100 111122
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEc--c-c-ccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV--A-D-ATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iam--g-~-~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+--..+++.++...+.+++|||+.||+.|.+.||+. +++ | + ..+..+..+|+++ +++..+.+++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 223455566665667899999999999999999973 444 3 2 2233445789888 45777776544
No 86
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.96 E-value=4.6e-05 Score=74.95 Aligned_cols=124 Identities=19% Similarity=0.156 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.... ..++..+... .....|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999999988889999985321 1111111100 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE---ccc-ccH-HHhhccCEEEcCCChhHHHHHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA---VAD-ATD-AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa---mg~-~~~-~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--.++++.++...+.+++|||+.+|+.|-+.||+-.. -|. ..+ .....+|+++ +++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 4456666666666789999999999999999998533 332 222 2344588887 4566666554
No 87
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.93 E-value=5.2e-05 Score=76.02 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
+...+.+.++|++|+++||.++++||+.......+.+++++..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4467789999999999999999999999999999999999864
No 88
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.93 E-value=4.6e-05 Score=74.83 Aligned_cols=121 Identities=14% Similarity=0.121 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+.... ..++.+++.. ..+..|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999998999999999985321 1111111100 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---ccc-c-HHHhhccCEEEcCCChhHHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADA-T-DAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g~~-~-~~~k~~ad~v~~~~~~~~i~ 633 (672)
-=..+++.++...+.++++||+.||+.|.+.||+.... |.. . +.....||+++ +++..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 33555666666667899999999999999999987653 221 1 22234688887 3455443
No 89
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.83 E-value=8.5e-05 Score=73.52 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=81.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
-++-|++.++|+.|++.|+++.++|+........+.+.+|+.... ..++.+.... ..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 357799999999999999999999999999999999999986432 1111111100 122233
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-c---ccHHHhhccCEEEcCCChhHHH
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-D---ATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~---~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
+-=..+.+.++...+.++++||+.||+.+.+.||+....- . ..+.-...+|+++. ++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 3334455555555677999999999999999999876553 2 22222345777763 354443
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.81 E-value=0.00011 Score=72.99 Aligned_cols=124 Identities=13% Similarity=0.103 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+.... ..++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 46799999999999999999999999988888888888875321 111111110 01223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE-c--cc--ccH-HHhhccCEEEcCCChhHHHHHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--AD--ATD-AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa-m--g~--~~~-~~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++...+.++||||+.||+.|-+.||+... + |. ..+ .....+|+++ +++..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 4466777777777889999999999999999998753 2 21 111 2234589988 4466665544
No 91
>PRK08238 hypothetical protein; Validated
Probab=97.80 E-value=0.00011 Score=80.50 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+.+. ++.++. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC-------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111111 1134456
Q ss_pred hHHHHHH-HHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHH
Q 005870 572 HKYEIVK-RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA 615 (672)
Q Consensus 572 ~K~~iv~-~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~ 615 (672)
.|...+. .+.+ +.+.++||+.||.+|++.|+-.++++.+...
T Consensus 128 ~K~~~l~~~l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 128 AKAAALVEAFGE--RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred hHHHHHHHHhCc--cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 6655444 3332 2267899999999999999999999855443
No 92
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.78 E-value=0.00017 Score=71.29 Aligned_cols=124 Identities=17% Similarity=0.171 Sum_probs=82.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.. ..++.+.+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 3688999999999999999999999999999999999998751 111 1222221110 11223
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeEE--cccc---cHHH-hhccCEEEcCCChhHHHH
Q 005870 570 PEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA--VADA---TDAA-RSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 570 p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgIa--mg~~---~~~~-k~~ad~v~~~~~~~~i~~ 634 (672)
|+-=...++.+... .+.+++|||+.+|+.+-+.||+..+ +..+ .+.. ...+|+++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 33334555666554 4789999999999999999999863 3222 2222 23477777 34555443
No 93
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.72 E-value=6.9e-05 Score=75.27 Aligned_cols=68 Identities=21% Similarity=0.228 Sum_probs=48.8
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHH-----Hhhcc---C-EEEcCCChhHHHHHHH
Q 005870 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSAS---D-IVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~-----~k~~a---d-~v~~~~~~~~i~~~i~ 637 (672)
..|...++.++.+ .+.|+++||+.||.+||..++-||.++|+.++ ..... . +....+.-.||.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5688888887765 35688899999999999999999999999887 32222 2 5666777888888876
Q ss_pred H
Q 005870 638 T 638 (672)
Q Consensus 638 ~ 638 (672)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
No 94
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.71 E-value=0.00035 Score=81.50 Aligned_cols=172 Identities=16% Similarity=0.155 Sum_probs=101.2
Q ss_pred HHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeec--cCCCCcchHHHHHHHHh-CCCcEEEEcCCcHHHHH
Q 005870 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGK 523 (672)
Q Consensus 447 ~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~--~d~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~ 523 (672)
.+.....|...-.|.+++-+.. +++....- ...+.+++.++|++|.+ .|+.|+++|||+.....
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~ 546 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLE 546 (726)
T ss_pred HHHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHH
Confidence 3445566666667888776654 43332110 12367899999999999 59999999999998887
Q ss_pred HHHHHhCCCCCCCCCccc--ccccccccC---------------------------------------CCccH-------
Q 005870 524 ETGRRLGMGTNMYPSSAL--LGQDKDESI---------------------------------------AALPI------- 555 (672)
Q Consensus 524 ~ia~~~gi~~~~~~~~~~--~~~~~~~~~---------------------------------------~~~~~------- 555 (672)
.....+++.--..+...+ .+....... ...++
T Consensus 547 ~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~ 626 (726)
T PRK14501 547 RWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANE 626 (726)
T ss_pred HHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHH
Confidence 766544431000000000 000000000 00000
Q ss_pred -HHHhh----ccC--e-----ecccCh--hhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhC---CeeEEcccccHHH
Q 005870 556 -DELIE----KAD--G-----FAGVFP--EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAA 616 (672)
Q Consensus 556 -~~~~~----~~~--v-----~~~~~p--~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A---~vgIamg~~~~~~ 616 (672)
.+.+. ... + +..+.| .+|...++.+.+. ...++++||+.||.+||+.+ +.+|+||++
T Consensus 627 l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---- 702 (726)
T PRK14501 627 LILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---- 702 (726)
T ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----
Confidence 00010 000 0 112223 4688888887764 35899999999999999996 689999885
Q ss_pred hhccCEEEcCCChhHHHHHHH
Q 005870 617 RSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 617 k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+.+|++.+.++ +.+...++
T Consensus 703 ~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 703 ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCcceEeCCCH--HHHHHHHH
Confidence 45788988654 55666655
No 95
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.70 E-value=0.00033 Score=71.41 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.+.|+.|++.|+++.++||.....+..+.+..|+..... ..++.+++.. ..+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 467899999999999999999999999988887777777643211 1222221110 1122333
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCe
Q 005870 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI 605 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v 605 (672)
-=...++.+... .+.++||||+.+|+.+-+.||+
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 334555566543 4679999999999999999997
No 96
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.67 E-value=0.00034 Score=70.74 Aligned_cols=98 Identities=15% Similarity=0.073 Sum_probs=70.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.+.++.|+++|+++.++|+.....+..+.+.+|+..... ..++.+++.. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 457899999999999999999999999999998888888764321 2222222111 1222344
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeE
Q 005870 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=...++.+... .+.++||||+.+|+.+-+.||+-.
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 335556666643 567999999999999999999754
No 97
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.65 E-value=0.00012 Score=71.51 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g 530 (672)
++.+.+.++|++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999888754
No 98
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.64 E-value=0.00084 Score=67.57 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=82.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC----------CCcccccccccccCCCccHHHHhh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------PSSALLGQDKDESIAALPIDELIE 560 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 560 (672)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..... ....+.|...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~-------------- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG-------------- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC--------------
Confidence 3679999999999999999999999999999999999999853221 0111212100
Q ss_pred ccCeecccChhhHHHHH-----HHHh--hCCCEEEEECCCccCHHHHhhC---CeeEEcc--ccc-H----HHhhccCEE
Q 005870 561 KADGFAGVFPEHKYEIV-----KRLQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-D----AARSASDIV 623 (672)
Q Consensus 561 ~~~v~~~~~p~~K~~iv-----~~l~--~~~~~v~~iGDg~ND~~al~~A---~vgIamg--~~~-~----~~k~~ad~v 623 (672)
. -+....|...+ +.++ .....|+++|||.||++|..-. .--+.+| |.. + .-+++=|+|
T Consensus 186 --P---~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 --P---LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred --C---cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0 00112344333 2333 3456799999999999997654 2234444 432 2 234678999
Q ss_pred EcCCChhHHHHHH
Q 005870 624 LTEPGLSVIISAV 636 (672)
Q Consensus 624 ~~~~~~~~i~~~i 636 (672)
+.++.--.++.+|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9987655555544
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.61 E-value=0.00043 Score=70.08 Aligned_cols=116 Identities=18% Similarity=0.114 Sum_probs=80.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999998889885321 1222222111 1222343
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE-Ec-ccccHHHhhccCEEEcC
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI-am-g~~~~~~k~~ad~v~~~ 626 (672)
-=...++.++...+.++||||+.+|+.+-+.||+-. ++ |.........+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 335666777766778999999999999999999854 33 32222233457888743
No 100
>PRK11590 hypothetical protein; Provisional
Probab=97.58 E-value=0.00035 Score=68.53 Aligned_cols=106 Identities=13% Similarity=0.030 Sum_probs=74.2
Q ss_pred CCCcchHHHH-HHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCe-ecccC
Q 005870 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG-FAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~ 569 (672)
.+.|++.+.| +.+++.|++++++|+.....+..+++.+|+.. . ..+.+..++.... ..+ -..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~---~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-R---VNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-c---CceEEEEEEEEEc----------cEECCccCC
Confidence 3479999999 57888999999999999999999999998621 0 0111222211000 001 12355
Q ss_pred hhhHHHHHHHH-hhCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005870 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 570 p~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
.++|..-++.. ........+-||+.||.|||+.|+.+++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 67888776644 4445566789999999999999999999963
No 101
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.57 E-value=0.00054 Score=69.00 Aligned_cols=117 Identities=12% Similarity=0.133 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+.... ..++.+++.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1222222211 1223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---ccccHH-HhhccCEEEcCC
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDA-ARSASDIVLTEP 627 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g~~~~~-~k~~ad~v~~~~ 627 (672)
--...++.++...+.+++|||+.+|+.+-+.||+-... |...+. ....+|+++.+-
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 44666677776678899999999999999999986443 222222 234688888553
No 102
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.49 E-value=0.00078 Score=68.64 Aligned_cols=121 Identities=12% Similarity=0.091 Sum_probs=82.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.+.++.|++.|+++.++|+.....+....+.+|+..... .++.+++. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCCC------------------C--CCHH
Confidence 467999999999999999999999999999999999999853211 11111110 0 0122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---c-cccH-HHhhccCEEEcCCChhHHHHHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---A-DATD-AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g-~~~~-~~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++...+.+++|||+.+|+.+-+.||+-... | +..+ .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 22334445555567899999999999999999987543 3 2222 2234689988 4566666644
No 103
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.48 E-value=0.00048 Score=67.32 Aligned_cols=106 Identities=12% Similarity=0.035 Sum_probs=73.5
Q ss_pred CCCcchHHHHH-HHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~-~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.+.|++.+.|+ .+++.|++++++|+-+...+..+++..++... .. +.+..++.. .... ..-..+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~-~i~t~le~~-~gg~--------~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LN-LIASQIERG-NGGW--------VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---Cc-EEEEEeEEe-CCce--------EcCccCCC
Confidence 46899999996 78889999999999999999999988665321 01 112222110 0000 01123556
Q ss_pred hhHHHHHHH-HhhCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005870 571 EHKYEIVKR-LQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 571 ~~K~~iv~~-l~~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
++|..-++. +........+-||+.||.|||+.||.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 788876664 3433445678999999999999999999996
No 104
>PRK11587 putative phosphatase; Provisional
Probab=97.40 E-value=0.00091 Score=65.94 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+.. ...++.++... ...-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc-----------------CCCCCcH
Confidence 467999999999999999999999988766666666677631 11122111110 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEccccc-HHHhhccCEEEcC
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~~-~~~k~~ad~v~~~ 626 (672)
-=...++.+....+.+++|||+.+|+.+-+.||+. |++.++. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 34555666766678899999999999999999985 5554332 2223457877643
No 105
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.38 E-value=0.00068 Score=66.91 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=68.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+++|++++++|+-+...+....+.+|+.... ..++.+.+.. ..+-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEEG-----------------VEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccCC-----------------CCCCCHH
Confidence 46799999999999999999999999888788888888875321 1112111110 1122333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeE
Q 005870 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgI 607 (672)
-=..+++.+....+.+++|||.. +|+.+-+.||+-.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEE
Confidence 33455566665667899999998 9999999999843
No 106
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.34 E-value=0.00073 Score=65.48 Aligned_cols=93 Identities=18% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
+++.+...++++.|++.|+++.++||.+...+..+.+.+|+.... ..++.+++ +..+..|
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~p 164 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPNP 164 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcCH
Confidence 446677799999999999999999999999999999999985321 11111111 1113445
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhC
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 603 (672)
+--..+++.++...+.+++|||+.+|+.+-+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 555666777777778899999999999987764
No 107
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.33 E-value=0.00091 Score=68.80 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=76.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+......+-+..+.......-..+.+.+.. ..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 46799999999999999999999999887777665555321100000111111100 1222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cc--cHHHhhccCEEEcC
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DA--TDAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~--~~~~k~~ad~v~~~ 626 (672)
-=..+++.+....+.++||||+.+|+.|-+.||+..... .+ ++.....+|+++.+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 345666777766778999999999999999999876553 22 22112358888743
No 108
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.29 E-value=0.0027 Score=60.13 Aligned_cols=146 Identities=19% Similarity=0.200 Sum_probs=90.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccccccc-------cc------CCCccHHHH
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD-------ES------IAALPIDEL 558 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~ 558 (672)
.+-|++.++++.|++.= ..+++|-.-.+-+..+|..+|++........+.-++.. +. .....-+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 35699999999998754 44555656667788999999985322211111000000 00 000011111
Q ss_pred hhcc-CeecccChhhHHHH---------------HHHHhhC---CCEEEEECCCccCHHHHhhCC-ee-EEcc-cccHHH
Q 005870 559 IEKA-DGFAGVFPEHKYEI---------------VKRLQAR---KHICGMTGDGVNDAPALKKAD-IG-IAVA-DATDAA 616 (672)
Q Consensus 559 ~~~~-~v~~~~~p~~K~~i---------------v~~l~~~---~~~v~~iGDg~ND~~al~~A~-vg-Iamg-~~~~~~ 616 (672)
.++. .+|.|..|.+-.++ ++.+... ....+++||++.|+.||+.+. -| +|+. ||.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 1111 25778877654444 4433332 234788999999999999873 33 7776 888888
Q ss_pred hhccCEEEcCCChhHHHHHHHH
Q 005870 617 RSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 617 k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
...||+.+.+.+..++...|+.
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8899999988888888877764
No 109
>PLN02580 trehalose-phosphatase
Probab=97.26 E-value=0.0016 Score=68.67 Aligned_cols=63 Identities=21% Similarity=0.143 Sum_probs=46.6
Q ss_pred hhHHHHHHHHhhC-C---C---EEEEECCCccCHHHHhh-----CCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 571 EHKYEIVKRLQAR-K---H---ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~-~---~---~v~~iGDg~ND~~al~~-----A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.+|...++.+.+. + . .++++||+.||.+||+. +++||+||++.+.. .|++.+. +-+.+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcC--CHHHHHHHHH
Confidence 3788888777544 2 1 24899999999999996 69999999876533 5788774 4666766664
No 110
>PRK06769 hypothetical protein; Validated
Probab=97.23 E-value=0.0014 Score=62.11 Aligned_cols=99 Identities=9% Similarity=-0.003 Sum_probs=62.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH--------HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCe
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG 564 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (672)
+-|+++++++.|++.|+++.++|+.+.. ......+..|+..-. ......++.. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-ECcCCCCCCC-----------------C
Confidence 5799999999999999999999987631 122223445553110 0000000000 0
Q ss_pred ecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
..+-.|+-=..+++.++...+.++||||..+|+.+-+.||+-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 122234333566666666667899999999999999999987654
No 111
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.22 E-value=0.00094 Score=66.08 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc----HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
.+.+++++.++.|++.|+++.++|||. ..++..+.+..|++........+.++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 366789999999999999999999985 4588888888998422111122222110
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005870 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
.-.+|...+ ++.+ .++++||..+|..+-+.||+-.
T Consensus 173 -~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 -GQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred -CCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 012344433 3333 4889999999999999998864
No 112
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.18 E-value=0.0013 Score=63.70 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+++|+++.++|+-+........+.+|+.... ..++..++.. .....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~~-----------------~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADAVR-----------------AYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhhcC-----------------CCCCCHH
Confidence 46799999999999999999999999888888888888874321 1111111110 1112222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
-=..+.+.++...+.+++|||+.+|+.+-+.||+-..
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 2245566676667889999999999999999988643
No 113
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.18 E-value=0.0011 Score=65.57 Aligned_cols=102 Identities=10% Similarity=0.014 Sum_probs=71.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+.... ..++.+++.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeeeCC-----------------CCCCCHH
Confidence 56799999999999999999999998888877777778874321 1112111110 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee--EEcccc
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVADA 612 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg--Iamg~~ 612 (672)
-=..+.+.++-..+.+++|||+.+|+.+-+.||+. +++.++
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 33455566666677899999999999999999996 344443
No 114
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.14 E-value=0.0018 Score=71.39 Aligned_cols=123 Identities=11% Similarity=0.074 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 57899999999999999999999999999999999999885321 1122222111 111232
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcc--cccHHHhhccCEEEcCCChhHHHHHHHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg--~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
--...++.++ .+.+++|||+.+|+.+-+.||+- |++. ...+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2223333332 46799999999999999999984 3443 22222234588887 457777666543
No 115
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.14 E-value=0.0032 Score=60.07 Aligned_cols=126 Identities=20% Similarity=0.134 Sum_probs=73.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCcccccccc-cccCCCccHH
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDK-DESIAALPID 556 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~ 556 (672)
+.|++.++++.|+++|+++.++|..+. .....+.+..|+.- . ..+..... .+
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~-~i~~~~~~~~~-------- 97 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---D-GIYYCPHHPED-------- 97 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---c-eEEECCCCCCC--------
Confidence 579999999999999999999998762 11122233444410 0 01100000 00
Q ss_pred HHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-cccc--H-HHhhcc--CEEEcCCChh
Q 005870 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADAT--D-AARSAS--DIVLTEPGLS 630 (672)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g~~~--~-~~k~~a--d~v~~~~~~~ 630 (672)
..-..+-.|+--..+++.+....+.++||||+.+|+.+-+.||+..-. ..+. + .....+ |+++ +++.
T Consensus 98 -----~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 98 -----GCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred -----CCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 000122334444566666776678899999999999999999975322 2222 1 122235 7776 4466
Q ss_pred HHHHHHH
Q 005870 631 VIISAVL 637 (672)
Q Consensus 631 ~i~~~i~ 637 (672)
.+.+.+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6655443
No 116
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.11 E-value=0.0031 Score=66.59 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985321 1122221110 1122333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-ccccHHH-hhccCEEEcCCChhHH
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADATDAA-RSASDIVLTEPGLSVI 632 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g~~~~~~-k~~ad~v~~~~~~~~i 632 (672)
-=...++.++...+.++||||..+|+.|-+.||+-... ..+.+.. ...||+++. ++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 34566777777788899999999999999999986544 2332222 235888874 45554
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.10 E-value=0.0017 Score=67.41 Aligned_cols=109 Identities=14% Similarity=0.056 Sum_probs=76.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005870 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
..+++.+++.++++.|++.|++++++||++...+..+.+.+|+....+. .+.+.+. ...++... .-.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc--------hhhhcccC-CCCCC
Confidence 5678999999999999999999999999999999999999887531111 1111110 00000000 01234
Q ss_pred ChhhHHHHHHHHhh-CCCEEEEECCCccCHHHHhhCCeeEE
Q 005870 569 FPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 569 ~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
.|+-+...++.+.. ..+.++||||..+|+.+-+.||+-..
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 46667777776654 34789999999999999999998753
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.06 E-value=0.0025 Score=62.95 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+-....+....+.+|+.... ..++.+.+.. ..+..|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 4678999999999999 999999999888888888888885321 1111111100 1122233
Q ss_pred hHHHHHHHH-hhCCCEEEEECCCc-cCHHHHhhCCeeE-Ec--ccccHHHhhccCEEEcCCChhHHHH
Q 005870 572 HKYEIVKRL-QARKHICGMTGDGV-NDAPALKKADIGI-AV--ADATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 572 ~K~~iv~~l-~~~~~~v~~iGDg~-ND~~al~~A~vgI-am--g~~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
-=...++.+ ....+.+++|||+. +|+.+-+.+|+-. .. +..++.....+++++ +++..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 234556666 55567899999998 8999999999733 33 222222233566766 34555443
No 119
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.04 E-value=0.0022 Score=57.67 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKAD 563 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (672)
++.|++.++++.|+++|+++.++|+.. ........+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 577999999999999999999999998 66777788888874210 00000
Q ss_pred eecccChhhHHHHHHHHh-hCCCEEEEECC-CccCHHHHhhCCeeE
Q 005870 564 GFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADIGI 607 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~-~~~~~v~~iGD-g~ND~~al~~A~vgI 607 (672)
...+-.|+-=..+++.++ ...+.++|||| ..+|+.+-+.+|+-.
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 011222333346666663 66778999999 699999999998743
No 120
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.03 E-value=0.0042 Score=57.64 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=64.3
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCcccccccccccCCCccHHHHhhc
Q 005870 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
+|.+.|++++++++++++|++++++|||+...+. .....+ | ++. .+...-.|.... . ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~---------~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFA---------A-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchh---------h-hhc
Confidence 4678999999999999999999999999988774 444442 2 321 000001111000 0 000
Q ss_pred cCeecccCh-hhHHHHHHHHhh-----CCCEEEEECCCccCHHHHhhCCee
Q 005870 562 ADGFAGVFP-EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 562 ~~v~~~~~p-~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
.+. ...| +.|...++.+.. ....++.+||+.+|+.+-+++++-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 1223 337667766665 345677899999999999988764
No 121
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.01 E-value=0.00091 Score=62.87 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=71.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|++++++|+.+........+.+|+... ...++...+.. .....|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHHH
Confidence 4679999999999999999999999999999999999998621 11222221111 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=..+++.++...+.+++|||+..|+.+-+.||+.-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 335667777777788999999999999999998753
No 122
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.97 E-value=0.0014 Score=62.67 Aligned_cols=95 Identities=11% Similarity=0.036 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++|+.|+++|+++.++|+... +....+.+|+.... ..++.+.+.. ..+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC-----------------CCCCChH
Confidence 5679999999999999999999997543 34567777775321 1111111110 1222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=...++.++...+.++||||+.+|+.+-+.||+-.
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 334555556555667999999999999999998853
No 123
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.93 E-value=0.0019 Score=63.94 Aligned_cols=88 Identities=19% Similarity=0.199 Sum_probs=60.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCC----cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
+.+.+++.++.++++|+++.++|++ ...++..+.+.+|+.... ..++.++... ..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f--~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN--PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe--eEEECCCCCC-------------------CC
Confidence 3455999999999999999999999 667888999999996321 1112211110 01
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee
Q 005870 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
.| +|.. .+++.+ .++|+||..||..+-+.|++-
T Consensus 174 Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 2332 334444 479999999999999999875
No 124
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.89 E-value=0.0037 Score=59.42 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+..... ..+..++|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 567999999999999999999999988777 5555557774321 111111110 01222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
--..+.+.+......+++|||...|+.+-+.+|+-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 33556666666678899999999999999999873
No 125
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.88 E-value=0.0019 Score=59.22 Aligned_cols=105 Identities=11% Similarity=0.030 Sum_probs=72.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC----CCCCCC--CCcccccccccccCCCccHHHHhhccCee
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG----MGTNMY--PSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
.++|+-++.++.+++.+++++++|+-.......+-+.++ |.+..+ +...+..+... ..++
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h--------------~i~~ 138 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH--------------SIKY 138 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce--------------eeec
Confidence 478999999999999999999999888777777776665 221100 00000000000 0011
Q ss_pred c--ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005870 566 A--GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 566 ~--~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
- ..-..+|...|+.+.++.+.+.++|||+.|++|-+.+|+=.|-.
T Consensus 139 ~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~ 185 (220)
T COG4359 139 TDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKD 185 (220)
T ss_pred CCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhHH
Confidence 1 11235799999999999999999999999999999988877653
No 126
>PRK09449 dUMP phosphatase; Provisional
Probab=96.82 E-value=0.0062 Score=60.22 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+.... ..++.+.+.. ...-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC-----------------CCCCCHH
Confidence 36799999999999 68999999998888888777888874311 1111111110 1112232
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCc-cCHHHHhhCCeeE-Ecc-cccHH-HhhccCEEEcCCChhHHHHHH
Q 005870 572 HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIGI-AVA-DATDA-ARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~-ND~~al~~A~vgI-amg-~~~~~-~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++.. .+.+++|||+. +|+.+-+.||+-. .+. .+.+. ....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 224555666533 36799999998 7999999999863 333 22211 112478877 4466666544
No 127
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.82 E-value=0.0023 Score=61.15 Aligned_cols=95 Identities=13% Similarity=0.115 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+. ..+..+.+..|+.... ..++.+.... ..+..|+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~~~-----------------~~kp~~~ 146 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADEVK-----------------EGKPHPE 146 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhhCC-----------------CCCCChH
Confidence 57899999999999999999999987 5567777778874321 1111111000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=..+.+.+....+.+++|||+.+|+.+-+.||+..
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 223445555555677999999999999999998853
No 128
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.80 E-value=0.0061 Score=57.45 Aligned_cols=110 Identities=8% Similarity=0.053 Sum_probs=74.4
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeec--cCCCCcchHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhC
Q 005870 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL--FDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLG 530 (672)
Q Consensus 454 ~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~--~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~g 530 (672)
+.+.|.+.+.+-... .+.- ...+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|
T Consensus 20 ~~~~~v~~vv~D~Dg-----------------tl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~g 82 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-----------------TLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALG 82 (170)
T ss_pred HHHCCCCEEEEecCC-----------------ccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcC
Confidence 456788888776432 1111 23567899999999999999999999988 566777777777
Q ss_pred CCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEE
Q 005870 531 MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIA 608 (672)
Q Consensus 531 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIa 608 (672)
+... .+ ...-.|+-=..+++.+....+.++||||.. .|+.+-+.||+-..
T Consensus 83 l~~~-------~~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i 133 (170)
T TIGR01668 83 IPVL-------PH---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTI 133 (170)
T ss_pred CEEE-------cC---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEE
Confidence 6310 00 011122222344455555567799999998 79999999998543
No 129
>PLN02940 riboflavin kinase
Probab=96.77 E-value=0.0049 Score=66.09 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=75.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH-HhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+++.. ...-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC-----------------CCCCCH
Confidence 456999999999999999999999998877766554 56663211 1111111100 122233
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-ccc--cHHHhhccCEEEc
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARSASDIVLT 625 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g~~--~~~~k~~ad~v~~ 625 (672)
+-=..+++.+....+.+++|||+.+|+.+-+.||+.... ..+ .......+|.++.
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 333566666666678899999999999999999987443 332 2223345677663
No 130
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.67 E-value=0.0043 Score=56.95 Aligned_cols=100 Identities=19% Similarity=0.195 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCcccccccc-cccCCCccH
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDK-DESIAALPI 555 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~ 555 (672)
++.|++.++++.|++.|+++.++|+.+. ..+....+.+|+... ..+..... ...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~------ 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD----GVLFCPHHPADN------ 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee----EEEECCCCCCCC------
Confidence 4679999999999999999999998652 344556677776411 00000000 000
Q ss_pred HHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005870 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
.-...-.|+-=..+++.++...+.++||||...|+.+-+.+|+-..
T Consensus 97 -------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 97 -------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0001112222244555555556789999999999999999987543
No 131
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.66 E-value=0.0078 Score=57.12 Aligned_cols=120 Identities=15% Similarity=0.071 Sum_probs=66.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCC-C-Ccccccc-cccccCCCcc
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMY-P-SSALLGQ-DKDESIAALP 554 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~-~-~~~~~~~-~~~~~~~~~~ 554 (672)
+.|++.++|+.|+++|+++.++|.-+. .....+....++.-..+ . .....+. ....
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~------ 100 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQ------ 100 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccC------
Confidence 568999999999999999999997663 11112233333321000 0 0000000 0000
Q ss_pred HHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE--EcccccH---HHhhccCEEEc
Q 005870 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI--AVADATD---AARSASDIVLT 625 (672)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI--amg~~~~---~~k~~ad~v~~ 625 (672)
......-.|+-=....+.++...+.++||||..+|+.+-+.||+.. .+..|.. .....||+++.
T Consensus 101 -------~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 101 -------VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 0001112233334555556556678999999999999999999964 3333321 12234888883
No 132
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.59 E-value=0.0043 Score=57.83 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=62.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCcccc----cccccccCCC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALL----GQDKDESIAA 552 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~----~~~~~~~~~~ 552 (672)
++-|++.++|+.|+++|+++.++|... ...+..+.+.+|+. +....+. .++..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~----- 100 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDDNCD----- 100 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCCCCC-----
Confidence 356899999999999999999999752 34556667777774 1111111 00000
Q ss_pred ccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 553 LPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 553 ~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+..-.|+-=..+++.++...+.++||||+.+|..+-+.|++....
T Consensus 101 ------------~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 101 ------------CRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------------CCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 111112222344444444456799999999999999999987654
No 133
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.42 E-value=0.0087 Score=58.13 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=62.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.++++.|+++|+++.++|+-... .....+.+|+.... ..++...+.. ...-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC-----------------CCCCCHH
Confidence 46789999999999999999999986654 45666777774211 1111111100 1122232
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCee
Q 005870 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg 606 (672)
-=..+++.+....+.+++|||+. +|+.+-+.||+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 23455566665667899999997 899999998864
No 134
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.39 E-value=0.011 Score=55.67 Aligned_cols=106 Identities=7% Similarity=-0.026 Sum_probs=67.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005870 489 LFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+..... ...+...++. .+.+.
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd~-iv~~~ 105 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFDD-RIEIY 105 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhcee-eeecc
Confidence 34467899999999999999999999987 8888888888888741100 0000000000 01111
Q ss_pred cChhhH--HHHHHHHh------hCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005870 568 VFPEHK--YEIVKRLQ------ARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 568 ~~p~~K--~~iv~~l~------~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
-.+..| ..+.+.+. -..+.++||||...|+.+-+.|++-+..-
T Consensus 106 ~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 106 KPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred CCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 111111 23344443 23468999999999999999999877553
No 135
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.33 E-value=0.028 Score=51.20 Aligned_cols=112 Identities=12% Similarity=0.166 Sum_probs=80.8
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 005870 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (672)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~ 529 (672)
..+.+.++|++.+.+-..+ +++..= .....|+.++-+..++++|+++.++|..+...+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567889999998775443 332221 1236689999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH--HHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCee
Q 005870 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDG-VNDAPALKKADIG 606 (672)
Q Consensus 530 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vg 606 (672)
|++. ++.-..|--+ .+.++.++...+.|+|+||. ..|+-+=+.||+-
T Consensus 84 ~v~f------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred CCce------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 9862 1222233322 45667777778899999999 4677766666554
No 136
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.23 E-value=0.0075 Score=55.68 Aligned_cols=90 Identities=20% Similarity=0.200 Sum_probs=60.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
..+++.+.++.|++.|+++.++|+.....+....+.. +... . ..++..+ .+..+..|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecC------------------CCCCCcCHHH
Confidence 3478999999999999999999999988888777764 3211 1 1111110 0112222333
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCC
Q 005870 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 604 (672)
=..+++.++... .++++||+.+|+.+-+.||
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 345555565555 8999999999999988875
No 137
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.23 E-value=0.04 Score=64.84 Aligned_cols=68 Identities=9% Similarity=0.132 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHH-HhCCCcEEEEcCCcHHHHHHHH
Q 005870 448 HAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETG 526 (672)
Q Consensus 448 ~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l-~~~Gi~v~~~TGd~~~~a~~ia 526 (672)
......|.+...|.+++-|.. +++-.-...-.+.++..+++++| ++.|+.|+++|||.........
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence 334556666666777766554 33321111235668999999997 7789999999999998887765
Q ss_pred HH
Q 005870 527 RR 528 (672)
Q Consensus 527 ~~ 528 (672)
..
T Consensus 652 ~~ 653 (854)
T PLN02205 652 SP 653 (854)
T ss_pred CC
Confidence 43
No 138
>PLN02811 hydrolase
Probab=96.14 E-value=0.017 Score=56.94 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH-HHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.|+.|++.|+++.++||-....... ..+..++... -...+.+++.+ .-...-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhh---------------ccCCCCCc
Confidence 467999999999999999999999987643322 2222233210 01111111000 00111223
Q ss_pred hhHHHHHHHHh---hCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 571 EHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+-=...++.+. ...+.+++|||+..|+.+-+.||+-...
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 33345556664 4457899999999999999999986544
No 139
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.10 E-value=0.0074 Score=55.46 Aligned_cols=97 Identities=13% Similarity=-0.042 Sum_probs=67.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+++.... ...++.+++.. +..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d~~-------------------~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDECV-------------------FVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECcccc-------------------ccCC
Confidence 357999999999998 57999999999999999999888874311 11122221111 1112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
. =.+.++.+....+.+++|||..+|..|-+.+++-|..
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 1 1222455555678899999999999998888776654
No 140
>PLN03017 trehalose-phosphatase
Probab=96.05 E-value=0.082 Score=55.46 Aligned_cols=63 Identities=19% Similarity=0.161 Sum_probs=44.5
Q ss_pred hhHHHHHHHHhhC-------CCEEEEECCCccCHHHHhhC-----CeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 571 EHKYEIVKRLQAR-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~-------~~~v~~iGDg~ND~~al~~A-----~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.+|...++.|.+. ...++++||...|-.||+.. ++||.+|.... ...|++.+ ++-+.+...|+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL~ 356 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFLA 356 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHHH
Confidence 3788888877653 23589999999999999865 57777774322 24678877 44667766654
No 141
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.70 E-value=0.032 Score=54.77 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=68.0
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC---CCCCCCCCcccccccccccCCCccHHHHhhccCeec
Q 005870 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
+-++.|++.++++.|+++|+++.++|..+......+.+..+ +... .. ..+ + ..+-.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f~-~~f-----d--------------~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-FS-GYF-----D--------------TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-cc-eEE-----E--------------eCccc
Confidence 34688999999999999999999999988776666555442 2110 00 000 0 00111
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
.-.|+-=..+++.++...+.++++||...|+.+-+.||+-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2233333666777776678899999999999999999997654
No 142
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.63 E-value=0.014 Score=58.52 Aligned_cols=66 Identities=21% Similarity=0.191 Sum_probs=47.6
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhC--------CeeEEcccccHHHhhccCEEEcCCChhHHHHH
Q 005870 568 VFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A--------~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~ 635 (672)
..+.+|...++.+.+. ...++++||+.||.+|++.+ +.+|+|+.+. .+..|++++. +.+.+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHH
Confidence 3456787777665443 45799999999999999999 5888886432 4567899885 45666665
Q ss_pred HH
Q 005870 636 VL 637 (672)
Q Consensus 636 i~ 637 (672)
++
T Consensus 239 L~ 240 (244)
T TIGR00685 239 LG 240 (244)
T ss_pred HH
Confidence 53
No 143
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.62 E-value=0.04 Score=51.62 Aligned_cols=93 Identities=8% Similarity=-0.011 Sum_probs=59.0
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhc
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ...+.+...
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~--------------- 104 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG--------------- 104 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC---------------
Confidence 489999999999999999999975532 3456677788742 111111100
Q ss_pred cCeecccChhhHHHHHHHHh--hCCCEEEEECCCc--------cCHHHHhhCCeeE
Q 005870 562 ADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGV--------NDAPALKKADIGI 607 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~--~~~~~v~~iGDg~--------ND~~al~~A~vgI 607 (672)
....-.|+-=..+++.++ ...+.++||||.. +|+.+-+.||+-.
T Consensus 105 --~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 --LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred --CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 011111222234455554 3456799999986 6999999887753
No 144
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.55 E-value=0.061 Score=54.21 Aligned_cols=87 Identities=14% Similarity=0.068 Sum_probs=57.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
.++-|++.+.++.|++.|+++.++|++.... +....+..|+...... .++.|
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lllr 171 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLLK 171 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEeC
Confidence 4567999999999999999999999998443 3355566787532111 11222
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhh
Q 005870 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~ 602 (672)
-....|..-.+.+.+....++++||..+|......
T Consensus 172 ~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 172 KDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFFY 206 (266)
T ss_pred CCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhhc
Confidence 11123444444454555679999999999976543
No 145
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.51 E-value=0.071 Score=64.69 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=83.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+-|++.+.++.|+++|+++.++|+.....+....+..|+....+ ..++.+++.. ...-.|+-
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~~~-----------------~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADAFE-----------------NLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcccc-----------------cCCCCHHH
Confidence 56899999999999999999999999888888888888852111 1112111110 11222333
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE-Ecccc---cHHHhhccCEEEcCCChhHHHHHHH
Q 005870 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA---TDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI-amg~~---~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
=...++.++...+.+++|||..+|+.+-+.||+-. ++..+ .+.....+|+++.+-..-.+...+.
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 35566777766788999999999999999999843 33322 2223346788885543333444443
No 146
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.50 E-value=0.088 Score=52.72 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=60.0
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH--HHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhcc
Q 005870 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (672)
|.+.-.+.+-|++.+++++|+++|+++.++|........ ...+.+|+..+.. ..++.....
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~s~~~---------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIISSGEI---------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEccHHH----------------
Confidence 555666778899999999999999999999986654433 5567788753111 111111000
Q ss_pred CeecccChhhHHHHHHHHh---hCCCEEEEECCCccCHHHHhhCC
Q 005870 563 DGFAGVFPEHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKAD 604 (672)
Q Consensus 563 ~v~~~~~p~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~ 604 (672)
....+.+.++ ..+..+.++||+.+|...+..++
T Consensus 80 ---------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 ---------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0112222222 23567999999999999886544
No 147
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.47 E-value=0.041 Score=49.12 Aligned_cols=93 Identities=9% Similarity=0.054 Sum_probs=58.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC-
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF- 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 569 (672)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+... ... .+...... .+.+...
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~-----~i~------------~l~~~f~~-~~~~~~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFG-----IIF------------PLAEYFDP-LTIGYWLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccc-----cch------------hhHhhhhh-hhhcCCCc
Confidence 57899999999999999999999999 7777767666665100 000 00000000 0011111
Q ss_pred -hhhHHHHHHHHh--hCCCEEEEECCCccCHHHHhh
Q 005870 570 -PEHKYEIVKRLQ--ARKHICGMTGDGVNDAPALKK 602 (672)
Q Consensus 570 -p~~K~~iv~~l~--~~~~~v~~iGDg~ND~~al~~ 602 (672)
|+-=..+++.++ ...+.++||||...|...++.
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 222245566666 567899999999999877653
No 148
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.41 E-value=0.12 Score=49.09 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=34.1
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005870 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
.+.+.+.+|+++|++|+.+|.........+-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999986
No 149
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.38 E-value=0.075 Score=52.09 Aligned_cols=88 Identities=18% Similarity=0.226 Sum_probs=54.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
-|.-|++.++++.|++.|++|+++|||+... +..-.++.|++.. ....+.+..-. ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCCCC------------------Cc
Confidence 3677899999999999999999999999754 3344456677531 11111110000 00
Q ss_pred cChhhHHHHHHHHhhCCC-EEEEECCCccCHH
Q 005870 568 VFPEHKYEIVKRLQARKH-ICGMTGDGVNDAP 598 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~ 598 (672)
....-|...-+.+.+.|. +++.+||..+|..
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 001125555556666655 5778999999974
No 150
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.22 E-value=0.045 Score=57.53 Aligned_cols=100 Identities=10% Similarity=0.013 Sum_probs=61.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHH
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (672)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.- ....+......+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f---d~i~i~~~~~sd-------- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF---DEVLICPHFPED-------- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce---eeEEEeCCcCcc--------
Confidence 57899999999999999999999983 2334555666666631 111110000000
Q ss_pred HHhhccCeecccChhhH--HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 557 ~~~~~~~v~~~~~p~~K--~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
...++ .|... ..+.+.+......++||||+.+|..+-+.|++-...
T Consensus 99 ------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 ------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred ------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00111 22211 233333444457899999999999999999987544
No 151
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.16 E-value=0.071 Score=52.58 Aligned_cols=104 Identities=18% Similarity=0.145 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHH--HhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccc-ccccccCCCccHHHHhhccCeeccc
Q 005870 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG-QDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 492 ~~r~~~~~~I~~l--~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
|+.|+.+++++.+ ++.|+.+.++|--+......+.+.-|+..... .+++. ..++.. ....+.... .+-+.++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~-G~l~v~pyh--~h~C~~C 145 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTNPACFDAD-GRLRVRPYH--SHGCSLC 145 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeCCceecCC-ceEEEeCcc--CCCCCcC
Confidence 6788999999999 55899999999999988899999989853211 11111 001000 000000000 0223344
Q ss_pred Ch-hhHHHHHHHHhhC----C---CEEEEECCCccCHHHH
Q 005870 569 FP-EHKYEIVKRLQAR----K---HICGMTGDGVNDAPAL 600 (672)
Q Consensus 569 ~p-~~K~~iv~~l~~~----~---~~v~~iGDg~ND~~al 600 (672)
.| -=|..+++.+... | .+|.++|||.||....
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 33 3588888887764 3 6899999999997544
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.08 E-value=0.026 Score=55.16 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHH--HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
++.|++.+.++.|+++|+++.++|+..... ........++.... ..++...+. -...-.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~-----------------~~~KP~ 154 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCLE-----------------GLRKPD 154 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeeec-----------------CCCCCC
Confidence 578999999999999999999999865432 22222223332110 011110000 011222
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005870 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
|+-=..+++.++...+.+++|||...|+.+-+.||+-..
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i 193 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTI 193 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 333345556666666789999999999999999998543
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=95.08 E-value=0.058 Score=52.19 Aligned_cols=99 Identities=9% Similarity=-0.002 Sum_probs=62.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.++++.|+++|+++.++|.-+.......... .++... . ..++...+.. ...-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~~-----------------~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDLG-----------------MRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecccC-----------------CCCCCH
Confidence 3679999999999999999999999876544332211 222110 0 0111111100 112223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+-=..+++.++...+.+++|||...|+.+-+.||+-...
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 333556667766678899999999999999999986543
No 154
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=95.06 E-value=0.048 Score=53.69 Aligned_cols=97 Identities=12% Similarity=0.140 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.| ++++.++|+.+...+...-+..|+.... ...++.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4899999999888888877778875321 11122221110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
-=....+.+....+.+++|||+.+|+.+-+.||+.+..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33555666665667799999999999999999988764
No 155
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.36 E-value=0.18 Score=48.08 Aligned_cols=114 Identities=18% Similarity=0.189 Sum_probs=67.6
Q ss_pred CCCcchHHHHHHHHhCCC-cEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccc-cccccCCCccHHHHhhccCeecccC
Q 005870 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ-DKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
|+.|+..++|+.+++.|. .+.++|--|.-....+.+..|+.+-.. .+++.. ..+. --...+.... ..+-+.+ .
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~--~IfTNPa~~da-~G~L~v~pyH-~~hsC~~-C 158 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS--EIFTNPACVDA-SGRLLVRPYH-TQHSCNL-C 158 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH--HHhcCCcccCC-CCcEEeecCC-CCCccCc-C
Confidence 678999999999999997 899999988888888888877642100 000000 0000 0000000000 0011233 3
Q ss_pred hhh--HHHHHHHHhhC-------CCEEEEECCCccCH-HHHhhCCeeEEcc
Q 005870 570 PEH--KYEIVKRLQAR-------KHICGMTGDGVNDA-PALKKADIGIAVA 610 (672)
Q Consensus 570 p~~--K~~iv~~l~~~-------~~~v~~iGDg~ND~-~al~~A~vgIamg 610 (672)
|.+ |..+++.++.. -+++.++|||.||. |+++...--+||-
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 443 66666666543 24799999999994 6777777777773
No 156
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=94.20 E-value=0.11 Score=49.59 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=64.1
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
-|+ .+.++.|++. +++.++||.....+....+..|+.... ..++..++.. ..+..|+-=
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~ 148 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTF 148 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHH
Confidence 344 6899999865 899999999999999988989885321 1122211110 122233334
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005870 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
....+.++.....+++|||..+|+.+-+.||+-.
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 5566666666677999999999999999998754
No 157
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.10 E-value=0.13 Score=53.91 Aligned_cols=95 Identities=14% Similarity=0.049 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH----hCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
++.+++.++|+.|++.|+++.++|..+...+..+.+. +++..... ...+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~------------------------~~~~~~~ 86 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD------------------------ARSINWG 86 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee------------------------EEEEecC
Confidence 3468999999999999999999999999999988887 66542110 0000111
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005870 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
..|+.=..+++.+......++||||...|+.+.+.+...+.+-
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2233445566666666688999999999999999998876553
No 158
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=93.96 E-value=0.3 Score=46.11 Aligned_cols=51 Identities=22% Similarity=0.334 Sum_probs=41.5
Q ss_pred EEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHH---HHHhCCC
Q 005870 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMG 532 (672)
Q Consensus 482 ~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~i---a~~~gi~ 532 (672)
.+-|.+.++|..-|++.+|++.|+.++.+|..+|.-..+.-..+ .+.+|++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 56799999999999999999999999999999987665544444 4456664
No 159
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.86 E-value=0.084 Score=44.91 Aligned_cols=89 Identities=15% Similarity=0.183 Sum_probs=54.1
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCCCCCCCCcccccccccccCCCccHHHHhhc
Q 005870 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
|++...+++-|++.++|+.|+++|++++++|..+..+...++ +.+|+.-. +..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~--~~~---------------------- 62 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVD--EDE---------------------- 62 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGG----------------------
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCC--cCE----------------------
Confidence 445556778899999999999999999999987754433333 56777521 111
Q ss_pred cCeecccChhhHHHHHHHHhh--CCCEEEEECCCccCHHHHhhCCe
Q 005870 562 ADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVNDAPALKKADI 605 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~--~~~~v~~iGDg~ND~~al~~A~v 605 (672)
++. |. ....+.|++ .+..|.++|.. .....++.+|+
T Consensus 63 --i~t---s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 63 --IIT---SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp --EEE---HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred --EEC---hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 111 11 233344444 47889999876 56666666653
No 160
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.58 E-value=0.54 Score=47.24 Aligned_cols=49 Identities=8% Similarity=-0.023 Sum_probs=40.8
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcC---CcHHHHHHHHHHhCCCC
Q 005870 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMGT 533 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~~ 533 (672)
|.+.-.+.+-|++.++|++|+++|++++++|| ++........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 55555667778999999999999999999996 77888888888888854
No 161
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=93.52 E-value=0.13 Score=48.91 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.+++.+++++|+ .+++++|+.+...+....+.+|+.... ..++...+.... .....-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 36689999999997 478999999988888888999885321 112211111000 000122333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=..+++.++...+.+++|||...|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 335666777767788999999999999999998754
No 162
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.46 E-value=0.31 Score=45.41 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=75.8
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCc--EEEEcCC-------cHHHHHH
Q 005870 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 524 (672)
Q Consensus 454 ~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~--v~~~TGd-------~~~~a~~ 524 (672)
+.+.|.|.+.+=... ++. .-=++++.|+..+.+++|++.+.. ++++|.. ....|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL~--~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TLT--PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CCC--CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888774432 100 012567889999999999999875 9999986 3788999
Q ss_pred HHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhC-----CCEEEEECCC-ccCHH
Q 005870 525 TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDG-VNDAP 598 (672)
Q Consensus 525 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-----~~~v~~iGDg-~ND~~ 598 (672)
+.+.+|+.- -.+....|.-..++.+.++.+ .+.+++|||- ..|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999851 012334575566777877654 6789999998 46776
Q ss_pred HHhhCC
Q 005870 599 ALKKAD 604 (672)
Q Consensus 599 al~~A~ 604 (672)
|=...|
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 665554
No 163
>PLN02645 phosphoglycolate phosphatase
Probab=93.04 E-value=0.22 Score=51.95 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=40.0
Q ss_pred EEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCC
Q 005870 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 532 (672)
Q Consensus 483 ~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~ 532 (672)
+=|.+.-.+.+-|++.++|+.|+++|++++++|+++..+...++ +.+|+.
T Consensus 35 ~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 35 CDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 33666666777899999999999999999999999966666655 456763
No 164
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=92.79 E-value=0.34 Score=47.72 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=76.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++.|++.+.++.|++.|+.+.++|+.+...+..+.+.+|+.... ...+.+.+.. -.+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 367899999999999999999999999999999999999986421 1111111111 123345
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+-=...++.|.-....+++|.|+.|.+.|-++||.-+-.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 555777777777788999999999999999999987654
No 165
>PLN02151 trehalose-phosphatase
Probab=92.28 E-value=0.94 Score=47.51 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=43.7
Q ss_pred hHHHHHHHHhhC-C------CEEEEECCCccCHHHHhhC-----CeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005870 572 HKYEIVKRLQAR-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~-~------~~v~~iGDg~ND~~al~~A-----~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+|...++.+.+. + ..++++||...|-.||+.. |+||-+|.+.. ...|++.+. +-+.+...++
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCC--CHHHHHHHHH
Confidence 788888877654 1 2489999999999999853 67777774332 236888884 4666666664
No 166
>PLN02423 phosphomannomutase
Probab=91.20 E-value=0.29 Score=49.12 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=35.0
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CccCHHHHhh-CCeeEEccc
Q 005870 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKK-ADIGIAVAD 611 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~-A~vgIamg~ 611 (672)
.+|...++.|+ ..+.|++||| |.||.+||+. -=.|+++.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 57999999999 7889999999 8999999996 667888764
No 167
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.04 E-value=0.7 Score=46.07 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=57.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.++++.|++. +++.++|..+.. .+..|+.... ..++...+.. ...-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF--EFVLRAGPHG-----------------RSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh--ceeEecccCC-----------------cCCCcHH
Confidence 4568999999999975 899999986543 1445653211 0111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEcc
Q 005870 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAVA 610 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIamg 610 (672)
-=...++.++...+.++||||+ ..|+.+-+.||+-....
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 2234455565556789999999 59999999999876554
No 168
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.97 E-value=0.56 Score=45.14 Aligned_cols=95 Identities=11% Similarity=0.064 Sum_probs=55.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--CCCcccccccccccCCCccHHHHhhccCeecccC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
++.|++.++++.|++.+ +.+++|..+........+.+++.... .-..++.+.. ....
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~--------------------~~~k 132 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH--------------------DESK 132 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc--------------------Cccc
Confidence 36789999999999875 56677765444433344555553110 0011111110 0011
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhC--CeeEEc
Q 005870 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA--DIGIAV 609 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A--~vgIam 609 (672)
|+--..+++.++ .+.+++|||..+|+.+-++| |+-...
T Consensus 133 p~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 133 EKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred HHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 322233444444 35688999999999999999 986543
No 169
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=90.66 E-value=1.9 Score=44.13 Aligned_cols=48 Identities=21% Similarity=0.228 Sum_probs=36.0
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH---HHHHhCCC
Q 005870 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRLGMG 532 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~---ia~~~gi~ 532 (672)
|.+.-.+.+-|++.++|++|+++|++++++|+++..+... -.+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 5555567777889999999999999999999976543333 33556764
No 170
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=90.12 E-value=0.4 Score=47.44 Aligned_cols=88 Identities=20% Similarity=0.149 Sum_probs=54.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH---HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
.-|++.+.++.+++.|++|+.+|||+.. .+..-.++.|+... ....+.+.... -....
T Consensus 116 aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~~ 176 (229)
T PF03767_consen 116 AIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKSA 176 (229)
T ss_dssp EETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS---
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------ccccc
Confidence 3478999999999999999999999864 33334556676421 11111111100 00011
Q ss_pred hhhHHHHHHHHhhCC-CEEEEECCCccCHHH
Q 005870 570 PEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (672)
Q Consensus 570 p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~a 599 (672)
...|...-+.+.++| ++++.+||..+|..-
T Consensus 177 ~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 233677777787775 467789999999875
No 171
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=88.92 E-value=2.5 Score=38.79 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=66.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH---HHHHHhCCCCCCCCCc-ccccccccccCCCccHHHHhhccCeec
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRLGMGTNMYPSS-ALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~---~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
|..++++.+..+.++++|++++-+|+|+...+. .......=.....|.. ++.. ...+...+. ..+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~s--------P~~l~~al~-rEvi~ 96 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLS--------PDSLFSALH-REVIS 96 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEEC--------Ccchhhhhh-ccccc
Confidence 689999999999999999999999999965443 3333330000011111 1111 000000000 01334
Q ss_pred ccChhhHHHHHHHHhhC-----CCEEEEECCCccCHHHHhhCCee
Q 005870 567 GVFPEHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~-----~~~v~~iGDg~ND~~al~~A~vg 606 (672)
+-.-+.|...++.++.. ....+.+|...+|+.+-+++|+-
T Consensus 97 ~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 97 KDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 43446788888888754 34678899999999999988765
No 172
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.92 E-value=1.7 Score=48.04 Aligned_cols=98 Identities=16% Similarity=0.049 Sum_probs=62.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCC------CCcccccccccccCCCccHHHHhhccCee
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMY------PSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
+++++.+ .+++.|. ++++|+-+...++.++++ +|++.-.- ....++|.... -
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 4555444 4556775 499999999999999987 89862100 11222221100 0
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005870 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
..+.-++|..-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0123456777666432111223789999999999999999999985
No 173
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=88.73 E-value=1.6 Score=42.92 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-+++.++++.+++. +++.++|.-.........+++|+... +......+. .....|.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~--------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED--------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc--------------------cccCCCC
Confidence 4568999999999998 99999998777777888889996432 111111110 1122233
Q ss_pred h--HHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCee-EEccccc---HHHhhccCEEEcCCChhHHHHHH
Q 005870 572 H--KYEIVKRLQARKHICGMTGDG-VNDAPALKKADIG-IAVADAT---DAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~--K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vg-Iamg~~~---~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
. =..+.+.+....+.+++|||+ .||+..-+.+|.- |-+.... .......|+.+ .++..+...+
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 2 255666666667889999997 6775666666664 3343221 11114556555 3355555444
No 174
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.76 E-value=0.91 Score=45.85 Aligned_cols=48 Identities=25% Similarity=0.337 Sum_probs=37.8
Q ss_pred EEeeccCC----CCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCC
Q 005870 485 GLMPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMG 532 (672)
Q Consensus 485 G~i~~~d~----~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~ 532 (672)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+.+|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 56666666 88999999999999999999999987654 44445567774
No 175
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=86.51 E-value=3.4 Score=41.49 Aligned_cols=31 Identities=13% Similarity=0.320 Sum_probs=27.1
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005870 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
+.|.-|++.+..+.+++.|++|+++|||...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3456689999999999999999999999854
No 176
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=85.45 E-value=0.96 Score=42.46 Aligned_cols=86 Identities=14% Similarity=0.037 Sum_probs=55.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++ ++.++|.-+........+..|+.... ..++.+++. -...-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 46789999998 36799998888888888888875321 011111110 01222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhC
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 603 (672)
-=....+.++...+.++||||+..|+.+-+.+
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 33566677776678899999999999876653
No 177
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=85.43 E-value=1.1 Score=45.22 Aligned_cols=118 Identities=14% Similarity=0.142 Sum_probs=68.1
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhh-----ccCeecccC
Q 005870 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE-----KADGFAGVF 569 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~ 569 (672)
++..++++.|++.|.++.++|+.............|+. .+-..+. ...++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999987643222111111110 0000000 001123333
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc-cccc---H---HHhhccCEEEcCCChhHHHHH
Q 005870 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV-ADAT---D---AARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam-g~~~---~---~~k~~ad~v~~~~~~~~i~~~ 635 (672)
|+-=..+++.++...+.++||||.. +|+.+-+.+|+--.. ..|. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 4433455566666678899999996 999999999886544 3331 1 1223478777 446555543
No 178
>PRK10444 UMP phosphatase; Provisional
Probab=85.29 E-value=0.9 Score=45.60 Aligned_cols=48 Identities=21% Similarity=0.318 Sum_probs=40.7
Q ss_pred EEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH---hCC
Q 005870 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR---LGM 531 (672)
Q Consensus 484 lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~---~gi 531 (672)
=|.+.-.+.+-|++.++|+.|+++|++++++|++...+...++++ +|+
T Consensus 9 DGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 9 DGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 366777788899999999999999999999999998777776665 466
No 179
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=85.25 E-value=1.5 Score=44.59 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.7
Q ss_pred CC-cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005870 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 493 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
+| |++.+++++|+++|+++.++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 45 999999999999999999999999888889999999974
No 180
>PTZ00445 p36-lilke protein; Provisional
Probab=84.23 E-value=6 Score=38.13 Aligned_cols=142 Identities=11% Similarity=0.125 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEE-----E-------eeccCCCCcchHHHHHHHHhCCCcE
Q 005870 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMG-----L-------MPLFDPPRHDSAETIRRALNLGVNV 511 (672)
Q Consensus 444 ~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG-----~-------i~~~d~~r~~~~~~I~~l~~~Gi~v 511 (672)
.+..+...+.+.+.|.|++++=+.. ++++ . ..+--.++|+.+.-+++|+++||++
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 4455566778899999999886543 3322 1 1111237999999999999999999
Q ss_pred EEEcCCcHHH---------------HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH---
Q 005870 512 KMITGDQLAI---------------GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK--- 573 (672)
Q Consensus 512 ~~~TGd~~~~---------------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--- 573 (672)
.++|=-.... +....+..+.........++...-++. -... .+ .-...-.|+.|
T Consensus 95 ~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~------p~~y-~~-~gl~KPdp~iK~yH 166 (219)
T PTZ00445 95 SVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQE------PSDY-RP-LGLDAPMPLDKSYH 166 (219)
T ss_pred EEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCC------hhhh-hh-hcccCCCccchHHH
Confidence 9999443322 122222222111100000000000000 0000 00 00112234553
Q ss_pred -HHHHHHHhhCCCEEEEECCCccCHHHHhhCCee
Q 005870 574 -YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 574 -~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
..+++..+...+.++++=|....+.+-+..|+-
T Consensus 167 le~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ 200 (219)
T PTZ00445 167 LKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYI 200 (219)
T ss_pred HHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCE
Confidence 345555555677899999999999998887654
No 181
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=84.17 E-value=2.8 Score=46.72 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=32.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH------------HHHHHHHHHhCCC
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 532 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~------------~~a~~ia~~~gi~ 532 (672)
+-|++.++|+.|+++|++++++|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999997554 3456677777764
No 182
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=83.77 E-value=5 Score=42.09 Aligned_cols=107 Identities=14% Similarity=0.088 Sum_probs=65.4
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh-C-------CCCCCCCCccccccc----------cc------cc
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G-------MGTNMYPSSALLGQD----------KD------ES 549 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~-g-------i~~~~~~~~~~~~~~----------~~------~~ 549 (672)
.|++.+.++.|+++|+++.++|+-+...+..+.+.+ | +.... +.++.+.. +. ..
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yF--D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYF--DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhC--cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 579999999999999999999999999999988886 6 22110 11111111 00 00
Q ss_pred CCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCC-ccCHHHHh-hCCee
Q 005870 550 IAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDG-VNDAPALK-KADIG 606 (672)
Q Consensus 550 ~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~-~A~vg 606 (672)
+....... +++..+|+.=+- ..+.+.++..+..|++|||. ..|+-.-+ .+|.-
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~ 318 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWR 318 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcE
Confidence 11111111 222334443332 45566677789999999998 46777665 55543
No 183
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=83.44 E-value=1.3 Score=39.27 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHH
Q 005870 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 521 (672)
+++.+++.++++.++++|+.++++|||+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 5678899999999999999999999998754
No 184
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=82.51 E-value=8.1 Score=36.48 Aligned_cols=25 Identities=8% Similarity=0.077 Sum_probs=22.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCC
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGD 517 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd 517 (672)
+.+++.++++.|+++|++++|+|.-
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ 56 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ 56 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC
Confidence 5689999999999999999999963
No 185
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=82.28 E-value=6 Score=39.20 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=66.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc--cC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--VF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 569 (672)
.+|+++.+.++.|++.+|++.+.|+-=-.....+.++-|...+.. .+......-. +...+ .-|.. .-
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv---~VvSN~M~Fd-~~g~l-------~gF~~~lIH 158 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV---KVVSNFMDFD-EDGVL-------VGFKGPLIH 158 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE---EEEEE-EEE--TTSBE-------EEE-SS---
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe---EEEeeeEEEC-CcceE-------eecCCCceE
Confidence 579999999999999999999999877777777777766543211 1111100000 00000 00000 00
Q ss_pred hhhHHH-------HHHHHhhCCCEEEEECCCccCHHHHhhC---CeeEEcc--ccc-H----HHhhccCEEEcCCChhHH
Q 005870 570 PEHKYE-------IVKRLQARKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-D----AARSASDIVLTEPGLSVI 632 (672)
Q Consensus 570 p~~K~~-------iv~~l~~~~~~v~~iGDg~ND~~al~~A---~vgIamg--~~~-~----~~k~~ad~v~~~~~~~~i 632 (672)
+-.|-. .-+.++ ....|+..||+.-|+.|-.-. +.-+.+| |.. + .-+++=|+|+.++.--.+
T Consensus 159 ~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v 237 (246)
T PF05822_consen 159 TFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDV 237 (246)
T ss_dssp TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HH
T ss_pred EeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchH
Confidence 111211 112222 245799999999999998666 4444455 433 2 234577999998764444
Q ss_pred HHHH
Q 005870 633 ISAV 636 (672)
Q Consensus 633 ~~~i 636 (672)
+..|
T Consensus 238 ~~~i 241 (246)
T PF05822_consen 238 PNAI 241 (246)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 186
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=81.54 E-value=12 Score=37.79 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=69.0
Q ss_pred EEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC----CCCCCCCCcccccccccccCCCccHHHH
Q 005870 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG----MGTNMYPSSALLGQDKDESIAALPIDEL 558 (672)
Q Consensus 483 ~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (672)
+=|++.--+.+=|++.++|+.|+++|++++.+|..+..+...+++++. ++.. +..+++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~--~~~i~T---------------- 76 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVT--PDDIVT---------------- 76 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCC--HHHeec----------------
Confidence 447888888899999999999999999999999887766664544432 2110 011110
Q ss_pred hhccCeecccChhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCC
Q 005870 559 IEKADGFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627 (672)
Q Consensus 559 ~~~~~v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~ 627 (672)
+. ....+.++++ +.+|.++| ...+.+.++.+|+-+.-.... + ..|+|+...
T Consensus 77 -----------S~--~at~~~l~~~~~~~kv~viG-~~~l~~~l~~~G~~~~~~~~~--~--~~d~Vv~g~ 129 (269)
T COG0647 77 -----------SG--DATADYLAKQKPGKKVYVIG-EEGLKEELEGAGFELVDEEEP--A--RVDAVVVGL 129 (269)
T ss_pred -----------HH--HHHHHHHHhhCCCCEEEEEC-CcchHHHHHhCCcEEeccCCC--C--cccEEEEec
Confidence 00 1222334433 36899999 445778899888777654211 1 156666543
No 187
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=80.54 E-value=13 Score=45.21 Aligned_cols=200 Identities=15% Similarity=0.133 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceE-E----EECCeEEEEeCCCCCCCcEEEEcCCCeecc
Q 005870 99 DFVGIITLLVINSTISFIEENNAGNAAAALMARL-----APKGK-V----LRDGRWNEQDASILVPGDIISIKLGDIIPA 168 (672)
Q Consensus 99 ~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~-V----~r~g~~~~i~~~~L~~GDiI~l~~G~~iPa 168 (672)
..+++++.++++.+.++.+++..++..+...+.. ..+.. + +.-|....+...|.+|.|.+.++ |+..-+
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~V 212 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLEI 212 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEEE
Confidence 3445556667778888888887776544332211 12211 1 23477899999999999999996 444556
Q ss_pred cEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHHH
Q 005870 169 DARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (672)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (672)
|=-.+.|++.-++-. .|+.. .-..|..+..|+...--...+.=+..|.=... +......+.-...+.+..+.+.
T Consensus 213 dES~LTGES~pv~K~--~~~~n--~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~~ 286 (941)
T TIGR01517 213 DESSITGESDPIKKG--APKDS--FLLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLIG 286 (941)
T ss_pred EecccCCCCCccccc--CCCCc--eEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHHH
Confidence 666666665323221 12221 12456777777643221111222222211100 0000011111223344444444
Q ss_pred HHHHHH---HHHHHHHHHHHH------------hhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHH
Q 005870 249 NFCICS---IAVGMIVEIIVM------------YPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (672)
Q Consensus 249 ~~~~~~---~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~ 305 (672)
.+.+.+ +++..++.++.. .......+..++..+++.+.+++|.++++++..+.....
T Consensus 287 ~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 287 KFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 332211 111111111110 001112344556677778889999999999888876544
No 188
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=79.67 E-value=3.2 Score=42.25 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.5
Q ss_pred CC-cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005870 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 493 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
+| |++.++|++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 34 899999999999999999999877778888999999964
No 189
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=78.62 E-value=1.6 Score=40.68 Aligned_cols=96 Identities=10% Similarity=0.004 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
..||++.+.++.|.+. ..+++.|......|..+.+.++.....+. ..+..+... .. .|.
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~-~~l~r~~~~-----------------~~--~~~ 100 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS-RRLYRESCV-----------------FT--NGK 100 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe-EEEEccccE-----------------Ee--CCC
Confidence 5799999999999987 99999999999999999998886421111 111110000 00 010
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005870 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
- .+-++.+......|+++||...|..+-+.+++-|..
T Consensus 101 ~-~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~ 137 (162)
T TIGR02251 101 Y-VKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKS 137 (162)
T ss_pred E-EeEchhcCCChhhEEEEeCChhhhccCccCEeecCC
Confidence 0 111222344456799999999988877766655543
No 190
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=77.30 E-value=20 Score=35.57 Aligned_cols=48 Identities=25% Similarity=0.223 Sum_probs=36.3
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHH-hCCC
Q 005870 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRR-LGMG 532 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~-~gi~ 532 (672)
|++.-.+.+=|++.++|+.++++|++++++| |++.........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 5555566777899999999999999999998 6666655444444 6763
No 191
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=76.46 E-value=3.2 Score=32.83 Aligned_cols=56 Identities=27% Similarity=0.324 Sum_probs=38.6
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEc---ccc-cHHH---hhccCEEEc
Q 005870 570 PEHKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV---ADA-TDAA---RSASDIVLT 625 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIam---g~~-~~~~---k~~ad~v~~ 625 (672)
|.-=..+.+.++.....++||||. ..|+.+-+.+|+--.+ |.. .+.. ...+|+|+.
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 333355566666566789999999 9999999999986544 322 2222 247889874
No 192
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=72.43 E-value=4.5 Score=37.40 Aligned_cols=89 Identities=25% Similarity=0.333 Sum_probs=55.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH----HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
+++=+++.|..=++.|-.++.+|||.+- ++..+++...|... .... |+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~pv~------------------------f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NPVI------------------------FAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--ccee------------------------eccC
Confidence 4456677788888899999999999864 44556666666321 1111 2222
Q ss_pred Ch-hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEE
Q 005870 569 FP-EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIA 608 (672)
Q Consensus 569 ~p-~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIa 608 (672)
.| ..+..-...++.++ .-..-||+.||+.|-|.||+ ||-
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIR 209 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIR 209 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCcccee
Confidence 22 01112223455554 45678999999999999986 443
No 193
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=69.63 E-value=5 Score=40.00 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=52.4
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhh---c-cCeecccC
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE---K-ADGFAGVF 569 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~v~~~~~ 569 (672)
-++..++++.|++.|++. ++|+.....+.......|.. .+...+. . ...+..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 378889999998899997 77876543332211111111 0111110 0 00122333
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCC-ccCHHHHhhCCeeE
Q 005870 570 PEHKYEIVKRLQAR-KHICGMTGDG-VNDAPALKKADIGI 607 (672)
Q Consensus 570 p~~K~~iv~~l~~~-~~~v~~iGDg-~ND~~al~~A~vgI 607 (672)
|+-=..+.+.+... .+.++||||. .+|+.+=+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 33334455555433 4579999999 69999999988754
No 194
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=69.45 E-value=25 Score=35.47 Aligned_cols=68 Identities=16% Similarity=0.086 Sum_probs=44.6
Q ss_pred HHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCC-CcEEEEcCCcHHHHHHHHHHhC
Q 005870 452 DKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLG 530 (672)
Q Consensus 452 ~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~g 530 (672)
..+.....|.+.+=|.. .++.+..--....+-++..+.+++|.... ..++++|||+.........-.|
T Consensus 11 ~~~~~a~~~~~~lDyDG-----------Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~ 79 (266)
T COG1877 11 EPYLNARKRLLFLDYDG-----------TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPG 79 (266)
T ss_pred cccccccceEEEEeccc-----------cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCC
Confidence 34444555666665544 12223333345567789999999999874 4699999999988777655333
No 195
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=69.15 E-value=32 Score=35.04 Aligned_cols=95 Identities=14% Similarity=-0.025 Sum_probs=54.0
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhh----cc-Ceeccc
Q 005870 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE----KA-DGFAGV 568 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~v~~~~ 568 (672)
-++..++++.|++.|+ ..++|......... -+... .....+...+. .. .....-
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~----~~~~~----------------~~~g~~~~~i~~~~g~~~~~~gKP 203 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLS----DGSRT----------------PGTGSLVAAIETASGRQPLVVGKP 203 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCc----CCCcc----------------cChHHHHHHHHHHhCCceeccCCC
Confidence 4688999999999897 67787655321100 00000 00000001110 00 112333
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEc
Q 005870 569 FPEHKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV 609 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIam 609 (672)
+|+-=..+++.+....+.++||||. ..|+.+-+.||+--..
T Consensus 204 ~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~ 245 (279)
T TIGR01452 204 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVL 245 (279)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEE
Confidence 4443345566666667889999999 5999999999987543
No 196
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=67.15 E-value=31 Score=39.03 Aligned_cols=104 Identities=11% Similarity=0.132 Sum_probs=73.7
Q ss_pred ccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC-C
Q 005870 57 KKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMA-RLA-P 134 (672)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~-~~~-~ 134 (672)
--|..+..-|++|+|.+++++.+..++..+...+... +|..+++++++.++.-.++.++++++.+..+.-.- .+. .
T Consensus 94 F~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~t--y~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~~ltr~ 171 (1051)
T KOG0210|consen 94 FVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLST--YWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYTKLTRD 171 (1051)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhh--hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhheeeccC
Confidence 3455666667888888888888887776653322222 78888999999999999999999998775543322 221 1
Q ss_pred -----ceEEEECCeEEEEeCCCCCCCcEEEEcC
Q 005870 135 -----KGKVLRDGRWNEQDASILVPGDIISIKL 162 (672)
Q Consensus 135 -----~~~V~r~g~~~~i~~~~L~~GDiI~l~~ 162 (672)
+..-+.=|....+.-.+=+|-|.|.++.
T Consensus 172 ~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrT 204 (1051)
T KOG0210|consen 172 GTRREPSSDIKVGDVIIVHKDERVPADMILLRT 204 (1051)
T ss_pred CcccccccccccccEEEEecCCcCCcceEEEEc
Confidence 1222344778888889999999999975
No 197
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=63.75 E-value=25 Score=34.50 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=73.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC-CCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
+-||+.+-++.|+..|+++.++|+.+..+...-.+..+ +.. .+...++ |+..+- -.....|+
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~-~d~~~v---------------~~gKP~Pd 155 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVL-GDDPEV---------------KNGKPDPD 155 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCee-cCCccc---------------cCCCCCch
Confidence 45699999999999999999999997655544333333 321 1222222 222210 01223344
Q ss_pred hHHHHHHHHhhCC-CEEEEECCCccCHHHHhhCCeeEEcc-c--ccHHHhhccCEEEc
Q 005870 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIGIAVA-D--ATDAARSASDIVLT 625 (672)
Q Consensus 572 ~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~vgIamg-~--~~~~~k~~ad~v~~ 625 (672)
-=....+.+.... +.++++.|..+=+.|-++|+.-+-|- + -.....+.+++++.
T Consensus 156 i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~ 213 (222)
T KOG2914|consen 156 IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILE 213 (222)
T ss_pred HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecc
Confidence 4456667777777 88999999999999999998877664 2 22333344555543
No 198
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.65 E-value=16 Score=36.04 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=62.1
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH
Q 005870 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (672)
++..++++.||++|..+.++|-=.. ....+-..+|+... .+. ++.+.+.. .-.-.|.-=.
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~-fD~-vv~S~e~g-----------------~~KPDp~If~ 175 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAY-FDF-VVESCEVG-----------------LEKPDPRIFQ 175 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHh-hhh-hhhhhhhc-----------------cCCCChHHHH
Confidence 4556999999999988888874332 22255555665321 111 11110000 1111222235
Q ss_pred HHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEc-ccccHHHhh
Q 005870 575 EIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV-ADATDAARS 618 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIam-g~~~~~~k~ 618 (672)
..++.++.+.+.++++||. .||...-+.+|.---. .|+....++
T Consensus 176 ~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 176 LALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred HHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 6677788888899999998 8999999988875544 355444443
No 199
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=61.58 E-value=1.8e+02 Score=35.10 Aligned_cols=197 Identities=14% Similarity=0.077 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------------eEE----EECCeEEEEeCCCCCCCcEEEEcCCC
Q 005870 101 VGIITLLVINSTISFIEENNAGNAAAALMARLAPK------------GKV----LRDGRWNEQDASILVPGDIISIKLGD 164 (672)
Q Consensus 101 ~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~V----~r~g~~~~i~~~~L~~GDiI~l~~G~ 164 (672)
+.+++..+++.+.++..+ ++.++++++....... ..+ +.-|....+...|.+|-|.+.++ |+
T Consensus 96 ~iv~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g~ 173 (867)
T TIGR01524 96 LMVLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-AR 173 (867)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-cC
Confidence 334445556666666554 5555666665443221 122 22477899999999999999887 44
Q ss_pred eecccEEEEecCCeEEeccCcC--CCCccc-----ccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcc-cCC
Q 005870 165 IIPADARLLEGDPLKIDQSALT--GESLPV-----TKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDT-TNQ 236 (672)
Q Consensus 165 ~iPaD~~ll~g~~l~Vdes~LT--GEs~pv-----~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~-~~~ 236 (672)
-+-+|=-.+-|++.-|+-..-+ .+..|. .-..|..+.+|+...-=...+.=+..|.=.. .+.. .+. +.-
T Consensus 174 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~-~~~~t~l 250 (867)
T TIGR01524 174 DLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI--AATE-RRGQTAF 250 (867)
T ss_pred ceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH--HhhC-CCCCCcH
Confidence 4556766666665333322111 011111 1347888888865432222222222232111 1111 111 111
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHH
Q 005870 237 VGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (672)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~ 303 (672)
.....+....+..+.+.+..+.+++..+... .....+..++..++..+.++.|.++++++..+...
T Consensus 251 q~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~ 316 (867)
T TIGR01524 251 DKGVKSVSKLLIRFMLVMVPVVLMINGLMKG-DWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAIN 316 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheehHHHhcC-CHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 1223444444444333222222222211111 11123344566678888889999999988887644
No 200
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=61.09 E-value=38 Score=33.33 Aligned_cols=86 Identities=12% Similarity=0.037 Sum_probs=53.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHH----HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
+-|++.+.++...+.|.+|.-+|.|.... +..-.++.|++....+... +-+.
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~l------------------------lkk~ 178 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLL------------------------LKKD 178 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceE------------------------EeeC
Confidence 45899999999999999999999998654 3344556677532111111 1110
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhC
Q 005870 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 603 (672)
-..|..--+..++.-+.|+.|||..+|-......
T Consensus 179 -~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 179 -KKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred -CCcHHHHHHHHhhccceeeEecCchhhhcchhhh
Confidence 1112222223333557899999999997765443
No 201
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=60.05 E-value=1e+02 Score=37.37 Aligned_cols=208 Identities=15% Similarity=0.116 Sum_probs=115.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------eEE----EECCeEEEEeCCCCCCCcEEEEcCCCe
Q 005870 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPK------GKV----LRDGRWNEQDASILVPGDIISIKLGDI 165 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~------~~V----~r~g~~~~i~~~~L~~GDiI~l~~G~~ 165 (672)
++...+.++++..+......++..++.++++++....... ..+ +.-|....+...|.+|-|...|+..+
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~- 183 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD- 183 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-
Confidence 4444555555655566888888888877777776654321 111 23477899999999999999999887
Q ss_pred ecccEEEEecCCeEEeccCc--CCCCcccc---c---CCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccCCC
Q 005870 166 IPADARLLEGDPLKIDQSAL--TGESLPVT---K---GPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQV 237 (672)
Q Consensus 166 iPaD~~ll~g~~l~Vdes~L--TGEs~pv~---k---~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 237 (672)
.-+|=-.|.|++.-|+-... +.|..|.. + ..|..|.+|+-..--...|.-+..|..+..-+-.+....+ -.
T Consensus 184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~-l~ 262 (917)
T COG0474 184 LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTP-LQ 262 (917)
T ss_pred ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCc-HH
Confidence 56666666666533332221 22333333 3 3577788777433222334445555444332221111111 11
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHH
Q 005870 238 GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (672)
Q Consensus 238 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~ 305 (672)
..+.+....+..+.+...++.++...+.........+..++.-+++++.-+.|..+-+++.++...-+
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 23445555555554444333333333321111122344566677778888888888777777666543
No 202
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=59.42 E-value=10 Score=42.29 Aligned_cols=148 Identities=17% Similarity=0.139 Sum_probs=85.9
Q ss_pred ECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCc---------
Q 005870 140 RDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGE--------- 210 (672)
Q Consensus 140 r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~--------- 210 (672)
+-|....+...|.+|-|.+.++- ..-+|--.+.|+..-+.-. .|+. ...|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 34788999999999999999966 5556666677776333322 1432 24678888888765321
Q ss_pred eEEEEEEecccccchhhhhhhcccCCCChHHHHH-HHHHHHHHHHHHHHHHHHHHHHhh--ccCccccchhhHHHHHHHh
Q 005870 211 IEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVL-TAIGNFCICSIAVGMIVEIIVMYP--IQDREYRPGIDNLLVLLIG 287 (672)
Q Consensus 211 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 287 (672)
..+.++++|.++.- .+ .....+.. ..+..+.+.+.++.++......+. .....+..++..++....+
T Consensus 125 ~i~~~v~~~~~~k~-~~---------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETKT-PL---------QPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCCC-ch---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 23445567766521 11 11223333 333333332222222222222111 0223455667788888999
Q ss_pred hcCCcchHHHHHHHHHHH
Q 005870 288 GIPIAMPTVLSVTMAIGS 305 (672)
Q Consensus 288 ~~P~~L~~~~~~~~~~~~ 305 (672)
++|.++|++...+.....
T Consensus 195 aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLA 212 (499)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 999999999988877654
No 203
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=59.41 E-value=1.9e+02 Score=34.23 Aligned_cols=188 Identities=15% Similarity=0.075 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-----CCc-eEE----EECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCe
Q 005870 109 INSTISFIEENNAGNAAAALMARL-----APK-GKV----LRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPL 178 (672)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~l~~~~-----~~~-~~V----~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l 178 (672)
+..+..-+...+.-+++.++.... ..+ ..+ +.-|....+...|.+|-|-+.++. +..-+|=-.+-|+..
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g-~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEG-DYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEec-CceEEEcccccCCcc
Confidence 334444455555555566553322 111 122 234778899999999999998863 334445555555543
Q ss_pred EEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhh-cccCCCChHHHHHHHHHHHHHHHHHH
Q 005870 179 KIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DTTNQVGHFQKVLTAIGNFCICSIAV 257 (672)
Q Consensus 179 ~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 257 (672)
-|+-. .|. .-..|..+-+|+...--...+.=+..|.=..+ +.+.. ..+.-.....+....+..+.+...++
T Consensus 149 PV~K~--~~~----~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~l--v~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i 220 (755)
T TIGR01647 149 PVTKK--TGD----IAYSGSTVKQGEAEAVVTATGMNTFFGKAAAL--VQSTETGSGHLQKILSKIGLFLIVLIGVLVLI 220 (755)
T ss_pred ceEec--cCC----eeeccCEEEccEEEEEEEEcCCccHHHHHHHH--hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 23321 121 12345566666543321112222222211100 00001 11111123444555555443333333
Q ss_pred HHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHH
Q 005870 258 GMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (672)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~ 305 (672)
.+++.++.........+..++..++..+.++.|.++++++.++.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~a 268 (755)
T TIGR01647 221 ELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELA 268 (755)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHH
Confidence 333222211111112344567778888999999999999988876544
No 204
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.35 E-value=42 Score=34.58 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=30.7
Q ss_pred ccCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHHH------HHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~a------~~ia~~~gi~~ 533 (672)
+.++++++.++.++.+++.|++. ++.-||++... ...|+++||..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 65 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRS 65 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 45667888889999998888764 34457776433 34566778754
No 205
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=57.90 E-value=49 Score=34.56 Aligned_cols=50 Identities=16% Similarity=0.191 Sum_probs=39.5
Q ss_pred EEEEeeccCCCCcchHHHHHHHHhC----CCcEEEEcCCc---HHH-HHHHHHHhCCC
Q 005870 483 FMGLMPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---LAI-GKETGRRLGMG 532 (672)
Q Consensus 483 ~lG~i~~~d~~r~~~~~~I~~l~~~----Gi~v~~~TGd~---~~~-a~~ia~~~gi~ 532 (672)
+=|++.-.+++-+++.++++.|++. |+++..+|-.. ... +..+.+.+|+.
T Consensus 7 ~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 7 IDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 4477888889999999999999998 99999999554 333 45556778874
No 206
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=56.97 E-value=1.7e+02 Score=35.43 Aligned_cols=158 Identities=12% Similarity=0.004 Sum_probs=78.4
Q ss_pred CCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCc------------CCCCcc-----cccCCCCcceec
Q 005870 141 DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSAL------------TGESLP-----VTKGPGDGVYSG 203 (672)
Q Consensus 141 ~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~L------------TGEs~p-----v~k~~~~~v~aG 203 (672)
-|....+...|.+|-|.+.++. +-+-+|=-.+-|++.-|+-... .++..+ -.-..|..+.+|
T Consensus 174 ~GDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G 252 (903)
T PRK15122 174 PGDIVHLSAGDMIPADVRLIES-RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSG 252 (903)
T ss_pred CCCEEEECCCCEEeeeEEEEEc-CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEee
Confidence 4788999999999999998874 3345565555565533433321 122211 123568888888
Q ss_pred eeeeeCceEEEEEEecccccchhhhh-hhccc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhH
Q 005870 204 STCKQGEIEAVVIATGVHTFFGKAAH-LVDTT--NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280 (672)
Q Consensus 204 t~v~~g~~~~~V~~tG~~T~~g~i~~-~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (672)
+...--...+.=+..|.=... +.. ..+.+ .+...+.+.+..++.++++++++...+ .. ......+..++..
T Consensus 253 ~~~~~V~atG~~T~~gkI~~~--v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~---~~-~~~~~~l~~aisl 326 (903)
T PRK15122 253 TATAVVVATGSRTYFGSLAKS--IVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF---TK-GDWLEALLFALAV 326 (903)
T ss_pred eEEEEEEEeccccHhhHHHHH--hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---cc-CCHHHHHHHHHHH
Confidence 754322222222222211110 000 01111 111234455555544433322221111 11 0111223345666
Q ss_pred HHHHHHhhcCCcchHHHHHHHHHHH
Q 005870 281 LLVLLIGGIPIAMPTVLSVTMAIGS 305 (672)
Q Consensus 281 ~~~~l~~~~P~~L~~~~~~~~~~~~ 305 (672)
++....++.|..+++++..+....+
T Consensus 327 ~V~~~Pe~Lp~~vt~~La~g~~~ma 351 (903)
T PRK15122 327 AVGLTPEMLPMIVSSNLAKGAIAMA 351 (903)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHH
Confidence 7888888999999988887765433
No 207
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=56.94 E-value=1.4e+02 Score=26.32 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=25.1
Q ss_pred HHHHHHHhhCCCEEEEECCCcc--CHHHHhhCCeeEEcc
Q 005870 574 YEIVKRLQARKHICGMTGDGVN--DAPALKKADIGIAVA 610 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~N--D~~al~~A~vgIamg 610 (672)
..+++.+ .+-+.+...|-|.| |.++++.-||-++=.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 4555666 33467888999988 788888888888764
No 208
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=56.93 E-value=20 Score=33.55 Aligned_cols=92 Identities=14% Similarity=0.163 Sum_probs=51.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcC-CcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005870 493 PRHDSAETIRRALNLGVNVKMITG-DQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TG-d~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
+-|+++++|+.|++.|+++.++|- +.+..|+.+.+.+++......... ..+. --+...-|.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~--------------~~~~----F~~~eI~~g 107 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVP--------------LIEY----FDYLEIYPG 107 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C------------------------CC----ECEEEESSS
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCcccccccc--------------chhh----cchhheecC
Confidence 568999999999999999999995 778899999999998711000000 0000 012334455
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHHHhh
Q 005870 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKK 602 (672)
Q Consensus 572 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~ 602 (672)
.|..-.+.+++. -+.++++=|-.......+.
T Consensus 108 sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 108 SKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK 142 (169)
T ss_dssp -HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHT
T ss_pred chHHHHHHHHHhcCCChhHEEEecCchhcceeeEe
Confidence 666665555543 3457777776655555443
No 209
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=54.30 E-value=2.7e+02 Score=33.71 Aligned_cols=159 Identities=14% Similarity=0.058 Sum_probs=77.4
Q ss_pred CCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcC---CCCccc----ccCCCCcceeceeeeeCceEE
Q 005870 141 DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT---GESLPV----TKGPGDGVYSGSTCKQGEIEA 213 (672)
Q Consensus 141 ~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LT---GEs~pv----~k~~~~~v~aGt~v~~g~~~~ 213 (672)
-|....+...|.+|-|.+.++ |+-+-+|=-.+-|+..-|+-..-+ .+..+. .-..|..+.+|+...-=...+
T Consensus 185 pGDiV~l~~Gd~IPaDg~li~-g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG 263 (902)
T PRK10517 185 PGDIIKLAAGDMIPADLRILQ-ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATG 263 (902)
T ss_pred CCCEEEECCCCEEeeeEEEEE-cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEec
Confidence 477899999999999999887 444556666666665334332211 111111 134688888887543222222
Q ss_pred EEEEecccccchhhhhhhcc-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCc
Q 005870 214 VVIATGVHTFFGKAAHLVDT-TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIA 292 (672)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 292 (672)
.=+..|.=.. .+...-.. +.-.....+....+..+.+....+.+++..+.... ....+..++..++.....+.|..
T Consensus 264 ~~T~~GkI~~--~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~-~~~~l~~alsv~V~~~Pe~LP~~ 340 (902)
T PRK10517 264 ANTWFGQLAG--RVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGD-WWEAALFALSVAVGLTPEMLPMI 340 (902)
T ss_pred cccHHHHHHH--HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCC-HHHHHHHHHHHHHHHcccHHHHH
Confidence 2222222111 11111111 11112233444444433322222222221111110 11223345666777888889999
Q ss_pred chHHHHHHHHH
Q 005870 293 MPTVLSVTMAI 303 (672)
Q Consensus 293 L~~~~~~~~~~ 303 (672)
+++++..+...
T Consensus 341 vt~~la~g~~~ 351 (902)
T PRK10517 341 VTSTLARGAVK 351 (902)
T ss_pred HHHHHHHHHHH
Confidence 88888877543
No 210
>PLN02423 phosphomannomutase
Probab=53.27 E-value=19 Score=36.04 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=29.2
Q ss_pred EEeeccC-CCCcchHHHHHHHHhCCCcEEEEcCCcHHHH
Q 005870 485 GLMPLFD-PPRHDSAETIRRALNLGVNVKMITGDQLAIG 522 (672)
Q Consensus 485 G~i~~~d-~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a 522 (672)
|.+.-.| ++.+.+.++|++|++. ++++++|||.....
T Consensus 16 GTLl~~~~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~ 53 (245)
T PLN02423 16 GTLTAPRKEATPEMLEFMKELRKV-VTVGVVGGSDLSKI 53 (245)
T ss_pred CCCcCCCCcCCHHHHHHHHHHHhC-CEEEEECCcCHHHH
Confidence 4444334 5889999999999977 99999999976544
No 211
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=53.04 E-value=74 Score=32.14 Aligned_cols=90 Identities=11% Similarity=0.097 Sum_probs=49.5
Q ss_pred cCCCCcchHHHHHHHHhCCCc-EEEEcCCc-HHHHHHHHHHhC-CCCCCCCCcccccccccccCCCccHHHHhhccCeec
Q 005870 490 FDPPRHDSAETIRRALNLGVN-VKMITGDQ-LAIGKETGRRLG-MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~-v~~~TGd~-~~~a~~ia~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
-|-+-++..+.++.+++.|+. +.++|=.. .+....+++... +..- +...-.+|..
T Consensus 126 pDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~-vS~~GvTG~~--------------------- 183 (263)
T CHL00200 126 PDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYL-VSTTGVTGLK--------------------- 183 (263)
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEE-EcCCCCCCCC---------------------
Confidence 444456777888888888887 44555544 345556666553 3210 0011122211
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHh
Q 005870 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~ 601 (672)
...+++-..+++.+++.-..-+++|=|+|+....+
T Consensus 184 ~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~ 218 (263)
T CHL00200 184 TELDKKLKKLIETIKKMTNKPIILGFGISTSEQIK 218 (263)
T ss_pred ccccHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 01134446667777765455567899999655443
No 212
>PRK11507 ribosome-associated protein; Provisional
Probab=50.50 E-value=21 Score=27.80 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=23.2
Q ss_pred EEEECCeEEEEeCCCCCCCcEEEEcC
Q 005870 137 KVLRDGRWNEQDASILVPGDIISIKL 162 (672)
Q Consensus 137 ~V~r~g~~~~i~~~~L~~GDiI~l~~ 162 (672)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999999864
No 213
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=50.06 E-value=1.2e+02 Score=25.97 Aligned_cols=43 Identities=9% Similarity=0.208 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Q 005870 97 WQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVL 139 (672)
Q Consensus 97 ~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 139 (672)
|...+++++++++..++.+.-.+++++..+++.+.+.+--+|+
T Consensus 18 ~~~ll~lvii~~i~yf~~~RpqkK~~k~~~~~~~~Lk~Gd~Vv 60 (106)
T PRK05585 18 LSSLLPLVVFFAIFYFLIIRPQQKRQKEHKKMLSSLAKGDEVV 60 (106)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4444443333333334444445555555556555555444444
No 214
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=48.10 E-value=44 Score=31.31 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=57.4
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005870 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
.-++-|++.++|++.++.|+++.+-|.-+... +++=+.... ...+..++ .-|...+
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~A-----QkL~Fghs~----------------agdL~~lf---sGyfDtt 156 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKA-----QKLFFGHSD----------------AGDLNSLF---SGYFDTT 156 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchh-----HHHhhcccc----------------cccHHhhh---cceeecc
Confidence 45788999999999999999999988666432 222111100 00000000 0111111
Q ss_pred h------hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005870 570 P------EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 570 p------~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
- ..-.+|++........+++..|..+...|-+.+|+-.
T Consensus 157 iG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t 200 (229)
T COG4229 157 IGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLAT 200 (229)
T ss_pred ccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchhe
Confidence 1 1225677777777788999999999888876655443
No 215
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=47.76 E-value=2.1e+02 Score=34.54 Aligned_cols=198 Identities=12% Similarity=0.039 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CceEEE-----ECCeEEEEeCCCCCCCcEEEEcCCCeecccEEE
Q 005870 103 IITLLVINSTISFIEENNAGNAAAALMARLA-----PKGKVL-----RDGRWNEQDASILVPGDIISIKLGDIIPADARL 172 (672)
Q Consensus 103 ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~V~-----r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~l 172 (672)
+++.++++.+-++ ...+.-+++.++..... .+...+ .-|....+...|.+|-|.+.++.. ..-+|=-.
T Consensus 90 i~~~~~i~~~qe~-~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~ 167 (884)
T TIGR01522 90 ILIVVTVGFVQEY-RSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV-DLSIDESN 167 (884)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC-ceEEEccc
Confidence 3334444444444 55555556665543322 222222 237788999999999999999743 33356555
Q ss_pred EecCCeEEeccCc--CCCC-cc--c---ccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhc-ccCCCChHHHH
Q 005870 173 LEGDPLKIDQSAL--TGES-LP--V---TKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-TTNQVGHFQKV 243 (672)
Q Consensus 173 l~g~~l~Vdes~L--TGEs-~p--v---~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~-~~~~~~~~~~~ 243 (672)
+-|++.-|+-..- .++. .+ - .-..|..+.+|+...-=...+.=+..|.=... +.+... .+.-...+.+.
T Consensus 168 LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~~~~~kt~lq~~l~~l 245 (884)
T TIGR01522 168 LTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM--MQAIEKPKTPLQKSMDLL 245 (884)
T ss_pred ccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH--hccCCCCCCcHHHHHHHH
Confidence 6565533332211 1111 00 0 12467777777643321222222222321110 001111 11112234555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHH
Q 005870 244 LTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (672)
Q Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~ 305 (672)
...+....+.++++.+++.++.... ....+..++..+++.+.++.|.++++++.++.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 246 GKQLSLVSFGVIGVICLVGWFQGKD-WLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 5555544332222222332322111 112233456667778889999999998888876544
No 216
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=46.30 E-value=3.2e+02 Score=33.55 Aligned_cols=200 Identities=12% Similarity=0.043 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceE-E----EECCeEEEEeCCCCCCCcEEEEcCCCeeccc
Q 005870 100 FVGIITLLVINSTISFIEENNAGNAAAALMARL-----APKGK-V----LRDGRWNEQDASILVPGDIISIKLGDIIPAD 169 (672)
Q Consensus 100 ~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~-V----~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD 169 (672)
.+.++++..+.....-...++.-+++..+.... ..+.. + +.-|....+...+.+|.|.+.++... +-+|
T Consensus 110 i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~Vd 188 (997)
T TIGR01106 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVD 188 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEE
Confidence 344455555556666666666666666553321 11111 1 23478899999999999999998642 4455
Q ss_pred EEEEecCCeEEeccCcCCCCcccc----cCCCCcceeceeeeeCceEEEEEEecccccchhhhhhh-cccCCCChHHHHH
Q 005870 170 ARLLEGDPLKIDQSALTGESLPVT----KGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DTTNQVGHFQKVL 244 (672)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGEs~pv~----k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~-~~~~~~~~~~~~~ 244 (672)
=-.+.|++.-|.-..-..+..|.. -..|..+.+|+...--...|.=+..|.-...-+ +.- ..+.-...+++..
T Consensus 189 eS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~--~~~~~~~pl~~~~~~~~ 266 (997)
T TIGR01106 189 NSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLAS--GLENGKTPIAIEIEHFI 266 (997)
T ss_pred ccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhh--hcccCCCcHHHHHHHHH
Confidence 555666653332221110111211 125677777764221111222333332221100 111 1121123455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHH
Q 005870 245 TAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (672)
Q Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~ 303 (672)
+.+..+.+++.++.+++..+..+.+ ...+..++..+++.+..++|..+++++..+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 267 HIITGVAVFLGVSFFILSLILGYTW-LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 6666554433333322222222211 122334555666778889999999888877654
No 217
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=45.67 E-value=13 Score=28.63 Aligned_cols=26 Identities=31% Similarity=0.552 Sum_probs=14.6
Q ss_pred EEECCeEEEEeCCCCCCCcEEEEcCCC
Q 005870 138 VLRDGRWNEQDASILVPGDIISIKLGD 164 (672)
Q Consensus 138 V~r~g~~~~i~~~~L~~GDiI~l~~G~ 164 (672)
|..||+.+.-.-..|.+||+|.+ .|.
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HEETTB----SS----SSEEEEE-TTE
T ss_pred eEECCEEccccCCcCCCCCEEEE-CCE
Confidence 56789988889999999999999 443
No 218
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=45.10 E-value=12 Score=35.37 Aligned_cols=16 Identities=31% Similarity=0.194 Sum_probs=13.6
Q ss_pred EEeeccccccCCcccc
Q 005870 330 LCSDKTGTLTLNKLTV 345 (672)
Q Consensus 330 i~~DKTGTLT~~~~~v 345 (672)
+|||.+||||.+.+.+
T Consensus 1 v~fD~DGTL~~~~~~f 16 (192)
T PF12710_consen 1 VIFDFDGTLTDSDSGF 16 (192)
T ss_dssp EEEESBTTTBSSHHHH
T ss_pred eEEecCcCeecCCCch
Confidence 6999999999998533
No 219
>PLN02645 phosphoglycolate phosphatase
Probab=44.42 E-value=52 Score=34.18 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc---cccc-HHHh-----hccCEEEcCCChhHHHHHH
Q 005870 574 YEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADAT-DAAR-----SASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam---g~~~-~~~k-----~~ad~v~~~~~~~~i~~~i 636 (672)
..+.+.++...+.++||||.. +|+.+-+.||+--.. |..+ +... ..+|+++ +++..+.+.+
T Consensus 237 ~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 237 DYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 445556665677899999997 999999999964432 3222 2222 2478887 4455555443
No 220
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=44.39 E-value=12 Score=30.30 Aligned_cols=23 Identities=26% Similarity=0.421 Sum_probs=16.9
Q ss_pred EeCCCCCCCcEEEE-cCCCeeccc
Q 005870 147 QDASILVPGDIISI-KLGDIIPAD 169 (672)
Q Consensus 147 i~~~~L~~GDiI~l-~~G~~iPaD 169 (672)
+.-.+|.+||.|.+ ++||.||-=
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I 68 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKI 68 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceE
Confidence 34578999999988 579999963
No 221
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=44.13 E-value=65 Score=29.82 Aligned_cols=61 Identities=11% Similarity=0.125 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005870 441 SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 441 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
.....-|..+++.+++.|=-.++++-.. -.+.+.++++..++.|++++-+||++--
T Consensus 93 y~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG 148 (176)
T COG0279 93 YGYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKDGG 148 (176)
T ss_pred ccHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCCCc
Confidence 3445556677777777776555554322 2478999999999999999999999864
Q ss_pred HHHHH
Q 005870 521 IGKET 525 (672)
Q Consensus 521 ~a~~i 525 (672)
....+
T Consensus 149 ~~~~~ 153 (176)
T COG0279 149 KLAGL 153 (176)
T ss_pred ccccc
Confidence 44333
No 222
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=43.66 E-value=22 Score=35.24 Aligned_cols=56 Identities=23% Similarity=0.303 Sum_probs=28.9
Q ss_pred hhHHHHHHHHhhCC-------CEEEEECCCccCHHHHhhC------CeeEEccccc-HHHhhccCEEEcC
Q 005870 571 EHKYEIVKRLQARK-------HICGMTGDGVNDAPALKKA------DIGIAVADAT-DAARSASDIVLTE 626 (672)
Q Consensus 571 ~~K~~iv~~l~~~~-------~~v~~iGDg~ND~~al~~A------~vgIamg~~~-~~~k~~ad~v~~~ 626 (672)
..|...++.+-+.. ..++++||...|-.|++.. +++|-++..+ ..-..+|++-+.+
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 34888888776553 3699999999999999873 6677777543 2233456666544
No 223
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=43.40 E-value=1.3e+02 Score=27.46 Aligned_cols=20 Identities=20% Similarity=0.114 Sum_probs=15.4
Q ss_pred eEEEEeCCCCCCCcEEEEcC
Q 005870 143 RWNEQDASILVPGDIISIKL 162 (672)
Q Consensus 143 ~~~~i~~~~L~~GDiI~l~~ 162 (672)
+...+++..+.-|-+|+++.
T Consensus 97 ~~v~VNst~l~dG~iVki~~ 116 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIGD 116 (149)
T ss_pred heEEEecccccCCeEEEECC
Confidence 35667888888888888874
No 224
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=42.02 E-value=1.8e+02 Score=23.64 Aligned_cols=23 Identities=26% Similarity=0.309 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHhcCCceEEE
Q 005870 117 EENNAGNAAAALMARLAPKGKVL 139 (672)
Q Consensus 117 ~~~~~~~~~~~l~~~~~~~~~V~ 139 (672)
-.+++++..+++.+.+.+--+|+
T Consensus 23 pqkK~~k~~~~m~~~L~~Gd~Vv 45 (84)
T TIGR00739 23 PQRKRRKAHKKLIESLKKGDKVL 45 (84)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEE
Confidence 34444445455554444434443
No 225
>PF15584 Imm44: Immunity protein 44
Probab=41.25 E-value=12 Score=30.56 Aligned_cols=19 Identities=37% Similarity=0.436 Sum_probs=15.5
Q ss_pred CCcEEEEcCCCeecccEEE
Q 005870 154 PGDIISIKLGDIIPADARL 172 (672)
Q Consensus 154 ~GDiI~l~~G~~iPaD~~l 172 (672)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556788999999999975
No 226
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=40.57 E-value=51 Score=30.36 Aligned_cols=41 Identities=15% Similarity=0.076 Sum_probs=36.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
.+||++.+.++.|++. +++.+.|.-....|..+.+.++...
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 4799999999999955 9999999999999999999998753
No 227
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=38.85 E-value=41 Score=29.17 Aligned_cols=40 Identities=28% Similarity=0.361 Sum_probs=30.0
Q ss_pred CCcchHHHHHHHHhCCCc-EEEEcCCcHHHHHHHHHHhCCC
Q 005870 493 PRHDSAETIRRALNLGVN-VKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~-v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
..+.+.+.++++.+.|++ +|+.+|.....+...+++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 445788999999999997 8999998889999999998873
No 228
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=38.60 E-value=31 Score=30.18 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=54.0
Q ss_pred HHHHHcCCeEEEEEeeecCCCCC--CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCC-c-EEEEcCCcHHHHHHHHH
Q 005870 452 DKFAERGLRSLAVAYQEVPEGRK--DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-N-VKMITGDQLAIGKETGR 527 (672)
Q Consensus 452 ~~~~~~G~r~l~~a~~~l~~~~~--~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~-v~~~TGd~~~~a~~ia~ 527 (672)
.-+...|++|+.++-. +|.++. ...+.+-.++++-.......+.+++.++.|++.|. + .+++-|..+..-..-.+
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~ 99 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLK 99 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHH
Confidence 3467889999888754 222211 11123335777777777788899999999999977 3 45677776655566677
Q ss_pred HhCCC
Q 005870 528 RLGMG 532 (672)
Q Consensus 528 ~~gi~ 532 (672)
+.|++
T Consensus 100 ~~G~d 104 (122)
T cd02071 100 EMGVA 104 (122)
T ss_pred HCCCC
Confidence 88975
No 229
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=37.00 E-value=83 Score=26.45 Aligned_cols=30 Identities=27% Similarity=0.522 Sum_probs=24.2
Q ss_pred eEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 005870 136 GKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (672)
Q Consensus 136 ~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~i 166 (672)
=+|.-||+.. -|+.++++||+|.|.-|...
T Consensus 34 GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 34 GRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 3566688766 79999999999999988654
No 230
>COG5547 Small integral membrane protein [Function unknown]
Probab=36.85 E-value=1.7e+02 Score=21.81 Aligned_cols=48 Identities=21% Similarity=0.367 Sum_probs=23.8
Q ss_pred HHHHHHhHHH--HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 005870 65 FLGFMWNPLS--WVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120 (672)
Q Consensus 65 ~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~ 120 (672)
++++++.|.. .+.++.+++.+.++ .|- .+.++++.+++.....+.+++
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwK-tilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWK-TILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 4556666654 23333333333332 333 334445556667777766654
No 231
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.30 E-value=1.7e+02 Score=30.17 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=29.2
Q ss_pred ccCCCCcchHHHHHHHHhC-CCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~-Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
+.++++++.++-++.+++. |++. ++..||++.. ....|+++||..
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 3455677888888888776 6553 4556777643 334567778754
No 232
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=35.90 E-value=1.5e+02 Score=27.81 Aligned_cols=107 Identities=18% Similarity=0.131 Sum_probs=65.9
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHH-HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH
Q 005870 496 DSAETIRRALNLGVNVKMITGDQLA-IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~~~-~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (672)
|..++++.+++.|-++.+++=++.. ....+.+.+|+.- ..+.-.++++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-----------------------------~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-----------------------------KIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-----------------------------EEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-----------------------------EEEEECCHHHHH
Confidence 5666777777667677776655443 3566666666531 234445677778
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHH
Q 005870 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~ 648 (672)
..++.++..|- -+.+|++.- +...+.. --..++...+.+++..++.+++++.+..++
T Consensus 116 ~~i~~~~~~G~-~viVGg~~~-~~~A~~~---------------gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGV-DVIVGGGVV-CRLARKL---------------GLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHHH-HHHHHHT---------------TSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-cEEECCHHH-HHHHHHc---------------CCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 88888888884 446676531 2222221 223567777899999999999999887764
No 233
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=34.62 E-value=1.5e+02 Score=29.34 Aligned_cols=37 Identities=24% Similarity=0.290 Sum_probs=19.8
Q ss_pred cccccccCCCH---HHHHHHcCCCCCCCCHHHHHHHHHhcCC
Q 005870 13 KETVDLENIPI---EEVFENLRCSREGLSSQAAEERLSIFGY 51 (672)
Q Consensus 13 ~~~~~~~~~~~---~~~~~~l~~~~~GL~~~~~~~r~~~~G~ 51 (672)
.|+++....|- +|+.+.+. .+|++.+++++-.+..-+
T Consensus 87 re~~~i~~~p~~e~~el~~iy~--~~G~~~~~a~~~~~~l~~ 126 (234)
T cd02433 87 DERRELRKHPLEEAAELALIYR--AKGLDEEEAKRVASQLMN 126 (234)
T ss_pred HHHHHhhhCcHHHHHHHHHHHH--HcCCCHHHHHHHHHHHHh
Confidence 33444444443 33333332 579999888755544443
No 234
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=34.58 E-value=93 Score=24.17 Aligned_cols=31 Identities=19% Similarity=0.101 Sum_probs=23.4
Q ss_pred CceEEEECCeEEEEe---CCCCCCCcEEEEcCCC
Q 005870 134 PKGKVLRDGRWNEQD---ASILVPGDIISIKLGD 164 (672)
Q Consensus 134 ~~~~V~r~g~~~~i~---~~~L~~GDiI~l~~G~ 164 (672)
..+.|-.+|..++++ ..++.|||-|.+..|-
T Consensus 17 ~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 17 GMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 457788889888885 5568899999999984
No 235
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=34.36 E-value=34 Score=21.39 Aligned_cols=15 Identities=40% Similarity=0.627 Sum_probs=13.1
Q ss_pred CCCCCHHHHHHHHHh
Q 005870 34 REGLSSQAAEERLSI 48 (672)
Q Consensus 34 ~~GL~~~~~~~r~~~ 48 (672)
..|||.+|+.+|+..
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999874
No 236
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.74 E-value=1.4e+02 Score=30.62 Aligned_cols=62 Identities=13% Similarity=0.235 Sum_probs=34.4
Q ss_pred ecccChhhHHHHHHHHhh--CCCEEEEECC-CccCHH---HHhhCCeeEEcc-ccc---HHHhhccCEEEcC
Q 005870 565 FAGVFPEHKYEIVKRLQA--RKHICGMTGD-GVNDAP---ALKKADIGIAVA-DAT---DAARSASDIVLTE 626 (672)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~--~~~~v~~iGD-g~ND~~---al~~A~vgIamg-~~~---~~~k~~ad~v~~~ 626 (672)
|.=+||.-=.++++.++. .|+.++++|- |.-=.| +|..+|.-+.+- +.+ +..-..||+++.-
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 445566555555555443 3788889998 444333 455566655553 212 2233467877653
No 237
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=33.58 E-value=42 Score=29.05 Aligned_cols=80 Identities=14% Similarity=0.211 Sum_probs=53.7
Q ss_pred HHHHHcCCeEEEEEeeecCCCCC--CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCC-c-EEEEcCCcHHHHHHHHH
Q 005870 452 DKFAERGLRSLAVAYQEVPEGRK--DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-N-VKMITGDQLAIGKETGR 527 (672)
Q Consensus 452 ~~~~~~G~r~l~~a~~~l~~~~~--~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~-v~~~TGd~~~~a~~ia~ 527 (672)
.-+...|++|+.+... ++.++. ...+.+..++|+-....+--+.+++.++.+++.+- . .+++-|.........++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 4557799999877633 332221 11233446788877767777889999999999976 4 46777876655456788
Q ss_pred HhCCC
Q 005870 528 RLGMG 532 (672)
Q Consensus 528 ~~gi~ 532 (672)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88875
No 238
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=32.64 E-value=3.2e+02 Score=23.48 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=24.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
-.+++.++++.++++|++++.+|+.+..
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3468899999999999999999997653
No 239
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=32.09 E-value=76 Score=32.39 Aligned_cols=49 Identities=20% Similarity=0.308 Sum_probs=39.1
Q ss_pred EEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH---HhCCC
Q 005870 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMG 532 (672)
Q Consensus 484 lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~---~~gi~ 532 (672)
=|++-..+.+-|++.++++.|++.|-++.++|..+..+-+..++ ++|+.
T Consensus 30 DGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 30 DGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 37777788899999999999999999999999888665555544 45654
No 240
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=31.79 E-value=1.4e+02 Score=30.02 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCCCCCCC--Ccc-cccccccccCCCccHHHHhhccCeec
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMGTNMYP--SSA-LLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
+.+++++.|+.|++.|+.|.-+|.+.+....... +++||+-.... ... +....... ...-.-.+.+-..|+
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~---~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDS---ALSRAPSFYDGILFT 158 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccC---CCCCCceeecCeEEe
Confidence 4679999999999999999999999976544443 34677532110 000 00000000 000000000111122
Q ss_pred ccChhhHHHHHHH----HhhCCCEEEEECCCccCHHHHhh
Q 005870 567 GVFPEHKYEIVKR----LQARKHICGMTGDGVNDAPALKK 602 (672)
Q Consensus 567 ~~~p~~K~~iv~~----l~~~~~~v~~iGDg~ND~~al~~ 602 (672)
.-.+|...... +....+.|.++-|....+..+..
T Consensus 159 --~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~ 196 (252)
T PF11019_consen 159 --GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEK 196 (252)
T ss_pred --CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHH
Confidence 23456555443 34456789999999888876544
No 241
>PRK15108 biotin synthase; Provisional
Probab=31.58 E-value=5.7e+02 Score=26.95 Aligned_cols=118 Identities=10% Similarity=0.051 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCC-CC--cchHHHHHHHHhCCCcEEEEcCCcHH
Q 005870 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP-PR--HDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 444 ~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~-~r--~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
.+++.+........|.+-++ +..+.++| .+ +...+.++.+++.|+.+.+--|.-..
T Consensus 78 ~eEI~~~a~~~~~~G~~~i~---------------------i~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G~ls~ 136 (345)
T PRK15108 78 VEQVLESARKAKAAGSTRFC---------------------MGAAWKNPHERDMPYLEQMVQGVKAMGLETCMTLGTLSE 136 (345)
T ss_pred HHHHHHHHHHHHHcCCCEEE---------------------EEecCCCCCcchHHHHHHHHHHHHhCCCEEEEeCCcCCH
Confidence 45566666666777766432 22332344 23 56778888888888887654465444
Q ss_pred HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEE---EECCCccCH
Q 005870 521 IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICG---MTGDGVNDA 597 (672)
Q Consensus 521 ~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~---~iGDg~ND~ 597 (672)
....--++.|++.-...... ...... .+...-+.+++.+.++.+++.|-.+. ++|=|..+-
T Consensus 137 e~l~~LkeAGld~~n~~leT--------------~p~~f~--~I~~~~~~~~rl~~i~~a~~~G~~v~sg~i~GlgEt~e 200 (345)
T PRK15108 137 SQAQRLANAGLDYYNHNLDT--------------SPEFYG--NIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVK 200 (345)
T ss_pred HHHHHHHHcCCCEEeecccc--------------ChHhcC--CCCCCCCHHHHHHHHHHHHHcCCceeeEEEEeCCCCHH
Confidence 44455566787631110000 001110 12334456778888888888775443 677765554
Q ss_pred H
Q 005870 598 P 598 (672)
Q Consensus 598 ~ 598 (672)
.
T Consensus 201 d 201 (345)
T PRK15108 201 D 201 (345)
T ss_pred H
Confidence 3
No 242
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=30.99 E-value=1.1e+02 Score=31.36 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=27.1
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHH-HHHHHHhCCC
Q 005870 495 HDSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGMG 532 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a-~~ia~~~gi~ 532 (672)
+++...=+.|++.|.+++++|.+....+ ....+..+..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 4666777889999999999998765433 3455555553
No 243
>PLN02591 tryptophan synthase
Probab=30.93 E-value=2.3e+02 Score=28.35 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=51.0
Q ss_pred CcchHHHHHHHHhCCCcE-EEEcCCcH-HHHHHHHHHh-CCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005870 494 RHDSAETIRRALNLGVNV-KMITGDQL-AIGKETGRRL-GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v-~~~TGd~~-~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
-++..+..+.+++.|+.. .++|-... ...+.+++.. |+.. .+...-.+|.. .-.|
T Consensus 117 ~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY-~Vs~~GvTG~~---------------------~~~~ 174 (250)
T PLN02591 117 LEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY-LVSSTGVTGAR---------------------ASVS 174 (250)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE-EeeCCCCcCCC---------------------cCCc
Confidence 367778888888888864 45555553 3455565543 2210 00001111110 0124
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCcc---CHHHHhhC-CeeEEccc
Q 005870 571 EHKYEIVKRLQARKHICGMTGDGVN---DAPALKKA-DIGIAVAD 611 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~N---D~~al~~A-~vgIamg~ 611 (672)
.+-...++.+++....-+++|=|++ |+..+... -=|+-+|+
T Consensus 175 ~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGS 219 (250)
T PLN02591 175 GRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGS 219 (250)
T ss_pred hhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECH
Confidence 4456667777776566677899999 44444433 22444443
No 244
>PRK10444 UMP phosphatase; Provisional
Probab=29.97 E-value=1.1e+02 Score=30.55 Aligned_cols=58 Identities=17% Similarity=0.130 Sum_probs=38.0
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc---cccc-HHHh---hccCEEEc
Q 005870 568 VFPEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADAT-DAAR---SASDIVLT 625 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam---g~~~-~~~k---~~ad~v~~ 625 (672)
-+|+-=..+++.++...+.++||||.. +|+.+-+.|++--.. |..+ +... ..+|+++.
T Consensus 175 P~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~ 240 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYP 240 (248)
T ss_pred CCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEEC
Confidence 334333455566665678899999997 899999999987544 3222 2232 34677774
No 245
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=29.59 E-value=41 Score=32.03 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=22.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH
Q 005870 492 PPRHDSAETIRRALNLGVNVKMITGDQL 519 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 519 (672)
++-|++.+++++|.+.|..++++|+++.
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 4568999999999999988888888864
No 246
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=29.50 E-value=88 Score=27.04 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=28.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi 531 (672)
-.+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 446889999999999999999998874 3335554453
No 247
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=29.18 E-value=1.2e+02 Score=24.28 Aligned_cols=46 Identities=13% Similarity=0.260 Sum_probs=36.0
Q ss_pred eeccCCCCcchHHHHHHHHhCCCcEEE-EcCCcHHHHHHHHHHhCCC
Q 005870 487 MPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 487 i~~~d~~r~~~~~~I~~l~~~Gi~v~~-~TGd~~~~a~~ia~~~gi~ 532 (672)
+.+.+...+.+.+..+.|++.|+++.+ ..+++...-...|.+.|+.
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 444566777888889999999999987 5677777777788888874
No 248
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=28.53 E-value=5.5e+02 Score=24.81 Aligned_cols=62 Identities=15% Similarity=0.117 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecC
Q 005870 106 LLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGD 176 (672)
Q Consensus 106 ~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~ 176 (672)
++++..+..+++.+...+..+.+.+...... .+...+ ++-|....+...+.+|=|.+.++..
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g 63 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNP-----QKKVTV----IRDGRWQKIPSSELVPGDIIILKAG 63 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS-----SEEEEE----EETTEEEEEEGGGT-TTSEEEEETT
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCC-----CccEEE----EeccccccchHhhccceeeeecccc
Confidence 4556666667777777777777665443322 121222 2337888899999999999988643
No 249
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=27.81 E-value=65 Score=26.48 Aligned_cols=27 Identities=30% Similarity=0.180 Sum_probs=21.2
Q ss_pred ceEEEECCeEEEEeCCCCCCCcEEEEc
Q 005870 135 KGKVLRDGRWNEQDASILVPGDIISIK 161 (672)
Q Consensus 135 ~~~V~r~g~~~~i~~~~L~~GDiI~l~ 161 (672)
...+.++|+.+.+..++|++||.|.+.
T Consensus 73 ~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 73 LLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 355666777678999999999999874
No 250
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.75 E-value=3.1e+02 Score=27.98 Aligned_cols=63 Identities=19% Similarity=0.308 Sum_probs=35.7
Q ss_pred eecccChhhHHHHHHHHhh--CCCEEEEECCC-ccCHH---HHhhCCeeEEc--cccc--HHHhhccCEEEcC
Q 005870 564 GFAGVFPEHKYEIVKRLQA--RKHICGMTGDG-VNDAP---ALKKADIGIAV--ADAT--DAARSASDIVLTE 626 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~--~~~~v~~iGDg-~ND~~---al~~A~vgIam--g~~~--~~~k~~ad~v~~~ 626 (672)
.|.=+||.-=.++++.++. .|..|..+|-| .-=-| +|...+--+.. .... ...-..||+++..
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 3455666655666665543 38899999998 33444 55444444444 3222 1223468887654
No 251
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=27.59 E-value=62 Score=23.99 Aligned_cols=25 Identities=28% Similarity=0.422 Sum_probs=18.6
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcH
Q 005870 495 HDSAETIRRALNLGVNVKMITGDQL 519 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~ 519 (672)
|+-+++++.|.++|++|-|.|-+..
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHHH
Confidence 5678999999999999999886543
No 252
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.58 E-value=1.3e+02 Score=30.89 Aligned_cols=45 Identities=18% Similarity=0.271 Sum_probs=30.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
+.+.++++.++.++.+++.|++. ++.-||++.. ....|+++||..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEA 63 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34567788888888888888754 4455877643 334677788754
No 253
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=27.06 E-value=42 Score=24.64 Aligned_cols=12 Identities=33% Similarity=0.667 Sum_probs=10.3
Q ss_pred CCCcEEEEcCCC
Q 005870 153 VPGDIISIKLGD 164 (672)
Q Consensus 153 ~~GDiI~l~~G~ 164 (672)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999874
No 254
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.03 E-value=1.4e+02 Score=30.50 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=30.0
Q ss_pred cCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 490 FDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
..+++++.++.++.|++.|++. ++.-||++.. -...|+++|+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 4567788888889988878764 4555777643 334577788754
No 255
>COG4996 Predicted phosphatase [General function prediction only]
Probab=26.33 E-value=1.4e+02 Score=26.55 Aligned_cols=56 Identities=18% Similarity=0.091 Sum_probs=45.1
Q ss_pred CCCCeEEEEEeeccCC------CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005870 477 PGGPWQFMGLMPLFDP------PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 477 ~e~~l~~lG~i~~~d~------~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
.+-+++.+.--.++|. +++++++.++.+++.|.-+..+|=..+..|....+.+++.
T Consensus 20 l~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 20 LEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred cCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 3444455555555554 7899999999999999999999999999999999999885
No 256
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.88 E-value=1.4e+02 Score=30.55 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=30.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
+.++++++.++.++.+++.|++. ++.-||++.. -...|+++|+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 44567788888899998888764 3445877643 334567788754
No 257
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=25.58 E-value=1.7e+02 Score=23.86 Aligned_cols=14 Identities=29% Similarity=0.235 Sum_probs=11.7
Q ss_pred CCCCCCcEEEEcCC
Q 005870 150 SILVPGDIISIKLG 163 (672)
Q Consensus 150 ~~L~~GDiI~l~~G 163 (672)
++|+|||-|....|
T Consensus 36 ~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 36 ESLKKGDKVLTIGG 49 (84)
T ss_pred HhCCCCCEEEECCC
Confidence 57899999888877
No 258
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.48 E-value=1.7e+02 Score=29.87 Aligned_cols=45 Identities=16% Similarity=0.237 Sum_probs=31.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
+..+++++.++.++.|++.|++. .+..||++.. ....|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34567788888999998888764 4556887653 334677788854
No 259
>PRK10671 copA copper exporting ATPase; Provisional
Probab=25.33 E-value=6.9e+02 Score=29.99 Aligned_cols=75 Identities=19% Similarity=0.184 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe-cCCeEEec
Q 005870 104 ITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-GDPLKIDQ 182 (672)
Q Consensus 104 i~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~-g~~l~Vde 182 (672)
..++++..+.++++++.+.++.+.+.++....-.. -.. ++-|....+...+..|=|.+++. |+.+-+|=
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~-----a~~-----~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg 359 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPT-----ARV-----VTDEGEKSVPLADVQPGMLLRLTTGDRVPVDG 359 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCE-----EEE-----EeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeE
Confidence 33445555666777777777777766554322211 111 12355566666777777777764 44344454
Q ss_pred cCcCCC
Q 005870 183 SALTGE 188 (672)
Q Consensus 183 s~LTGE 188 (672)
-.+.|+
T Consensus 360 ~v~~g~ 365 (834)
T PRK10671 360 EITQGE 365 (834)
T ss_pred EEEEce
Confidence 444443
No 260
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=25.31 E-value=1.7e+02 Score=35.34 Aligned_cols=70 Identities=10% Similarity=0.140 Sum_probs=47.6
Q ss_pred HHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeec-----------cCCCCcchHHHHHHHHhC-CCcEEEEc
Q 005870 448 HAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL-----------FDPPRHDSAETIRRALNL-GVNVKMIT 515 (672)
Q Consensus 448 ~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~-----------~d~~r~~~~~~I~~l~~~-Gi~v~~~T 515 (672)
...+..|.....|.+.+-|.. ++..+..- .-.+.++..++++.|.+. +..|+++|
T Consensus 580 ~~~~~~y~~a~~RLlfLDyDG-------------TLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVS 646 (934)
T PLN03064 580 EDAIQRYLQSNNRLLILGFNA-------------TLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLS 646 (934)
T ss_pred HHHHHHHHhccceEEEEecCc-------------eeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 445566777777888887765 33222111 112557889999999876 67899999
Q ss_pred CCcHHHHHHHHHHhC
Q 005870 516 GDQLAIGKETGRRLG 530 (672)
Q Consensus 516 Gd~~~~a~~ia~~~g 530 (672)
||...........++
T Consensus 647 GR~~~~Le~~fg~~~ 661 (934)
T PLN03064 647 GSDRSVLDENFGEFD 661 (934)
T ss_pred CCCHHHHHHHhCCCC
Confidence 999988877665444
No 261
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=25.29 E-value=6.2e+02 Score=26.08 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=25.7
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005870 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
.|+...+.+.- ..+++=+..+.+...+|+..+++
T Consensus 90 ~DTArVLsr~~----D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 90 KDTARVLSRMV----DAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHHhhh----heEEEecccHHHHHHHHHhCCCc
Confidence 45566665554 45888899999999999998874
No 262
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=24.20 E-value=2.2e+02 Score=24.42 Aligned_cols=23 Identities=26% Similarity=0.309 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHhcCCceEEEE
Q 005870 118 ENNAGNAAAALMARLAPKGKVLR 140 (672)
Q Consensus 118 ~~~~~~~~~~l~~~~~~~~~V~r 140 (672)
++++++..+++.+.+.+--+|+-
T Consensus 25 QkKr~K~~~~m~~~Lk~GD~VvT 47 (109)
T PRK05886 25 QRKAMQATIDLHESLQPGDRVHT 47 (109)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEE
Confidence 34444444555555544444443
No 263
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=24.13 E-value=4.6e+02 Score=22.52 Aligned_cols=14 Identities=36% Similarity=0.579 Sum_probs=10.9
Q ss_pred CCCCCCcEEEEcCC
Q 005870 150 SILVPGDIISIKLG 163 (672)
Q Consensus 150 ~~L~~GDiI~l~~G 163 (672)
++|+|||-|.-..|
T Consensus 37 ~~Lk~GD~VvT~gG 50 (109)
T PRK05886 37 ESLQPGDRVHTTSG 50 (109)
T ss_pred HhcCCCCEEEECCC
Confidence 57888888887776
No 264
>PRK04980 hypothetical protein; Provisional
Probab=24.09 E-value=91 Score=26.41 Aligned_cols=57 Identities=25% Similarity=0.375 Sum_probs=39.1
Q ss_pred CCceEEEECCeEEEEeCCCCCCCcEEEEc--CCCeecccEEEEecCCeEEec-----cCcCCCCccccc
Q 005870 133 APKGKVLRDGRWNEQDASILVPGDIISIK--LGDIIPADARLLEGDPLKIDQ-----SALTGESLPVTK 194 (672)
Q Consensus 133 ~~~~~V~r~g~~~~i~~~~L~~GDiI~l~--~G~~iPaD~~ll~g~~l~Vde-----s~LTGEs~pv~k 194 (672)
..+..-+||+. .+..+|||++.|. .+.+.-|+..+++-..+.+|| +...|+|.+.-|
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk 81 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELK 81 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHH
Confidence 34566677753 4679999999997 788999999999866433333 334466554444
No 265
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=24.08 E-value=60 Score=29.96 Aligned_cols=23 Identities=17% Similarity=0.310 Sum_probs=20.5
Q ss_pred CcchHHHHHHHHhCCCcEEEEcC
Q 005870 494 RHDSAETIRRALNLGVNVKMITG 516 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TG 516 (672)
.++++++|++|.+.|.+++|+|.
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999993
No 266
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=23.52 E-value=75 Score=27.54 Aligned_cols=28 Identities=21% Similarity=0.154 Sum_probs=23.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
-.+++.++++.+++.|.+++.+|+.+..
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 3457999999999999999999998653
No 267
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=23.04 E-value=8.2e+02 Score=24.98 Aligned_cols=27 Identities=22% Similarity=0.532 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeecC
Q 005870 444 ERRVHAVIDKFAERGLRSLAVAYQEVP 470 (672)
Q Consensus 444 ~~~~~~~~~~~~~~G~r~l~~a~~~l~ 470 (672)
-.+.+..+.++.++||.++.++.+.-|
T Consensus 99 V~kv~~~v~~~~~~Gy~iiiiG~~~Hp 125 (280)
T TIGR00216 99 VTKVHNAVKKYAKEGYHVILIGKKNHP 125 (280)
T ss_pred cHHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 346777889999999999999987655
No 268
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.96 E-value=1.8e+02 Score=29.83 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=28.9
Q ss_pred cCCCCcchHHHHHHHHhC-CCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 490 FDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~-Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
..+++++.++.++.+++. |++. ++..||++.. ....|+++||..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVS 63 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 445677888888888776 7654 4446777653 334667778754
No 269
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=22.91 E-value=52 Score=30.18 Aligned_cols=27 Identities=33% Similarity=0.395 Sum_probs=23.3
Q ss_pred hhhhcCccEEEeeccccccCCcccccc
Q 005870 321 IEEMAGMDVLCSDKTGTLTLNKLTVDK 347 (672)
Q Consensus 321 le~lg~v~~i~~DKTGTLT~~~~~v~~ 347 (672)
.+++.++..+++|=-||||.|++.+..
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG~ly~~~ 28 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDGKLYYDE 28 (170)
T ss_pred hhhhhhceEEEEeccceeecCeEEEcC
Confidence 467888999999999999999987753
No 270
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.89 E-value=1.9e+02 Score=29.54 Aligned_cols=45 Identities=18% Similarity=0.250 Sum_probs=30.2
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEE---EcCCcHH------HHHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNLGVNVKM---ITGDQLA------IGKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~---~TGd~~~------~a~~ia~~~gi~~ 533 (672)
+.++++++.++.++.+++.|++..+ .-||++. .....|+++|+..
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456777888888888888876543 3577654 3334677788754
No 271
>cd00210 PTS_IIA_glc PTS_IIA, PTS system, glucose/sucrose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Probab=22.53 E-value=98 Score=27.29 Aligned_cols=55 Identities=27% Similarity=0.441 Sum_probs=38.5
Q ss_pred CCcEEEEcCCC---eecccEEEEe----cCC--------------eEEeccCcCCCCcccccCCCCcceeceeeee
Q 005870 154 PGDIISIKLGD---IIPADARLLE----GDP--------------LKIDQSALTGESLPVTKGPGDGVYSGSTCKQ 208 (672)
Q Consensus 154 ~GDiI~l~~G~---~iPaD~~ll~----g~~--------------l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~ 208 (672)
.||=+-+.|.+ .-||||++.. +++ +-+|+..|.||-.-.....|+.|-+|+.+.+
T Consensus 25 lG~GvaI~P~~~~v~AP~~G~v~~i~~T~HA~~i~~~~G~eiLiHiGidTv~l~g~gF~~~vk~Gd~V~~G~~l~~ 100 (124)
T cd00210 25 MGDGFAIKPSDGKVVAPVDGTIVQIFPTKHAIGIESDSGVEILIHIGIDTVKLNGEGFTSHVEEGQRVKQGDKLLE 100 (124)
T ss_pred ccceEEEEccCCeEECcCCeEEEEEccCCCEEEEEeCCCcEEEEEeeeeeeecCCCceEEEecCCCEEcCCCEEEE
Confidence 34444444422 4599998873 121 3478999999998888888999999988775
No 272
>PRK13938 phosphoheptose isomerase; Provisional
Probab=22.28 E-value=1.6e+02 Score=28.35 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005870 442 DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 442 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
+..+.+.........+|--++++++.. -.+++.++++.+++.|++++.+||....
T Consensus 98 ~~~~~~~~~~~~~~~~~DllI~iS~SG------------------------~t~~vi~a~~~Ak~~G~~vI~iT~~~~s 152 (196)
T PRK13938 98 DYDTVFARALEGSARPGDTLFAISTSG------------------------NSMSVLRAAKTARELGVTVVAMTGESGG 152 (196)
T ss_pred cHHHHHHHHHHhcCCCCCEEEEEcCCC------------------------CCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 334445555555555555555555433 2578999999999999999999997653
No 273
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.24 E-value=1.8e+02 Score=29.80 Aligned_cols=44 Identities=18% Similarity=0.179 Sum_probs=28.0
Q ss_pred cCCCCcchHHHHHHHHhC-CCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 490 FDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~-Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
.++++++.++-++.+++. |++. ++.-||++.. ....|+++||..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (285)
T PRK14191 10 SYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDS 63 (285)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 455677888888888755 6653 3445777643 334566778754
No 274
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.19 E-value=1.7e+02 Score=29.87 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=29.7
Q ss_pred ccCCCCcchHHHHHHHHhCCCcE---EEEcCCcHH------HHHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLA------IGKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~------~a~~ia~~~gi~~ 533 (672)
+.+.++++.++.++.+++.|++. ++.-||++. .....|+++|+..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 44567778888888888777754 334577764 3345667778754
No 275
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair]
Probab=22.10 E-value=1.1e+02 Score=24.20 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=23.7
Q ss_pred eEEEECCeEEEEeCCCCCCCcEEEEcC
Q 005870 136 GKVLRDGRWNEQDASILVPGDIISIKL 162 (672)
Q Consensus 136 ~~V~r~g~~~~i~~~~L~~GDiI~l~~ 162 (672)
-.|..||+.+.-.-..|+.||+|.+..
T Consensus 37 g~V~vNGe~EtRRgkKlr~gd~V~i~~ 63 (73)
T COG2501 37 GEVKVNGEVETRRGKKLRDGDVVEIPG 63 (73)
T ss_pred CeEEECCeeeeccCCEeecCCEEEECC
Confidence 368889999999999999999999864
No 276
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=21.86 E-value=6.7e+02 Score=23.57 Aligned_cols=26 Identities=23% Similarity=0.248 Sum_probs=17.3
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHhcC
Q 005870 23 IEEVFENLRCSREGLSSQAAEERLSIFG 50 (672)
Q Consensus 23 ~~~~~~~l~~~~~GL~~~~~~~r~~~~G 50 (672)
++++.+++. ...++.+|+.+|+++--
T Consensus 70 v~~l~~~~~--~~~~~~~ea~~~L~~I~ 95 (193)
T PF06738_consen 70 VNRLSRRIV--AGQLSLEEAIERLDEID 95 (193)
T ss_pred HHHHHHHHh--cCCCCHHHHHHHHHHHh
Confidence 344444433 47889999999998643
No 277
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.77 E-value=1.9e+02 Score=29.46 Aligned_cols=45 Identities=18% Similarity=0.275 Sum_probs=30.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
+.++++++.++.++.+++.|++. ++.-||++.. ....|+++|+..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34567788888899998888764 4455877653 334677788854
No 278
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=20.63 E-value=9.9e+02 Score=26.88 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=66.3
Q ss_pred chHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH
Q 005870 496 DSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (672)
|...+|+.+++.+-++.+++=.+ ...+..++.-+++.- .++.-.++++=.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i-----------------------------~~~~~~~~~e~~ 135 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDI-----------------------------VQRSYVTEEDAR 135 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-----------------------------EEEEecCHHHHH
Confidence 67788888888777887777544 456667777777641 246666788888
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHH
Q 005870 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQR 645 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~ 645 (672)
..++.+++.|.. +++||+.- +.+-+.+|+ ..|+..+ .+++..+++.+..+.+-
T Consensus 136 ~~~~~l~~~G~~-~viG~~~~-~~~A~~~gl---------------~~ili~s-~esi~~a~~~A~~~~~~ 188 (526)
T TIGR02329 136 SCVNDLRARGIG-AVVGAGLI-TDLAEQAGL---------------HGVFLYS-ADSVRQAFDDALDVARA 188 (526)
T ss_pred HHHHHHHHCCCC-EEECChHH-HHHHHHcCC---------------ceEEEec-HHHHHHHHHHHHHHHHH
Confidence 999999998864 46788743 222233322 2233333 37777777777665543
No 279
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=20.59 E-value=9.8e+02 Score=27.02 Aligned_cols=70 Identities=16% Similarity=0.187 Sum_probs=50.9
Q ss_pred chHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH
Q 005870 496 DSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (672)
|...+|+.+++.+-++.+++=.+ ...+..++.-+++.- ..+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-----------------------------~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-----------------------------EQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-----------------------------EEEEecCHHHHH
Confidence 67788888888887888887555 456666777777641 245666778888
Q ss_pred HHHHHHhhCCCEEEEECCCcc
Q 005870 575 EIVKRLQARKHICGMTGDGVN 595 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg~N 595 (672)
..++.++..|.. +.+||+.-
T Consensus 146 ~~v~~lk~~G~~-~vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIE-AVVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCC-EEEcCchH
Confidence 999999998864 46788755
No 280
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.52 E-value=2.3e+02 Score=29.00 Aligned_cols=44 Identities=14% Similarity=0.171 Sum_probs=29.7
Q ss_pred cCCCCcchHHHHHHHHhCCCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 490 FDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
..+++++.++.++.+++.|++. ++.-||++.. -...|+++|+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456778888888888888764 4455777643 334677788853
No 281
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.51 E-value=89 Score=27.11 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=24.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHH
Q 005870 493 PRHDSAETIRRALNLGVNVKMITGDQLAI 521 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 521 (672)
-.+++.++++.+++.|.+++.+|+.....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 35789999999999999999999987543
No 282
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=20.32 E-value=3.1e+02 Score=26.32 Aligned_cols=55 Identities=13% Similarity=0.146 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHH
Q 005870 443 IERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (672)
Q Consensus 443 ~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 521 (672)
..+-+..++..+..+|=-++++++.. -.+++.++++.+|+.|.+++.+||.+...
T Consensus 95 ~~~~f~~ql~~~~~~gDvli~iS~SG------------------------~s~~v~~a~~~Ak~~G~~vI~IT~~~~s~ 149 (196)
T PRK10886 95 HDEVYAKQVRALGHAGDVLLAISTRG------------------------NSRDIVKAVEAAVTRDMTIVALTGYDGGE 149 (196)
T ss_pred HHHHHHHHHHHcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 34445555566566555555555432 24688999999999999999999976543
No 283
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.30 E-value=2.1e+02 Score=29.50 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=29.3
Q ss_pred ccCCCCcchHHHHHHHHhC-CCcE---EEEcCCcHHH------HHHHHHHhCCCC
Q 005870 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------GKETGRRLGMGT 533 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~-Gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 533 (672)
+.++++++.++.++.+++. |++. ++.-||++.. ....|+++||..
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~ 64 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIAS 64 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 3456777888888888766 6654 4455777643 334567778754
No 284
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=20.25 E-value=1.9e+02 Score=27.77 Aligned_cols=78 Identities=9% Similarity=0.116 Sum_probs=53.8
Q ss_pred HHHHHcCCeEEEEEeeecCCCCC--CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCc---EEEEcCCcHHHHHHHH
Q 005870 452 DKFAERGLRSLAVAYQEVPEGRK--DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIGKETG 526 (672)
Q Consensus 452 ~~~~~~G~r~l~~a~~~l~~~~~--~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~---v~~~TGd~~~~a~~ia 526 (672)
.-+...|++|+.++..- |.++. ...+.+-.++|+-....+-.+..++.++.|++.|.+ .+++-|.... ...+
T Consensus 106 ~~l~~~G~~vi~LG~~v-p~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~~--~~~~ 182 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDV-PIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPVT--QDWA 182 (197)
T ss_pred HHHHhCCcEEEECCCCC-CHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhcC--HHHH
Confidence 34677899999887542 22111 011233368888888888888999999999999874 4677776653 4678
Q ss_pred HHhCCC
Q 005870 527 RRLGMG 532 (672)
Q Consensus 527 ~~~gi~ 532 (672)
+++|-+
T Consensus 183 ~~~gad 188 (197)
T TIGR02370 183 DKIGAD 188 (197)
T ss_pred HHhCCc
Confidence 888865
No 285
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=20.13 E-value=1.1e+03 Score=27.42 Aligned_cols=84 Identities=11% Similarity=0.192 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchH-HHHHHHHhCCCcEEEEcCCcHH
Q 005870 442 DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSA-ETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 442 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~-~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
..+++..+.++++.+.|.++..+.-..-..... .. .-+|+-.+.-+..|+-| +.|+.+|+.| +++..|||-.+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~a--IA---~elGId~v~A~~~PedK~~iV~~lQ~~G-~~VaMtGDGvN 518 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAA--IA---AEAGVDDFLAEATPEDKLALIRQEQAEG-RLVAMTGDGTN 518 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHH--HH---HHcCCcEEEccCCHHHHHHHHHHHHHcC-CeEEEECCCcc
Confidence 456778888889999999987665322100000 00 01122112234455444 5678888888 45677899888
Q ss_pred HHHHHHHH-hCC
Q 005870 521 IGKETGRR-LGM 531 (672)
Q Consensus 521 ~a~~ia~~-~gi 531 (672)
.|-++++. +|+
T Consensus 519 DAPALa~ADVGI 530 (679)
T PRK01122 519 DAPALAQADVGV 530 (679)
T ss_pred hHHHHHhCCEeE
Confidence 77777652 444
Done!