Query 005875
Match_columns 672
No_of_seqs 568 out of 5039
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 09:48:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 4.4E-52 1.5E-56 435.1 17.6 252 380-652 46-321 (329)
2 4gt4_A Tyrosine-protein kinase 100.0 1.1E-51 3.8E-56 428.0 18.5 249 380-649 31-305 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.8E-52 6.1E-57 432.1 10.9 253 380-653 18-292 (299)
4 3omv_A RAF proto-oncogene seri 100.0 8.2E-51 2.8E-55 419.9 21.6 250 380-652 41-302 (307)
5 3hmm_A TGF-beta receptor type- 100.0 4.2E-51 1.4E-55 424.3 15.5 261 380-652 8-299 (303)
6 4fih_A Serine/threonine-protei 100.0 4.3E-50 1.5E-54 419.7 18.9 240 380-644 79-324 (346)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-49 3.9E-54 415.3 20.2 245 380-652 63-318 (336)
8 4ase_A Vascular endothelial gr 100.0 6.2E-50 2.1E-54 422.2 17.9 255 380-653 69-350 (353)
9 3fpq_A Serine/threonine-protei 100.0 3.7E-49 1.3E-53 404.5 21.5 241 381-644 32-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 3.7E-49 1.3E-53 413.2 18.3 241 380-644 29-277 (350)
11 4fie_A Serine/threonine-protei 100.0 8.8E-49 3E-53 419.7 19.4 240 380-644 156-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.4E-49 2.9E-53 403.9 13.8 237 380-643 37-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 8.4E-48 2.9E-52 391.1 19.3 237 380-644 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.9E-48 1.3E-52 398.9 12.4 237 380-643 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 1.7E-46 5.6E-51 388.1 16.4 240 380-644 10-280 (299)
16 4f9c_A Cell division cycle 7-r 100.0 2.8E-44 9.4E-49 381.4 20.4 187 380-578 26-250 (361)
17 4b99_A Mitogen-activated prote 100.0 1E-43 3.6E-48 381.0 24.1 249 380-644 59-345 (398)
18 2qkw_B Protein kinase; three-h 100.0 2.2E-42 7.4E-47 362.7 23.2 267 380-652 44-317 (321)
19 3v5w_A G-protein coupled recep 100.0 8.2E-43 2.8E-47 389.8 19.0 242 380-644 194-450 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 8.2E-43 2.8E-47 392.1 18.2 243 380-644 162-411 (573)
21 3soc_A Activin receptor type-2 100.0 1.7E-42 5.9E-47 363.7 16.5 256 380-651 29-319 (322)
22 3uim_A Brassinosteroid insensi 100.0 4.9E-42 1.7E-46 360.7 17.7 278 369-649 19-310 (326)
23 3p86_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 353.9 17.3 253 380-653 42-301 (309)
24 3s95_A LIMK-1, LIM domain kina 100.0 5.6E-41 1.9E-45 350.1 21.0 251 380-653 15-285 (310)
25 2psq_A Fibroblast growth facto 100.0 5.4E-41 1.9E-45 359.1 20.5 254 380-653 86-367 (370)
26 4hcu_A Tyrosine-protein kinase 100.0 1E-40 3.5E-45 340.7 21.2 247 380-651 15-267 (269)
27 3fxz_A Serine/threonine-protei 100.0 7.1E-41 2.4E-45 347.3 19.4 240 380-644 25-270 (297)
28 3gen_A Tyrosine-protein kinase 100.0 2.2E-40 7.5E-45 340.7 20.7 248 380-652 29-282 (283)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-40 5.4E-45 339.0 19.4 248 380-652 13-266 (268)
30 3kul_A Ephrin type-A receptor 100.0 3.2E-41 1.1E-45 354.5 14.4 251 380-655 54-318 (325)
31 2nru_A Interleukin-1 receptor- 100.0 1.1E-39 3.7E-44 339.7 25.5 270 369-650 14-306 (307)
32 3q4u_A Activin receptor type-1 100.0 1.2E-40 4E-45 345.7 17.5 251 380-648 13-300 (301)
33 2izr_A Casein kinase I isoform 100.0 5.7E-40 1.9E-44 345.7 22.9 253 380-652 14-283 (330)
34 2c30_A Serine/threonine-protei 100.0 5.6E-40 1.9E-44 344.4 21.9 239 381-644 51-295 (321)
35 3tt0_A Basic fibroblast growth 100.0 2E-40 6.7E-45 356.5 18.6 260 380-659 74-361 (382)
36 4eqm_A Protein kinase; transfe 100.0 1.2E-39 4.1E-44 337.5 22.5 263 380-664 16-289 (294)
37 1csn_A Casein kinase-1; phosph 100.0 1.4E-39 4.7E-44 337.2 22.9 255 380-653 15-286 (298)
38 1qcf_A Haematopoetic cell kina 100.0 8.3E-41 2.8E-45 367.6 14.3 248 380-652 193-446 (454)
39 3fe3_A MAP/microtubule affinit 100.0 5.1E-40 1.8E-44 345.5 19.6 238 380-644 20-265 (328)
40 3mdy_A Bone morphogenetic prot 100.0 8.7E-40 3E-44 344.8 21.1 256 380-653 42-334 (337)
41 1k9a_A Carboxyl-terminal SRC k 100.0 8.7E-40 3E-44 359.0 21.9 246 380-651 198-446 (450)
42 3niz_A Rhodanese family protei 100.0 7.1E-40 2.4E-44 342.1 19.3 253 380-644 26-301 (311)
43 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-41 1.4E-45 361.1 9.9 247 380-651 119-375 (377)
44 3dtc_A Mitogen-activated prote 100.0 5.3E-40 1.8E-44 335.5 17.1 245 380-648 12-271 (271)
45 2yab_A Death-associated protei 100.0 1.4E-39 4.6E-44 346.5 20.8 241 380-643 17-272 (361)
46 1opk_A P150, C-ABL, proto-onco 100.0 4.6E-40 1.6E-44 365.3 17.8 248 380-651 225-479 (495)
47 3zgw_A Maternal embryonic leuc 100.0 7.2E-40 2.5E-44 346.6 18.4 239 380-645 15-262 (347)
48 4dc2_A Protein kinase C IOTA t 100.0 2.4E-39 8.1E-44 348.0 22.7 245 380-643 57-318 (396)
49 1tki_A Titin; serine kinase, m 100.0 4.9E-40 1.7E-44 344.8 16.6 243 380-644 10-258 (321)
50 3t9t_A Tyrosine-protein kinase 100.0 1.5E-39 5.1E-44 331.3 19.7 247 380-651 13-265 (267)
51 4euu_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 336.4 24.6 264 380-651 14-310 (319)
52 3vhe_A Vascular endothelial gr 100.0 3.2E-40 1.1E-44 351.6 15.3 254 380-652 27-357 (359)
53 2qol_A Ephrin receptor; recept 100.0 1.6E-40 5.3E-45 355.9 12.8 247 380-651 50-310 (373)
54 3tki_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 343.6 17.5 241 380-644 12-262 (323)
55 3ugc_A Tyrosine-protein kinase 100.0 7.1E-40 2.4E-44 339.2 16.9 255 380-652 15-293 (295)
56 2y0a_A Death-associated protei 100.0 1.7E-39 5.8E-44 341.5 19.8 242 380-644 16-272 (326)
57 3kn6_A Ribosomal protein S6 ki 100.0 1.2E-39 3.9E-44 342.6 18.4 247 380-644 16-271 (325)
58 1o6l_A RAC-beta serine/threoni 100.0 3E-39 1E-43 340.7 21.6 238 380-644 10-261 (337)
59 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-40 9.6E-45 363.1 14.2 248 380-652 189-442 (452)
60 1nxk_A MAP kinase-activated pr 100.0 3.8E-39 1.3E-43 348.3 22.8 245 381-645 68-323 (400)
61 3poz_A Epidermal growth factor 100.0 6.3E-40 2.2E-44 345.0 15.5 246 380-651 20-279 (327)
62 3lb7_A RAF proto-oncogene seri 100.0 4.9E-39 1.7E-43 335.0 22.0 251 380-653 41-303 (307)
63 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-39 5.8E-44 342.4 18.6 237 380-644 14-259 (336)
64 3l9p_A Anaplastic lymphoma kin 100.0 2E-40 6.8E-45 354.4 11.5 252 380-652 76-347 (367)
65 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-39 3.9E-44 346.2 17.1 238 380-643 28-280 (353)
66 3op5_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 345.3 19.6 255 380-652 40-331 (364)
67 1t46_A HOMO sapiens V-KIT hard 100.0 1.9E-39 6.5E-44 338.5 17.8 255 380-653 28-310 (313)
68 3uzp_A CKI-delta, CKID, casein 100.0 2.9E-38 1E-42 326.8 25.8 254 380-653 14-283 (296)
69 3uc3_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 343.8 19.4 244 380-644 25-275 (361)
70 3a8x_A Protein kinase C IOTA t 100.0 6.9E-39 2.4E-43 339.3 21.4 245 380-643 14-275 (345)
71 1rjb_A FL cytokine receptor; k 100.0 1.8E-39 6.1E-44 343.8 16.8 256 380-654 50-338 (344)
72 3v8s_A RHO-associated protein 100.0 1.9E-39 6.4E-44 350.7 17.1 241 380-644 74-330 (410)
73 3llt_A Serine/threonine kinase 100.0 1.1E-39 3.7E-44 347.8 15.1 193 380-579 40-263 (360)
74 4f0f_A Serine/threonine-protei 100.0 5.9E-39 2E-43 330.8 20.0 247 380-648 24-287 (287)
75 1luf_A Muscle-specific tyrosin 100.0 2.1E-39 7.1E-44 342.9 17.0 252 380-652 52-337 (343)
76 3soa_A Calcium/calmodulin-depe 100.0 4.8E-39 1.6E-43 351.3 20.4 242 380-644 16-268 (444)
77 2zv2_A Calcium/calmodulin-depe 100.0 1.8E-39 6.2E-44 336.7 16.0 239 380-644 18-293 (298)
78 2bdw_A Hypothetical protein K1 100.0 6E-39 2E-43 342.2 20.5 242 380-644 34-285 (362)
79 3c0i_A Peripheral plasma membr 100.0 5.1E-39 1.8E-43 341.4 19.8 244 380-643 29-286 (351)
80 1ob3_A PFPK5, cell division co 100.0 1.5E-39 5.1E-44 335.7 15.2 253 380-644 7-281 (288)
81 3kex_A Receptor tyrosine-prote 100.0 2.2E-39 7.6E-44 340.4 16.5 246 380-651 18-277 (325)
82 1xjd_A Protein kinase C, theta 100.0 2.7E-39 9.3E-44 342.0 17.0 238 380-643 22-269 (345)
83 1fot_A TPK1 delta, CAMP-depend 100.0 6.1E-39 2.1E-43 335.8 19.3 238 380-644 11-259 (318)
84 3kmu_A ILK, integrin-linked ki 100.0 8.6E-39 2.9E-43 326.1 19.9 248 380-650 15-270 (271)
85 2h8h_A Proto-oncogene tyrosine 100.0 2E-39 6.9E-44 363.5 16.7 248 380-652 272-525 (535)
86 3qd2_B Eukaryotic translation 100.0 5.6E-39 1.9E-43 337.6 19.0 240 380-644 11-326 (332)
87 3qup_A Tyrosine-protein kinase 100.0 1.5E-39 5.2E-44 341.2 14.6 254 380-654 28-302 (323)
88 2pvf_A Fibroblast growth facto 100.0 3E-39 1E-43 340.8 16.9 255 380-654 40-322 (334)
89 2ivs_A Proto-oncogene tyrosine 100.0 2.9E-39 1E-43 337.3 16.6 251 380-651 28-312 (314)
90 1qpc_A LCK kinase; alpha beta 100.0 4.4E-39 1.5E-43 330.3 17.5 249 380-653 18-272 (279)
91 4fvq_A Tyrosine-protein kinase 100.0 2.9E-39 9.8E-44 333.3 16.1 248 380-653 13-278 (289)
92 3kfa_A Tyrosine-protein kinase 100.0 1.4E-39 4.7E-44 335.6 13.7 249 380-652 18-273 (288)
93 1mp8_A Focal adhesion kinase 1 100.0 1.9E-39 6.4E-44 333.6 14.6 246 380-651 20-277 (281)
94 4hgt_A Casein kinase I isoform 100.0 2.6E-38 9E-43 327.0 23.3 254 380-653 14-283 (296)
95 3gxj_A TGF-beta receptor type- 100.0 6.6E-41 2.3E-45 347.8 3.5 255 380-652 8-299 (303)
96 1u5q_A Serine/threonine protei 100.0 1.4E-38 4.7E-43 337.5 21.0 242 380-646 59-308 (348)
97 2eva_A TAK1 kinase - TAB1 chim 100.0 7.1E-39 2.4E-43 333.8 18.5 252 380-653 13-266 (307)
98 3p1a_A MYT1 kinase, membrane-a 100.0 7.4E-39 2.5E-43 334.4 18.6 237 380-644 62-305 (311)
99 2ac3_A MAP kinase-interacting 100.0 1.5E-38 5E-43 332.5 20.8 249 381-644 19-296 (316)
100 4aw2_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 350.3 17.4 244 380-644 79-339 (437)
101 1b6c_B TGF-B superfamily recep 100.0 1.1E-38 3.7E-43 337.3 19.7 255 380-652 47-338 (342)
102 1u59_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 332.1 16.0 247 381-653 16-275 (287)
103 2i0e_A Protein kinase C-beta I 100.0 8.6E-39 3E-43 339.3 18.9 239 380-644 25-277 (353)
104 4fr4_A YANK1, serine/threonine 100.0 9.6E-39 3.3E-43 342.1 19.4 240 380-643 20-271 (384)
105 3gni_B Strad alpha; kinase fol 100.0 2.5E-38 8.6E-43 341.0 22.7 261 380-649 30-341 (389)
106 2ozo_A Tyrosine-protein kinase 100.0 4.2E-39 1.4E-43 366.1 17.5 246 382-653 343-601 (613)
107 3lxp_A Non-receptor tyrosine-p 100.0 6E-39 2.1E-43 336.1 17.0 263 380-654 36-314 (318)
108 3g2f_A Bone morphogenetic prot 100.0 7.1E-39 2.4E-43 337.9 17.7 264 380-658 18-326 (336)
109 3g33_A Cell division protein k 100.0 1.2E-38 3.9E-43 332.2 18.8 255 380-644 14-297 (308)
110 3c1x_A Hepatocyte growth facto 100.0 4.8E-39 1.6E-43 344.1 16.2 250 380-654 94-359 (373)
111 3pls_A Macrophage-stimulating 100.0 8.7E-39 3E-43 331.1 17.6 249 380-653 26-290 (298)
112 1mqb_A Ephrin type-A receptor 100.0 1.6E-38 5.4E-43 335.1 19.9 249 380-653 49-312 (333)
113 2x4f_A Myosin light chain kina 100.0 4.4E-39 1.5E-43 344.5 15.8 246 381-648 95-349 (373)
114 2v62_A Serine/threonine-protei 100.0 5.7E-39 2E-43 340.3 16.3 255 380-651 42-329 (345)
115 4e5w_A Tyrosine-protein kinase 100.0 8.5E-39 2.9E-43 332.0 17.2 252 380-649 26-301 (302)
116 3a62_A Ribosomal protein S6 ki 100.0 2E-38 6.7E-43 333.6 19.7 238 380-644 22-277 (327)
117 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2E-38 6.9E-43 338.7 20.1 248 380-654 70-343 (365)
118 2qr7_A Ribosomal protein S6 ki 100.0 6.5E-39 2.2E-43 339.1 15.9 243 380-644 27-278 (342)
119 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-38 6.2E-43 327.7 18.9 248 380-650 29-288 (289)
120 4eut_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 342.1 20.4 265 380-652 14-311 (396)
121 3oz6_A Mitogen-activated prote 100.0 5E-39 1.7E-43 346.4 15.2 190 380-579 14-235 (388)
122 2w4o_A Calcium/calmodulin-depe 100.0 1.8E-38 6.1E-43 336.9 19.3 242 380-644 58-306 (349)
123 2xir_A Vascular endothelial gr 100.0 8E-39 2.7E-43 334.3 16.1 255 380-653 32-313 (316)
124 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-38 4.5E-43 337.7 17.9 238 380-644 46-294 (350)
125 1fvr_A Tyrosine-protein kinase 100.0 2.5E-38 8.7E-43 332.6 19.9 254 380-653 30-303 (327)
126 1kob_A Twitchin; kinase, intra 100.0 6.4E-39 2.2E-43 344.4 15.5 243 380-644 56-305 (387)
127 3f66_A Hepatocyte growth facto 100.0 1.8E-38 6.3E-43 328.9 18.5 249 380-653 30-294 (298)
128 2zmd_A Dual specificity protei 100.0 6.5E-38 2.2E-42 337.6 23.4 240 380-644 61-321 (390)
129 2acx_A G protein-coupled recep 100.0 2.6E-38 9E-43 352.8 20.8 244 380-644 189-445 (576)
130 3cok_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 326.4 17.0 239 380-644 16-263 (278)
131 4agu_A Cyclin-dependent kinase 100.0 1.2E-38 4E-43 332.5 16.7 256 380-644 8-285 (311)
132 3lzb_A Epidermal growth factor 100.0 8.7E-39 3E-43 336.3 15.8 246 380-651 20-279 (327)
133 3dbq_A Dual specificity protei 100.0 5.9E-38 2E-42 332.2 22.3 241 380-645 14-275 (343)
134 4fl3_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 363.5 18.1 244 381-651 375-632 (635)
135 3lm5_A Serine/threonine-protei 100.0 1.4E-38 4.6E-43 334.8 17.2 244 381-644 35-288 (327)
136 2vd5_A DMPK protein; serine/th 100.0 8.9E-39 3E-43 345.6 16.0 243 380-644 66-328 (412)
137 3o0g_A Cell division protein k 100.0 3.5E-38 1.2E-42 326.0 19.7 251 380-644 7-283 (292)
138 3ll6_A Cyclin G-associated kin 100.0 1.5E-38 5E-43 335.2 17.1 251 380-654 33-312 (337)
139 2pmi_A Negative RE, cyclin-dep 100.0 6.5E-39 2.2E-43 335.7 14.3 257 380-644 10-294 (317)
140 3ork_A Serine/threonine protei 100.0 1.1E-38 3.8E-43 332.9 15.9 256 380-658 17-289 (311)
141 3cc6_A Protein tyrosine kinase 100.0 1.3E-38 4.5E-43 327.2 16.2 246 380-651 17-274 (281)
142 3brb_A Proto-oncogene tyrosine 100.0 1.6E-38 5.4E-43 331.9 17.0 253 380-653 39-311 (313)
143 3bhy_A Death-associated protei 100.0 3.6E-38 1.2E-42 324.1 19.3 251 380-653 10-277 (283)
144 2a19_B Interferon-induced, dou 100.0 1.7E-38 5.7E-43 326.5 16.2 242 380-653 16-277 (284)
145 2a2a_A Death-associated protei 100.0 6.7E-38 2.3E-42 328.6 20.9 242 380-644 17-273 (321)
146 3lxl_A Tyrosine-protein kinase 100.0 8.4E-39 2.9E-43 336.3 13.6 256 380-653 28-306 (327)
147 3f3z_A Calcium/calmodulin-depe 100.0 3.4E-38 1.2E-42 323.3 17.6 241 380-644 14-262 (277)
148 3mtl_A Cell division protein k 100.0 1.2E-38 4E-43 334.8 14.5 261 380-652 7-292 (324)
149 2wqm_A Serine/threonine-protei 100.0 5.9E-38 2E-42 327.1 19.7 255 380-653 37-300 (310)
150 3sv0_A Casein kinase I-like; t 100.0 9.7E-38 3.3E-42 344.0 22.2 254 380-652 12-280 (483)
151 1xbb_A Tyrosine-protein kinase 100.0 1.5E-38 5.3E-43 328.5 14.9 244 382-652 24-281 (291)
152 2h34_A Serine/threonine-protei 100.0 1.4E-37 4.6E-42 324.5 21.9 250 380-653 39-299 (309)
153 2i1m_A Macrophage colony-stimu 100.0 6.8E-39 2.3E-43 337.7 12.1 254 380-652 51-328 (333)
154 3kvw_A DYRK2, dual specificity 100.0 2.5E-38 8.4E-43 345.1 16.9 194 380-580 102-304 (429)
155 1byg_A CSK, protein (C-termina 100.0 1.7E-38 5.8E-43 325.9 14.7 247 380-652 26-275 (278)
156 2y94_A 5'-AMP-activated protei 100.0 4.2E-38 1.4E-42 346.3 18.8 238 380-644 21-267 (476)
157 3fdn_A Serine/threonine-protei 100.0 3E-38 1E-42 324.2 16.5 238 380-644 14-258 (279)
158 3is5_A Calcium-dependent prote 100.0 2.2E-38 7.7E-43 326.4 15.5 243 380-643 27-278 (285)
159 2jii_A Serine/threonine-protei 100.0 8.5E-38 2.9E-42 332.1 20.4 255 380-653 47-339 (352)
160 3q60_A ROP5B; pseudokinase, tr 100.0 5.1E-39 1.7E-43 344.1 11.0 253 380-649 67-360 (371)
161 2yex_A Serine/threonine-protei 100.0 9.7E-38 3.3E-42 319.5 19.9 241 380-644 12-262 (276)
162 1wak_A Serine/threonine-protei 100.0 6.9E-38 2.4E-42 337.8 19.7 258 380-644 42-392 (397)
163 3kk8_A Calcium/calmodulin depe 100.0 8.4E-38 2.9E-42 321.5 19.3 242 380-644 11-262 (284)
164 1vzo_A Ribosomal protein S6 ki 100.0 3.8E-38 1.3E-42 335.2 17.2 244 380-645 59-323 (355)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 6.8E-38 2.3E-42 322.2 18.1 241 380-644 16-280 (289)
166 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.1E-38 2.8E-42 348.0 19.9 244 381-643 191-448 (543)
167 3ttj_A Mitogen-activated prote 100.0 6.5E-38 2.2E-42 344.9 18.7 253 380-644 67-356 (464)
168 2buj_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 330.5 14.9 255 380-654 34-310 (317)
169 2r5t_A Serine/threonine-protei 100.0 2.7E-38 9.3E-43 337.8 15.0 234 380-639 43-285 (373)
170 3dls_A PAS domain-containing s 100.0 5.6E-38 1.9E-42 331.1 17.2 232 380-644 29-275 (335)
171 3byv_A Rhoptry kinase; malaria 100.0 1.8E-39 6.3E-44 348.3 5.4 244 380-650 78-368 (377)
172 3hko_A Calcium/calmodulin-depe 100.0 4.7E-38 1.6E-42 332.9 16.0 251 380-648 31-337 (345)
173 1z57_A Dual specificity protei 100.0 7.7E-38 2.6E-42 329.7 17.5 254 380-644 19-329 (339)
174 4ejn_A RAC-alpha serine/threon 100.0 3.4E-38 1.2E-42 346.2 15.3 237 380-643 153-404 (446)
175 3i6u_A CDS1, serine/threonine- 100.0 1.8E-37 6.2E-42 337.4 20.8 242 380-644 140-400 (419)
176 2eue_A Carbon catabolite derep 100.0 9.6E-38 3.3E-42 319.7 17.5 237 380-644 18-263 (275)
177 3nsz_A CK II alpha, casein kin 100.0 3.4E-37 1.2E-41 324.2 22.0 250 380-644 41-320 (330)
178 1cm8_A Phosphorylated MAP kina 100.0 4.2E-38 1.4E-42 336.4 15.2 251 380-649 30-315 (367)
179 3mi9_A Cell division protein k 100.0 8.4E-38 2.9E-42 332.0 17.3 253 380-644 22-312 (351)
180 3rp9_A Mitogen-activated prote 100.0 6.1E-38 2.1E-42 345.4 16.6 189 380-578 58-298 (458)
181 2y7j_A Phosphorylase B kinase 100.0 2.5E-37 8.4E-42 330.2 20.8 242 381-644 100-360 (365)
182 4aaa_A Cyclin-dependent kinase 100.0 1.9E-37 6.6E-42 326.5 19.6 256 380-644 30-307 (331)
183 1p4o_A Insulin-like growth fac 100.0 5E-38 1.7E-42 329.4 14.9 251 380-651 30-300 (322)
184 3rgf_A Cyclin-dependent kinase 100.0 1.5E-37 5.1E-42 336.8 19.0 195 380-580 26-241 (405)
185 2vgo_A Serine/threonine-protei 100.0 3.5E-37 1.2E-41 317.1 20.6 238 380-644 19-263 (284)
186 1q8y_A SR protein kinase; tran 100.0 3.6E-37 1.2E-41 329.7 21.5 258 380-644 24-334 (373)
187 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-37 4.5E-42 326.7 17.5 243 380-644 29-287 (326)
188 2jam_A Calcium/calmodulin-depe 100.0 2.1E-37 7.3E-42 322.0 18.7 242 380-644 14-262 (304)
189 2w1i_A JAK2; chromosomal rearr 100.0 7.8E-38 2.7E-42 328.8 15.5 254 380-651 46-323 (326)
190 1t4h_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 316.7 21.3 242 380-644 31-283 (290)
191 1ua2_A CAK, cell division prot 100.0 9.3E-38 3.2E-42 331.1 15.9 254 380-644 15-292 (346)
192 3eqc_A Dual specificity mitoge 100.0 1.3E-37 4.4E-42 331.8 16.8 191 380-579 38-234 (360)
193 3mwu_A Calmodulin-domain prote 100.0 3.4E-37 1.2E-41 342.0 20.3 241 380-644 27-277 (486)
194 2vx3_A Dual specificity tyrosi 100.0 2.7E-37 9.1E-42 332.1 18.8 195 380-579 59-262 (382)
195 3a7i_A MST3 kinase, serine/thr 100.0 2.9E-37 1E-41 320.7 18.4 240 380-646 27-273 (303)
196 3pfq_A PKC-B, PKC-beta, protei 100.0 1.5E-37 5.1E-42 356.7 17.8 238 380-643 346-597 (674)
197 3com_A Serine/threonine-protei 100.0 3.4E-37 1.2E-41 321.8 18.8 240 380-643 34-278 (314)
198 3q5i_A Protein kinase; CDPK, m 100.0 3.4E-37 1.2E-41 343.5 19.7 241 380-644 41-302 (504)
199 2rku_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 321.9 15.2 238 380-644 20-266 (294)
200 2h6d_A 5'-AMP-activated protei 100.0 2E-37 6.8E-42 317.3 16.0 238 380-644 16-262 (276)
201 3nyv_A Calmodulin-domain prote 100.0 1.2E-37 4.1E-42 345.5 15.6 241 380-644 31-282 (484)
202 2clq_A Mitogen-activated prote 100.0 2.3E-37 7.9E-42 319.9 16.6 243 381-644 28-279 (295)
203 1u46_A ACK-1, activated CDC42 100.0 3.4E-38 1.2E-42 325.5 10.3 249 380-653 23-287 (291)
204 2yfx_A Tyrosine-protein kinase 100.0 1.7E-37 5.8E-42 326.3 15.7 252 380-652 35-306 (327)
205 3lij_A Calcium/calmodulin depe 100.0 3.6E-37 1.2E-41 342.4 18.7 245 380-648 42-298 (494)
206 2owb_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42 327.8 15.0 238 380-644 46-292 (335)
207 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.7E-38 1.9E-42 330.3 11.2 252 380-643 39-318 (329)
208 3fhr_A MAP kinase-activated pr 100.0 3.6E-37 1.2E-41 325.2 17.3 245 380-644 34-288 (336)
209 2r3i_A Cell division protein k 100.0 2.6E-37 8.9E-42 320.3 15.4 254 380-643 8-283 (299)
210 2j7t_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42 321.4 14.8 242 380-644 24-276 (302)
211 3pg1_A Mitogen-activated prote 100.0 8.9E-37 3.1E-41 325.4 19.8 250 380-644 27-317 (362)
212 3n9x_A Phosphotransferase; mal 100.0 1.3E-36 4.6E-41 331.9 21.6 187 380-576 31-253 (432)
213 3fme_A Dual specificity mitoge 100.0 4.7E-37 1.6E-41 316.7 17.1 249 380-648 12-273 (290)
214 2xrw_A Mitogen-activated prote 100.0 1.3E-36 4.3E-41 325.5 20.5 253 380-644 30-319 (371)
215 2fst_X Mitogen-activated prote 100.0 9.6E-38 3.3E-42 333.4 11.6 251 380-644 34-312 (367)
216 2w5a_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42 318.5 12.9 249 380-647 11-271 (279)
217 1phk_A Phosphorylase kinase; g 100.0 5.3E-37 1.8E-41 317.8 16.8 242 380-643 22-283 (298)
218 2ycf_A Serine/threonine-protei 100.0 2E-36 6.9E-41 317.4 21.3 241 380-643 15-274 (322)
219 1blx_A Cyclin-dependent kinase 100.0 8.6E-37 3E-41 320.4 18.4 254 380-643 16-296 (326)
220 3qyz_A Mitogen-activated prote 100.0 6E-37 2E-41 327.2 17.3 251 380-644 32-314 (364)
221 2eu9_A Dual specificity protei 100.0 6.3E-37 2.2E-41 325.1 17.3 253 380-643 24-333 (355)
222 2rio_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 335.7 16.4 245 380-643 20-295 (434)
223 2pml_X PFPK7, Ser/Thr protein 100.0 5.8E-37 2E-41 324.9 16.5 252 380-644 36-323 (348)
224 4e7w_A Glycogen synthase kinas 100.0 8.2E-37 2.8E-41 329.5 17.9 258 380-650 45-330 (394)
225 2vwi_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 323.4 10.7 253 380-644 20-288 (303)
226 3e3p_A Protein kinase, putativ 100.0 2.6E-36 8.8E-41 321.5 21.2 263 380-650 28-323 (360)
227 3an0_A Dual specificity mitoge 100.0 6.8E-37 2.3E-41 323.4 16.3 245 380-644 56-311 (340)
228 1j1b_A Glycogen synthase kinas 100.0 5.1E-37 1.7E-41 333.9 15.8 259 380-649 59-344 (420)
229 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.1E-37 1.1E-41 322.8 13.5 246 380-652 38-304 (319)
230 2j0j_A Focal adhesion kinase 1 100.0 4E-37 1.4E-41 352.1 15.4 246 380-651 395-652 (656)
231 4exu_A Mitogen-activated prote 100.0 8E-37 2.7E-41 327.0 16.8 252 380-649 47-331 (371)
232 3coi_A Mitogen-activated prote 100.0 1.4E-36 4.9E-41 322.8 17.9 255 380-649 29-313 (353)
233 3eb0_A Putative uncharacterize 100.0 1E-36 3.6E-41 327.6 16.8 258 380-650 12-330 (383)
234 3cek_A Dual specificity protei 100.0 6E-36 2.1E-40 312.4 21.6 241 380-645 33-294 (313)
235 2b9h_A MAP kinase FUS3, mitoge 100.0 3.7E-36 1.3E-40 319.4 18.9 251 380-644 16-306 (353)
236 2wei_A Calmodulin-domain prote 100.0 3.7E-36 1.3E-40 310.0 17.9 241 380-644 27-277 (287)
237 2wtk_C Serine/threonine-protei 100.0 2.4E-36 8.1E-41 314.0 16.4 239 380-644 10-264 (305)
238 2i6l_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 321.9 9.9 248 380-644 16-306 (320)
239 1zy4_A Serine/threonine-protei 100.0 6.5E-36 2.2E-40 309.8 19.1 241 380-644 11-284 (303)
240 3aln_A Dual specificity mitoge 100.0 3.7E-36 1.3E-40 316.0 17.0 248 380-643 27-285 (327)
241 3p23_A Serine/threonine-protei 100.0 3.6E-36 1.2E-40 327.9 17.0 239 380-643 29-283 (432)
242 3a99_A Proto-oncogene serine/t 100.0 2.4E-36 8.2E-41 316.6 13.7 233 380-644 48-294 (320)
243 2dyl_A Dual specificity mitoge 100.0 3.2E-36 1.1E-40 314.8 13.3 241 380-643 30-283 (318)
244 2iwi_A Serine/threonine-protei 100.0 4.9E-36 1.7E-40 312.9 14.1 233 380-644 36-284 (312)
245 3uqc_A Probable conserved tran 100.0 9.4E-35 3.2E-39 299.4 21.2 228 380-653 36-268 (286)
246 3m2w_A MAP kinase-activated pr 100.0 1.5E-34 5.1E-39 299.9 20.0 226 381-644 24-257 (299)
247 2pzi_A Probable serine/threoni 100.0 4.3E-35 1.5E-39 338.1 17.3 233 380-649 85-327 (681)
248 3qa8_A MGC80376 protein; kinas 100.0 3.2E-35 1.1E-39 331.1 11.6 262 380-652 19-311 (676)
249 3dzo_A Rhoptry kinase domain; 100.0 1.8E-34 6.3E-39 313.0 12.5 236 380-643 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.5E-33 8.4E-38 295.7 17.3 238 378-642 23-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 4.8E-29 1.6E-33 280.1 4.1 181 382-574 241-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 3.5E-27 1.2E-31 246.0 12.4 188 62-252 2-202 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.1E-25 3.9E-30 251.3 8.1 177 380-576 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 1E-24 3.6E-29 255.0 11.5 189 60-252 6-228 (768)
255 4eco_A Uncharacterized protein 99.9 1.2E-24 4E-29 248.9 7.3 184 65-253 29-336 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 1.5E-24 5.1E-29 253.3 7.1 185 63-253 266-579 (876)
257 4fcg_A Uncharacterized protein 99.9 2.3E-22 7.8E-27 211.0 8.0 186 61-253 22-235 (328)
258 3rgz_A Protein brassinosteroid 99.9 2.5E-22 8.6E-27 234.8 8.8 161 107-268 515-751 (768)
259 1zar_A RIO2 kinase; serine kin 99.9 7.6E-22 2.6E-26 202.1 10.6 150 381-560 96-274 (282)
260 3m19_A Variable lymphocyte rec 99.8 4.3E-20 1.5E-24 185.9 15.1 151 107-258 36-193 (251)
261 1ogq_A PGIP-2, polygalacturona 99.8 2.4E-20 8.2E-25 194.2 7.6 142 108-250 103-271 (313)
262 3e6j_A Variable lymphocyte rec 99.8 3.1E-19 1.1E-23 177.0 14.0 146 86-249 12-161 (229)
263 2o6s_A Variable lymphocyte rec 99.8 1.5E-18 5E-23 169.4 14.2 146 94-240 7-165 (208)
264 2v70_A SLIT-2, SLIT homolog 2 99.8 6.3E-19 2.2E-23 173.7 10.9 146 110-259 15-168 (220)
265 2o6q_A Variable lymphocyte rec 99.8 2.6E-18 8.9E-23 174.8 14.2 146 107-253 38-187 (270)
266 2v9t_B SLIT homolog 2 protein 99.8 2.8E-18 9.5E-23 169.0 12.0 145 111-259 16-167 (220)
267 2v9t_B SLIT homolog 2 protein 99.8 6.7E-18 2.3E-22 166.3 14.5 143 94-237 11-166 (220)
268 2v70_A SLIT-2, SLIT homolog 2 99.8 4.8E-18 1.7E-22 167.3 13.1 147 94-240 11-170 (220)
269 1zth_A RIO1 serine protein kin 99.7 2.9E-18 9.8E-23 173.3 11.2 132 380-529 52-219 (258)
270 3rfs_A Internalin B, repeat mo 99.7 1.2E-17 4.1E-22 170.1 15.6 151 106-259 63-220 (272)
271 2o6q_A Variable lymphocyte rec 99.7 2.1E-17 7.2E-22 168.1 15.8 154 106-260 61-221 (270)
272 4fcg_A Uncharacterized protein 99.7 3.5E-18 1.2E-22 179.0 9.9 144 106-253 104-259 (328)
273 3e6j_A Variable lymphocyte rec 99.7 2.4E-17 8.2E-22 163.4 14.8 133 106-240 40-176 (229)
274 2xot_A Amphoterin-induced prot 99.7 3.2E-18 1.1E-22 181.9 7.9 167 94-261 18-206 (361)
275 1ozn_A Reticulon 4 receptor; N 99.7 1.9E-17 6.5E-22 169.7 12.1 144 107-251 57-205 (285)
276 1p9a_G Platelet glycoprotein I 99.7 7.1E-17 2.4E-21 166.0 14.0 142 107-252 32-177 (290)
277 1w8a_A SLIT protein; signaling 99.7 8.7E-18 3E-22 161.8 6.2 127 110-240 12-143 (192)
278 2z66_A Variable lymphocyte rec 99.7 2.4E-17 8.1E-22 170.8 9.2 156 94-251 7-179 (306)
279 1ozn_A Reticulon 4 receptor; N 99.7 7.3E-17 2.5E-21 165.4 12.6 147 106-253 32-183 (285)
280 4g8a_A TOLL-like receptor 4; l 99.7 1.3E-17 4.3E-22 190.3 7.4 153 97-250 34-200 (635)
281 3m19_A Variable lymphocyte rec 99.7 2E-16 6.8E-21 159.0 14.9 154 93-253 4-161 (251)
282 1w8a_A SLIT protein; signaling 99.7 8.4E-17 2.9E-21 154.9 11.5 126 94-219 8-144 (192)
283 2o6s_A Variable lymphocyte rec 99.7 3.6E-16 1.2E-20 152.3 16.2 153 98-259 4-163 (208)
284 2z81_A CD282 antigen, TOLL-lik 99.7 1.5E-17 5E-22 186.8 7.1 156 95-252 5-177 (549)
285 2z66_A Variable lymphocyte rec 99.7 6.1E-17 2.1E-21 167.7 9.7 140 107-246 102-246 (306)
286 3rfs_A Internalin B, repeat mo 99.7 2.4E-16 8.2E-21 160.4 13.7 134 106-240 85-222 (272)
287 2z62_A TOLL-like receptor 4, v 99.7 2.2E-16 7.6E-21 161.0 13.4 153 107-260 77-240 (276)
288 2z80_A TOLL-like receptor 2, v 99.7 3.2E-17 1.1E-21 173.5 7.1 165 86-253 23-204 (353)
289 3v47_A TOLL-like receptor 5B a 99.7 7.3E-17 2.5E-21 176.7 10.3 151 95-246 9-177 (455)
290 3oja_B Anopheles plasmodium-re 99.7 7.2E-17 2.5E-21 183.1 10.0 170 84-254 10-202 (597)
291 2id5_A Lingo-1, leucine rich r 99.7 1.4E-16 4.8E-21 175.7 11.8 158 95-253 12-182 (477)
292 1p9a_G Platelet glycoprotein I 99.7 1.9E-16 6.6E-21 162.7 12.0 149 106-259 55-210 (290)
293 2o6r_A Variable lymphocyte rec 99.7 2.9E-16 9.9E-21 148.9 12.1 131 94-240 7-141 (177)
294 3zyi_A Leucine-rich repeat-con 99.7 2.1E-16 7.2E-21 173.1 12.3 156 95-252 55-247 (452)
295 3o6n_A APL1; leucine-rich repe 99.7 8.6E-17 3E-21 172.6 8.9 169 85-254 5-196 (390)
296 3j0a_A TOLL-like receptor 5; m 99.7 1.8E-16 6.1E-21 187.1 12.1 86 177-262 480-565 (844)
297 3v47_A TOLL-like receptor 5B a 99.7 1.3E-16 4.3E-21 174.8 9.7 130 131-260 275-411 (455)
298 4eco_A Uncharacterized protein 99.7 4E-17 1.4E-21 186.5 5.9 132 117-252 194-358 (636)
299 2z62_A TOLL-like receptor 4, v 99.7 1.6E-16 5.5E-21 162.0 9.2 143 107-250 29-176 (276)
300 3vq2_A TLR4, TOLL-like recepto 99.6 1.5E-16 5E-21 180.9 9.7 152 97-249 14-179 (606)
301 2ell_A Acidic leucine-rich nuc 99.6 1.7E-16 5.9E-21 149.1 8.4 133 106-242 24-165 (168)
302 3zyi_A Leucine-rich repeat-con 99.6 4.3E-16 1.5E-20 170.6 12.9 155 107-262 100-308 (452)
303 4b8c_D Glucose-repressible alc 99.6 5.9E-17 2E-21 187.3 6.1 178 63-246 129-339 (727)
304 1xku_A Decorin; proteoglycan, 99.6 5.6E-16 1.9E-20 162.3 12.9 145 94-241 31-188 (330)
305 3vq2_A TLR4, TOLL-like recepto 99.6 1.4E-16 4.8E-21 181.1 8.9 143 107-251 377-525 (606)
306 3t6q_A CD180 antigen; protein- 99.6 2.1E-16 7.3E-21 179.6 9.9 154 96-250 14-180 (606)
307 2ft3_A Biglycan; proteoglycan, 99.6 7.7E-16 2.6E-20 161.4 12.4 157 94-254 33-203 (332)
308 3zyj_A Leucine-rich repeat-con 99.6 8.7E-16 3E-20 167.6 12.7 155 106-262 112-297 (440)
309 2xwt_C Thyrotropin receptor; s 99.6 2.3E-16 7.9E-21 157.3 7.0 142 106-251 31-183 (239)
310 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.6E-20 146.5 11.9 123 110-237 14-140 (193)
311 3oja_A Leucine-rich immune mol 99.6 1.3E-16 4.6E-21 176.1 5.3 135 107-248 100-238 (487)
312 1wwl_A Monocyte differentiatio 99.6 1.5E-16 5.1E-21 165.4 5.2 144 107-251 96-257 (312)
313 4ecn_A Leucine-rich repeat pro 99.6 2E-16 6.8E-21 184.8 6.0 144 106-253 448-625 (876)
314 3j0a_A TOLL-like receptor 5; m 99.6 6.4E-16 2.2E-20 182.4 10.3 149 95-246 15-171 (844)
315 3cvr_A Invasion plasmid antige 99.6 8.2E-16 2.8E-20 171.8 10.3 150 85-254 35-190 (571)
316 4ezg_A Putative uncharacterize 99.6 9.5E-16 3.2E-20 148.1 9.4 139 107-252 45-186 (197)
317 3t6q_A CD180 antigen; protein- 99.6 4.7E-16 1.6E-20 176.8 8.2 143 106-249 376-526 (606)
318 2je0_A Acidic leucine-rich nuc 99.6 3.4E-16 1.2E-20 143.9 5.8 122 107-231 18-148 (149)
319 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.5E-15 5E-20 171.1 12.1 151 105-260 352-513 (562)
320 4glp_A Monocyte differentiatio 99.6 4.5E-16 1.5E-20 161.6 6.7 148 106-255 117-283 (310)
321 3oja_A Leucine-rich immune mol 99.6 7E-16 2.4E-20 170.4 7.9 97 155-252 120-219 (487)
322 4gyi_A RIO2 kinase; protein ki 99.6 2.2E-15 7.7E-20 158.4 11.1 130 380-528 100-264 (397)
323 4g8a_A TOLL-like receptor 4; l 99.6 1.6E-15 5.3E-20 172.9 10.5 155 107-261 421-584 (635)
324 1xku_A Decorin; proteoglycan, 99.6 2.2E-15 7.5E-20 157.7 10.7 144 107-253 122-269 (330)
325 1ziw_A TOLL-like receptor 3; i 99.6 1.5E-15 5.1E-20 175.1 10.0 149 95-244 5-166 (680)
326 2ell_A Acidic leucine-rich nuc 99.6 2.2E-15 7.6E-20 141.4 9.3 124 128-253 21-153 (168)
327 2z7x_B TOLL-like receptor 1, v 99.6 1.7E-15 5.9E-20 168.8 9.9 149 106-259 324-483 (520)
328 2je0_A Acidic leucine-rich nuc 99.6 8E-16 2.7E-20 141.4 5.9 123 129-253 15-146 (149)
329 3oja_B Anopheles plasmodium-re 99.6 2.6E-15 9E-20 170.3 11.4 108 107-215 76-185 (597)
330 2id5_A Lingo-1, leucine rich r 99.6 1.8E-15 6.1E-20 166.8 9.6 147 106-253 56-206 (477)
331 1wwl_A Monocyte differentiatio 99.6 4.7E-16 1.6E-20 161.6 4.6 146 106-254 121-284 (312)
332 2ft3_A Biglycan; proteoglycan, 99.6 2.8E-15 9.6E-20 157.1 10.6 143 107-253 124-270 (332)
333 2z63_A TOLL-like receptor 4, v 99.6 2.5E-15 8.7E-20 169.2 10.2 151 107-259 374-533 (570)
334 3zyj_A Leucine-rich repeat-con 99.6 4.8E-15 1.7E-19 161.6 11.9 141 95-236 44-198 (440)
335 2xot_A Amphoterin-induced prot 99.6 8.4E-15 2.9E-19 155.4 13.3 148 97-253 14-169 (361)
336 1ziw_A TOLL-like receptor 3; i 99.6 5.4E-15 1.8E-19 170.4 12.2 151 110-261 458-626 (680)
337 1xeu_A Internalin C; cellular 99.6 6.4E-15 2.2E-19 149.1 11.1 137 106-252 41-177 (263)
338 2z81_A CD282 antigen, TOLL-lik 99.6 4E-15 1.4E-19 166.9 10.1 148 106-260 361-513 (549)
339 2wfh_A SLIT homolog 2 protein 99.6 6.7E-15 2.3E-19 141.6 10.2 120 94-215 10-140 (193)
340 4glp_A Monocyte differentiatio 99.6 1.5E-15 5.1E-20 157.6 5.9 146 107-253 92-257 (310)
341 2xwt_C Thyrotropin receptor; s 99.6 3E-15 1E-19 149.1 7.7 144 106-253 55-211 (239)
342 4ezg_A Putative uncharacterize 99.5 4.7E-15 1.6E-19 143.2 7.8 128 106-237 66-195 (197)
343 3o6n_A APL1; leucine-rich repe 99.5 1.3E-14 4.4E-19 155.6 11.5 107 107-215 70-179 (390)
344 2z63_A TOLL-like receptor 4, v 99.5 1.2E-14 4.1E-19 163.7 10.3 136 106-241 396-536 (570)
345 3o53_A Protein LRIM1, AGAP0063 99.5 1.6E-15 5.4E-20 158.0 2.6 136 108-250 101-240 (317)
346 3o53_A Protein LRIM1, AGAP0063 99.5 3.4E-15 1.2E-19 155.5 4.8 143 106-252 58-219 (317)
347 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 2E-14 6.9E-19 161.8 11.4 139 106-247 52-195 (562)
348 4ay9_X Follicle-stimulating ho 99.5 2.3E-14 8E-19 151.3 11.1 95 94-189 9-116 (350)
349 2z7x_B TOLL-like receptor 1, v 99.5 8.7E-15 3E-19 163.1 7.4 139 106-247 21-164 (520)
350 1ds9_A Outer arm dynein; leuci 99.5 8E-17 2.7E-21 155.8 -8.0 142 107-253 19-180 (198)
351 1h6t_A Internalin B; cell adhe 99.5 3.4E-14 1.2E-18 145.9 11.2 136 106-252 68-205 (291)
352 4b8c_D Glucose-repressible alc 99.5 1.3E-15 4.4E-20 176.1 0.2 137 105-246 223-364 (727)
353 1dce_A Protein (RAB geranylger 99.5 2.2E-14 7.5E-19 160.9 9.8 117 108-230 443-567 (567)
354 2z80_A TOLL-like receptor 2, v 99.5 3.7E-14 1.3E-18 149.9 10.9 149 97-253 26-180 (353)
355 1h6t_A Internalin B; cell adhe 99.5 5.1E-14 1.7E-18 144.6 10.6 136 106-253 46-184 (291)
356 1h6u_A Internalin H; cell adhe 99.5 5E-14 1.7E-18 146.0 10.1 136 106-252 63-200 (308)
357 1h6u_A Internalin H; cell adhe 99.5 7E-14 2.4E-18 144.9 10.7 136 107-251 86-221 (308)
358 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 130.1 10.9 104 110-217 13-118 (170)
359 3cvr_A Invasion plasmid antige 99.5 1E-13 3.6E-18 154.7 12.5 117 107-241 81-197 (571)
360 2o6r_A Variable lymphocyte rec 99.5 7.2E-14 2.4E-18 132.3 9.5 112 106-218 28-141 (177)
361 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.3E-18 129.8 11.0 104 133-239 11-118 (170)
362 1m9s_A Internalin B; cell inva 99.5 9.3E-14 3.2E-18 156.7 11.3 137 106-253 65-203 (605)
363 1a9n_A U2A', U2A'; complex (nu 99.5 5.2E-14 1.8E-18 133.2 7.0 124 107-236 20-153 (176)
364 2r9u_A Variable lymphocyte rec 99.5 2.1E-13 7.1E-18 128.8 10.9 104 109-216 15-120 (174)
365 2r9u_A Variable lymphocyte rec 99.5 2.3E-13 7.8E-18 128.5 11.0 101 134-237 15-119 (174)
366 1jl5_A Outer protein YOPM; leu 99.5 1.4E-14 4.8E-19 158.4 2.7 134 106-251 11-157 (454)
367 1o6v_A Internalin A; bacterial 99.4 2.1E-13 7.1E-18 149.8 10.6 138 106-252 221-358 (466)
368 1dce_A Protein (RAB geranylger 99.4 1.1E-13 3.8E-18 155.1 7.8 104 132-240 442-550 (567)
369 1a9n_A U2A', U2A'; complex (nu 99.4 1.2E-13 4.1E-18 130.7 6.8 122 126-253 14-146 (176)
370 1m9s_A Internalin B; cell inva 99.4 1.9E-13 6.5E-18 154.2 9.6 136 106-253 43-181 (605)
371 1jl5_A Outer protein YOPM; leu 99.4 8.1E-13 2.8E-17 144.4 13.3 132 107-253 112-243 (454)
372 3bz5_A Internalin-J, INLJ; leu 99.4 3.8E-13 1.3E-17 147.1 10.5 123 107-240 149-281 (457)
373 3g06_A SSPH2 (leucine-rich rep 99.4 2.2E-13 7.5E-18 154.0 7.9 152 85-254 14-171 (622)
374 4fmz_A Internalin; leucine ric 99.4 5.1E-13 1.7E-17 140.6 9.7 139 106-252 177-316 (347)
375 1o6v_A Internalin A; bacterial 99.4 8.8E-13 3E-17 144.8 11.0 137 106-251 199-335 (466)
376 2ifg_A High affinity nerve gro 99.4 6.2E-13 2.1E-17 140.1 9.3 106 94-214 8-116 (347)
377 1xeu_A Internalin C; cellular 99.4 9.3E-13 3.2E-17 133.1 10.0 123 106-238 63-187 (263)
378 3bz5_A Internalin-J, INLJ; leu 99.4 2.7E-12 9.1E-17 140.4 13.5 133 106-252 106-238 (457)
379 2ast_B S-phase kinase-associat 99.4 1.8E-14 6E-19 151.1 -4.6 147 106-253 93-253 (336)
380 4fmz_A Internalin; leucine ric 99.3 8.3E-13 2.8E-17 138.9 7.9 137 106-253 199-339 (347)
381 2ast_B S-phase kinase-associat 99.3 3.6E-14 1.2E-18 148.6 -4.8 145 106-252 70-227 (336)
382 3g06_A SSPH2 (leucine-rich rep 99.3 5.9E-12 2E-16 142.3 12.6 132 107-252 122-289 (622)
383 2ca6_A RAN GTPase-activating p 99.3 6.9E-14 2.4E-18 149.7 -4.1 148 106-253 60-250 (386)
384 2ifg_A High affinity nerve gro 99.3 4.2E-12 1.4E-16 133.6 9.1 102 134-237 11-117 (347)
385 3tm0_A Aminoglycoside 3'-phosp 99.3 2.7E-11 9.2E-16 122.1 13.4 136 381-527 20-212 (263)
386 2ca6_A RAN GTPase-activating p 99.2 3.5E-13 1.2E-17 144.2 -2.8 148 106-253 32-222 (386)
387 3goz_A Leucine-rich repeat-con 99.2 4.3E-13 1.5E-17 142.2 -2.3 133 108-240 24-184 (362)
388 3goz_A Leucine-rich repeat-con 99.2 1.2E-12 4E-17 138.8 0.6 129 111-240 3-155 (362)
389 1ds9_A Outer arm dynein; leuci 99.2 7.8E-14 2.7E-18 134.7 -7.9 123 127-253 14-146 (198)
390 4ay9_X Follicle-stimulating ho 99.1 8.2E-11 2.8E-15 124.0 10.0 140 99-247 7-153 (350)
391 1nd4_A Aminoglycoside 3'-phosp 99.1 4E-10 1.4E-14 113.0 12.5 131 382-527 26-213 (264)
392 1z7x_W Ribonuclease inhibitor; 99.1 1.5E-12 5.2E-17 142.4 -7.2 147 106-252 227-403 (461)
393 1z7x_W Ribonuclease inhibitor; 99.0 1.7E-12 5.8E-17 142.0 -9.0 136 106-242 199-360 (461)
394 3rw6_A Nuclear RNA export fact 99.0 9E-13 3.1E-17 132.1 -10.5 158 95-255 79-259 (267)
395 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6.3E-14 114.0 12.1 140 381-528 44-248 (359)
396 3sg8_A APH(2'')-ID; antibiotic 98.8 1.7E-09 5.7E-14 111.5 5.7 182 381-576 26-288 (304)
397 3un9_A NLR family member X1; l 98.8 7.3E-11 2.5E-15 125.2 -5.9 133 106-238 101-254 (372)
398 3sb4_A Hypothetical leucine ri 98.8 7.9E-09 2.7E-13 107.7 8.6 141 107-252 102-302 (329)
399 3sb4_A Hypothetical leucine ri 98.7 6.5E-09 2.2E-13 108.3 5.7 131 121-253 83-280 (329)
400 3un9_A NLR family member X1; l 98.7 5.1E-11 1.7E-15 126.4 -11.2 145 107-252 73-244 (372)
401 3ogk_B Coronatine-insensitive 98.5 1.7E-09 5.9E-14 122.0 -5.8 109 128-236 375-501 (592)
402 4gkh_A Aminoglycoside 3'-phosp 98.5 8.7E-07 3E-11 89.2 12.8 135 382-527 31-222 (272)
403 1io0_A Tropomodulin; LRR prote 98.5 4.9E-09 1.7E-13 99.6 -4.2 111 126-236 31-164 (185)
404 3r70_A Aminoglycoside phosphot 98.4 7.2E-07 2.5E-11 92.4 11.5 132 381-528 43-237 (320)
405 3rw6_A Nuclear RNA export fact 98.4 1.3E-07 4.4E-12 94.6 4.5 75 153-229 168-257 (267)
406 3ogk_B Coronatine-insensitive 98.4 1.1E-08 3.7E-13 115.4 -4.3 141 107-250 139-296 (592)
407 3tdw_A Gentamicin resistance p 98.3 4.8E-06 1.6E-10 85.6 13.5 136 381-528 25-224 (306)
408 3ats_A Putative uncharacterize 98.3 1.7E-06 5.9E-11 90.8 10.1 80 381-460 26-122 (357)
409 3d1u_A Putative fructosamine-3 98.3 5.7E-06 1.9E-10 84.1 12.8 74 381-458 21-97 (288)
410 3ovc_A Hygromycin-B 4-O-kinase 98.2 8E-06 2.7E-10 86.0 12.4 74 381-459 47-122 (362)
411 2p1m_B Transport inhibitor res 98.2 4E-08 1.4E-12 110.8 -5.9 61 108-169 107-170 (594)
412 2p1m_B Transport inhibitor res 98.2 2.3E-08 8E-13 112.7 -8.1 107 129-237 370-495 (594)
413 1io0_A Tropomodulin; LRR prote 98.1 1.5E-07 5E-12 89.3 -3.0 108 106-214 36-164 (185)
414 2ra8_A Uncharacterized protein 98.1 1.1E-06 3.6E-11 92.5 2.2 126 107-236 173-320 (362)
415 4fdw_A Leucine rich hypothetic 98.0 1.6E-05 5.6E-10 84.8 10.2 135 108-250 137-274 (401)
416 4fdw_A Leucine rich hypothetic 98.0 9.4E-06 3.2E-10 86.6 8.4 123 107-236 158-284 (401)
417 2olc_A MTR kinase, methylthior 97.9 7.7E-05 2.6E-09 79.4 13.1 74 381-456 36-120 (397)
418 2q83_A YTAA protein; 2635576, 97.9 5.1E-05 1.8E-09 78.7 11.0 142 382-527 39-251 (346)
419 3jr1_A Putative fructosamine-3 97.9 8.1E-05 2.8E-09 76.3 12.1 140 381-524 42-232 (312)
420 2ra8_A Uncharacterized protein 97.7 4.4E-06 1.5E-10 87.7 -0.2 127 106-234 193-341 (362)
421 3f7w_A Putative fructosamine-3 97.6 0.0004 1.4E-08 70.3 13.3 73 381-457 21-96 (288)
422 2pyw_A Uncharacterized protein 97.5 0.00046 1.6E-08 74.0 12.6 73 498-571 232-312 (420)
423 3rfe_A Platelet glycoprotein I 97.5 0.0001 3.4E-09 65.2 5.7 57 158-214 11-68 (130)
424 3dxq_A Choline/ethanolamine ki 97.5 0.00071 2.4E-08 68.9 12.1 71 381-458 24-95 (301)
425 1zyl_A Hypothetical protein YI 97.4 0.0012 4.1E-08 68.0 13.5 144 382-528 33-223 (328)
426 3feg_A Choline/ethanolamine ki 97.3 0.0011 3.7E-08 69.8 11.1 142 382-527 57-253 (379)
427 2qg7_A Ethanolamine kinase PV0 97.2 0.0016 5.5E-08 70.4 12.2 74 381-458 114-188 (458)
428 3e4g_A ATP synthase subunit S, 97.2 8.6E-05 2.9E-09 68.9 1.6 81 131-211 61-149 (176)
429 1nw1_A Choline kinase (49.2 KD 97.2 0.00081 2.8E-08 72.2 9.3 73 381-458 79-159 (429)
430 2ppq_A HSK, HK, homoserine kin 97.2 0.0026 9E-08 65.2 12.8 145 381-527 28-216 (322)
431 3csv_A Aminoglycoside phosphot 97.2 0.0013 4.3E-08 68.0 10.0 143 382-528 25-217 (333)
432 3c5i_A Choline kinase; choline 97.0 0.0017 5.7E-08 68.2 9.7 74 381-458 39-121 (369)
433 1pgv_A TMD-1, tropomodulin TMD 96.9 9.2E-05 3.1E-09 70.0 -1.6 85 127-211 37-136 (197)
434 3i1a_A Spectinomycin phosphotr 96.6 0.0077 2.6E-07 62.3 10.7 69 384-458 32-108 (339)
435 3e4g_A ATP synthase subunit S, 96.5 0.00095 3.3E-08 61.8 2.2 80 155-234 61-150 (176)
436 3mes_A Choline kinase; malaria 96.3 0.0061 2.1E-07 65.0 7.7 73 382-458 77-157 (424)
437 1pgv_A TMD-1, tropomodulin TMD 96.3 0.00034 1.2E-08 66.0 -2.0 109 105-214 40-170 (197)
438 2yle_A Protein spire homolog 1 96.2 0.039 1.3E-06 52.4 11.8 102 457-574 34-135 (229)
439 3rfe_A Platelet glycoprotein I 96.2 0.0065 2.2E-07 53.3 6.2 56 110-168 12-68 (130)
440 4fs7_A Uncharacterized protein 96.1 0.012 4.2E-07 62.1 8.9 134 107-250 231-369 (394)
441 3f2s_A CK, chetk-alpha, cholin 96.1 0.024 8.2E-07 59.8 10.7 143 381-527 58-279 (401)
442 4gt6_A Cell surface protein; l 96.1 0.0078 2.7E-07 63.6 7.0 109 122-235 256-369 (394)
443 4h09_A Hypothetical leucine ri 95.8 0.019 6.3E-07 60.2 8.5 123 126-252 212-338 (379)
444 4gt6_A Cell surface protein; l 95.7 0.013 4.4E-07 61.9 6.9 114 132-252 243-362 (394)
445 4fs7_A Uncharacterized protein 95.5 0.03 1E-06 59.1 8.5 43 122-165 62-104 (394)
446 4h09_A Hypothetical leucine ri 95.1 0.07 2.4E-06 55.8 9.8 82 126-210 235-319 (379)
447 3g15_A CK, chetk-alpha, cholin 92.5 0.51 1.7E-05 49.7 10.5 29 500-528 246-280 (401)
448 2ks1_B Epidermal growth factor 89.5 0.1 3.5E-06 35.6 1.0 31 295-325 11-41 (44)
449 2l2t_A Receptor tyrosine-prote 89.3 0.085 2.9E-06 35.9 0.4 32 295-326 10-41 (44)
450 2k1k_A Ephrin type-A receptor 89.1 0.065 2.2E-06 35.5 -0.2 31 291-321 7-37 (38)
451 2jwa_A Receptor tyrosine-prote 84.2 0.22 7.5E-06 33.9 0.2 29 296-325 13-41 (44)
452 4ann_A ESSB; membrane protein, 73.7 5.2 0.00018 37.7 6.1 116 429-576 43-158 (215)
453 4ano_A ESSB; membrane protein, 73.4 7.3 0.00025 36.8 7.1 114 429-576 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 61.0 0.86 3E-05 48.9 -2.4 57 381-441 148-214 (463)
455 3ls8_A Phosphatidylinositol 3- 47.6 80 0.0027 34.6 10.3 85 435-527 403-501 (614)
456 2klu_A T-cell surface glycopro 35.5 19 0.00063 26.6 1.9 17 300-316 12-29 (70)
457 1iij_A ERBB-2 receptor protein 30.7 4.4 0.00015 26.0 -1.7 14 309-322 21-34 (35)
458 2lz0_A Uncharacterized protein 30.4 73 0.0025 25.6 5.1 44 121-165 10-53 (100)
459 2x6h_A GH13170P, VPS34, phosph 30.1 1.2E+02 0.0043 33.7 8.5 45 476-527 529-575 (696)
460 2l34_A TYRO protein tyrosine k 25.6 11 0.00037 23.9 -0.6 24 294-317 6-29 (33)
461 2llm_A Amyloid beta A4 protein 23.4 25 0.00087 23.5 0.0 24 293-316 15-38 (43)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.4e-52 Score=435.09 Aligned_cols=252 Identities=25% Similarity=0.410 Sum_probs=202.2
Q ss_pred hccccccCcEEEEEEEEC------CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|++. +++.||||+++.... ..++|.+|++++.++ +|||||+++|+|.+++..++||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEc
Confidence 468999999999999865 367899999976532 346799999999999 999999999999999999999999
Q ss_pred cCCCchhhhhccCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEee
Q 005875 453 FASGSLSTLLHGNRGA----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 522 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 522 (672)
|++|+|.++++..... ...+++|.+++.++.|||.||+|||+.+ ||||||||+||||++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcc
Confidence 9999999999764321 2346999999999999999999999988 99999999999999999999999
Q ss_pred cCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhh
Q 005875 523 FGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 595 (672)
Q Consensus 523 fGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 595 (672)
||+|+..... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ ....+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH------HHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH------HHHHHHc
Confidence 9999865332 23457899999999999999999999999999999999 899998654222 1222211
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 596 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 596 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
. .... ........+.+|+.+||+.||++||||+||+++|+.+.+..
T Consensus 276 g-~~~~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 276 G-RELE----------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp T-CCCC----------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred C-CCCC----------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 1 1111 11123345778888999999999999999999999998764
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.1e-51 Score=427.97 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=203.6
Q ss_pred hccccccCcEEEEEEEEC------CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+.++.++ +|||||+++|+|.+++..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEE
Confidence 467999999999999963 467899999976533 356899999999999 99999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEE
Q 005875 452 YFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 520 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl 520 (672)
||++|+|.++|+..... ....++|.+++.++.|||.||+|||+++ ||||||||+||||++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEE
Confidence 99999999999754311 1235899999999999999999999998 999999999999999999999
Q ss_pred eecCCCCCCCC------CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHh
Q 005875 521 SDFGLTPLMNV------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSV 593 (672)
Q Consensus 521 ~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 593 (672)
+|||+|+.... .....||+.|||||++.+..|+.++|||||||++|||+| |..||.+....+ ....+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~------~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------VVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH------HHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH------HHHHH
Confidence 99999976532 223457889999999999999999999999999999999 899998654322 11111
Q ss_pred hhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 005875 594 VREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 649 (672)
Q Consensus 594 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 649 (672)
....... ...++...+.+++.+||+.||++||||+||+++|+.+.
T Consensus 261 -~~~~~~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 -RNRQVLP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp -HTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -HcCCCCC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1211111 11223456778888999999999999999999998653
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.8e-52 Score=432.10 Aligned_cols=253 Identities=24% Similarity=0.440 Sum_probs=204.8
Q ss_pred hccccccCcEEEEEEEEC------CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|++. +++.||||+++.... ..++|.+|++++.++ +|||||+++|+|.+++..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence 578999999999999864 367899999976532 356799999999999 999999999999999999999999
Q ss_pred cCCCchhhhhccCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecC
Q 005875 453 FASGSLSTLLHGNR--------GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 524 (672)
Q Consensus 453 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfG 524 (672)
|++|+|.++++... ......++|.+++.++.|||.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcc
Confidence 99999999997542 122346999999999999999999999988 9999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhc
Q 005875 525 LTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 597 (672)
Q Consensus 525 la~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 597 (672)
+|+..... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ ....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------VIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHHcCC
Confidence 99754322 12347889999999999999999999999999999999 899998654322 122221111
Q ss_pred cccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 598 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 598 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
... ........+.+++.+||+.||++|||++||.+.|+++.+..+
T Consensus 248 -~~~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 248 -VLQ----------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp -CCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred -CCC----------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 111 111233457788889999999999999999999999986543
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-51 Score=419.86 Aligned_cols=250 Identities=28% Similarity=0.447 Sum_probs=198.2
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|++++ .||||+++..... .+.|.+|+++++++ +|||||+++|++. ++..++|||||++|
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 5789999999999999763 5999998754433 35789999999999 9999999999885 45789999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 531 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 531 (672)
+|.++++..+ ..+++.+++.|+.|||.||+|||+++ ||||||||+||||++++.+||+|||+|+....
T Consensus 117 sL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999997533 34999999999999999999999988 99999999999999999999999999986542
Q ss_pred -CCCCCCCCcccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 532 -PATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
.....||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+....+ ............ +..
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~------~~~~~~~~~~~~----p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGYAS----PDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHTTCCC----CCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH------HHHHHHhcCCCC----CCc
Confidence 123468999999999964 458999999999999999999999997643221 122222222111 111
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
. .....+...+.+++.+||+.||++||||+||++.|+.++..-
T Consensus 260 ~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 260 S--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp T--TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred c--cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 0 011123346777888999999999999999999999887543
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.2e-51 Score=424.30 Aligned_cols=261 Identities=22% Similarity=0.305 Sum_probs=196.4
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCC----eeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD----EKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|++. |+.||||+++........++.|+..+.++ +|||||++++++.+++ ..|+||||+++
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 468999999999999985 88999999975432222233444444566 8999999999998764 57999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-----GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~-----~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
|+|.++++.. .++|..+.+++.|++.||+|||+++ .++|+||||||+|||++.++.+||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999743 3899999999999999999999861 2459999999999999999999999999997653
Q ss_pred CC--------CCCCCCCcccCcccccCC------CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCC--------ChhH
Q 005875 531 VP--------ATPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--------DLPR 588 (672)
Q Consensus 531 ~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~--------~~~~ 588 (672)
.. ....||+.|||||++.+. .++.++|||||||++|||+||..||......+.. ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 32 124589999999999764 3678999999999999999999887644322110 0111
Q ss_pred HHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 589 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 589 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
.......+. ..++.+.......+....+.+++.+||+.||++||||.||++.|+++.+..
T Consensus 240 ~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 EMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 111111111 111221111122355677889999999999999999999999999998653
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.3e-50 Score=419.68 Aligned_cols=240 Identities=20% Similarity=0.341 Sum_probs=199.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+++++.+ +|||||+++++|.+++..|+|||||++|+
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 357999999999999976 58899999997543 3456789999999999 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----C
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~ 533 (672)
|.+++... .+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+..... .
T Consensus 158 L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 158 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 99999742 3999999999999999999999998 999999999999999999999999999865432 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+ ....+. +..... . ...
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~-~~~~~~-----~---~~~ 293 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIR-DNLPPR-----L---KNL 293 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHH-HSSCCC-----C---SCG
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHH-cCCCCC-----C---Ccc
Confidence 5679999999999999999999999999999999999999998643221 112221 111100 0 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+|+.+||+.||++|||++|++++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223456677889999999999999999874
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-49 Score=415.31 Aligned_cols=245 Identities=21% Similarity=0.243 Sum_probs=200.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.++||+|+||+||+|++. +++.||||+++.... ..+|++++..+ +|||||++++++.+++..|+||||+++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999975 478999999975432 34689999998 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC-CeEEeecCCCCCCCCC-----
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVP----- 532 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~-~~kl~DfGla~~~~~~----- 532 (672)
.++++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+|+.....
T Consensus 138 ~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 138 GQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999743 24999999999999999999999998 99999999999999998 6999999999765421
Q ss_pred ----CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 533 ----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 533 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
....||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+.. ..+.........
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~------~~i~~~~~~~~~------ 277 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC------LKIASEPPPIRE------ 277 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH------HHHHHSCCGGGG------
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH------HHHHcCCCCchh------
Confidence 2246899999999999999999999999999999999999999876544321 112211111000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
... .....+.+++.+||+.||++|||++|++++|....+..
T Consensus 278 ~~~---~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 278 IPP---SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp SCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred cCc---cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 011 12345667778999999999999999999998887654
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.2e-50 Score=422.16 Aligned_cols=255 Identities=27% Similarity=0.374 Sum_probs=206.2
Q ss_pred hccccccCcEEEEEEEECC------CcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeC-CeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lV~ 450 (672)
.+.||+|+||+||+|++.. ++.||||+++.... ..+.|.+|++++.++.+|||||+++|+|.++ +..++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 5789999999999998643 35799999976533 2457899999999996679999999999764 5689999
Q ss_pred EecCCCchhhhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeE
Q 005875 451 DYFASGSLSTLLHGNRG-----------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC 519 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~k 519 (672)
|||++|+|.++|+..+. .....+++.+++.++.|||.||+|||+++ ||||||||+|||+++++.+|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCEE
Confidence 99999999999975432 11345899999999999999999999998 99999999999999999999
Q ss_pred EeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 005875 520 ISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQS 592 (672)
Q Consensus 520 l~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~ 592 (672)
|+|||+|+...... ...+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ .+..
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------~~~~ 299 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 299 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHH
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH------HHHH
Confidence 99999998764332 2246888999999999999999999999999999998 999998654322 2222
Q ss_pred hhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 593 VVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 593 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.+.+...... .+.....+.+++.+||+.||++|||++||+++|+.+.+...
T Consensus 300 ~i~~g~~~~~----------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 300 RLKEGTRMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp HHHHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHcCCCCCC----------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 2222221111 11223456788889999999999999999999999987654
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-49 Score=404.49 Aligned_cols=241 Identities=24% Similarity=0.389 Sum_probs=192.3
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEe----CCeeEEEEEe
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDY 452 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~ 452 (672)
+.||+|+||+||+|.+. ++..||+|++...... .+.|.+|+++++++ +|||||+++++|.+ ++..|+||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 56999999999999976 4788999999765433 35688999999999 99999999999875 3457999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC-CCCeEEeecCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNV 531 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-~~~~kl~DfGla~~~~~ 531 (672)
|++|+|.++++.. ..+++..+..++.||+.||+|||+++ ++|+||||||+|||++. ++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999743 34899999999999999999999985 56999999999999984 79999999999986543
Q ss_pred C--CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 532 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 532 ~--~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
. .+..||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.... ......+ ........++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-----~~~~~~i-~~~~~~~~~~----- 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIYRRV-TSGVKPASFD----- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHHHHH-TTTCCCGGGG-----
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-----HHHHHHH-HcCCCCCCCC-----
Confidence 3 24569999999999875 6999999999999999999999999753221 1111111 1111111111
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 253 -~~---~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 -KV---AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GC---CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -cc---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 11246678889999999999999999873
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-49 Score=413.24 Aligned_cols=241 Identities=19% Similarity=0.374 Sum_probs=194.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.. +++.||||++...... .+.+.+|+++++++ +|||||++++++.+++..|+||||+++
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999975 5889999999765433 35688999999999 999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
|+|.+++...+ ...+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+|+.....
T Consensus 108 g~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999997543 234789999999999999999999998 999999999999999999999999999876532
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 533 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
.+..||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+. ......+....... . ..
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~~~~~~~-~-------~~ 247 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNLVLKIISGSFPP-V-------SL 247 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCCCC-C-------CT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHcCCCCC-C-------Cc
Confidence 234589999999999999999999999999999999999999986432 22233333322210 0 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. ....+.+|+.+||+.||++|||++|++++
T Consensus 248 ~---~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 248 H---YSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 22356677889999999999999999873
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.8e-49 Score=419.74 Aligned_cols=240 Identities=20% Similarity=0.339 Sum_probs=198.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+++++.+ +|||||+++++|.+++..|+|||||++|+
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 367999999999999975 588999999975533 456789999999999 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----C
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~ 533 (672)
|.++++.. .+++.++..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+..... .
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 99999742 3899999999999999999999998 999999999999999999999999999765432 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+ ....+. ..... .......+
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~-~~~~~-----~~~~~~~~ 373 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIR-DNLPP-----RLKNLHKV 373 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHH-HSCCC-----CCSCTTSS
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHH-cCCCC-----CCcccccC
Confidence 4568999999999999999999999999999999999999997643221 122211 11110 11111122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
...+.+|+.+||+.||++|||++|++++
T Consensus 374 ---s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 374 ---SPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp ---CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2356677789999999999999999884
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.4e-49 Score=403.91 Aligned_cols=237 Identities=18% Similarity=0.320 Sum_probs=197.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++.+.. ...+.+.+|+++++++ +|||||++++++++++..|+||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 578999999999999975 57899999997542 2346789999999999 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 116 gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999743 24999999999999999999999998 99999999999999999999999999986532
Q ss_pred ---CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 532 ---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 532 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
..+.+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+.. .....+...... +
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~~~---~----- 253 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLEYD---F----- 253 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCC---C-----
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCC---C-----
Confidence 23457999999999999999999999999999999999999999864322 222233222211 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
...+ ...+.+++.+||+.||++|||++|++.
T Consensus 254 -p~~~---s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 254 -PEKF---FPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -CTTC---CHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -Cccc---CHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 1112 234567788999999999999999754
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.4e-48 Score=391.06 Aligned_cols=237 Identities=23% Similarity=0.360 Sum_probs=184.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++.+... ..+.+.+|+++++++ +|||||++++++.+++..|+||||+
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 468999999999999964 588999999975432 245689999999999 9999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 67999998743 34999999999999999999999998 999999999999999999999999999876432
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
.+..||+.|||||++.+..| +.++||||+||++|||+||+.||.+.+. ......+...... + .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~~~~~i~~~~~~---~------p 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKNISNGVYT---L------P 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC---C------C
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCC---C------C
Confidence 34579999999999998886 5799999999999999999999975432 2222222222111 0 1
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
..+ ...+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~---s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 KFL---SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTS---CHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCC---CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 112 2345677889999999999999999884
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.9e-48 Score=398.91 Aligned_cols=237 Identities=26% Similarity=0.393 Sum_probs=188.8
Q ss_pred hccccccCcEEEEEEEEC----CCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|+.. .++.||+|++++... ....+.+|++++.++ +|||||++++++.+++..|+||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence 478999999999999863 367899999975432 234688899999998 999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV- 531 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~- 531 (672)
++||+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999743 24999999999999999999999998 99999999999999999999999999976432
Q ss_pred ---CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 532 ---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 532 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
..+..||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+..+ ....+......
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~~~--------- 244 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE------TMTMILKAKLG--------- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCC---------
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH------HHHHHHcCCCC---------
Confidence 234579999999999999999999999999999999999999998654222 22222222110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 643 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 643 (672)
....+ ...+.+++.+||+.||++|||+ +|+++
T Consensus 245 ~p~~~---s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQFL---SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCTTS---CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCcC---CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 01112 2345677789999999999984 56665
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.7e-46 Score=388.07 Aligned_cols=240 Identities=21% Similarity=0.362 Sum_probs=182.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCC------------
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------------ 444 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------------ 444 (672)
.+.||+|+||+||+|+.. +++.||||+++.... ..+.+.+|+++++++ +|||||++++++.+.+
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCc
Confidence 468999999999999975 578999999865432 245688999999999 9999999999997654
Q ss_pred eeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecC
Q 005875 445 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 524 (672)
Q Consensus 445 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfG 524 (672)
..|+||||+++|+|.+++..... ....++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCc
Confidence 36899999999999999975431 233567788999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCC----------------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhH
Q 005875 525 LTPLMNVP----------------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR 588 (672)
Q Consensus 525 la~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~ 588 (672)
+|+..... .+..||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 99875432 12358999999999999999999999999999999996 775321 0001
Q ss_pred HHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 589 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 589 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......... +.+ ..........+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~-----~p~------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TLTDVRNLK-----FPP------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHTTC-----CCH------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHhcCC-----CCC------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111000 000 112233445678889999999999999999873
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.8e-44 Score=381.43 Aligned_cols=187 Identities=23% Similarity=0.459 Sum_probs=163.6
Q ss_pred hccccccCcEEEEEEEEC----CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.+ .++.||+|++.... ....+.+|++++..+.+|||||++++++.+++..|+||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 468999999999999853 35789999986543 3556889999999987899999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC-CCeEEeecCCCCCCCCC--
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-~~~kl~DfGla~~~~~~-- 532 (672)
|+|.++++ .+++.++..++.|++.||+|||++| |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 2899999999999999999999998 9999999999999877 79999999999644221
Q ss_pred ------------------------------CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCC
Q 005875 533 ------------------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSP 578 (672)
Q Consensus 533 ------------------------------~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~ 578 (672)
.+..||+.|||||++.+. .|+.++||||+||++|||++|+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 124589999999999775 4899999999999999999999999654
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=381.03 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=191.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeC------CeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lV 449 (672)
.+.||+|+||+||+|+.. +++.||||+++..... .+.+.+|+++++.+ +|||||++++++... +..|+|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEE
Confidence 468999999999999975 5889999999765433 34577899999999 999999999997643 578999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
||||+ |+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+..
T Consensus 138 mE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99996 6899999743 35999999999999999999999998 999999999999999999999999999765
Q ss_pred CC--------CCCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccc-
Q 005875 530 NV--------PATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT- 599 (672)
Q Consensus 530 ~~--------~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 599 (672)
.. ..+..||+.|||||++.+. .++.++||||+||++|||++|++||.+.+..+. ...+......
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~------l~~I~~~~g~p 282 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ------LQLIMMVLGTP 282 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH------HHHHHHHHCCC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH------HHHHHHhcCCC
Confidence 32 2345789999999998875 468999999999999999999999987543221 1111110000
Q ss_pred -cccc--------h---hhhhc--ccChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 600 -AEVF--------D---VELMR--FQNIE----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 600 -~~~~--------d---~~~~~--~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
...+ . ..+.. ..... .....+.+|+.+||+.||++|||++|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 0 00000 00000 112356778889999999999999999984
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.2e-42 Score=362.69 Aligned_cols=267 Identities=27% Similarity=0.520 Sum_probs=223.5
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|++.+++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+++..++||||+++|+|
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 367999999999999988899999999876533 346788999999888 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-----
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 533 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~----- 533 (672)
.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 123 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 123 KRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999975432 2345899999999999999999999998 9999999999999999999999999987543221
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 534 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 534 -~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
...+++.|+|||++.+..++.++||||||+++|||++|+.||......+......|..............++.... ..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT-CS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc-cc
Confidence 2236788999999998899999999999999999999999999877777777777765544444444444443322 22
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
..+....+.+++.+||+.||++|||++|++++|+.+.+..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 3567788999999999999999999999999999987653
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.2e-43 Score=389.81 Aligned_cols=242 Identities=18% Similarity=0.270 Sum_probs=191.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc----ChhhHHHHHHHHHHHc--CCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.++||+|+||+||+|+.. +++.||+|++.+... ......+|..++..+. +|||||+++++|.+++..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 468999999999999976 478999999975422 2233445544444332 799999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV- 531 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~- 531 (672)
++||+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+....
T Consensus 274 ~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 274 MNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp CCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999743 24999999999999999999999998 99999999999999999999999999987643
Q ss_pred -CCCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 532 -PATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
..+.+||+.|||||++.. ..|+.++||||+||++|||++|++||.+....+. ......+..... ..
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~~---------~~ 413 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMAV---------EL 413 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCCC---------CC
T ss_pred CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCCC---------CC
Confidence 345679999999999964 5799999999999999999999999976443321 111111111111 01
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 644 (672)
...++ ..+.+|+.+||+.||++|++ ++||+++
T Consensus 414 p~~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 414 PDSFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CTTSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CccCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 11122 34567777999999999998 7888763
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.2e-43 Score=392.06 Aligned_cols=243 Identities=20% Similarity=0.392 Sum_probs=198.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|+++++.+ +|||||+++++|.+++..|+|||||++|+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 468999999999999975 578999999876532 356788999999999 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC--CCeEEeecCCCCCCCCCC--
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD--LDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~--~~~kl~DfGla~~~~~~~-- 533 (672)
|.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+......
T Consensus 241 L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 999996432 34899999999999999999999998 9999999999999854 899999999998765433
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 534 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 534 -~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ ....+....+.. .. .....
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~~~~i~~~~~~~---~~--~~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDWNM---DD--SAFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCC---CS--GGGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHhCCCCC---Cc--ccccC
Confidence 3468999999999999999999999999999999999999998654322 122222221110 00 01112
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
++ ..+.+|+.+||+.||++|||++|++++
T Consensus 383 ~s---~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 IS---EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22 345677789999999999999999874
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.7e-42 Score=363.73 Aligned_cols=256 Identities=24% Similarity=0.348 Sum_probs=201.8
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCC----eeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD----EKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|++. ++.||||++.........++.|+.++.++ +||||+++++++.+.. ..++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 468999999999999987 78999999976544445566788888888 8999999999998754 36999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCcccCCCCCCCEEecCCCCeEEeecCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM----------GGPKFTHGNIKASNVLINQDLDGCISDFGL 525 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~----------~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 525 (672)
|+|.++++.. .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999742 389999999999999999999998 7 99999999999999999999999999
Q ss_pred CCCCCCC------CCCCCCCcccCcccccCC-----CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHH-----
Q 005875 526 TPLMNVP------ATPSRSAGYRAPEVIETR-----KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRW----- 589 (672)
Q Consensus 526 a~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~----- 589 (672)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.+............
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9654322 224578999999999863 456788999999999999999999987655443322111
Q ss_pred -----HHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 590 -----VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 590 -----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
......... .+..............+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 258 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKKK-----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSCC-----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccC-----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111111 111111111123456688999999999999999999999999999865
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.9e-42 Score=360.65 Aligned_cols=278 Identities=38% Similarity=0.682 Sum_probs=223.2
Q ss_pred CCCHHHHHHHH-----hccccccCcEEEEEEEECCCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEE
Q 005875 369 NFDLEDLLRAS-----AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYY 441 (672)
Q Consensus 369 ~~~~~~l~~~~-----~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 441 (672)
.|+..++.... .+.||+|+||+||+|+..+++.||||++..... ....+.+|++++..+ +||||+++++++.
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~ 97 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 97 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEEC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEe
Confidence 34555554433 468999999999999988899999999976532 334688999999888 8999999999999
Q ss_pred eCCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEe
Q 005875 442 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS 521 (672)
Q Consensus 442 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~ 521 (672)
+++..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+...++|+||||||+|||++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999986543 34459999999999999999999999922239999999999999999999999
Q ss_pred ecCCCCCCCCC-----CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC--CCCCCChhHHHHHhh
Q 005875 522 DFGLTPLMNVP-----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT--RDDMVDLPRWVQSVV 594 (672)
Q Consensus 522 DfGla~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~--~~~~~~~~~~~~~~~ 594 (672)
|||++...... ....+++.|+|||++.+..++.++||||||+++|||++|+.||.... .........|.....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999765432 22347899999999998889999999999999999999999996321 122334555665555
Q ss_pred hhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 005875 595 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 649 (672)
Q Consensus 595 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 649 (672)
.........+.... .....+....+.+++.+||+.||++|||++|++++|+...
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 257 KEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 55444444444332 2334677888999999999999999999999999998643
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-41 Score=353.95 Aligned_cols=253 Identities=28% Similarity=0.427 Sum_probs=196.4
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+.. ++.||||++...... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 468999999999999874 788999998765433 24688899999999 8999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 532 (672)
+|.+++..... ...+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 99999975321 123899999999999999999999985 45999999999999999999999999999765432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 533 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
....+++.|+|||++.+..++.++|||||||++|||++|+.||......+ ............. .
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~----------~ 260 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ------VVAAVGFKCKRLE----------I 260 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHHHSCCCCC----------C
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCCCC----------C
Confidence 23457899999999999999999999999999999999999997543221 1111110110000 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.......+.+++.+||+.||++|||++|+++.|+.+.+...
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 11122456778889999999999999999999999987643
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=350.09 Aligned_cols=251 Identities=25% Similarity=0.407 Sum_probs=203.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 478999999999999975 47889999886542 2346788999999999 89999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC----
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA---- 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~---- 533 (672)
|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 94 LRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999997532 34899999999999999999999998 9999999999999999999999999997653221
Q ss_pred --------------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 534 --------------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 534 --------------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
...||+.|+|||++.+..++.++||||||+++|||++|..||............ ..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~- 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL-NVRGFLDRYC- 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB-CHHHHHHHTC-
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh-hhhccccccC-
Confidence 345788999999999999999999999999999999999999764433221100 0000000000
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.......+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 245 -------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 245 -------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp -------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 01112346778889999999999999999999999986543
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.4e-41 Score=359.12 Aligned_cols=254 Identities=25% Similarity=0.413 Sum_probs=204.4
Q ss_pred hccccccCcEEEEEEEEC--------CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 449 (672)
.+.||+|+||+||+|+.. ++..||||+++.... ..+.+.+|++++.++.+||||+++++++.+++..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 578999999999999863 345699999976532 2356889999999987899999999999999999999
Q ss_pred EEecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCe
Q 005875 450 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 518 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 518 (672)
|||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCE
Confidence 9999999999999764321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005875 519 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 591 (672)
Q Consensus 519 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 591 (672)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+. ..
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~------~~ 316 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------FK 316 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------HH
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH------HH
Confidence 999999997554321 2234678999999999999999999999999999999 9999986543221 11
Q ss_pred HhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 592 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 592 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
......... ........+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 317 -~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 317 -LLKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp -HHHTTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -HHhcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111111111 011223457778889999999999999999999999987654
No 26
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-40 Score=340.71 Aligned_cols=247 Identities=25% Similarity=0.440 Sum_probs=206.9
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|+..+++.||+|++.......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 468999999999999998889999999988777778899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----CCC
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-----PAT 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~-----~~~ 534 (672)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..... ...
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9997533 34899999999999999999999998 99999999999999999999999999976543 223
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+... ... .. .
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~-~~~--~~--------~ 229 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTG-FRL--YK--------P 229 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTT-CCC--CC--------C
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcC-ccC--CC--------C
Confidence 445678999999998999999999999999999999 999997543221 11111111 000 00 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
......+.+++.+||+.||++|||++|++++|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11224567788899999999999999999999999865
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.1e-41 Score=347.28 Aligned_cols=240 Identities=23% Similarity=0.348 Sum_probs=196.9
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|.. .+++.||+|++.... ...+.+.+|+.++..+ +||||+++++++..++..++||||+++|+
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 36899999999999996 468899999987553 3456788999999998 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----C
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~ 533 (672)
|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 99999743 3899999999999999999999998 999999999999999999999999998765432 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
...+++.|+|||++.+..++.++|||||||++|||++|+.||...... ............ . ....
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~-~--------~~~~ 239 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTP-E--------LQNP 239 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCSC-C--------CSCG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC-C--------CCCc
Confidence 345789999999999999999999999999999999999999754321 111111111110 0 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1223456778889999999999999999874
No 28
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.2e-40 Score=340.74 Aligned_cols=248 Identities=22% Similarity=0.360 Sum_probs=204.2
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|.+.++..||+|+++......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 468999999999999999888999999988777788899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----CCC
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-----PAT 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~-----~~~ 534 (672)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..... ...
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9997532 23899999999999999999999998 99999999999999999999999999976533 223
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+... ... . ..
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~------~~~~~~~~-~~~--~--------~~ 243 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQG-LRL--Y--------RP 243 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTT-CCC--C--------CC
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH------HHHHHhcc-cCC--C--------CC
Confidence 345678999999998899999999999999999998 999997543211 11111111 000 0 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
......+.+++.+||+.+|++|||++|++++|+++.+.+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 111245677888999999999999999999999998664
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.6e-40 Score=338.96 Aligned_cols=248 Identities=26% Similarity=0.425 Sum_probs=205.0
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|+..++..||+|+++......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 468999999999999999888999999988777778899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-----C
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-----~ 534 (672)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9997532 24899999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .......... ...+
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~---~~~~-------- 227 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKVSQGHR---LYRP-------- 227 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTCC---CCCC--------
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHHHHHcCCC---CCCC--------
Confidence 335667999999998889999999999999999999 999997543211 1111111110 0000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
......+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 111235677888999999999999999999999987653
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=354.46 Aligned_cols=251 Identities=27% Similarity=0.450 Sum_probs=201.5
Q ss_pred hccccccCcEEEEEEEEC----CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|++. .+..||||+++.... ..+.+.+|++++.++ +||||+++++++.+++..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCC
Confidence 478999999999999974 345699999976432 245788999999999 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 533 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 533 (672)
++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999997654322
Q ss_pred -------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 534 -------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 534 -------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
...+++.|+|||++.+..++.++||||||+++|||++ |..||......+ ....+.. ....
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~-~~~~----- 273 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD------VISSVEE-GYRL----- 273 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH------HHHHHHT-TCCC-----
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHc-CCCC-----
Confidence 1224567999999998899999999999999999999 999997543221 1111111 1100
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 655 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 655 (672)
.........+.+++.+||+.||++|||++|+++.|+.+.+.....
T Consensus 274 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 274 -----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred -----CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 001122345778888999999999999999999999998776543
No 31
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.1e-39 Score=339.70 Aligned_cols=270 Identities=29% Similarity=0.529 Sum_probs=213.2
Q ss_pred CCCHHHHHHHHh-----------ccccccCcEEEEEEEECCCcEEEEEEeccccc-----ChhhHHHHHHHHHHHcCCCc
Q 005875 369 NFDLEDLLRASA-----------EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPN 432 (672)
Q Consensus 369 ~~~~~~l~~~~~-----------~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~n 432 (672)
.|+.+++...+. +.||+|+||+||+|.. +++.||+|++..... ..+.+.+|++++..+ +|||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ 91 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHEN 91 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTT
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCC
Confidence 466677766652 6799999999999997 478999999875421 245688999999999 9999
Q ss_pred eeceEEEEEeCCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe
Q 005875 433 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 512 (672)
Q Consensus 433 iv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl 512 (672)
|+++++++.+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999975332 345899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 005875 513 NQDLDGCISDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 586 (672)
Q Consensus 513 ~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~ 586 (672)
+.++.+||+|||++...... ....+++.|+|||++.+ .++.++||||||+++|||++|..||......+...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~- 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL- 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT-
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH-
Confidence 99999999999998765432 23457889999999875 58899999999999999999999998765443221
Q ss_pred hHHHHHhhhhcc-ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 005875 587 PRWVQSVVREEW-TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 650 (672)
Q Consensus 587 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 650 (672)
.+......... ....++... ..........+.+++.+||+.||++|||++|++++|+++.+
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 -DIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp -HHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred -HHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 22221111110 111111111 11234566788899999999999999999999999999865
No 32
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.2e-40 Score=345.70 Aligned_cols=251 Identities=23% Similarity=0.398 Sum_probs=193.7
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHH-cCCCceeceEEEEEeC----CeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+. +++.||||++... ....+..|.+++... .+||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 46899999999999998 5889999998653 245566777777663 2899999999997653 45789999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcccCCCCCCCEEecCCCCeEEeecCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 526 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--------~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 526 (672)
+|+|.++++. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 90 MGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999963 24899999999999999999999 766 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCcccccCC------CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 005875 527 PLMNVP--------ATPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 582 (672)
Q Consensus 527 ~~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~el~tg----------~~pf~~~~~~~ 582 (672)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||++| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 654322 223688999999999876 455789999999999999999 78876543322
Q ss_pred CCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 005875 583 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 648 (672)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 648 (672)
.. . ................. ...........+.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~~-~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PS-F-EDMRKVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CC-H-HHHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cc-h-hhhhHHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 11 1 11111111111111111 1111234567788999999999999999999999999976
No 33
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.7e-40 Score=345.70 Aligned_cols=253 Identities=15% Similarity=0.163 Sum_probs=204.0
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|+. .+++.||||++.... ..+.+.+|++++..+.+||||+++++++..++..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 46899999999999996 467889999987543 34578999999999989999999999999999999999999 9999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC-----eEEeecCCCCCCCCC-
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 532 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-----~kl~DfGla~~~~~~- 532 (672)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99997532 34999999999999999999999998 999999999999999887 999999999765332
Q ss_pred ----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccccc
Q 005875 533 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 602 (672)
Q Consensus 533 ----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (672)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.. .....+........
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~---~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK---ERYQKIGDTKRATP- 240 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH---HHHHHHHHHHHHSC-
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH---HHHHHHHhhhccCC-
Confidence 2345789999999999999999999999999999999999999876433321 11111111110000
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 603 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 603 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
... ..... ..+.+++.+||+.||++||+++++.+.|+++.+..
T Consensus 241 -~~~--~~~~~----p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 241 -IEV--LCENF----PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -HHH--HTTTC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HHH--HhccC----hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 000 00111 16778888999999999999999999999987654
No 34
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.6e-40 Score=344.43 Aligned_cols=239 Identities=21% Similarity=0.308 Sum_probs=196.1
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++|+|
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 47999999999999976 689999999875533 356788999999998 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----CC
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 534 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~~ 534 (672)
.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 130 ~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 999863 23899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChH
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 614 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 614 (672)
..+|+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+. ....... . ...
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~------~~~~~~~-~~~~~~~-----~---~~~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV------QAMKRLR-DSPPPKL-----K---NSH 265 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSSCCCC-----T---TGG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHh-cCCCCCc-----C---ccc
Confidence 46889999999999999999999999999999999999999754321 1111111 1111000 0 001
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 615 EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 615 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.....+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122356778889999999999999999885
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=356.53 Aligned_cols=260 Identities=25% Similarity=0.374 Sum_probs=207.0
Q ss_pred hccccccCcEEEEEEEEC--------CCcEEEEEEecccccC--hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 449 (672)
.+.||+|+||+||+|+.. ++..||+|+++..... .+.+.+|++++.++.+||||+++++++.+++..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 468999999999999863 2357999999765332 356889999999998899999999999999999999
Q ss_pred EEecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCe
Q 005875 450 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 518 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 518 (672)
|||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcE
Confidence 9999999999999764321 1235999999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005875 519 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 591 (672)
Q Consensus 519 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 591 (672)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+ ...
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~------~~~ 304 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFK 304 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHH
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHH
Confidence 999999998664322 2235678999999999999999999999999999999 999997543221 111
Q ss_pred HhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCC
Q 005875 592 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSS 659 (672)
Q Consensus 592 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~s~ 659 (672)
. +........ .......+.+++.+||+.||++|||++|+++.|+.+.......+...
T Consensus 305 ~-~~~~~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~ 361 (382)
T 3tt0_A 305 L-LKEGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGY 361 (382)
T ss_dssp H-HHTTCCCCC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC---
T ss_pred H-HHcCCCCCC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCC
Confidence 1 111111100 01123456778889999999999999999999999998776544433
No 36
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-39 Score=337.52 Aligned_cols=263 Identities=22% Similarity=0.314 Sum_probs=203.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC----hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++...... .+.+.+|+.++.++ +||||+++++++.+++..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 468999999999999965 5789999998654322 34678899999998 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 533 (672)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 95 GPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999743 24899999999999999999999998 9999999999999999999999999997654322
Q ss_pred ----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 534 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 534 ----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
...+++.|+|||++.+..++.++||||||+++|||++|+.||.+....+ ........... ......
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~----~~~~~~ 236 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS------IAIKHIQDSVP----NVTTDV 236 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH------HHHHHHSSCCC----CHHHHS
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhhccCC----Ccchhc
Confidence 2347899999999999999999999999999999999999997643211 11111111110 000000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhhcCCCCCCCCcccCC
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDSENRPSSEENKS 664 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~~~~~s~~~~~~ 664 (672)
.. .....+.+++.+||+.||++|| +++++.+.|+.+......++...+..+.
T Consensus 237 ~~---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 289 (294)
T 4eqm_A 237 RK---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYELDKM 289 (294)
T ss_dssp CT---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCCC----
T ss_pred cc---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcchhhhhcc
Confidence 11 1224567788899999999999 8999999999988776555544444433
No 37
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.4e-39 Score=337.16 Aligned_cols=255 Identities=17% Similarity=0.193 Sum_probs=204.2
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|+. .+++.||+|++.... ..+.+.+|++++..+.+|+|++++++++.++...++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 46899999999999996 568899999986543 34678899999999988999999999999999999999999 9999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC-----eEEeecCCCCCCCCC-
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 532 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-----~kl~DfGla~~~~~~- 532 (672)
.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99997532 24899999999999999999999998 999999999999988776 999999999765432
Q ss_pred ----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccccc
Q 005875 533 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 602 (672)
Q Consensus 533 ----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (672)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||.+......... ...+.........
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~ 242 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK---YERIGEKKQSTPL 242 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH---HHHHHHHHHHSCH
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHH---HHHHHhhccCccH
Confidence 233578899999999999999999999999999999999999987543322111 1111111100000
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 603 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 603 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
... .. .....+.+++.+||+.||++||+++++++.|+++.+...
T Consensus 243 --~~~--~~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 --REL--CA---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp --HHH--TT---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHH--Hh---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000 00 123457788889999999999999999999999987643
No 38
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8.3e-41 Score=367.61 Aligned_cols=248 Identities=24% Similarity=0.440 Sum_probs=205.1
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|.+.++..||||+++......+.+.+|++++.++ +||||+++++++. ++..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 468999999999999998889999999987766778899999999999 9999999999986 66789999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC-----CC
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-----~~ 534 (672)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997432 123889999999999999999999998 999999999999999999999999999865431 22
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..++..|+|||++....++.++|||||||++|||+| |+.||.+....+ ....+. ..... ...
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~-~~~~~----------~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE------VIRALE-RGYRM----------PRP 407 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHH-HTCCC----------CCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHH-cCCCC----------CCC
Confidence 335678999999998899999999999999999999 999997643221 111111 11110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
......+.+++.+||+.||++|||+++|++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 123346778888999999999999999999999887543
No 39
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.1e-40 Score=345.47 Aligned_cols=238 Identities=19% Similarity=0.316 Sum_probs=196.1
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||.||+|+. .+++.||||++...... .+.+.+|+++++.+ +||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 46899999999999997 56889999999765433 34577899999998 899999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 99 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 99 GEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999999643 24899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCCcccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 533 ATPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~-~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
....+|+.|+|||++.+..+. .++||||+||++|||++|+.||.+... ......+....... .
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~~---------p- 234 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------KELRERVLRGKYRI---------P- 234 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC---------C-
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC---------C-
Confidence 345689999999999888775 789999999999999999999976432 12222222211110 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 235 --~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 --FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1122346678889999999999999999885
No 40
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-40 Score=344.80 Aligned_cols=256 Identities=23% Similarity=0.372 Sum_probs=196.2
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHH-cCCCceeceEEEEEeC----CeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. ++.||||++.... ...+..|.+++... .+||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 578999999999999986 8899999986543 33445555555443 2899999999999887 67899999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCCCcccCCCCCCCEEecCCCCeEEeecCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM--------GGPKFTHGNIKASNVLINQDLDGCISDFGLT 526 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~--------~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 526 (672)
+|+|.++++.. .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCCEEEEeCCCc
Confidence 99999999743 389999999999999999999988 6 999999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCCcccCcccccCCCCCCc------cchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 005875 527 PLMNVPA--------TPSRSAGYRAPEVIETRKHSHK------SDVYSFGVLLLEMLTG----------KAPLQSPTRDD 582 (672)
Q Consensus 527 ~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~------~DvwS~Gvvl~el~tg----------~~pf~~~~~~~ 582 (672)
....... ...+|+.|+|||++.+..+..+ +|||||||++|||+|| ..||......+
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 6553321 3457899999999988776665 9999999999999999 55554432222
Q ss_pred CCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 583 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
. . .............. +.........+....+.+++.+||+.||++|||++|++++|+.+.+...
T Consensus 270 ~-~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 P-S-YEDMREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp C-C-HHHHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred C-c-hhhhHHHHhhhccC----ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 1 1 11111111111111 1111111123566778899999999999999999999999999987653
No 41
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=8.7e-40 Score=358.98 Aligned_cols=246 Identities=25% Similarity=0.408 Sum_probs=202.1
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCC-eeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|.+. ++.||||+++... ..+.+.+|++++.++ +||||+++++++.+.+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 578999999999999986 6799999997654 457899999999999 9999999999988765 78999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-CCCC
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 537 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~ 537 (672)
.++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...+
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence 99997532 234789999999999999999999998 9999999999999999999999999997554322 2345
Q ss_pred CCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHH
Q 005875 538 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 616 (672)
Q Consensus 538 ~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 616 (672)
++.|+|||++.+..++.++|||||||++|||++ |+.||......+. . .. +....... .....
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~---~~-i~~~~~~~----------~p~~~ 411 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---V---PR-VEKGYKMD----------APDGC 411 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---H---HH-HHTTCCCC----------CCTTC
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---H---HH-HHcCCCCC----------CCCcC
Confidence 778999999999999999999999999999998 9999986544331 1 11 11111111 11123
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 617 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 617 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
...+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 34677888899999999999999999999999765
No 42
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.1e-40 Score=342.06 Aligned_cols=253 Identities=26% Similarity=0.379 Sum_probs=193.7
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+..+++.||+|++...... ...+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 4689999999999999988999999999754332 35688999999999 999999999999999999999999985
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 532 (672)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 104 DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 8888886433 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccccc---chh---
Q 005875 533 ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV---FDV--- 605 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~--- 605 (672)
....+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ............... .+.
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL---PKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH---HHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHHCCCChHHhhhhhccchh
Confidence 23457889999999876 56899999999999999999999999876544321 111111111000000 000
Q ss_pred ---hhh--cccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 606 ---ELM--RFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 606 ---~~~--~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
... .... .......+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 0000 01122456788889999999999999999873
No 43
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.1e-41 Score=361.12 Aligned_cols=247 Identities=25% Similarity=0.382 Sum_probs=200.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|++. +++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+++..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 578999999999999986 688999999875432 235688899999998 9999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC---
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 533 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~--- 533 (672)
+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999997432 24899999999999999999999998 9999999999999999999999999987643321
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 534 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 534 ---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
...+++.|+|||++.+..++.++|||||||++|||++ |..||......+ ............
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~~-------- 335 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------TREFVEKGGRLP-------- 335 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-------HHHHHHTTCCCC--------
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCCC--------
Confidence 1123557999999998899999999999999999998 999997643221 111111111100
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
........+.+++.+||+.||++|||++|+++.|+++...
T Consensus 336 --~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 --CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0111234567888899999999999999999999999754
No 44
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.3e-40 Score=335.52 Aligned_cols=245 Identities=25% Similarity=0.393 Sum_probs=189.1
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEeccccc-----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|.+. ++.||||+++.... ..+.+.+|++++..+ +||||+++++++.+++..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCC
Confidence 468999999999999986 78899999875432 235788999999998 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC--------CCCeEEeecCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--------DLDGCISDFGLT 526 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~--------~~~~kl~DfGla 526 (672)
+++|.+++.. ..+++..+..++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999999963 24899999999999999999999987556899999999999986 778999999999
Q ss_pred CCCCCCC--CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 527 PLMNVPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 527 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
....... ...+++.|+|||++.+..++.++||||||+++|||++|+.||.+..... .............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~--- 234 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA------VAYGVAMNKLALP--- 234 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHHTSCCCCC---
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHhhhcCCCCCC---
Confidence 7654332 3457889999999999899999999999999999999999997543211 1111111111100
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 648 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 648 (672)
........+.+++.+||+.||++|||++|++++|+++
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 -------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0112234577888899999999999999999999864
No 45
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.4e-39 Score=346.53 Aligned_cols=241 Identities=21% Similarity=0.350 Sum_probs=196.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|+.. +++.||+|+++.... ..+.+.+|+.++..+ +||||+++++++.+.+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEE
Confidence 468999999999999976 578899999976532 235788999999999 89999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC----CeEEeecCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 527 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 527 (672)
|+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++.
T Consensus 96 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999642 34899999999999999999999998 99999999999998877 79999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 528 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 528 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
..... ....||+.|+|||++.+..++.++|||||||++|||++|..||.+....+ ....+...... ++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~---~~ 238 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITAVSYD---FD 238 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCC---CC
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCC---CC
Confidence 66443 34568999999999999999999999999999999999999997643221 11222111110 11
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
.. .... ....+.+++.+||..||++|||++|+++
T Consensus 239 ~~--~~~~---~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EE--FFSQ---TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HH--HHTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ch--hccC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 10 0111 1234667788999999999999999986
No 46
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.6e-40 Score=365.32 Aligned_cols=248 Identities=26% Similarity=0.406 Sum_probs=206.3
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|.+.+ +..||||+++......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 4689999999999999875 78899999987766778899999999999 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-----
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 533 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~----- 533 (672)
.++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99997533 234899999999999999999999998 9999999999999999999999999998654321
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
...++..|+|||++.+..++.++|||||||++|||++ |..||.+....+. . ..+....... .
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~---~----~~~~~~~~~~----------~ 440 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---Y----ELLEKDYRME----------R 440 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---H----HHHHTTCCCC----------C
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH---H----HHHHcCCCCC----------C
Confidence 2234668999999998899999999999999999999 9999986543221 1 1111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.......+.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 112234567788899999999999999999999988644
No 47
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=346.58 Aligned_cols=239 Identities=20% Similarity=0.311 Sum_probs=191.0
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+. .+++.||||++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 46899999999999996 4688999999876542 345788999999999 8999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 532 (672)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 94 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999643 24899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....||+.|+|||++.+..+ +.++||||+||++|||++|..||.+... ......+....... .
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~~---------p 230 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV------MALYKKIMRGKYDV---------P 230 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC---------C
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCCC---------C
Confidence 23457899999999988775 8899999999999999999999975431 12222222221110 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 645 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 645 (672)
. .....+.+++.+||+.||++|||++|++++-
T Consensus 231 ~---~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 231 K---WLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred C---CCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 1 1123456788899999999999999999853
No 48
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.4e-39 Score=348.05 Aligned_cols=245 Identities=19% Similarity=0.294 Sum_probs=194.5
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccC----hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.++||+|+||+||+|+..+ ++.||+|++++.... .+.+..|..++.++.+||||+++++++.+++..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 4689999999999999764 678999999765322 34578899999888789999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCC--ChhHHHHHhhhhccccccchhhhh
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--DLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .........+..... .
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------~ 280 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------R 280 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--------C
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--------C
Confidence 23456899999999999999999999999999999999999999754322211 111111111111100 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 643 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~ 643 (672)
... .....+.+++.+||+.||++||++ +|+++
T Consensus 281 ~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 281 IPR---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp CCT---TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CCC---cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 011 122356677889999999999995 66665
No 49
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-40 Score=344.78 Aligned_cols=243 Identities=21% Similarity=0.334 Sum_probs=198.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|... +++.+|+|.+.........+.+|++++..+ +||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 467999999999999976 467899999876554556788999999998 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC--CCCeEEeecCCCCCCCCCC---
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPA--- 533 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~--~~~~kl~DfGla~~~~~~~--- 533 (672)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 89 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 89 FERINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp HHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 99996432 34899999999999999999999998 999999999999997 7899999999998765432
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
...+++.|+|||++.+..++.++|||||||++|||++|..||.+.... .....+...... ++.. ...
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~---~~~~--~~~-- 228 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMNAEYT---FDEE--AFK-- 228 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCC---CCHH--HHT--
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHcCCCC---CChh--hhc--
Confidence 234788999999999988999999999999999999999999764322 112222221111 0000 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.....+.+++.+||+.||++|||+.|++++
T Consensus 229 -~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 -EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 122456778889999999999999999984
No 50
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-39 Score=331.32 Aligned_cols=247 Identities=25% Similarity=0.416 Sum_probs=206.0
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||.||+|...+++.||+|++.......+.+.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 468999999999999998888999999988776778899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----CCC
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-----PAT 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~-----~~~ 534 (672)
+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++..... ...
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9997543 34899999999999999999999998 99999999999999999999999999876532 223
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... .... . .
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~i~~~-~~~~--~-----~--- 227 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTG-FRLY--K-----P--- 227 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTT-CCCC--C-----C---
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH------HHHHHHhcC-CcCC--C-----C---
Confidence 445678999999998889999999999999999999 89999754321 111111111 1000 0 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
......+.+++.+||+.||++|||++|++++|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11224567788899999999999999999999999864
No 51
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=336.38 Aligned_cols=264 Identities=17% Similarity=0.253 Sum_probs=205.6
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCC--eeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+... ++.||||++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 4689999999999999764 7899999997543 2356788999999999 8999999999998765 7799999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe----cCCCCeEEeecCCCCCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl----~~~~~~kl~DfGla~~~~ 530 (672)
+|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp TCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999975432 233899999999999999999999998 9999999999999 788889999999997664
Q ss_pred CCC---CCCCCCcccCccccc--------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 531 VPA---TPSRSAGYRAPEVIE--------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 531 ~~~---~~~~~~~y~aPE~~~--------~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
... ...+++.|+|||++. +..++.++|||||||++|||++|+.||........ .......+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHCCT
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCCCc
Confidence 432 345788999999986 56789999999999999999999999975433221 11222222222111
Q ss_pred cc---c---------chhhhh-cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 600 AE---V---------FDVELM-RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 600 ~~---~---------~d~~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.. . +..... ...........+.+++.+||+.||++|||++|++++..+..-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 00 0 000111 1122345566788899999999999999999999999876543
No 52
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.2e-40 Score=351.59 Aligned_cols=254 Identities=27% Similarity=0.374 Sum_probs=202.0
Q ss_pred hccccccCcEEEEEEEEC------CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCe-eEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-KLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-~~lV~ 450 (672)
.+.||+|+||.||+|++. +++.||||+++.... ..+.+.+|++++.++.+||||+++++++.+.+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 568999999999999842 357899999976432 235688999999999889999999999987654 89999
Q ss_pred EecCCCchhhhhccCCCCC-------------------------------------------------------------
Q 005875 451 DYFASGSLSTLLHGNRGAG------------------------------------------------------------- 469 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~------------------------------------------------------------- 469 (672)
||+++|+|.++++......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999997643210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC------CCCCCCcccC
Q 005875 470 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA------TPSRSAGYRA 543 (672)
Q Consensus 470 ~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~a 543 (672)
...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+|+.|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122889999999999999999999998 9999999999999999999999999997653322 2335778999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHH
Q 005875 544 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ 622 (672)
Q Consensus 544 PE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 622 (672)
||++.+..++.++|||||||++|||+| |..||.+....+ .............. .......+.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~~----------~~~~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRA----------PDYTTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCC----------CTTCCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCCC----------CCCCCHHHHH
Confidence 999999999999999999999999998 999997654322 11111111111110 0112235677
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 623 IGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 623 l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
++.+||+.||++|||++|++++|+++.+..
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 888999999999999999999999998653
No 53
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.6e-40 Score=355.89 Aligned_cols=247 Identities=27% Similarity=0.503 Sum_probs=192.1
Q ss_pred hccccccCcEEEEEEEEC----CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|++. ++..||||+++.... ..+++.+|++++.++ +||||+++++++.+++..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCC
Confidence 478999999999999865 467799999975432 245788999999999 9999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 533 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 533 (672)
++|+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999997532 34899999999999999999999998 9999999999999999999999999997764322
Q ss_pred C-------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 534 T-------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 534 ~-------~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
. ..+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ .... +......
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~------~~~~-i~~~~~~----- 269 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKA-VDEGYRL----- 269 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH------HHHH-HHTTEEC-----
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HHcCCCC-----
Confidence 1 123567999999999999999999999999999998 999997543221 1111 1111110
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.........+.+++.+||+.||++||+++|+++.|+.+...
T Consensus 270 -----~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 270 -----PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 01112334677888899999999999999999999999764
No 54
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=7.9e-40 Score=343.56 Aligned_cols=241 Identities=22% Similarity=0.363 Sum_probs=192.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|+.++..+ +||||+++++++.+++..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 468999999999999976 678899999865432 246788999999998 9999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 531 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 531 (672)
+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999743 34899999999999999999999998 99999999999999999999999999975432
Q ss_pred -CCCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 532 -PATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
.....+++.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....+. ..... ..
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~----~~~~~---~~----- 229 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK----EKKTY---LN----- 229 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHH----TTCTT---ST-----
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHh----ccccc---CC-----
Confidence 124568899999999987775 7789999999999999999999976543211 011110 00000 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
........+.+++.+||+.||++|||++|++++
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 011122455678889999999999999999875
No 55
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.1e-40 Score=339.15 Aligned_cols=255 Identities=24% Similarity=0.400 Sum_probs=196.7
Q ss_pred hccccccCcEEEEEEEE-----CCCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeC--CeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~e 451 (672)
.+.||+|+||+||+|++ .+++.||||++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence 46899999999999984 2578899999875432 235788999999999 899999999998653 56899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999997543 24899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC--------CCCC-hhHHHHHhhh
Q 005875 532 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD--------DMVD-LPRWVQSVVR 595 (672)
Q Consensus 532 ~~-------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~--------~~~~-~~~~~~~~~~ 595 (672)
.. ...++..|+|||++.+..++.++||||||+++|||+||..|+...... .... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 22 223456699999999999999999999999999999999998643110 0000 0000011111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 596 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 596 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
... ...........+.+++.+||+.||++|||++|+++.|+++.+.-
T Consensus 247 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 247 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccC----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 110 01111223356778888999999999999999999999998653
No 56
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=341.54 Aligned_cols=242 Identities=23% Similarity=0.380 Sum_probs=196.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEE
Confidence 578999999999999976 478899999875432 246789999999999 89999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC----CeEEeecCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 527 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 527 (672)
|+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 95 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 95 LVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999642 34899999999999999999999998 99999999999999887 79999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 528 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 528 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
..... ....+|+.|+|||++.+..++.++|||||||++|||++|..||.+....+ ....+...... +.
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~~~~~~~~---~~ 237 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYE---FE 237 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHTCCC---CC
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHhcCCC---cC
Confidence 65432 23458899999999999999999999999999999999999997543211 11111111100 00
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. ... .....+.+++.+||+.||++|||++|++++
T Consensus 238 ~~--~~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 DE--YFS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HH--HHT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cc--ccc---cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 001 112456678889999999999999999973
No 57
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.2e-39 Score=342.62 Aligned_cols=247 Identities=21% Similarity=0.340 Sum_probs=179.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|... +++.||||++... ....+.+|+.++..+.+||||+++++++.++...++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 367999999999999976 5788999998653 3467788999999996699999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC---CeEEeecCCCCCCCCC---
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla~~~~~~--- 532 (672)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 94 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 94 FERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp HHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999753 34899999999999999999999998 99999999999998766 7999999999765432
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCC-ChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV-DLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ........+....... ... .
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~---~- 239 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF--EGE---A- 239 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC--CSH---H-
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC--Ccc---c-
Confidence 2345688999999999999999999999999999999999999865433221 1122222222111110 000 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.......+.+++.+||+.||++|||++|++++
T Consensus 240 --~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 240 --WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp --HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred --ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 01123456778889999999999999998764
No 58
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3e-39 Score=340.71 Aligned_cols=238 Identities=21% Similarity=0.278 Sum_probs=195.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++++.. .....+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 57899999997542 2345678899999988 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 89 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp TCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+...... ..
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~~~---------~p 225 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILMEEIR---------FP 225 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------CC
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------HHHHHHHcCCCC---------CC
Confidence 22345789999999999999999999999999999999999999754321 112222211110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 644 (672)
.. ....+.+++.+||+.||++|| +++|++++
T Consensus 226 ~~---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RT---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CC---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 11 123466777899999999999 89999875
No 59
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-40 Score=363.09 Aligned_cols=248 Identities=25% Similarity=0.430 Sum_probs=201.4
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|.+.++..||||+++......+.+.+|++++.++ +||||+++++++.+ +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 468999999999999999888899999987666678899999999999 99999999999865 6789999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-----C
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-----~ 534 (672)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 9997432 134899999999999999999999998 9999999999999999999999999998654321 2
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ....+ ....... ..
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i-~~~~~~~----------~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQV-ERGYRMP----------CP 403 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHH-HTTCCCC----------CC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHH-HcCCCCC----------CC
Confidence 234678999999998899999999999999999999 999997643221 11111 1111100 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
......+.+++.+||+.||++|||++++++.|+++....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 123345778888999999999999999999999987554
No 60
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.8e-39 Score=348.32 Aligned_cols=245 Identities=19% Similarity=0.296 Sum_probs=190.0
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe----CCeeEEEEEecCC
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFAS 455 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~~~ 455 (672)
+.||+|+||+||+|... +++.||||++.. ...+.+|++++.++.+||||+++++++.. .+..|+||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 57999999999999976 478899999864 35678889888777799999999999876 5678999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC---CCCeEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~~ 532 (672)
|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999997532 234899999999999999999999998 999999999999998 789999999999765432
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 533 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 533 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+....... ..+ .
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~--~~~---~ 290 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEF--PNP---E 290 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCC--CTT---T
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccC--CCc---c
Confidence 244578999999999999999999999999999999999999986554332110 111111111100 000 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 645 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 645 (672)
. ......+.+++.+||+.||++|||++|++++-
T Consensus 291 ~---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 291 W---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp T---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred c---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 1 11234567788899999999999999999853
No 61
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.3e-40 Score=344.95 Aligned_cols=246 Identities=22% Similarity=0.372 Sum_probs=194.3
Q ss_pred hccccccCcEEEEEEEECC-Cc----EEEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLEE-ST----TVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~----~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|++.. ++ .||+|.+.... ...+.+.+|++++.++ +||||+++++++.++ ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence 4689999999999999643 33 35888876443 2456789999999999 999999999999875 47899999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999998765432
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 533 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 533 ~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
. ...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+. ..........
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------~~~~~~~~~~----- 238 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-------SSILEKGERL----- 238 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-------HHHHHTTCCC-----
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH-------HHHHHcCCCC-----
Confidence 2 2234678999999999999999999999999999999 9999986543321 1111111100
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.........+.+++.+||+.||++||++.|++++|+.+...
T Consensus 239 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 -----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 01112234577888899999999999999999999998653
No 62
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.9e-39 Score=335.03 Aligned_cols=251 Identities=28% Similarity=0.450 Sum_probs=195.9
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+.. ..+++|+++..... .+.+.+|++++.++ +||||+++++++. .+..++||||+++|
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 478999999999999865 35888888754333 35688899999998 8999999999864 56689999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 531 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 531 (672)
+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 117 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred cHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999997432 34899999999999999999999998 99999999999999999999999999975432
Q ss_pred -CCCCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 532 -PATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
.....+++.|+|||++. +..++.++|||||||++|||++|+.||......+ ............. ..
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~----~~ 259 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGYASP----DL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTCCCC----CS
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH------HHHHHHhcCCCCc----ch
Confidence 12345789999999986 5668889999999999999999999997543221 1111111111110 00
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.. ........+.+++.+||+.+|++||++.|+++.|+.+....+
T Consensus 260 ~~--~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 260 SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TT--SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hh--hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 00 001223457778889999999999999999999999986643
No 63
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-39 Score=342.36 Aligned_cols=237 Identities=22% Similarity=0.327 Sum_probs=194.0
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|.. .+++.||+|++.... .....+.+|++++..+ +||||+++++++.+++..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 46899999999999997 467899999986542 2245788999999988 8999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 92 ~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 92 GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 68999888642 24899999999999999999999998 999999999999999999999999999766443
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....|++.|+|||++.+..+ +.++|||||||++|||++|+.||.+....+..... .... .
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i-----------~~~~----~--- 225 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-----------NSCV----Y--- 225 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC-----------CSSC----C---
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH-----------HcCC----C---
Confidence 34568999999999988776 68999999999999999999999865433321100 0000 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.........+.+++.+||+.||++|||++|++++
T Consensus 226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0001122346678889999999999999999984
No 64
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=354.42 Aligned_cols=252 Identities=23% Similarity=0.353 Sum_probs=200.6
Q ss_pred hccccccCcEEEEEEEEC------CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|++. +++.||||+++.... ....+.+|+.++.++ +||||+++++++.++...++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence 468999999999999953 356799999875432 234688899999999 99999999999999999999999
Q ss_pred ecCCCchhhhhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC---CeEEeecCCC
Q 005875 452 YFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 526 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla 526 (672)
|+++|+|.+++...+. .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999975432 12245899999999999999999999998 99999999999999555 5999999998
Q ss_pred CCCC------CCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 527 PLMN------VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 527 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
+... ......+++.|+|||++.+..++.++|||||||++|||++ |..||......+ ....+.... .
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~------~~~~i~~~~-~ 304 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------VLEFVTSGG-R 304 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHTTC-C
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCC-C
Confidence 6431 2222346788999999999999999999999999999998 999997643221 111111111 0
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
.. ........+.+++.+||+.||++|||++|++++|+.+.+..
T Consensus 305 ~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 MD----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CC----------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 00 01122345678888999999999999999999999997654
No 65
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=346.20 Aligned_cols=238 Identities=24% Similarity=0.328 Sum_probs=193.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++++.. ...+.+.+|.+++..+.+||||+++++++.+.+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 47889999997542 2345677888899888789999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 108 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 108 GGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ ....+...... ..
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~------~~~~i~~~~~~---------~p 244 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD------LFEAILNDEVV---------YP 244 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCC---------CC
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCC---------CC
Confidence 224468999999999999899999999999999999999999998653221 22222221110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 643 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~ 643 (672)
......+.+++.+||+.||++||++ +|+++
T Consensus 245 ---~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 ---TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122346677889999999999998 77776
No 66
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.7e-39 Score=345.33 Aligned_cols=255 Identities=17% Similarity=0.212 Sum_probs=192.7
Q ss_pred hccccccCcEEEEEEEECC------CcEEEEEEecccccChhhHHHHHHHHHHHc--------------CCCceeceEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVVGKRDFEQQMEIVGRVG--------------QHPNVVPLRAY 439 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~--------------~h~niv~l~~~ 439 (672)
.+.||+|+||+||+|.+.. ++.||||++.... ..+.+|++++.++. +|+||++++++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 4689999999999999765 3679999986542 23444444444332 59999999999
Q ss_pred EEeC----CeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec--
Q 005875 440 YYSK----DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-- 513 (672)
Q Consensus 440 ~~~~----~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-- 513 (672)
+... ...++||||+ +|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 9765 4579999999 999999997532 34999999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC
Q 005875 514 QDLDGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 582 (672)
Q Consensus 514 ~~~~~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~ 582 (672)
.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+.....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999654321 22338899999999999999999999999999999999999998543221
Q ss_pred CCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 583 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
............ ......+..+. .. .....+.+++..||+.+|++||+++++++.|+++.+..
T Consensus 269 --~~~~~~~~~~~~-~~~~~~~~~~~-~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 269 --KYVRDSKIRYRE-NIASLMDKCFP-AA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp --HHHHHHHHHHHH-CHHHHHHHHSC-TT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHhhh-hHHHHHHHhcc-cc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 111111111111 11111111110 01 12345677888999999999999999999999998654
No 67
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.9e-39 Score=338.52 Aligned_cols=255 Identities=25% Similarity=0.406 Sum_probs=205.1
Q ss_pred hccccccCcEEEEEEEE------CCCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|+. .+++.||+|+++.... ..+.+.+|++++.++.+||||+++++++.+++..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 47899999999999985 2457899999975432 246788999999999889999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCe
Q 005875 452 YFASGSLSTLLHGNRGA-------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 518 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 518 (672)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCE
Confidence 99999999999754321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCCC------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005875 519 CISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 591 (672)
Q Consensus 519 kl~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 591 (672)
||+|||++........ ..+++.|+|||++.+..++.++||||||+++|||+| |..||.+....+ ...
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHH
Confidence 9999999977654322 224667999999999899999999999999999999 999997654321 111
Q ss_pred HhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 592 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 592 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.......... ........+.+++.+||+.||++|||++|++++|+++.....
T Consensus 259 ~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 259 KMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHhccCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 1111111100 001123456778889999999999999999999999987643
No 68
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.9e-38 Score=326.83 Aligned_cols=254 Identities=17% Similarity=0.168 Sum_probs=198.3
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCcee-ceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVV-PLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv-~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|+. .+++.||+|++.... ..+.+.+|++++..+ +|++++ .+..+...++..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 46899999999999996 568899999986543 345789999999999 555544 4444446677889999999 899
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe---cCCCCeEEeecCCCCCCCCC--
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~-- 532 (672)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999997432 24899999999999999999999998 9999999999999 48899999999999765432
Q ss_pred ---------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 533 ---------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 533 ---------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
....+++.|+|||++.+..++.++|||||||++|||++|+.||......+.................
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----
Confidence 2345788999999999999999999999999999999999999876544333322211111000000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
... .. .....+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 240 -~~~--~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 240 -EVL--CK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -HHH--TT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -HHH--Hh---hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 000 01 112457778889999999999999999999999987654
No 69
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.7e-39 Score=343.75 Aligned_cols=244 Identities=20% Similarity=0.305 Sum_probs=190.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+++.. +++.||+|++.......+.+.+|+.+++.+ +||||+++++++.+.+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 468999999999999976 678899999987666667889999999998 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC--eEEeecCCCCCCCC---CC
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV---PA 533 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~--~kl~DfGla~~~~~---~~ 533 (672)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.... ..
T Consensus 104 ~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 9999642 24899999999999999999999998 999999999999988765 99999999874432 23
Q ss_pred CCCCCCcccCcccccCCCCCCc-cchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 534 TPSRSAGYRAPEVIETRKHSHK-SDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~-~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
...+|+.|+|||++.+..++.+ +|||||||++|||++|+.||.+..... ........+....... .....
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~ 246 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSI-------PDDIR 246 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCC-------CTTSC
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCC-------CCcCC
Confidence 4558899999999988887665 899999999999999999998654322 2222222222211110 00001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
....+.+++.+||+.||++|||++|++++
T Consensus 247 ---~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 247 ---ISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 12356678889999999999999999985
No 70
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.9e-39 Score=339.28 Aligned_cols=245 Identities=19% Similarity=0.292 Sum_probs=193.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC----hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|+++..... .+.+.+|..++.++.+||||+++++++.+++..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 4778999999765432 23467888888887789999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCC--ChhHHHHHhhhhccccccchhhhh
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--DLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .........+..... .
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------~ 237 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------R 237 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC--------C
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC--------C
Confidence 23456899999999999999999999999999999999999999754322111 111111111111100 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 643 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~ 643 (672)
.. ......+.+++.+||+.||++||++ +|+++
T Consensus 238 ~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 238 IP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp CC---TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred CC---CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 00 1122356677889999999999995 67765
No 71
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-39 Score=343.78 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=200.5
Q ss_pred hccccccCcEEEEEEEE------CCCcEEEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|+. .++..||+|++.... ...+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 57899999999999996 235579999997543 2346789999999999889999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec
Q 005875 452 YFASGSLSTLLHGNRGA------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN 513 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~ 513 (672)
|+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEc
Confidence 99999999999754321 0134799999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCCh
Q 005875 514 QDLDGCISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 586 (672)
Q Consensus 514 ~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~ 586 (672)
.++.+||+|||++....... ...+++.|+|||++.+..++.++||||||+++|||+| |..||.+....+
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 282 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA---- 282 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH----
Confidence 99999999999997654332 1234678999999998899999999999999999998 999997654321
Q ss_pred hHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 587 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 587 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
.............. .......+.+++.+||+.||++|||+.|++++|+.+.....+
T Consensus 283 --~~~~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 283 --NFYKLIQNGFKMDQ----------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp --HHHHHHHTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred --HHHHHHhcCCCCCC----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 11111211111100 011234567788899999999999999999999999876553
No 72
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.9e-39 Score=350.70 Aligned_cols=241 Identities=22% Similarity=0.307 Sum_probs=194.7
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+... ++.||+|++++.. ...+.+.+|+.++..+ +||||+++++++.+++..|+||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 4689999999999999764 7789999987532 2345688899999888 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.++++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999999742 3899999999999999999999998 999999999999999999999999999765432
Q ss_pred ---CCCCCCCcccCcccccCCC----CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 533 ---ATPSRSAGYRAPEVIETRK----HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 533 ---~~~~~~~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
.+..||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.... .....+........
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~---- 293 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKNSLT---- 293 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCC----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHhcccccc----
Confidence 2567899999999997665 789999999999999999999999864322 12222222110000
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 644 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 644 (672)
......+ ...+.+++.+|++.+|++ ||+++|++++
T Consensus 294 -~p~~~~~---s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 -FPDDNDI---SKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -CCTTCCC---CHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -CCCcccc---cHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0011112 234566777999999988 9999999985
No 73
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-39 Score=347.76 Aligned_cols=193 Identities=21% Similarity=0.337 Sum_probs=169.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHc----CCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----QHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||||+++......+.+..|++++..+. +||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 468999999999999974 5788999999765444567788999999884 4999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC--------------------
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-------------------- 514 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-------------------- 514 (672)
+++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 899999997543 234899999999999999999999998 999999999999975
Q ss_pred -----CCCeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 005875 515 -----DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 579 (672)
Q Consensus 515 -----~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~ 579 (672)
++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence 789999999999765443 34567899999999999999999999999999999999999998654
No 74
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.9e-39 Score=330.76 Aligned_cols=247 Identities=22% Similarity=0.448 Sum_probs=194.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC--------hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 450 (672)
.+.||+|+||+||+|+.. +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.. ++||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--EEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--eEEE
Confidence 468999999999999974 6788999998654321 15688999999999 8999999999986544 7999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC-----eEEeecCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGL 525 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-----~kl~DfGl 525 (672)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999999886432 34899999999999999999999985 45999999999999988876 99999999
Q ss_pred CCCCCCC-CCCCCCCcccCcccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccccc
Q 005875 526 TPLMNVP-ATPSRSAGYRAPEVI--ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 602 (672)
Q Consensus 526 a~~~~~~-~~~~~~~~y~aPE~~--~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (672)
++..... ....+++.|+|||++ ....++.++|||||||++|||++|+.||......+. ...............
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~ 251 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----KFINMIREEGLRPTI 251 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH----HHHHHHHHSCCCCCC
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH----HHHHHHhccCCCCCC
Confidence 9765443 235678999999999 445678999999999999999999999976543221 111111111111111
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 005875 603 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 648 (672)
Q Consensus 603 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 648 (672)
.......+.+++.+||+.||++|||++|+++.|+++
T Consensus 252 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 252 ----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 112234577888899999999999999999999864
No 75
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=342.92 Aligned_cols=252 Identities=23% Similarity=0.406 Sum_probs=201.2
Q ss_pred hccccccCcEEEEEEEECC------CcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||.||+|+..+ ++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEe
Confidence 4689999999999999753 47899999976432 245688999999999 99999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe
Q 005875 452 YFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 512 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl 512 (672)
|+++|+|.+++...... ....+++.++..++.||+.||+|||+.+ |+||||||+||++
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEE
Confidence 99999999999764321 1246899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCC------CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 005875 513 NQDLDGCISDFGLTPLMNV------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 585 (672)
Q Consensus 513 ~~~~~~kl~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~ 585 (672)
+.++.+||+|||++..... .....+++.|+|||++.+..++.++||||||+++|||++ |..||.+....+
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 284 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE--- 284 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH---
Confidence 9999999999999865422 223446788999999998899999999999999999999 999997543211
Q ss_pred hhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 586 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
....+..... ... .......+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 285 ---~~~~~~~~~~-~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 285 ---VIYYVRDGNI-LAC----------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp ---HHHHHHTTCC-CCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ---HHHHHhCCCc-CCC----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1111111111 000 0122345778888999999999999999999999998654
No 76
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=351.34 Aligned_cols=242 Identities=20% Similarity=0.312 Sum_probs=194.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|... +++.+|+|++..... ..+.+.+|++++..+ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 578999999999999864 578899999876543 235688999999999 999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec---CCCCeEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~---~~~~~kl~DfGla~~~~~~ 532 (672)
|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++......
T Consensus 95 g~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999998743 34899999999999999999999998 99999999999998 4688999999999766543
Q ss_pred C----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 533 A----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 533 ~----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
. ...||+.|+|||++.+..++.++||||+||++|||++|..||.+.... .....+....... .. .
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~--~~---~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------RLYQQIKAGAYDF--PS---P 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCC--CT---T
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhCCCCC--Cc---c
Confidence 2 346899999999999999999999999999999999999999764322 1122222111110 00 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.... ....+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~---~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDT---VTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccc---CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111 22356677889999999999999999983
No 77
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=336.68 Aligned_cols=239 Identities=21% Similarity=0.312 Sum_probs=187.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---------------------------ChhhHHHHHHHHHHHcCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------------------------GKRDFEQQMEIVGRVGQHP 431 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------------------------~~~~~~~e~~~l~~l~~h~ 431 (672)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|++++.++ +||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 96 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHP 96 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC-CCT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC-CCC
Confidence 468999999999999975 578899999865431 124688999999999 999
Q ss_pred ceeceEEEEEe--CCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCC
Q 005875 432 NVVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASN 509 (672)
Q Consensus 432 niv~l~~~~~~--~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~N 509 (672)
||+++++++.+ .+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 167 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSN 167 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHH
Confidence 99999999987 5678999999999999887642 34999999999999999999999998 9999999999
Q ss_pred EEecCCCCeEEeecCCCCCCCCC----CCCCCCCcccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCCCCCCC
Q 005875 510 VLINQDLDGCISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 582 (672)
Q Consensus 510 ILl~~~~~~kl~DfGla~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~ 582 (672)
||++.++.+||+|||++...... ....+++.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-- 245 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI-- 245 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence 99999999999999999765432 2346889999999998765 37789999999999999999999975321
Q ss_pred CCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 583 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+....... ..... ....+.+++.+||+.||++|||++|++++
T Consensus 246 ----~~~~~~~~~~~~~~-------~~~~~---~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 ----MCLHSKIKSQALEF-------PDQPD---IAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ----HHHHHHHHHCCCCC-------CSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ----HHHHHHHhcccCCC-------CCccc---cCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11111111111100 00111 22356778889999999999999999763
No 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6e-39 Score=342.17 Aligned_cols=242 Identities=21% Similarity=0.333 Sum_probs=195.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++..+ +||||+++++++.+++..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999975 5789999999765433 34678899999999 999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC---CeEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla~~~~~~ 532 (672)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++......
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999998642 34899999999999999999999998 99999999999998654 5999999999776543
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 533 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 533 ~---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
. ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+........ .+ .
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------~~~~~i~~~~~~~~--~~---~ 253 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYAQIKAGAYDYP--SP---E 253 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCC--TT---G
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCCCC--cc---c
Confidence 2 346899999999999999999999999999999999999999764321 11222211111100 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. ......+.+++.+||+.||++|||++|++++
T Consensus 254 ~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c---cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1122456678889999999999999999874
No 79
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.1e-39 Score=341.39 Aligned_cols=244 Identities=16% Similarity=0.299 Sum_probs=195.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc------cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+++..++||||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEeC
Confidence 578999999999999975 57899999986432 1356789999999999 999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC---eEEeecCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLM 529 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~~~ 529 (672)
+++|+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++...
T Consensus 108 ~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999888764321 1234899999999999999999999998 999999999999987655 999999999766
Q ss_pred CCC----CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 530 NVP----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 530 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+... .....+...... ..+
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~i~~~~~~---~~~ 253 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------RLFEGIIKGKYK---MNP 253 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------HHHHHHHHTCCC---CCH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------HHHHHHHcCCCC---CCc
Confidence 443 234589999999999999999999999999999999999999975321 111111111110 000
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
. .... ....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~--~~~~---~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 R--QWSH---ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp H--HHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c--cccc---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 0011 1245677888999999999999999987
No 80
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.5e-39 Score=335.68 Aligned_cols=253 Identities=23% Similarity=0.354 Sum_probs=192.4
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+..+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 468999999999999998899999999865432 235688999999998 899999999999999999999999986
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 532 (672)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 85 DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9999987432 34899999999999999999999998 999999999999999999999999998754322
Q ss_pred CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh----hccc----cccc
Q 005875 533 ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR----EEWT----AEVF 603 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~ 603 (672)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+. ......... ..+. ...+
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhccccc
Confidence 234578899999999764 589999999999999999999999986432211 000101000 0000 0001
Q ss_pred hhhhhcc------cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 604 DVELMRF------QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 604 d~~~~~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
++..... .........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111000 0001123456778889999999999999999863
No 81
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.2e-39 Score=340.45 Aligned_cols=246 Identities=23% Similarity=0.358 Sum_probs=194.6
Q ss_pred hccccccCcEEEEEEEECC-CcE----EEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|++.. ++. |++|.+.... .....+.+|+.++.++ +||||+++++++. ++..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEe
Confidence 4689999999999999653 333 7788775443 2335678899999998 9999999999885 5678999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++|+|.+++...+ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 96 LPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999997542 24888999999999999999999998 999999999999999999999999999876433
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 533 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 533 ~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
. ...++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+. .. ..........
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~----~~~~~~~~~~--- 238 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV---PD----LLEKGERLAQ--- 238 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH---HH----HHHTTCBCCC---
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH---HH----HHHcCCCCCC---
Confidence 2 2235678999999999999999999999999999999 9999986543321 11 1111110000
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.......+.+++.+||+.||++|||++|++++|+.+...
T Consensus 239 -------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 -------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 001122456788899999999999999999999998653
No 82
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.7e-39 Score=342.02 Aligned_cols=238 Identities=22% Similarity=0.358 Sum_probs=194.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|+++... ...+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 47889999997642 2345677888888887799999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 99999999742 24899999999999999999999998 99999999999999999999999999976422
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ ....+...... + .
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~~~---~------p 238 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDNPF---Y------P 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCC---C------C
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHhCCCC---C------C
Confidence 234568999999999999999999999999999999999999997643221 12222111110 0 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMD-EVVR 643 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~ 643 (672)
.. ....+.+++.+||+.||++||++. |+++
T Consensus 239 ~~---~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 RW---LEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp TT---SCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred cc---cCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 11 123566778899999999999997 6654
No 83
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-39 Score=335.80 Aligned_cols=238 Identities=19% Similarity=0.280 Sum_probs=196.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+++.. +++.||+|++++.. ...+.+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 58899999997542 2345677888898888 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC-C
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-~ 533 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 90 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp SCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999999753 24899999999999999999999998 999999999999999999999999999765433 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... ....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~---------~p~~- 225 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILNAELR---------FPPF- 225 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHCCCC---------CCTT-
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC---------CCCC-
Confidence 45689999999999999999999999999999999999999975432 1222222222110 0011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 644 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 644 (672)
....+.+++.+|++.||++|| +++|++++
T Consensus 226 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 226 --FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 123566777899999999999 89999863
No 84
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.6e-39 Score=326.13 Aligned_cols=248 Identities=24% Similarity=0.376 Sum_probs=198.9
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeC--CeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|++. ++.||+|+++..... .+.+.+|+.++.++ +||||+++++++.+. +..++||||++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccC
Confidence 468999999999999986 788999999765433 34688899998888 899999999999877 67899999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 534 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~ 534 (672)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++.++|+|||++..... ..
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~ 167 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PG 167 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TT
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-cC
Confidence 999999998543 235899999999999999999999975 4599999999999999999999999988755432 34
Q ss_pred CCCCCcccCcccccCCCCCC---ccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 535 PSRSAGYRAPEVIETRKHSH---KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~---~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
..+|+.|+|||++.+..++. ++||||||+++|||++|+.||...... ...............
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~--------- 232 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM------EIGMKVALEGLRPTI--------- 232 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH------HHHHHHHHSCCCCCC---------
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH------HHHHHHHhcCCCCCC---------
Confidence 56789999999998766554 799999999999999999999754321 111122111111111
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 650 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 650 (672)
.......+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 233 -~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 -PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 01123456778889999999999999999999999864
No 85
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2e-39 Score=363.46 Aligned_cols=248 Identities=25% Similarity=0.429 Sum_probs=204.9
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|.+.++..||||+++......++|.+|++++.++ +|+||+++++++.+ +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 568999999999999999888899999987666678899999999999 99999999999865 6789999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC-----CC
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-----~~ 534 (672)
++++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 9997432 124899999999999999999999998 999999999999999999999999999876431 22
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..++..|+|||++....++.++|||||||++|||++ |+.||.+....+ .... +....... ..
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~-i~~~~~~~----------~~ 486 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQ-VERGYRMP----------CP 486 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHH-HHTTCCCC----------CC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HHcCCCCC----------CC
Confidence 345678999999998899999999999999999999 999997643221 1111 11111110 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
......+.+++.+||+.||++|||+++|++.|+++....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 122345778888999999999999999999999887543
No 86
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.6e-39 Score=337.57 Aligned_cols=240 Identities=20% Similarity=0.345 Sum_probs=189.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCe-----------
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----------- 445 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 445 (672)
.+.||+|+||+||+|+.. +++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 468999999999999986 688999999975432 346788999999999 89999999999866442
Q ss_pred ----------------------------------------------eEEEEEecCCCchhhhhccCCCCCCCCCCHHHHH
Q 005875 446 ----------------------------------------------KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 479 (672)
Q Consensus 446 ----------------------------------------------~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~ 479 (672)
.++||||+++|+|.+++..... ....++..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHH
Confidence 7899999999999999985432 3346777899
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----------------CCCCCCCcccC
Q 005875 480 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----------------ATPSRSAGYRA 543 (672)
Q Consensus 480 ~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----------------~~~~~~~~y~a 543 (672)
.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 99999999999999998 999999999999999999999999999765432 22357889999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHH
Q 005875 544 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQI 623 (672)
Q Consensus 544 PE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 623 (672)
||++.+..++.++|||||||++|||++|..|+... ....... .... . ..........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--------~~~~~~~-~~~~----~------~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--------VRIITDV-RNLK----F------PLLFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--------HHHHHHH-HTTC----C------CHHHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--------HHHHHHh-hccC----C------CcccccCChhHHHH
Confidence 99999999999999999999999999987765310 0000000 0000 0 00112333556788
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 005875 624 GMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 624 ~~~Cl~~dP~~RPs~~evl~~ 644 (672)
+.+||+.||++|||++|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999873
No 87
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=341.17 Aligned_cols=254 Identities=23% Similarity=0.403 Sum_probs=190.3
Q ss_pred hccccccCcEEEEEEEECCCc----EEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCee------
Q 005875 380 AEVLGKGSYGTAYKAVLEEST----TVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------ 446 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~----~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------ 446 (672)
.+.||+|+||+||+|+...+. .||||+++.... ..+.+.+|++++.++ +||||+++++++...+..
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCcc
Confidence 578999999999999966433 799999876432 245788999999999 999999999999877655
Q ss_pred EEEEEecCCCchhhhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCC
Q 005875 447 LLVYDYFASGSLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 525 (672)
Q Consensus 447 ~lV~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 525 (672)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccc
Confidence 999999999999999964321 12235899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhcc
Q 005875 526 TPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEW 598 (672)
Q Consensus 526 a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 598 (672)
++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+. .........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~------~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI------YNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH------HHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH------HHHHhcCCC
Confidence 97654322 2235678999999999999999999999999999999 9999986543221 111111111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 599 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 599 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
. .........+.+++.+||+.||++|||+.|+++.|+++.+....
T Consensus 258 ~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 258 L-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp C-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred C-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 0 01112234577888899999999999999999999999877653
No 88
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3e-39 Score=340.75 Aligned_cols=255 Identities=25% Similarity=0.405 Sum_probs=203.2
Q ss_pred hccccccCcEEEEEEEEC--------CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 449 (672)
.+.||+|+||+||+|+.. ++..||+|+++.... ..+.+.+|++++.++.+||||+++++++.+++..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 578999999999999863 467899999975432 2356889999999998899999999999999999999
Q ss_pred EEecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCe
Q 005875 450 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 518 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 518 (672)
|||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCCE
Confidence 9999999999999864421 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005875 519 CISDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 591 (672)
Q Consensus 519 kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 591 (672)
||+|||++...... ....+++.|+|||++.+..++.++||||||+++|||++ |..||.+....+ ...
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 270 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFK 270 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH------HHH
Confidence 99999999765432 22335678999999998889999999999999999999 999997543221 111
Q ss_pred HhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 592 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 592 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
. ........ ........+.+++.+||+.||++|||++|+++.|+.+......
T Consensus 271 ~-~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 271 L-LKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp H-HHHTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred H-HhcCCCCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 1 11111100 0112234567788899999999999999999999999876553
No 89
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.9e-39 Score=337.28 Aligned_cols=251 Identities=26% Similarity=0.403 Sum_probs=201.8
Q ss_pred hccccccCcEEEEEEEE------CCCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||.||+|.. .+++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEEe
Confidence 47899999999999986 2347899999875432 235688899999998 99999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe
Q 005875 452 YFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 512 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl 512 (672)
|+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEE
Confidence 99999999999764321 1234889999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 005875 513 NQDLDGCISDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 585 (672)
Q Consensus 513 ~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~ 585 (672)
+.++.+||+|||++...... ....+++.|+|||++.+..++.++||||||+++|||++ |..||.+....+.
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 261 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL-- 261 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--
Confidence 99999999999999765332 22335678999999999889999999999999999999 9999986543221
Q ss_pred hhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 586 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
. .......... ........+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 262 -~----~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 -F----NLLKTGHRME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp -H----HHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -H----HHhhcCCcCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1 1111111100 0112234567888899999999999999999999998764
No 90
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.4e-39 Score=330.28 Aligned_cols=249 Identities=26% Similarity=0.439 Sum_probs=203.5
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|...+++.||+|+++......+.+.+|++++..+ +||||+++++++. ++..++||||+++++|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 468999999999999998888999999987766778899999999999 9999999999986 45689999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-----C
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 534 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-----~ 534 (672)
+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....... .
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9996432 124899999999999999999999998 9999999999999999999999999997654322 2
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
..++..|+|||++.+..++.++||||||+++|||++ |+.||.+....+ ....+. ...... . .
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~-~~~~~~-------~---~ 232 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------VIQNLE-RGYRMV-------R---P 232 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHH-TTCCCC-------C---C
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH------HHHHHh-cccCCC-------C---c
Confidence 335678999999998889999999999999999999 999997543211 111111 111100 0 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
......+.+++.+||+.||++|||++++++.|+++.....
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 1123456778889999999999999999999999986643
No 91
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.9e-39 Score=333.33 Aligned_cols=248 Identities=23% Similarity=0.346 Sum_probs=195.4
Q ss_pred hccccccCcEEEEEEEECC-C-------cEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEE-S-------TTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~-------~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 450 (672)
.+.||+|+||+||+|+... + ..||+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEE
Confidence 4689999999999998653 2 469999986553 3356788999999999 8999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC--------eEEee
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--------GCISD 522 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~--------~kl~D 522 (672)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999997533 23899999999999999999999998 999999999999998887 99999
Q ss_pred cCCCCCCCCCCCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccc
Q 005875 523 FGLTPLMNVPATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAE 601 (672)
Q Consensus 523 fGla~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (672)
||++..........+++.|+|||++.+ ..++.++||||||+++|||++|..|+..... ...... .......
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-----~~~~~~-~~~~~~~-- 236 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQRKLQ-FYEDRHQ-- 236 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHH-HHHTTCC--
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-----hHHHHH-HhhccCC--
Confidence 999876655444456888999999987 6789999999999999999996555432211 111111 1111000
Q ss_pred cchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 602 VFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 602 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
. . . .....+.+++.+||+.||++|||++|++++|+++.....
T Consensus 237 ~-~------~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 237 L-P------A---PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp C-C------C---CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred C-C------C---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 0 0 0 011245678889999999999999999999999886543
No 92
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.4e-39 Score=335.57 Aligned_cols=249 Identities=26% Similarity=0.402 Sum_probs=205.4
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|.+.+ +..||+|++.......+.+.+|++++.++ +||||+++++++.+++..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 4689999999999999765 67899999987655567899999999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCCC----
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT---- 534 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~---- 534 (672)
.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99997543 345899999999999999999999998 99999999999999999999999999977653321
Q ss_pred -CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 535 -PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 535 -~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
..+++.|+|||++.+..++.++||||||+++|||++ |..||......+. .. ......... .
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~---~~----~~~~~~~~~----------~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YE----LLEKDYRME----------R 233 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---HH----HHHTTCCCC----------C
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH----HHhccCCCC----------C
Confidence 224667999999998899999999999999999999 9999976543221 11 111111100 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
.......+.+++.+|++.||++|||++|+++.|+++.+..
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1112345778888999999999999999999999987653
No 93
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.9e-39 Score=333.58 Aligned_cols=246 Identities=22% Similarity=0.372 Sum_probs=189.6
Q ss_pred hccccccCcEEEEEEEECC----CcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|.+.. +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++ .++..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEE-ccCccEEEEecC
Confidence 4689999999999999753 34699998875432 245688899999998 899999999998 456789999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 533 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 533 (672)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999997764332
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 534 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 534 -----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
...+++.|+|||++.+..++.++||||||+++|||++ |..||.+....+. ...+...... .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~------~~~i~~~~~~-~------ 237 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV------IGRIENGERL-P------ 237 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH------HHHHHTTCCC-C------
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH------HHHHHcCCCC-C------
Confidence 2234678999999998899999999999999999997 9999986543321 1111111100 0
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 238 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 238 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0112234567788899999999999999999999999764
No 94
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.6e-38 Score=327.01 Aligned_cols=254 Identities=17% Similarity=0.178 Sum_probs=197.3
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceec-eEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVP-LRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~-l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|+. .+++.||+|++.... ..+.+.+|++++..+ +|++++. +..++..++..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 46899999999999996 567889999865543 335688999999999 5555554 445556777889999999 999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe---cCCCCeEEeecCCCCCCCCC--
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~-- 532 (672)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++......
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999997432 24899999999999999999999998 9999999999999 78899999999999765432
Q ss_pred ---------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 533 ---------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 533 ---------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
....+++.|+|||++.+..++.++|||||||++|||++|+.||.+......................
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh----
Confidence 2345788999999999999999999999999999999999999876554443322211111000000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
. . .... ....+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 240 ~-~--~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 E-V--LCKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp H-H--HTTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred h-h--hhcc---CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0 0 0011 12457788889999999999999999999999987653
No 95
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.6e-41 Score=347.77 Aligned_cols=255 Identities=23% Similarity=0.375 Sum_probs=182.8
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHH-cCCCceeceEEEEEeCC----eeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. ++.||||++... ....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 468999999999999875 889999998643 345677788887763 38999999999998876 7899999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcccCCCCCCCEEecCCCCeEEeecCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 526 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--------~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 526 (672)
+|+|.++++.. .+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999643 3788889999999999999999 776 999999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCCcccCcccccCC------CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 005875 527 PLMNVPA--------TPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 582 (672)
Q Consensus 527 ~~~~~~~--------~~~~~~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~el~tg----------~~pf~~~~~~~ 582 (672)
....... ...+|+.|+|||++.+. .++.++|||||||++|||++| ..||......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654332 22588999999999776 344689999999999999999 66665432211
Q ss_pred CCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 583 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
. ............... +.........+....+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 236 ~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 P-SVEEMRKVVCEQKLR-----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCC-CHHHHTTSCCC-----CCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred c-cHHHHHHHHHHhhcC-----CCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1 000111111111111 111111111355677889999999999999999999999999988654
No 96
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.4e-38 Score=337.52 Aligned_cols=242 Identities=24% Similarity=0.368 Sum_probs=196.2
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccC----hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+. .+++.||||++...... .+.+.+|++++.++ +||||+++++++.+++..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCC
Confidence 46799999999999996 46788999998754322 24678999999999 99999999999999999999999997
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 534 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~ 534 (672)
|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 138 -g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 58888875322 34899999999999999999999998 99999999999999999999999999988777667
Q ss_pred CCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 535 PSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 535 ~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
..+++.|+|||++. ...++.++|||||||++|||++|+.||..... ......+...... ... ..
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~~~-~~~------~~ 276 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNESP-ALQ------SG 276 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCC-CCC------CT
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcCCC-CCC------CC
Confidence 78999999999984 56789999999999999999999999975432 1112222211111 000 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 646 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 646 (672)
.....+.+++.+||+.||++|||++|++++-.
T Consensus 277 ---~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 277 ---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred ---CCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11234667888999999999999999987543
No 97
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=333.85 Aligned_cols=252 Identities=27% Similarity=0.421 Sum_probs=193.9
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||+|+.. ++.||+|++... ...+.+.+|++++.++ +||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 468999999999999986 688999998643 2356788999999999 9999999999876 4589999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC-eEEeecCCCCCCCCC-CCCCC
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-GCISDFGLTPLMNVP-ATPSR 537 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-~kl~DfGla~~~~~~-~~~~~ 537 (672)
++++.... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++...... ....+
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 99975431 234788999999999999999999932223999999999999998887 799999999765433 23457
Q ss_pred CCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHHH
Q 005875 538 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEM 617 (672)
Q Consensus 538 ~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 617 (672)
++.|+|||++.+..++.++||||||+++|||++|+.||....... .......... ..... .....
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~-~~~~~----------~~~~~ 230 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVHNG-TRPPL----------IKNLP 230 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHHTT-CCCCC----------BTTCC
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHhcC-CCCCc----------ccccC
Confidence 899999999999999999999999999999999999997543221 1111111111 00000 11122
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 618 VQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 618 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
..+.+++.+||+.||++|||++|+++.|+.+.+...
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 456778889999999999999999999999987654
No 98
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-39 Score=334.36 Aligned_cols=237 Identities=22% Similarity=0.292 Sum_probs=186.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccCh---hhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK---RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.++||+|+||+||+|+.. +++.||||++....... ..+..|+..+.++.+|+||+++++++.+++..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 468999999999999976 68899999987654332 344556666666668999999999999999999999999 6
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 69988886532 34999999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 533 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
....+|+.|+|||++.+ .++.++|||||||++|||++|..|+..... ...+ ... ...+...
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~~~~-~~~----~~~~~~~---- 274 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------WQQL-RQG----YLPPEFT---- 274 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------HHHH-TTT----CCCHHHH----
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------HHHH-hcc----CCCcccc----
Confidence 23457899999999876 789999999999999999999777653210 0111 111 1111110
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1123457788889999999999999999863
No 99
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.5e-38 Score=332.55 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=191.9
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
+.||+|+||+||+|... +++.||||++..... ..+.+.+|++++.++.+||||+++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 57999999999999954 688999999976533 3567889999999876899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC---eEEeecCCCCCCCCC---
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP--- 532 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~~~~~~--- 532 (672)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999743 24899999999999999999999998 999999999999998876 999999998754321
Q ss_pred --------CCCCCCCcccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh-----h---HHHH
Q 005875 533 --------ATPSRSAGYRAPEVIET-----RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL-----P---RWVQ 591 (672)
Q Consensus 533 --------~~~~~~~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~-----~---~~~~ 591 (672)
....+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.... . ....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 12347889999999975 5588999999999999999999999987654331100 0 0000
Q ss_pred HhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 592 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 592 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
..+..... ..... ... .....+.+++.+||+.||++|||++|++++
T Consensus 251 ~~i~~~~~-~~~~~---~~~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKY-EFPDK---DWA---HISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCC-CCCHH---HHT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCc-ccCch---hcc---cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00111000 00000 000 122456788889999999999999999884
No 100
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.6e-39 Score=350.30 Aligned_cols=244 Identities=17% Similarity=0.291 Sum_probs=194.2
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.++||+|+||+||+|+..+ ++.||+|++++.. .....+.+|..++..+ +||||+++++++.+++..++||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 4689999999999999875 6789999997532 2234588899999888 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 158 gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 158 GGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999997532 34999999999999999999999998 999999999999999999999999999765432
Q ss_pred ---CCCCCCCcccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 533 ---ATPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 533 ---~~~~~~~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
....||+.|+|||++. ...++.++|||||||++|||++|+.||.+....+ ....+...........
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~p~ 304 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKERFQFPT 304 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCCS
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH------HHHhhhhccccccCCc
Confidence 2356899999999997 5678999999999999999999999998643222 1222221110000000
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 644 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 644 (672)
..... ...+.+++.+|++.+|++ ||+++|++++
T Consensus 305 ----~~~~~---s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 305 ----QVTDV---SENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ----SCCCS---CHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ----ccccC---CHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00112 234566777999888888 9999999884
No 101
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.1e-38 Score=337.25 Aligned_cols=255 Identities=23% Similarity=0.371 Sum_probs=200.5
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHH-cCCCceeceEEEEEeCC----eeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. ++.||+|++... ....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 578999999999999985 889999998653 245677888888873 38999999999998876 7899999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcccCCCCCCCEEecCCCCeEEeecCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 526 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--------~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 526 (672)
+|+|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999742 3899999999999999999999 666 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCcccccCCC------CCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 005875 527 PLMNVP--------ATPSRSAGYRAPEVIETRK------HSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 582 (672)
Q Consensus 527 ~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~~DvwS~Gvvl~el~tg----------~~pf~~~~~~~ 582 (672)
...... ....+++.|+|||++.+.. ++.++|||||||++|||+|| ..||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 655432 2345788999999997753 34689999999999999999 67776543322
Q ss_pred CCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 583 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
. ....+.............. ......+....+.+++.+||+.||++|||++|++++|+++.+..
T Consensus 275 ~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 P-SVEEMRKVVCEQKLRPNIP-----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp C-CHHHHHHHHTTSCCCCCCC-----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred c-cHHHHHHHHHHHHhCCCCc-----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 1 1122222221111111111 00011355677889999999999999999999999999998764
No 102
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-39 Score=332.15 Aligned_cols=247 Identities=23% Similarity=0.355 Sum_probs=200.1
Q ss_pred ccccccCcEEEEEEEEC---CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 381 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
+.||+|+||+||+|.+. ++..||+|+++.... ..+.+.+|++++..+ +||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 47999999999999864 567899999976432 345688999999999 999999999999 55678999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 94 GPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999999643 234899999999999999999999998 9999999999999999999999999997654321
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 534 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 534 -----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+.... ...
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~-~~~------ 233 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGK-RME------ 233 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTC-CCC------
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCC-cCC------
Confidence 2235678999999998889999999999999999998 999997644321 111111111 000
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
........+.+++.+||+.||++||++.|++++|+++.....
T Consensus 234 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 234 ----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp ----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 011223467778889999999999999999999999987654
No 103
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.6e-39 Score=339.28 Aligned_cols=239 Identities=24% Similarity=0.310 Sum_probs=194.7
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+... ++.||+|+++... ...+.+..|..++..+.+||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 4689999999999999865 6789999997642 2345677888888877689999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976422
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+...... ..
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~~~---------~p 241 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHNVA---------YP 241 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------CC
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCCCC---------CC
Confidence 23456899999999999999999999999999999999999999764321 122222221110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 644 (672)
. .....+.+++.+||+.||++||+ ++|++++
T Consensus 242 ~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 K---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp T---TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred C---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1 12235667788999999999995 5777764
No 104
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=342.15 Aligned_cols=240 Identities=20% Similarity=0.303 Sum_probs=194.0
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+++... ++.||+|++.... ...+.+.+|++++..+ +|||||++++++.+.+..++||||++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 4689999999999999764 6789999986542 2345788899999999 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 99 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 99 GGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp TEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999742 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 533 -ATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ............
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~---~~~~~~~~~~~~---------- 237 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS---KEIVHTFETTVV---------- 237 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH---HHHHHHHHHCCC----------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH---HHHHHHHhhccc----------
Confidence 34568999999999974 4589999999999999999999999976543321 111111111100
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVR 643 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~ 643 (672)
.........+.+++.+||+.||++||+ ++++.+
T Consensus 238 --~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 001112345677888999999999998 777765
No 105
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.5e-38 Score=340.97 Aligned_cols=261 Identities=23% Similarity=0.359 Sum_probs=197.0
Q ss_pred hcccccc--CcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKG--SYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+| +||+||+|+.. +++.||||++...... .+.+.+|+++++.+ +|||||++++++.+++..++||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEcc
Confidence 4689999 99999999976 5889999999765433 24577899999998 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC---
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN--- 530 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~--- 530 (672)
++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999997543 234899999999999999999999998 9999999999999999999999999874321
Q ss_pred --------CCCCCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh-----
Q 005875 531 --------VPATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR----- 595 (672)
Q Consensus 531 --------~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----- 595 (672)
......+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. .........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDT 260 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC-----------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccc
Confidence 1223457888999999987 67899999999999999999999999865433221 000000000
Q ss_pred -----hcc------------ccccch--------hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHh
Q 005875 596 -----EEW------------TAEVFD--------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 648 (672)
Q Consensus 596 -----~~~------------~~~~~d--------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i 648 (672)
+.. ...... ...............+.+++.+||+.||++|||++|++++ ++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 000 000000 0000000111223457888999999999999999999975 5554
Q ss_pred h
Q 005875 649 R 649 (672)
Q Consensus 649 ~ 649 (672)
.
T Consensus 341 ~ 341 (389)
T 3gni_B 341 K 341 (389)
T ss_dssp -
T ss_pred h
Confidence 4
No 106
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=366.13 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=198.9
Q ss_pred cccccCcEEEEEEEEC---CCcEEEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 382 VLGKGSYGTAYKAVLE---ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 382 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.||+|+||+||+|.+. ++..||||+++... ...+++.+|++++.++ +|||||++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999864 45679999998653 2457899999999999 99999999999976 5689999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCCC--
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT-- 534 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~-- 534 (672)
+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 421 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 421 PLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp BHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999999743 234899999999999999999999998 99999999999999999999999999987643221
Q ss_pred -----CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 535 -----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 535 -----~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+. ... +.......
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~------~~~-i~~~~~~~------- 559 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV------MAF-IEQGKRME------- 559 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH------HHH-HHTTCCCC-------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH------HHH-HHcCCCCC-------
Confidence 123578999999999999999999999999999998 9999986543221 111 11111110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
........+.+++.+||+.+|++||+++++++.|+.+.....
T Consensus 560 ---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 560 ---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp ---CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred ---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 111233567788889999999999999999999999876543
No 107
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6e-39 Score=336.09 Aligned_cols=263 Identities=22% Similarity=0.340 Sum_probs=200.6
Q ss_pred hccccccCcEEEEEEEEC-----CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeC--CeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~ 450 (672)
.+.||+|+||+||++.+. +++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEE
Confidence 468999999999998753 578899999976532 245688999999999 899999999999874 5779999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999743 2899999999999999999999998 9999999999999999999999999997664
Q ss_pred CC-------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 531 VP-------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 531 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
.. ....+++.|+|||++.+..++.++||||||+++|||++|..||........ ....+..............
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL-ELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-HHHCSCCHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh-hhhcccccchhHHHHHHHH
Confidence 32 223467779999999998899999999999999999999999874321100 0000000000000000000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
+... ...........+.+++.+||+.||++|||++|+++.|+.+.+....
T Consensus 265 ~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 265 ERGE-RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred hccc-CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 0000 0111122335677888899999999999999999999999876543
No 108
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=337.89 Aligned_cols=264 Identities=23% Similarity=0.342 Sum_probs=192.4
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHH-HcCCCceeceEEEEEeC-----CeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGR-VGQHPNVVPLRAYYYSK-----DEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~-l~~h~niv~l~~~~~~~-----~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|+. +++.||||++.... ...+..|.++... ..+|+||+++++.+... ...++||||+
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 46899999999999987 47899999986543 3444555544332 23899999999866532 2568999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCcccCCCCCCCEEecCCCCeEEeecC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM---------GGPKFTHGNIKASNVLINQDLDGCISDFG 524 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~---------~~~~ivHrDLk~~NILl~~~~~~kl~DfG 524 (672)
++|+|.+++.... .++..+..++.||+.||+|||+. + |+||||||+|||++.++.+||+|||
T Consensus 95 ~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 95 PNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp TTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCCT
T ss_pred CCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeecc
Confidence 9999999997432 58899999999999999999998 7 9999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCCCcccCcccccC-------CCCCCccchhhHHHHHHHHHhCCCCCCCCCC-CCCC
Q 005875 525 LTPLMNVP------------ATPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR-DDMV 584 (672)
Q Consensus 525 la~~~~~~------------~~~~~~~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~-~~~~ 584 (672)
++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|..||..... .+..
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 99755321 13357889999999987 4567789999999999999999777643322 2211
Q ss_pred Chh----------HHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 585 DLP----------RWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 585 ~~~----------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
... ...............+.. ...........+.+++.+||+.||++|||++|+++.|+++...-..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 110 011111111111111110 1111223556788899999999999999999999999999977655
Q ss_pred CCCC
Q 005875 655 NRPS 658 (672)
Q Consensus 655 ~~~s 658 (672)
++..
T Consensus 323 ~~~~ 326 (336)
T 3g2f_A 323 NKSV 326 (336)
T ss_dssp ----
T ss_pred cccC
Confidence 4433
No 109
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=332.23 Aligned_cols=255 Identities=22% Similarity=0.297 Sum_probs=192.8
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEeccccc------ChhhHHHHHHHHHHHc--CCCceeceEEEEEeCC-----e
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV------GKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKD-----E 445 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~-----~ 445 (672)
.+.||+|+||+||+|+. .+++.||+|++..... ....+.+|++++.++. +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46899999999999996 4578899999874322 1346778888887774 5999999999998765 4
Q ss_pred eEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCC
Q 005875 446 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 525 (672)
Q Consensus 446 ~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 525 (672)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 789999997 59999997543 233899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhh----hhcc
Q 005875 526 TPLMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV----REEW 598 (672)
Q Consensus 526 a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~----~~~~ 598 (672)
+....... ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.. ....... ...+
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~ 243 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL---GKIFDLIGLPPEDDW 243 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH---HHHHHHHCCCCTTTS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCChhhc
Confidence 98665433 234788999999999999999999999999999999999999765432211 1111110 0111
Q ss_pred ccccc--hhhhhc--ccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 599 TAEVF--DVELMR--FQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 599 ~~~~~--d~~~~~--~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
..... ...... ... ..+....+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 10000 000000 000 01123456778889999999999999999874
No 110
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=344.10 Aligned_cols=250 Identities=25% Similarity=0.409 Sum_probs=191.3
Q ss_pred hccccccCcEEEEEEEECC--C--cEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEe-CCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLEE--S--TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-KDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~--~--~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|++.+ + ..||+|.++.... ..+.+.+|+.++.++ +||||+++++++.+ ++..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4689999999999998642 2 3589998875432 245788999999998 89999999998754 4578999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++|+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 173 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999997432 34889999999999999999999998 999999999999999999999999999765322
Q ss_pred --------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 533 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 533 --------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
....+++.|+|||++.+..++.++|||||||++|||+| |.+||......+. ... ...... . .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~---~~~---~~~~~~-~--~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---TVY---LLQGRR-L--L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH---HHH---HHTTCC-C--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH---HHH---HHcCCC-C--C
Confidence 12235678999999999999999999999999999999 6778875543321 111 111110 0 0
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
. .......+.+++.+||+.||++|||++|+++.|+++......
T Consensus 317 ~--------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 317 Q--------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp C--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred C--------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 0 011224577888899999999999999999999999876553
No 111
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-39 Score=331.10 Aligned_cols=249 Identities=23% Similarity=0.350 Sum_probs=196.5
Q ss_pred hccccccCcEEEEEEEECC-C---cEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCee-EEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLEE-S---TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK-LLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~---~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~-~lV~e~ 452 (672)
.+.||+|+||+||+|++.+ + ..+|+|++..... ..+.+.+|++++..+ +||||+++++++.+.+.. ++||||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEec
Confidence 4789999999999998543 2 2699999875432 235688999999999 899999999999876655 999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV- 531 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~- 531 (672)
+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999753 234899999999999999999999998 99999999999999999999999999975432
Q ss_pred -------CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCC-CCCCCCCCChhHHHHHhhhhccccccc
Q 005875 532 -------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ-SPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 532 -------~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
.....+++.|+|||.+.+..++.++||||||+++|||++|..|+. .....+ +.. . ........
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~---~~~---~-~~~~~~~~-- 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD---LTH---F-LAQGRRLP-- 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG---HHH---H-HHTTCCCC--
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH---HHH---H-hhcCCCCC--
Confidence 123345778999999999999999999999999999999655543 322111 111 1 11111000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 249 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 249 --------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred --------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 001122456788889999999999999999999999987754
No 112
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=335.15 Aligned_cols=249 Identities=25% Similarity=0.473 Sum_probs=195.6
Q ss_pred hccccccCcEEEEEEEECCC-----cEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLEES-----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~-----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|....+ ..||+|+++.... ....+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeC
Confidence 46899999999999986532 3599999875432 234688999999999 999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 128 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 128 MENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999997532 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred C-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 533 A-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 533 ~-------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
. ...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+. ......
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~~-~~~~~~--- 270 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE------VMKAIN-DGFRLP--- 270 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHH-TTCCCC---
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHH-CCCcCC---
Confidence 1 1224667999999999999999999999999999999 999997543211 111111 111000
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
........+.+++.+||+.+|++||++.|+++.|+++.+...
T Consensus 271 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 271 -------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp -------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred -------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 011223456778889999999999999999999999876543
No 113
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=344.53 Aligned_cols=246 Identities=22% Similarity=0.354 Sum_probs=193.8
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
+.||+|+||.||+|... +++.||+|+++... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 57999999999999975 57899999987653 2456788999999999 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe--cCCCCeEEeecCCCCCCCCC---C
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI--NQDLDGCISDFGLTPLMNVP---A 533 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl--~~~~~~kl~DfGla~~~~~~---~ 533 (672)
.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..... .
T Consensus 174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~ 246 (373)
T 2x4f_A 174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246 (373)
T ss_dssp HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence 99886432 24899999999999999999999998 9999999999999 56788999999999766433 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+....+... . ......
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~~~~~i~~~~~~~~--~---~~~~~~ 315 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA------ETLNNILACRWDLE--D---EEFQDI 315 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCCSC--S---GGGTTS
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhccCCCC--h---hhhccC
Confidence 345889999999999999999999999999999999999999764321 22222222222110 0 011112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHh
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEV 648 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i 648 (672)
...+.+++.+||+.||++|||++|+++ .+++.
T Consensus 316 ---~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 316 ---SEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ---CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 245677788999999999999999998 44443
No 114
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=340.25 Aligned_cols=255 Identities=16% Similarity=0.231 Sum_probs=187.9
Q ss_pred hccccccCcEEEEEEEEC----CCcEEEEEEeccccc------------ChhhHHHHHHHHHHHcCCCceeceEEEEEe-
Q 005875 380 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV------------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS- 442 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~- 442 (672)
.+.||+|+||+||+|... .+..+|+|++..... ....+.+|+..+..+ +||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence 468999999999999976 467899999875421 122345566666666 89999999999988
Q ss_pred ---CCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC--C
Q 005875 443 ---KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL--D 517 (672)
Q Consensus 443 ---~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~--~ 517 (672)
....++||||+ +++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCc
Confidence 67889999999 999999997432 5899999999999999999999998 99999999999999887 9
Q ss_pred eEEeecCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 005875 518 GCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 586 (672)
Q Consensus 518 ~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~ 586 (672)
+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--A 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--H
Confidence 999999999655321 233578899999999999999999999999999999999999964321110 0
Q ss_pred hHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 587 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 587 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.......... .. ................+.+++.+||+.||++|||++|+++.|+++...
T Consensus 270 ~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 270 VQTAKTNLLD----EL-PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp HHHHHHHHHH----TT-THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred HHHHHHhhcc----cc-cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 0111111100 00 000000000002234677788899999999999999999999987653
No 115
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.5e-39 Score=331.98 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=195.8
Q ss_pred hccccccCcEEEEEEEE-----CCCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeC--CeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~ 450 (672)
.+.||+|+||.||+|++ .+++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+. ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEE
Confidence 46899999999999984 3578899999975432 346789999999999 899999999999876 6689999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999996432 34899999999999999999999998 9999999999999999999999999997654
Q ss_pred CC-------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC--------CCCCChhHHHHHhhh
Q 005875 531 VP-------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVDLPRWVQSVVR 595 (672)
Q Consensus 531 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~--------~~~~~~~~~~~~~~~ 595 (672)
.. ....++..|+|||++.+..++.++||||||+++|||++|..|+..... ...............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 32 233467779999999998999999999999999999999998653210 000000000000000
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 005875 596 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 649 (672)
Q Consensus 596 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 649 (672)
... ...........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 258 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGK----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000 00011122346778888999999999999999999999875
No 116
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2e-38 Score=333.56 Aligned_cols=238 Identities=22% Similarity=0.342 Sum_probs=187.5
Q ss_pred hccccccCcEEEEEEEE----CCCcEEEEEEeccccc-----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 450 (672)
.+.||+|+||+||+++. .+++.||+|+++.... ....+.+|++++..+ +||||+++++++.+++..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence 46899999999999997 4688999999976432 234577899999998 8999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999743 24889999999999999999999998 9999999999999999999999999987543
Q ss_pred C----CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhh
Q 005875 531 V----PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 606 (672)
Q Consensus 531 ~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 606 (672)
. .....|++.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+......
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~------- 239 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKILKCKLN------- 239 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCC-------
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCC-------
Confidence 2 22345889999999999999999999999999999999999999764321 112222211110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005875 607 LMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 644 (672)
Q Consensus 607 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 644 (672)
.. ......+.+++.+||+.||++|| +++|++++
T Consensus 240 --~p---~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 240 --LP---PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --CC---TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CC---CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 00 11123566788899999999999 78888873
No 117
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=338.69 Aligned_cols=248 Identities=14% Similarity=0.213 Sum_probs=198.6
Q ss_pred hccccccCcEEEEEEE------ECCCcEEEEEEecccccChhhHHHHHHHHHHHc--CCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAV------LEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|. ...++.||+|+++.. ...++..|++++.++. .|+||+++++++..++..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4689999999999994 446788999998754 3567888888888873 28999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC-----------CCCeEE
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGCI 520 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-----------~~~~kl 520 (672)
|+++|+|.++++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999997543323455999999999999999999999998 999999999999998 899999
Q ss_pred eecCCCCCCC------CCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhh
Q 005875 521 SDFGLTPLMN------VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 594 (672)
Q Consensus 521 ~DfGla~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 594 (672)
+|||+|+... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------- 293 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------- 293 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----------
Confidence 9999996542 12244589999999999999999999999999999999999999964322110
Q ss_pred hhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHhhhcCCC
Q 005875 595 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMR-PNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 595 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~i~~~~~~ 654 (672)
. ........ ...+ .+.+++..|++.+|.+| |+++++.+.|+++.+....
T Consensus 294 ----~---~~~~~~~~-~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 294 ----K---PEGLFRRL-PHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp ----E---ECSCCTTC-SSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred ----e---echhcccc-CcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 0 00000011 1122 34456669999999998 6789999999998877543
No 118
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.5e-39 Score=339.10 Aligned_cols=243 Identities=24% Similarity=0.373 Sum_probs=192.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|... +++.||+|++.... ....+|++++.++.+||||+++++++.+++..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 468999999999999976 47789999997543 34567888888887899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC----CCeEEeecCCCCCCCCC--
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD----LDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~----~~~kl~DfGla~~~~~~-- 532 (672)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999743 34899999999999999999999998 9999999999998543 34999999999765432
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+|+.|+|||++.+..++.++|||||||++|||++|..||....... .......+........ . ...
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~~--~---~~~ 247 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEILARIGSGKFSLS--G---GYW 247 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHHHHHHHHHCCCCCC--S---TTT
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHHHHHHHccCCcccC--c---ccc
Confidence 24567899999999988889999999999999999999999998543221 1122222221111100 0 001
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. .....+.+++.+||+.||++|||++|++++
T Consensus 248 ~---~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 248 N---SVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp T---TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred c---cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 122356677789999999999999999984
No 119
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-38 Score=327.68 Aligned_cols=248 Identities=27% Similarity=0.435 Sum_probs=188.4
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+..+ .||+|+++..... .+.+.+|++++.++ +||||+++++++ .....++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 4689999999999998653 5999998765433 35688899999998 899999999965 556789999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 532 (672)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 105 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999996432 34899999999999999999999998 999999999999999999999999998754321
Q ss_pred --CCCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 533 --ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 533 --~~~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
....+++.|+|||++. +..++.++||||||+++|||++|+.||......+ ............. ..
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~----~~ 247 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------QIIEMVGRGSLSP----DL 247 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH------HHHHHHHHTSCCC----CT
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH------HHHHHhcccccCc----ch
Confidence 2235788999999986 5668889999999999999999999997543221 1111111111110 00
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 650 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 650 (672)
.. ........+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 248 ~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 011223567788889999999999999999999998864
No 120
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=342.13 Aligned_cols=265 Identities=16% Similarity=0.246 Sum_probs=206.6
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCC--eeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+... ++.||||++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 4689999999999999765 7899999997543 2356788999999999 8999999999998765 6799999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe----cCCCCeEEeecCCCCCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl----~~~~~~kl~DfGla~~~~ 530 (672)
+|+|.+++..... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999975432 233899999999999999999999998 9999999999999 778889999999997654
Q ss_pred CC---CCCCCCCcccCcccccC--------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 531 VP---ATPSRSAGYRAPEVIET--------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 531 ~~---~~~~~~~~y~aPE~~~~--------~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
.. ....+++.|+|||++.+ ..++.++|||||||++|||++|+.||........ .......+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCT
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCc
Confidence 33 23457899999999865 5678899999999999999999999975433221 11222222222111
Q ss_pred ccc------------chhhhhc-ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 600 AEV------------FDVELMR-FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 600 ~~~------------~d~~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
... +...... ..........+.+++.+||+.||++||+++|+++.++++.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 000 0001111 1122455667788999999999999999999999999987653
No 121
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5e-39 Score=346.36 Aligned_cols=190 Identities=26% Similarity=0.433 Sum_probs=154.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCC--eeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e~~ 453 (672)
.+.||+|+||+||+|... +++.||+|++...... ...+.+|+.++..+.+||||+++++++..++ ..|+||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 468999999999999965 5789999998754332 3457789999999966999999999998654 689999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC--
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-- 531 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~-- 531 (672)
+ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 8 5999999742 3899999999999999999999998 99999999999999999999999999975422
Q ss_pred -----------------------CCCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 005875 532 -----------------------PATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 579 (672)
Q Consensus 532 -----------------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~ 579 (672)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|++||.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112357889999999976 678999999999999999999999998654
No 122
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=336.92 Aligned_cols=242 Identities=21% Similarity=0.335 Sum_probs=182.1
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+|+..+ ++.||+|+++... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 4689999999999999864 6789999987643 356688899999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC---CCCeEEeecCCCCCCCCC---
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~~--- 532 (672)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 207 (349)
T 2w4o_A 136 FDRIVEK-----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207 (349)
T ss_dssp HHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence 9999742 34899999999999999999999998 999999999999975 889999999999765433
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 533 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
....+++.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+...... ...+ ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~i~~~~~~--~~~~---~~-- 275 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----FMFRRILNCEYY--FISP---WW-- 275 (349)
T ss_dssp -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----HHHHHHHTTCCC--CCTT---TT--
T ss_pred ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----HHHHHHHhCCCc--cCCc---hh--
Confidence 23457899999999999999999999999999999999999997543221 111112111110 0000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||+.|++++
T Consensus 276 -~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 276 -DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1123456778889999999999999999874
No 123
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8e-39 Score=334.29 Aligned_cols=255 Identities=27% Similarity=0.381 Sum_probs=202.2
Q ss_pred hccccccCcEEEEEEEE------CCCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCC-eeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lV~ 450 (672)
.+.||+|+||+||+|+. .+++.||+|+++.... ..+.+.+|++++.++.+||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 57899999999999984 2457899999976533 23568899999999988999999999988755 489999
Q ss_pred EecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeE
Q 005875 451 DYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC 519 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~k 519 (672)
||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 999999999999754321 0223789999999999999999999998 99999999999999999999
Q ss_pred EeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 005875 520 ISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQS 592 (672)
Q Consensus 520 l~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~ 592 (672)
|+|||++....... ...+++.|+|||++.+..++.++||||||+++|||+| |..||.+....+ ....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 99999997654332 1235678999999999999999999999999999998 999997654322 1111
Q ss_pred hhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 593 VVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 593 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.......... .......+.+++.+||+.||++|||++|++++|+.+.+...
T Consensus 263 ~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 263 RLKEGTRMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp HHHHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HhccCccCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1111111000 01122456778889999999999999999999999987643
No 124
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.3e-38 Score=337.71 Aligned_cols=238 Identities=18% Similarity=0.199 Sum_probs=196.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+++..++||||++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 468999999999999976 57899999986542 2345678899999988 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC-C
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-~ 533 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 125 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 125 GGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp TCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 99999999743 23899999999999999999999998 999999999999999999999999999766443 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccCh
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 613 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 613 (672)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+...... ..
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~~~---------~p--- 258 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIYEKIVSGKVR---------FP--- 258 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------CC---
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HHHHHHHcCCCC---------CC---
Confidence 456899999999999999999999999999999999999999754321 122222221110 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 005875 614 EEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 644 (672)
Q Consensus 614 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 644 (672)
......+.+++.+||+.||++||+ ++|++++
T Consensus 259 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 112245677888999999999998 8888873
No 125
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.5e-38 Score=332.60 Aligned_cols=254 Identities=23% Similarity=0.404 Sum_probs=200.7
Q ss_pred hccccccCcEEEEEEEECC-CcE--EEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STT--VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~--vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+|+... +.. +++|+++... ...+.+.+|++++.++.+||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 4689999999999999653 443 4899887532 2346788999999998789999999999999999999999999
Q ss_pred CCchhhhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeec
Q 005875 455 SGSLSTLLHGNRG-----------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDF 523 (672)
Q Consensus 455 ~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~Df 523 (672)
+|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEccc
Confidence 9999999975430 12345899999999999999999999998 999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 524 GLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 524 Gla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
|+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||.+....+ ....+. ....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~~-~~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKLP-QGYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHGG-GTCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HHHHhh-cCCC
Confidence 998754321 22345778999999998889999999999999999998 999997543211 111111 1110
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.. ........+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 260 ~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 260 LE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CC----------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00 001122456778889999999999999999999999987764
No 126
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-39 Score=344.44 Aligned_cols=243 Identities=21% Similarity=0.381 Sum_probs=196.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|... +++.||+|++..... ....+.+|++++..+ +||||+++++++.+++..++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 468999999999999976 578899999875432 345688999999998 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC--CCCeEEeecCCCCCCCCCC--
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~--~~~~kl~DfGla~~~~~~~-- 533 (672)
|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 135 L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 99999743 234899999999999999999999998 999999999999974 4779999999998765432
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 534 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 534 -~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
...+|+.|+|||++.+..++.++|||||||++|||++|..||.+.... .....+....+.. +.. ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~------~~~~~i~~~~~~~---~~~--~~-- 274 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL------ETLQNVKRCDWEF---DED--AF-- 274 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHHCCCCC---CSS--TT--
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCC---Ccc--cc--
Confidence 235789999999999999999999999999999999999999864321 1122222111110 000 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 275 -~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 -SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1123456778889999999999999999974
No 127
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.8e-38 Score=328.89 Aligned_cols=249 Identities=25% Similarity=0.405 Sum_probs=194.9
Q ss_pred hccccccCcEEEEEEEECCC----cEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEE-eCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYY-SKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~-~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|+..++ ..+|+|.+..... ..+.+.+|++++.++ +||||+++++++. .++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeC
Confidence 46899999999999996432 2588998875432 235688999999999 8999999999865 45578999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999997432 34899999999999999999999998 999999999999999999999999999765332
Q ss_pred --------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 533 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 533 --------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
....+++.|+|||.+.+..++.++||||||+++|||++ |.+||......+. . ......... .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~---~---~~~~~~~~~---~ 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---T---VYLLQGRRL---L 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH---H---HHHHTTCCC---C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH---H---HHHhcCCCC---C
Confidence 22335678999999999999999999999999999999 5666654433221 1 111111100 0
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
. .......+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 253 ~--------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 253 Q--------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp C--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred C--------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 01122357788889999999999999999999999987643
No 128
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.5e-38 Score=337.59 Aligned_cols=240 Identities=20% Similarity=0.316 Sum_probs=190.1
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcC-CCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||++...+++.||||++...... .+.+.+|++++.++.+ ||||+++++++..++..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4689999999999999888999999998755333 3568899999999954 6999999999999999999999 568
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 140 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 89999997532 4889999999999999999999998 99999999999995 589999999999876432
Q ss_pred ---CCCCCCCcccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcc
Q 005875 533 ---ATPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 598 (672)
Q Consensus 533 ---~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 598 (672)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .......+.....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNH 285 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHHCTTS
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHhCccc
Confidence 23458999999999865 3688999999999999999999999975321 1112222221111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 599 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 599 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.... ... ....+.+++.+||+.||++|||+.|++++
T Consensus 286 ~~~~-------~~~---~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 EIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCC-------Ccc---chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1000 001 12356778889999999999999999975
No 129
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.6e-38 Score=352.79 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=197.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 368999999999999975 58899999997542 2345678899999998 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 268 gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 268 GGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp SCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999997543 234899999999999999999999998 999999999999999999999999999776443
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 533 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....... +.... .. + .
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~-i~~~~-~~-~------p- 409 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERL-VKEVP-EE-Y------S- 409 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHH-HHHCC-CC-C------C-
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHH-hhccc-cc-C------C-
Confidence 235689999999999998999999999999999999999999986543221 1111111 11110 00 0 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 644 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 644 (672)
......+.+++.+||+.||++|| +++|++++
T Consensus 410 --~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 --ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11223566777899999999999 78999874
No 130
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=326.45 Aligned_cols=239 Identities=22% Similarity=0.419 Sum_probs=176.1
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+. .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCC
Confidence 46899999999999997 4688999999865421 236788899999988 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 95 NGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp TEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999997432 34899999999999999999999998 999999999999999999999999998765432
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+++.|+|||++.+..++.++||||||+++|||++|+.||......+... ...... . . ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~----~---~--~~ 232 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KVVLAD----Y---E--MP 232 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSC----C---C--CC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HHhhcc----c---C--Cc
Confidence 23457889999999999889999999999999999999999998654332211 000000 0 0 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 233 ---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 ---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1122356678889999999999999999873
No 131
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=332.47 Aligned_cols=256 Identities=21% Similarity=0.310 Sum_probs=191.8
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+... ++.||+|++...... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCC
Confidence 4689999999999999764 789999998765433 34577899999999 899999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 87 ~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 87 TVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp EHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred chHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999988643 24899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhH---------HHHHhhhhccccc
Q 005875 533 -ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR---------WVQSVVREEWTAE 601 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 601 (672)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||.+....+...... +........+...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 23457888999999976 668999999999999999999999998654322111000 0000000000000
Q ss_pred cchhhhhcccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 602 VFDVELMRFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 602 ~~d~~~~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
...+....... .......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000000 01223457788889999999999999999974
No 132
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=336.26 Aligned_cols=246 Identities=22% Similarity=0.367 Sum_probs=192.3
Q ss_pred hccccccCcEEEEEEEECC-CcE----EEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|++.. ++. |++|.+.... ...+.+.+|+.++.++ +||||+++++++..+. .++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC-ceEEEEe
Confidence 4689999999999999653 433 5777775432 2456789999999998 8999999999998754 7899999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 533 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 533 ~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
. ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+. ...........
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-------~~~~~~~~~~~---- 239 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-------SSILEKGERLP---- 239 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-------HHHHHTTCCCC----
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-------HHHHHcCCCCC----
Confidence 2 2234667999999999999999999999999999999 9999986543321 11111111000
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
........+.+++.+||+.||++|||++|+++.|+++...
T Consensus 240 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 ------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0111233567788899999999999999999999999743
No 133
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=332.16 Aligned_cols=241 Identities=21% Similarity=0.320 Sum_probs=188.7
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcCC-CceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQH-PNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||++...+++.||||++...... .+.+.+|++++..+.+| +||+++++++.+++..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 4689999999999999988999999998755433 25688899999999433 999999999999999999999 567
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 93 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 8999999753 34899999999999999999999998 99999999999997 6789999999998764322
Q ss_pred ----CCCCCCcccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcc
Q 005875 534 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 598 (672)
Q Consensus 534 ----~~~~~~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 598 (672)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNH 238 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTS
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHHhcCCc
Confidence 3458999999999864 6788999999999999999999999974321 1111222211111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005875 599 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 645 (672)
Q Consensus 599 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 645 (672)
.... . ......+.+++.+||+.||++|||+.|++++-
T Consensus 239 ~~~~-------~---~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 239 EIEF-------P---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCCC-------C---CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCC-------c---ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1100 0 01123567788899999999999999999853
No 134
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-38 Score=363.48 Aligned_cols=244 Identities=24% Similarity=0.350 Sum_probs=196.6
Q ss_pred ccccccCcEEEEEEEEC---CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 381 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
+.||+|+||+||+|.+. .++.||||+++..... .+++.+|++++.++ +|||||++++++. .+..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 47999999999999753 3578999999865433 46789999999999 8999999999986 456889999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 533 (672)
+|+|.++++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 453 ~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 453 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999999743 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhh
Q 005875 534 ------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 606 (672)
Q Consensus 534 ------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 606 (672)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ +...+........
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~~~---- 593 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMGC---- 593 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCCCC----
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCCCC----
Confidence 1224677999999999999999999999999999998 999998654322 1111111111110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 607 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 607 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.......+.+++.+||+.||++||+++++++.|+++...
T Consensus 594 ------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 594 ------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp ------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 112235677888899999999999999999999988643
No 135
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-38 Score=334.78 Aligned_cols=244 Identities=17% Similarity=0.288 Sum_probs=195.5
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
+.||+|+||+||+|... +++.||+|+++.... ....+.+|+.++..+.+||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 78999999999999976 578999999976543 34678899999999978899999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC---CCCeEEeecCCCCCCCCC-
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~~- 532 (672)
+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++......
T Consensus 115 ~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 115 EIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 9999986432 245899999999999999999999998 999999999999998 789999999999766443
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+...... ...
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~--~~~------ 254 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLNISQVNVD--YSE------ 254 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCC--CCT------
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHHHhcccc--cCc------
Confidence 23458899999999999999999999999999999999999997643221 11111111000 000
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.........+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 255 ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0011223456778889999999999999999874
No 136
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=345.61 Aligned_cols=243 Identities=16% Similarity=0.264 Sum_probs=192.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+++.. +++.||+|++++.. ...+.+.+|.+++..+ +||||+++++++.+++..|+||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 468999999999999975 58899999997532 1234588899999888 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 533 (672)
+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 145 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 145 GGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp SCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999997432 24899999999999999999999998 9999999999999999999999999997654322
Q ss_pred ----CCCCCCcccCccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccccc
Q 005875 534 ----TPSRSAGYRAPEVIE-------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 602 (672)
Q Consensus 534 ----~~~~~~~y~aPE~~~-------~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (672)
...||+.|+|||++. ...++.++|||||||++|||++|+.||.+....+ ....+.........
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~~ 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TYGKIVHYKEHLSL 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCC
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhcccCcCC
Confidence 346899999999997 4568999999999999999999999997643221 12222211100000
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 005875 603 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMR---PNMDEVVRM 644 (672)
Q Consensus 603 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~ 644 (672)
+.. ... ....+.+++.+||+ +|++| |+++|++++
T Consensus 292 --p~~--~~~---~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 --PLV--DEG---VPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --C------C---CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --Ccc--ccC---CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 000 011 22356677779999 99998 689999874
No 137
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.5e-38 Score=325.97 Aligned_cols=251 Identities=22% Similarity=0.340 Sum_probs=189.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.. +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 468999999999999975 4788999999755432 25678899999998 899999999999999999999999986
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
++.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 -~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 -DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp -EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred -CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 5655554322 34999999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh-------hcccccc-
Q 005875 533 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR-------EEWTAEV- 602 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~- 602 (672)
....+|+.|+|||++.+.. ++.++|||||||++|||++|..||..... .......+.. +.+....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-----HHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHHhCCCChhhhhhhcc
Confidence 2345788999999998766 79999999999999999998888643221 1111111111 0000000
Q ss_pred ---------chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 603 ---------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 603 ---------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.................+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000011223456678889999999999999999873
No 138
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=335.15 Aligned_cols=251 Identities=23% Similarity=0.372 Sum_probs=183.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEe--------CCeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--------KDEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--------~~~~~lV 449 (672)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|+.++.++.+||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 478999999999999975 578999998855432 345688999999999669999999999953 3347899
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||++ |+|.+++..... ...+++..+..++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||++...
T Consensus 113 ~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp EECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred EEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 99996 699998864221 234999999999999999999999975 45999999999999999999999999999776
Q ss_pred CCCC----------------CCCCCCcccCcccc---cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 005875 530 NVPA----------------TPSRSAGYRAPEVI---ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 590 (672)
Q Consensus 530 ~~~~----------------~~~~~~~y~aPE~~---~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~ 590 (672)
.... ...+++.|+|||++ .+..++.++|||||||++|||++|+.||.........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------ 262 (337)
T 3ll6_A 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV------ 262 (337)
T ss_dssp SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh------
Confidence 4321 23378889999998 5667889999999999999999999999754322211
Q ss_pred HHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 591 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 591 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
........ . ......+.+++.+||+.||++|||++|++++|+++.+....
T Consensus 263 ----~~~~~~~~-------~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 263 ----NGKYSIPP-------H---DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp -------CCCCT-------T---CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred ----cCcccCCc-------c---cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 00000000 0 01112356788899999999999999999999999876544
No 139
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.5e-39 Score=335.71 Aligned_cols=257 Identities=21% Similarity=0.367 Sum_probs=186.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 467999999999999965 578899999875432 346788999999999 89999999999999999999999998 5
Q ss_pred chhhhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 457 SLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 457 ~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
+|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99998864321 12235899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhh----cccc----cc
Q 005875 533 -ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTA----EV 602 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~----~~ 602 (672)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ......... .+.. ..
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL---KLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCTTTCGGGGGCTT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCChhHhhhhhhhhh
Confidence 23457889999999976 46899999999999999999999999865432211 111110000 0000 00
Q ss_pred chhhhh--cccCh---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 603 FDVELM--RFQNI---------EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 603 ~d~~~~--~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
+.+... ..... ......+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000 00000 0122457788889999999999999999874
No 140
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.1e-38 Score=332.93 Aligned_cols=256 Identities=21% Similarity=0.337 Sum_probs=192.5
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccC----hhhHHHHHHHHHHHcCCCceeceEEEEEeCCe----eEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----KLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----~~lV~ 450 (672)
.+.||+|+||+||+|+. .+++.||+|+++..... ...+.+|++++.++ +||||+++++++..... .++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEE
Confidence 46899999999999996 56788999999765332 23577888888888 89999999999876554 39999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++|+|.++++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 96 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999999743 24899999999999999999999998 9999999999999999999999999997654
Q ss_pred CCC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 531 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 531 ~~~-------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
... ...+++.|+|||++.+..++.++||||||+++|||++|+.||.+....+ ...........
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~---- 237 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPI---- 237 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCC----
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCC----
Confidence 321 2347889999999999999999999999999999999999997543211 11111111110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHHHHHHhhhcCCCCCCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMD-EVVRMIEEVRQSDSENRPS 658 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~L~~i~~~~~~~~~s 658 (672)
.+.. .... ....+.+++.+||+.||++||++. ++...+..+....+...+.
T Consensus 238 ~~~~-~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~ 289 (311)
T 3ork_A 238 PPSA-RHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289 (311)
T ss_dssp CHHH-HSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSCC
T ss_pred Cccc-ccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCCc
Confidence 0000 0111 224566788899999999999655 5555777666555443333
No 141
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-38 Score=327.17 Aligned_cols=246 Identities=24% Similarity=0.365 Sum_probs=195.9
Q ss_pred hccccccCcEEEEEEEECC----CcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|.+.+ +..||+|.+..... ..+.+.+|++++..+ +||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecC
Confidence 4689999999999998643 23599999876432 346788999999999 99999999999764 5678999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 533 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 533 (672)
++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 534 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 534 -----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+. . ... .......
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~---~---~~~-~~~~~~~------ 234 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV---I---GVL-EKGDRLP------ 234 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH---H---HHH-HHTCCCC------
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH---H---HHH-hcCCCCC------
Confidence 2335678999999998899999999999999999998 9999975443221 1 111 1110000
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 235 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 ----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0011224567788899999999999999999999998765
No 142
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.6e-38 Score=331.88 Aligned_cols=253 Identities=23% Similarity=0.397 Sum_probs=192.2
Q ss_pred hccccccCcEEEEEEEECC----CcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCe-----eE
Q 005875 380 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----KL 447 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~ 447 (672)
.+.||+|+||+||+|+... +..||+|+++..... .+.+.+|+.++.++ +||||+++++++.+.+. .+
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCcccE
Confidence 5689999999999998642 347999998755333 34688899999999 89999999999987653 49
Q ss_pred EEEEecCCCchhhhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCC
Q 005875 448 LVYDYFASGSLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 526 (672)
Q Consensus 448 lV~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 526 (672)
+||||+++|+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999853321 22345999999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 527 PLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 527 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
...... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||......+. ........ .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------~~~~~~~~-~ 267 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM------YDYLLHGH-R 267 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------HHHHHTTC-C
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH------HHHHHcCC-C
Confidence 765432 12335678999999999999999999999999999999 8999976543221 11111111 0
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.. ........+.+++.+||+.||++|||+.|++++|+++.+..+
T Consensus 268 ~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 268 LK----------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp CC----------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CC----------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 00 011223457788889999999999999999999999987654
No 143
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.6e-38 Score=324.05 Aligned_cols=251 Identities=20% Similarity=0.373 Sum_probs=200.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|+.. +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEe
Confidence 468999999999999976 588999999875432 256789999999999 89999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC----CeEEeecCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 527 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 527 (672)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999642 24899999999999999999999998 99999999999999887 89999999997
Q ss_pred CCCCCC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 528 LMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 528 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
...... ...+++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+...... ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~---~~ 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVNYD---FD 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTCCC---CC
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcccC---Cc
Confidence 654322 3457889999999999999999999999999999999999997643211 11111111100 00
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhhcCC
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSDS 653 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~~~~~ 653 (672)
... .. .....+.+++.+||+.||++|||+.|+++ .++++.....
T Consensus 232 ~~~--~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~ 277 (283)
T 3bhy_A 232 EEY--FS---NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNV 277 (283)
T ss_dssp HHH--HT---TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC
T ss_pred chh--cc---cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhh
Confidence 000 01 11245677888999999999999999998 5777765543
No 144
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.7e-38 Score=326.48 Aligned_cols=242 Identities=21% Similarity=0.383 Sum_probs=196.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe----------------
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS---------------- 442 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~---------------- 442 (672)
.+.||+|+||.||+|+.. +++.||+|++... .+.+.+|++++.++ +||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECC---SGGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEeccc---cHHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccC
Confidence 478999999999999986 6889999998653 35678899999999 99999999999864
Q ss_pred CCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEee
Q 005875 443 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 522 (672)
Q Consensus 443 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 522 (672)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECc
Confidence 345789999999999999997533 234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 523 FGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 523 fGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
||++...... ....+++.|+|||++.+..++.++||||||+++|||++|..|+... ....... .....
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~~-~~~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTDL-RDGII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHHH-HTTCC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHHh-hcccc
Confidence 9998765433 2345788999999999999999999999999999999999887421 0111111 11111
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.. . ....+.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 237 ~~----------~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 SD----------I---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CT----------T---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred cc----------c---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 11 1 12345678889999999999999999999999986654
No 145
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.7e-38 Score=328.57 Aligned_cols=242 Identities=21% Similarity=0.342 Sum_probs=196.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||.||+|+.. +++.||+|+++.... ..+.+.+|++++..+ +||||+++++++.+++..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEE
Confidence 578999999999999976 578899999875432 246789999999999 89999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC----CeEEeecCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 527 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 527 (672)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 96 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999742 34899999999999999999999998 99999999999999888 79999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 528 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 528 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
..... ....+++.|+|||++.+..++.++||||||+++|||++|..||.+....+ ....+..... .++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~---~~~ 238 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITSVSY---DFD 238 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCC---CCC
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhccc---ccC
Confidence 65443 23457889999999999999999999999999999999999997543211 1111111110 011
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
... .. .....+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~--~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEF--FS---HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHH--HT---TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhh--hc---ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 110 01 112356778889999999999999999873
No 146
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=8.4e-39 Score=336.26 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=197.9
Q ss_pred hccccccCcEEEEEEEE-----CCCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEE--eCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYY--SKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lV~e 451 (672)
.+.||+|+||+||+|++ .+++.||||++..... ..+.+.+|++++.++ +||||+++++++. +....++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEe
Confidence 46899999999999984 3578899999876532 245688999999999 9999999999987 4456889999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999997532 24899999999999999999999998 99999999999999999999999999976543
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC--------CCChhHHHHHhhhh
Q 005875 532 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD--------MVDLPRWVQSVVRE 596 (672)
Q Consensus 532 ~~-------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~--------~~~~~~~~~~~~~~ 596 (672)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||....... ..............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 2346777999999999889999999999999999999999986432110 00000011111111
Q ss_pred ccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 597 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 597 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.. ...........+.+++.+||+.||++|||++|++++|+.+.....
T Consensus 260 ~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 260 GQ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred cc----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 10 001112233567788889999999999999999999999976654
No 147
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.4e-38 Score=323.34 Aligned_cols=241 Identities=21% Similarity=0.325 Sum_probs=194.6
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|.... +..+|+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 4689999999999999765 5689999987653 3467899999999999 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe---cCCCCeEEeecCCCCCCCCC--
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~-- 532 (672)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 99988643 24899999999999999999999998 9999999999999 78899999999998765432
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 533 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
....+++.|+|||++.+. ++.++||||||+++|||++|+.||......+ ....+...... .... ...
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~--~~~~---~~~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE------VMLKIREGTFT--FPEK---DWL 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCC--CCHH---HHT
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCC--CCch---hhh
Confidence 244578899999998764 8999999999999999999999997643211 11111111110 0000 000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.....+.+++.+||+.||++|||+.|++++
T Consensus 233 ---~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 233 ---NVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 123456778889999999999999999973
No 148
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=334.82 Aligned_cols=261 Identities=19% Similarity=0.317 Sum_probs=192.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC--hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+.. +++.||+|++...... ...+.+|++++.++ +||||+++++++.+++..++||||++ |
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 468999999999999976 5788999998754322 22456788999988 89999999999999999999999998 5
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC---
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 533 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~--- 533 (672)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 85 DLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 9999887532 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhh----ccccccchhhh
Q 005875 534 -TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTAEVFDVEL 607 (672)
Q Consensus 534 -~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~ 607 (672)
...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. .......... .+.........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHhchhhhcchhh
Confidence 3356889999999876 5689999999999999999999999986543221 1111111110 00000000000
Q ss_pred h-------cccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhhcC
Q 005875 608 M-------RFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSD 652 (672)
Q Consensus 608 ~-------~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~~~~ 652 (672)
. .... .......+.+++.+||+.||++|||++|+++ .+..+.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 292 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTT
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccc
Confidence 0 0000 0112245678888999999999999999998 555554443
No 149
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.9e-38 Score=327.07 Aligned_cols=255 Identities=20% Similarity=0.363 Sum_probs=194.0
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+++..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 46899999999999996 4688999999875322 235678899999999 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 533 (672)
+|+|.+++..... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999864221 1334899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 534 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 534 ---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
...+++.|+|||++.+..++.++||||||+++|||++|+.||.+... ............... ... .
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~-~~~------~ 260 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYP-PLP------S 260 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHTTCSC-CCC------T
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhcccCC-CCc------c
Confidence 23578889999999999999999999999999999999999975432 111222221111111 000 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
......+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 261 ---~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 261 ---DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 1122356778889999999999999999999999987764
No 150
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.7e-38 Score=343.95 Aligned_cols=254 Identities=19% Similarity=0.245 Sum_probs=201.4
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||.||+|+. .+++.||||++.... ....+.+|++++..+.+|+++..+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 46899999999999996 458899999876543 34568899999999966678888888888888999999999 9999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe---cCCCCeEEeecCCCCCCCCCC--
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~~-- 533 (672)
.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99997432 24999999999999999999999998 9999999999999 688999999999997654322
Q ss_pred ---------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 534 ---------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 534 ---------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
...+++.|+|||++.+..++.++|||||||++|||++|+.||.+......... ...+...... ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~---~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK---YEKISEKKVA-TSIE 238 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH---HHHHHHHHHH-SCHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH---HHHHhhcccc-ccHH
Confidence 34578899999999999999999999999999999999999987554332111 1111111110 0000
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
. + .. .....+.+++.+||+.+|++||++++|++.|+++....
T Consensus 239 ~-l--~~---~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 239 A-L--CR---GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp H-H--HT---TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred H-H--hc---CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 0 0 01 11246778888999999999999999999999996543
No 151
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-38 Score=328.48 Aligned_cols=244 Identities=24% Similarity=0.346 Sum_probs=194.9
Q ss_pred cccccCcEEEEEEEEC---CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 382 VLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 382 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.||+|+||+||+|.+. .++.||||+++..... .+.+.+|++++..+ +||||+++++++ ..+..++||||+++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 7999999999999642 3578999999765332 45788999999999 899999999999 56778999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 102 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999999753 24899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 534 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 534 -----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ............
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~~------ 240 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMG------ 240 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCCC------
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCCCC------
Confidence 1234678999999998889999999999999999999 999997643221 111111111100
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
........+.+++.+||+.||++||++.|+++.|+++....
T Consensus 241 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 241 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 01122345777888999999999999999999999987654
No 152
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-37 Score=324.45 Aligned_cols=250 Identities=20% Similarity=0.308 Sum_probs=192.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC----hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++...... .+.+.+|+.++.++ +||||+++++++..++..++||||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 468999999999999975 5788999998765332 25678899999998 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 533 (672)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 118 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999743 24899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 534 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 534 ----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
...+++.|+|||++.+..++.++||||||+++|||++|+.||...... ........... .+. ..
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~----~~~-~~ 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIP----RPS-TV 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCC----CGG-GT
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCC----Ccc-cc
Confidence 335788999999999999999999999999999999999999754211 11111111110 000 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhhcCC
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 653 (672)
. ......+.+++.+||+.||++|| +++++++.|+++.....
T Consensus 258 ~---~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 258 R---PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp S---TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred C---CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 0 11223566788899999999999 99999999998876654
No 153
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.8e-39 Score=337.74 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=201.7
Q ss_pred hccccccCcEEEEEEEECC------CcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|.... ...||+|.+..... ..+.+.+|++++..+.+||||+++++++.+++..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 4789999999999999753 24799999876532 245688999999999789999999999999999999999
Q ss_pred ecCCCchhhhhccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEee
Q 005875 452 YFASGSLSTLLHGNRG---------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 522 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 522 (672)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECc
Confidence 9999999999964321 01234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhh
Q 005875 523 FGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 595 (672)
Q Consensus 523 fGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 595 (672)
||++....... ...+++.|+|||++.+..++.++||||||+++|||+| |..||.+....+ .......
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~ 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVK 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHH
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHh
Confidence 99997653322 2234668999999998899999999999999999999 999997643221 1111221
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 596 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 596 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
....... .......+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 282 ~~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 282 DGYQMAQ----------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCC----------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1111100 0111245677888999999999999999999999987643
No 154
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.5e-38 Score=345.14 Aligned_cols=194 Identities=23% Similarity=0.318 Sum_probs=169.2
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccChhhHHHHHHHHHHHc-----CCCceeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVG-----QHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|.... ++.||||++.......+.+.+|++++..+. +|+||+++++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 4689999999999998764 788999999765444567788888888774 5779999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC--eEEeecCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV 531 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~--~kl~DfGla~~~~~ 531 (672)
. ++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++.....
T Consensus 182 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 69999987543 234899999999999999999999998 999999999999999987 99999999976544
Q ss_pred C-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 005875 532 P-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 580 (672)
Q Consensus 532 ~-~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~ 580 (672)
. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 3 345688999999999999999999999999999999999999986543
No 155
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-38 Score=325.87 Aligned_cols=247 Identities=26% Similarity=0.422 Sum_probs=193.3
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeC-CeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||+||+++.. ++.||+|+++... ..+.+.+|++++.++ +||||+++++++.+. +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 478999999999999986 7899999987543 456788999999998 899999999997654 478999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-CCCC
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 537 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~ 537 (672)
.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...+
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence 99997432 123788999999999999999999998 9999999999999999999999999987654332 3346
Q ss_pred CCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHH
Q 005875 538 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 616 (672)
Q Consensus 538 ~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 616 (672)
++.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+ ....... .....
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~------~~~~-~~~~~~~----------~~~~~ 239 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV------VPRV-EKGYKMD----------APDGC 239 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH------HHHH-TTTCCCC----------CCTTC
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHH-hcCCCCC----------CcccC
Confidence 788999999998899999999999999999998 9999976432221 1111 1111100 01122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 617 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 617 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
...+.+++.+||+.||++|||+.|+++.|++++...
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 345677888999999999999999999999997653
No 156
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.2e-38 Score=346.26 Aligned_cols=238 Identities=23% Similarity=0.360 Sum_probs=196.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 468999999999999976 68899999997542 2245688999999988 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 100 gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 100 GGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp SEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999742 34899999999999999999999998 999999999999999999999999999766433
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....|++.|+|||++.+..+ +.++|||||||++|||++|+.||.+... ......+...... ..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDGIFY---------TP 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTTCCC---------CC
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCcC---------CC
Confidence 34568999999999988776 6899999999999999999999975432 1222222221110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 237 ~~---~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 QY---LNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TT---CCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cc---CCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 11 12346778889999999999999999983
No 157
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-38 Score=324.16 Aligned_cols=238 Identities=25% Similarity=0.384 Sum_probs=192.4
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|.... +..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCC
Confidence 4689999999999999764 5689999986542 2345688899999988 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 93 LGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 99999999743 24899999999999999999999998 999999999999999999999999988655432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 533 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
....+++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+...... .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~------------~ 226 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------TYKRISRVEFT------------F 226 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCC------------C
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH------HHHHHHhCCCC------------C
Confidence 23457889999999999999999999999999999999999997543211 11111111100 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.......+.+++.+||+.||++|||++|++++
T Consensus 227 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01122356678889999999999999999985
No 158
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-38 Score=326.37 Aligned_cols=243 Identities=22% Similarity=0.332 Sum_probs=190.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+++.. ++..+|+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 578999999999999975 578899999876542 457789999999999 9999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe---cCCCCeEEeecCCCCCCCCC-
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~- 532 (672)
+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99998854321 1234899999999999999999999998 9999999999999 45688999999999765432
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+++.|+|||++. ..++.++||||||+++|||++|+.||.+....+ .............. ..
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~~~------~~ 248 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE------VQQKATYKEPNYAV------EC 248 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCC--------
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH------HHhhhccCCccccc------cc
Confidence 2345788999999986 468899999999999999999999997643211 11111111110000 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 249 ~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Cc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01 1235667888999999999999999986
No 159
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=332.15 Aligned_cols=255 Identities=14% Similarity=0.168 Sum_probs=198.2
Q ss_pred hccccccCcEEEEEEEECC---------CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceec---------------
Q 005875 380 AEVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVP--------------- 435 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~--------------- 435 (672)
.+.||+|+||+||+|+... ++.||+|++... +.+.+|++++.++ +||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccCCccCccc
Confidence 4689999999999999764 788999998653 5788999999999 8999887
Q ss_pred eEEEEEe-CCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC
Q 005875 436 LRAYYYS-KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ 514 (672)
Q Consensus 436 l~~~~~~-~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~ 514 (672)
+++++.. ++..++||||+ +|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDP 194 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEET
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcC
Confidence 6778876 67889999999 999999998542 234999999999999999999999998 999999999999999
Q ss_pred CC--CeEEeecCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC
Q 005875 515 DL--DGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 581 (672)
Q Consensus 515 ~~--~~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~ 581 (672)
++ .+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 9999999999765321 2235788999999999999999999999999999999999999864321
Q ss_pred CCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 582 DMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
. ..+........ .. .....+... ..... ...+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 275 ~-~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 275 T-EDIMKQKQKFV-DK-PGPFVGPCG-HWIRP---SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp H-HHHHHHHHHHH-HS-CCCEECTTS-CEECC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHHhcc-CC-hhhhhhhcc-ccCCC---cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 1 01111111111 00 011111000 00111 2456777889999999999999999999999987653
No 160
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.1e-39 Score=344.13 Aligned_cols=253 Identities=13% Similarity=0.045 Sum_probs=180.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc----ChhhHHHHHHHHHHHc-CCCceeceE-------EEEEeCC--
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG-QHPNVVPLR-------AYYYSKD-- 444 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~-~h~niv~l~-------~~~~~~~-- 444 (672)
.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|++++..+. +||||++++ +++...+
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 468999999999999975 678899999987543 2345677877777764 599988755 5554432
Q ss_pred ---------------eeEEEEEecCCCchhhhhccCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCcccC
Q 005875 445 ---------------EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETR------VKILLGTARGVAHIHSMGGPKFTHG 503 (672)
Q Consensus 445 ---------------~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~gl~~LH~~~~~~ivHr 503 (672)
..++||||++ |+|.+++..... .+++..+ ..++.||+.||+|||+++ |+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccC
Confidence 3799999999 899999975321 2444555 678899999999999998 9999
Q ss_pred CCCCCCEEecCCCCeEEeecCCCCCCCCCC-CCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 005875 504 NIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 580 (672)
Q Consensus 504 DLk~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~ 580 (672)
||||+|||++.++.+||+|||+++...... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998765544 4456789999999987 6799999999999999999999999987643
Q ss_pred CCCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhh
Q 005875 581 DDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 649 (672)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~ 649 (672)
......... ........ ........ .....+.+++.+||+.||++|||++|+++ .++++.
T Consensus 299 ~~~~~~~~~---~~~~~~~~---~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 299 GIKGSWKRP---SLRVPGTD---SLAFGSCT---PLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TCTTCCCBC---CTTSCCCC---SCCCTTSS---CCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred ccccchhhh---hhhhcccc---ccchhhcc---CCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 321110000 00000000 00000111 22345677888999999999999999986 444443
No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.7e-38 Score=319.49 Aligned_cols=241 Identities=22% Similarity=0.363 Sum_probs=193.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|+.++..+ +||||+++++++.+++..++||||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 468999999999999976 578999999875432 246788999999988 9999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 531 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 531 (672)
+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999999742 34899999999999999999999998 99999999999999999999999999875432
Q ss_pred -CCCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 532 -PATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
.....+++.|+|||++.+..+ +.++||||||+++|||++|+.||........ ....+. ..... ..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~----~~~~~---~~----- 229 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK----EKKTY---LN----- 229 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHH----TTCTT---ST-----
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhh----hcccc---cC-----
Confidence 233457889999999987765 7789999999999999999999986543211 111111 10000 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
........+.+++.+||+.||++|||++|++++
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 001122356678889999999999999999873
No 162
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.9e-38 Score=337.85 Aligned_cols=258 Identities=17% Similarity=0.255 Sum_probs=197.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHc-------CCCceeceEEEEE----eCCeeE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG-------QHPNVVPLRAYYY----SKDEKL 447 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~-------~h~niv~l~~~~~----~~~~~~ 447 (672)
.+.||+|+||+||+|+.. +++.||+|+++......+.+.+|++++..+. +|+||+++++++. +....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 468999999999999965 5778999999765444567889999999884 2889999999998 456789
Q ss_pred EEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCCCCCEEecCCC----------
Q 005875 448 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDL---------- 516 (672)
Q Consensus 448 lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~---------- 516 (672)
+||||+ +|++.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 999999 556666654332 23489999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCcc
Q 005875 517 ---------------------------------------DGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKS 556 (672)
Q Consensus 517 ---------------------------------------~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~ 556 (672)
.+||+|||++...... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 7999999999765433 344689999999999999999999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh---h---------ccccccch------------------hh
Q 005875 557 DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---E---------EWTAEVFD------------------VE 606 (672)
Q Consensus 557 DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d------------------~~ 606 (672)
|||||||++|||++|+.||......+...-......+.. . .+....+. ..
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999987655443221111111110 0 00000000 00
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 607 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 607 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
........+....+.+|+.+||+.||++|||++|++++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 01112235566788999999999999999999999864
No 163
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.4e-38 Score=321.49 Aligned_cols=242 Identities=21% Similarity=0.332 Sum_probs=195.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 468999999999999975 4788999999765433 34577899999999 899999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC---eEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~~~~~~ 532 (672)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 90 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 90 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999888643 34899999999999999999999998 999999999999987665 999999999765443
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 533 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 533 ~---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
. ...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .............. .+ .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~--~~---~ 230 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYAQIKAGAYDYP--SP---E 230 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCC--TT---T
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------HHHHHHHhccccCC--ch---h
Confidence 3 345788999999999999999999999999999999999999754321 11111111111100 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. .....+.+++.+||+.||++|||++|++++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 WD---TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TT---TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hc---ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 122356678889999999999999999984
No 164
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-38 Score=335.19 Aligned_cols=244 Identities=21% Similarity=0.339 Sum_probs=194.4
Q ss_pred hccccccCcEEEEEEEE----CCCcEEEEEEecccc-----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 450 (672)
.+.||+|+||+||+++. .+++.||||+++... ...+.+.+|++++..+.+||||+++++++..++..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 47899999999999997 368899999987542 234567789999999978999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999743 24899999999999999999999998 9999999999999999999999999987543
Q ss_pred CC-----CCCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 531 VP-----ATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 531 ~~-----~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~---- 284 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSEPP---- 284 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCCCC----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccCCC----
Confidence 21 22357899999999985 3478999999999999999999999986543321 11222222111100
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRMI 645 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L 645 (672)
........+.+++.+||+.||++|| +++|++++.
T Consensus 285 --------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 285 --------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp --------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred --------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0111223566788899999999999 999998854
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.8e-38 Score=322.23 Aligned_cols=241 Identities=21% Similarity=0.323 Sum_probs=193.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|... +++.||+|+++.... ....+.+|+..+..+.+||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 468999999999999976 688999999876432 2456778888888887899999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC-------------------C
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-------------------L 516 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-------------------~ 516 (672)
|+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.+ .
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999975321 1234899999999999999999999998 9999999999999844 4
Q ss_pred CeEEeecCCCCCCCCCCCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh
Q 005875 517 DGCISDFGLTPLMNVPATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR 595 (672)
Q Consensus 517 ~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 595 (672)
.+||+|||.+..........+++.|+|||++.+. .++.++|||||||++|||++|.+++.... . ...+.
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~-~~~~~- 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------Q-WHEIR- 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------H-HHHHH-
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------H-HHHHH-
Confidence 7999999999888777777799999999999876 56689999999999999999998764321 0 11111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 596 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 596 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
....... .. .....+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~-------~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGRLPRI-------PQ---VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCCC-------SS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCCCCCC-------Cc---ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111000 01 112356778889999999999999999874
No 166
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.1e-38 Score=347.95 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=196.7
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
+.||+|+||+||+|+.. +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..|+||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 56999999999999975 58899999997543 2345688899999998 999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
|+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 999999975432 2345999999999999999999999998 9999999999999999999999999997654332
Q ss_pred --CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 534 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 534 --~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ........+...... ...
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~~~---------~p~ 414 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQAVT---------YPD 414 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCCCC---------CCT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhcccC---------CCc
Confidence 3468999999999999999999999999999999999999998654221 112222222211110 001
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 643 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 643 (672)
.....+.+++.+||+.||++||++ +|+++
T Consensus 415 ---~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 ---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ---ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 122355677789999999999975 66765
No 167
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.5e-38 Score=344.87 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=186.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeC------CeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lV 449 (672)
.+.||+|+||+||+|... +++.||||++...... .+.+.+|+.++..+ +||||+++++++... ...|+|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEE
Confidence 468999999999999965 4788999999765332 35677899999998 999999999999654 356999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 999986 56666642 2889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCC-h--------hHH-------H
Q 005875 530 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD-L--------PRW-------V 590 (672)
Q Consensus 530 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~-~--------~~~-------~ 590 (672)
... ....+|+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+... + ..+ .
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 543 23468999999999999999999999999999999999999998654221100 0 000 0
Q ss_pred HHhhhhccc-ccc-----chhhhhcc--cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 591 QSVVREEWT-AEV-----FDVELMRF--QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 591 ~~~~~~~~~-~~~-----~d~~~~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......... ... +....... .........+.+|+.+||+.||++|||++|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 000 00000000 0011224567889999999999999999999984
No 168
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=330.49 Aligned_cols=255 Identities=20% Similarity=0.362 Sum_probs=196.0
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEe----CCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~ 453 (672)
.+.||+|+||.||+++. .+++.||+|++.... ...+.+.+|++++..+ +||||+++++++.. ....++||||+
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 46899999999999997 568899999886532 2346788999999998 99999999999873 34778999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 533 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 533 (672)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999975322 1345899999999999999999999998 9999999999999999999999999986543211
Q ss_pred -------------CCCCCCcccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhc
Q 005875 534 -------------TPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE 597 (672)
Q Consensus 534 -------------~~~~~~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 597 (672)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||........ ..... ....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~----~~~~ 263 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVALA----VQNQ 263 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHHH----HHCC
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhHH----hhcc
Confidence 123588899999997654 68899999999999999999999963211110 11000 0000
Q ss_pred cccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005875 598 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 654 (672)
Q Consensus 598 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 654 (672)
.. ..........+.+++.+||+.||++|||++|++++|+.+....+.
T Consensus 264 ~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 264 LS----------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred CC----------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 00 000011234577788899999999999999999999998765543
No 169
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.7e-38 Score=337.83 Aligned_cols=234 Identities=21% Similarity=0.275 Sum_probs=182.2
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccC----hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+... ++.||+|++++.... ...+..|..++.+..+||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 4789999999999999764 678999999765432 23345555553333389999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 123 GGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 99999999743 24889999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.+.... .....+...... ..
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~~~---------~~ 259 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNILNKPLQ---------LK 259 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHHHHHHSCCC---------CC
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHhcccC---------CC
Confidence 23456899999999999999999999999999999999999999754321 122222221110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMD 639 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 639 (672)
... ...+.+++.+||+.||++||++.
T Consensus 260 ~~~---~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 260 PNI---TNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp SSS---CHHHHHHHHHHTCSSGGGSTTTT
T ss_pred CCC---CHHHHHHHHHHcccCHHhCCCCC
Confidence 112 23456777899999999999985
No 170
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=331.13 Aligned_cols=232 Identities=22% Similarity=0.311 Sum_probs=192.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 449 (672)
.+.||+|+||+||+|+.. +++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEE
Confidence 468999999999999964 578899999976532 234677899999999 999999999999999999999
Q ss_pred EEecCCC-chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCC
Q 005875 450 YDYFASG-SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 528 (672)
Q Consensus 450 ~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~ 528 (672)
|||+.+| +|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 108 ~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999777 999999743 24899999999999999999999998 99999999999999999999999999976
Q ss_pred CCCCC---CCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccch
Q 005875 529 MNVPA---TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 604 (672)
Q Consensus 529 ~~~~~---~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (672)
..... ...+|+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .. ...
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------------~~-----~~~ 242 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV------------EA-----AIH 242 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT------------TT-----CCC
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH------------hh-----ccC
Confidence 65433 2357899999999988877 788999999999999999999997422100 00 000
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 605 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 605 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.... ....+.+++.+||+.||++|||++|++++
T Consensus 243 ----~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 ----PPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----CCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011 12346778889999999999999999985
No 171
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.8e-39 Score=348.34 Aligned_cols=244 Identities=13% Similarity=0.166 Sum_probs=185.4
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEeccccc----ChhhHHHHHHHHHHHc--CCCceeceE-------EEEEeCCe
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG--QHPNVVPLR-------AYYYSKDE 445 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~--~h~niv~l~-------~~~~~~~~ 445 (672)
.+.||+|+||+||+|+. .+++.||||++..... ..+.+.+|++++..+. +|||||+++ +++.+.+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46899999999999996 4588999999974322 2356888986555443 799999998 77765542
Q ss_pred -----------------eEEEEEecCCCchhhhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCC
Q 005875 446 -----------------KLLVYDYFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 506 (672)
Q Consensus 446 -----------------~~lV~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk 506 (672)
.++||||+ +|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 78999999 67999999753211 1122446888899999999999999998 9999999
Q ss_pred CCCEEecCCCCeEEeecCCCCCCCCCC-CCCCCCcccCcccccCC-----------CCCCccchhhHHHHHHHHHhCCCC
Q 005875 507 ASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIETR-----------KHSHKSDVYSFGVLLLEMLTGKAP 574 (672)
Q Consensus 507 ~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~~~~-----------~~~~~~DvwS~Gvvl~el~tg~~p 574 (672)
|+|||++.++.+||+|||+++...... ...| +.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998654332 3446 899999999887 899999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhh
Q 005875 575 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQ 650 (672)
Q Consensus 575 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~~ 650 (672)
|.+....+..... . ...... ...+.+++.+||+.||++|||+.|+++ .++++.+
T Consensus 313 f~~~~~~~~~~~~---------------~----~~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 313 ITKDAALGGSEWI---------------F----RSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp C------CCSGGG---------------G----SSCCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred Ccccccccchhhh---------------h----hhccCC---CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence 9765433321100 0 000111 235667888999999999999999997 4555543
No 172
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.7e-38 Score=332.88 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=192.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc------cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeC
Confidence 578999999999999975 56789999986542 2235788999999999 899999999999999999999999
Q ss_pred cCCCchhhhhccCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 005875 453 FASGSLSTLLHGNRGA-----------------------------------GRTPLDWETRVKILLGTARGVAHIHSMGG 497 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~ 497 (672)
+++|+|.+++...... ....+++..+..++.||+.||+|||+.+
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~- 188 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG- 188 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-
Confidence 9999999998521110 0112456778899999999999999998
Q ss_pred CCcccCCCCCCCEEecCCC--CeEEeecCCCCCCCC--------CCCCCCCCcccCcccccC--CCCCCccchhhHHHHH
Q 005875 498 PKFTHGNIKASNVLINQDL--DGCISDFGLTPLMNV--------PATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLL 565 (672)
Q Consensus 498 ~~ivHrDLk~~NILl~~~~--~~kl~DfGla~~~~~--------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvvl 565 (672)
|+||||||+||+++.++ .+||+|||++..... .....+++.|+|||++.+ ..++.++|||||||++
T Consensus 189 --ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 189 --ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp --EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred --ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 99999999999998776 899999999975422 123457889999999975 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--
Q 005875 566 LEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR-- 643 (672)
Q Consensus 566 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~-- 643 (672)
|||++|+.||.+....+ ............. .+ .. ......+.+++.+||+.||++|||+.|+++
T Consensus 267 ~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~--~~---~~---~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp 332 (345)
T 3hko_A 267 HLLLMGAVPFPGVNDAD------TISQVLNKKLCFE--NP---NY---NVLSPLARDLLSNLLNRNVDERFDAMRALQHP 332 (345)
T ss_dssp HHHHHSSCSSCCSSHHH------HHHHHHHCCCCTT--SG---GG---GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSH
T ss_pred HHHHHCCCCCCCCChHH------HHHHHHhcccccC--Cc---cc---ccCCHHHHHHHHHHcCCChhHCCCHHHHhcCh
Confidence 99999999997543221 1122221111100 00 00 112345677888999999999999999998
Q ss_pred HHHHh
Q 005875 644 MIEEV 648 (672)
Q Consensus 644 ~L~~i 648 (672)
.++++
T Consensus 333 ~~~~~ 337 (345)
T 3hko_A 333 WISQF 337 (345)
T ss_dssp HHHTT
T ss_pred hhccC
Confidence 34443
No 173
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.7e-38 Score=329.73 Aligned_cols=254 Identities=19% Similarity=0.294 Sum_probs=196.8
Q ss_pred hccccccCcEEEEEEEE--CCCcEEEEEEecccccChhhHHHHHHHHHHHcCC------CceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL--EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH------PNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h------~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|.. .+++.||+|+++......+.+.+|++++..+ +| ++++++++++.+.+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46899999999999986 3578899999976544456788899998887 44 459999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC-----------------
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ----------------- 514 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~----------------- 514 (672)
|+ +++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999997543 235899999999999999999999998 999999999999987
Q ss_pred --CCCeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 005875 515 --DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 591 (672)
Q Consensus 515 --~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 591 (672)
++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+... ...
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA---MME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH---HHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH---HHH
Confidence 678999999999765443 34468899999999999999999999999999999999999998654322111 111
Q ss_pred Hhhhh---c-----cccccc---------------------hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005875 592 SVVRE---E-----WTAEVF---------------------DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 642 (672)
Q Consensus 592 ~~~~~---~-----~~~~~~---------------------d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 642 (672)
..... . .....+ .+..............+.+++.+||+.||++|||++|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 11000 0 000000 000000111234456788999999999999999999998
Q ss_pred HH
Q 005875 643 RM 644 (672)
Q Consensus 643 ~~ 644 (672)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 74
No 174
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.4e-38 Score=346.16 Aligned_cols=237 Identities=20% Similarity=0.277 Sum_probs=187.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+|+.. +++.||+|+++.... ....+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 478999999999999965 578999999975421 234566788888887 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~-~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~-- 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 232 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 232 GGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp SCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 99999999743 248999999999999999999998 77 99999999999999999999999999976432
Q ss_pred --CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 532 --PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 532 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+...... .
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~~~---------~ 368 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELILMEEIR---------F 368 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------C
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHHHHHHhCCCC---------C
Confidence 23456899999999999999999999999999999999999999754321 112222211110 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVR 643 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 643 (672)
. ......+.+++.+||+.||++|| +++|+++
T Consensus 369 p---~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 P---RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C---ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0 11123567788899999999999 9999987
No 175
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.8e-37 Score=337.37 Aligned_cols=242 Identities=21% Similarity=0.332 Sum_probs=184.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 449 (672)
.+.||+|+||+||+|... +++.||+|++..... ....+.+|++++.++ +||||+++++++. .+..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE-SSEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCceEEE
Confidence 468999999999999975 468999999875421 123588999999999 9999999999975 4568999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC---CeEEeecCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 526 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla 526 (672)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 9999999999998643 34899999999999999999999998 99999999999997544 5999999999
Q ss_pred CCCCCCC---CCCCCCcccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccc
Q 005875 527 PLMNVPA---TPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 600 (672)
Q Consensus 527 ~~~~~~~---~~~~~~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (672)
+...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||........ +.... ......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~i----~~~~~~ 363 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQI----TSGKYN 363 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHHH----HTTCCC
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHHH----hcCCCC
Confidence 8765432 3457899999999853 5678899999999999999999999976433221 11111 111000
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 601 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 601 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. .+. .. ......+.+++.+||+.||++|||++|++++
T Consensus 364 -~-~~~--~~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 -F-IPE--VW---AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -C-CHH--HH---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -C-Cch--hh---cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0 000 00 1123456778889999999999999999874
No 176
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.6e-38 Score=319.70 Aligned_cols=237 Identities=23% Similarity=0.337 Sum_probs=173.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCeEEEEehhc-
Confidence 367999999999999964 578999999875432 245788999999998 8999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 96 ~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 67888887643 34899999999999999999999998 999999999999999999999999999765433
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+++.|+|||++.+..+ +.++||||||+++|||++|+.||..... ......+......
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~----------- 230 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKNISNGVYT----------- 230 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC-----------
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC-----------
Confidence 23457889999999988765 6899999999999999999999975431 1111111111110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
........+.+++.+||+.||++|||++|++++
T Consensus 231 -~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 -LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 001122346778889999999999999999873
No 177
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.4e-37 Score=324.19 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=191.7
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe--CCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+. .+++.||+|+++.. ..+.+.+|++++.++.+||||+++++++.+ ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 46899999999999986 46789999998743 357789999999999669999999999988 56789999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC-CeEEeecCCCCCCCCC---
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~-~~kl~DfGla~~~~~~--- 532 (672)
+|.++++. +++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 99999852 889999999999999999999998 99999999999999777 8999999999765432
Q ss_pred CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccccc-------ch
Q 005875 533 ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV-------FD 604 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d 604 (672)
....+++.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+..... ........+. .+
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAK-VLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHH-HHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHH-hcCCchhhhHHHHhccccc
Confidence 23457888999999977 678999999999999999999999996432210 00000000 0000000000 00
Q ss_pred hh---------------hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 605 VE---------------LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 605 ~~---------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
+. .............+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00000111123567788889999999999999999873
No 178
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-38 Score=336.35 Aligned_cols=251 Identities=20% Similarity=0.347 Sum_probs=188.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCC------eeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lV 449 (672)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|++++..+ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEE
Confidence 467999999999999974 5889999998654332 35678899999999 8999999999997653 45999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp EECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 9999 7899999974 23899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhc------cccc
Q 005875 530 NVP-ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE------WTAE 601 (672)
Q Consensus 530 ~~~-~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~ 601 (672)
... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. ...+.... ....
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ------LKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHHHCCCCHHHHHT
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHHhcCCCCHHHHHH
Confidence 543 23467899999999977 6799999999999999999999999986542211 11111000 0000
Q ss_pred c---------------chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 005875 602 V---------------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 649 (672)
Q Consensus 602 ~---------------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~ 649 (672)
+ ....+. .........+.+++.+||+.||++|||++|++++ ++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFA--SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGG--GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhHHHHHHHHhCCCCCCCCHH--HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0 000000 0011223456778889999999999999999984 54443
No 179
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.4e-38 Score=331.99 Aligned_cols=253 Identities=21% Similarity=0.272 Sum_probs=190.9
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeC--------CeeE
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------DEKL 447 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------~~~~ 447 (672)
.+.||+|+||+||+|+. .+++.||+|++..... ....+.+|++++..+ +||||+++++++... +..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEE
Confidence 46899999999999997 4678999999865432 234678999999999 899999999999873 4689
Q ss_pred EEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 448 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 448 lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
+||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 101 lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 99999986 7777776432 24899999999999999999999998 9999999999999999999999999987
Q ss_pred CCCC--------CCCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhh--
Q 005875 528 LMNV--------PATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE-- 596 (672)
Q Consensus 528 ~~~~--------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-- 596 (672)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+... ........
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~i~~~~~~~~ 249 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA---LISQLCGSIT 249 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHHhCCCC
Confidence 5432 123346888999999876 457999999999999999999999998654322111 11111000
Q ss_pred -ccccccchh--------hhhcccChHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 597 -EWTAEVFDV--------ELMRFQNIEEE------MVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 597 -~~~~~~~d~--------~~~~~~~~~~~------~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......... .........+. ...+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000 00001111111 2347789999999999999999999985
No 180
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.1e-38 Score=345.42 Aligned_cols=189 Identities=27% Similarity=0.417 Sum_probs=149.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeC-----CeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~ 450 (672)
.+.||+|+||+||+|+.. +++.||||++...... .+.+.+|++++..+ +||||+++++++... ...|+||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEE
Confidence 468999999999999965 5789999999764332 35688899999999 999999999999543 5689999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+. |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9984 6999998742 34999999999999999999999998 9999999999999999999999999997654
Q ss_pred CC-------------------------------CCCCCCCcccCcccc-cCCCCCCccchhhHHHHHHHHHh--------
Q 005875 531 VP-------------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLT-------- 570 (672)
Q Consensus 531 ~~-------------------------------~~~~~~~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~el~t-------- 570 (672)
.. ....+|+.|+|||++ .+..++.++|||||||++|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 21 123468889999986 56679999999999999999999
Q ss_pred ---CCCCCCCC
Q 005875 571 ---GKAPLQSP 578 (672)
Q Consensus 571 ---g~~pf~~~ 578 (672)
|+++|.+.
T Consensus 288 ~~~~~p~f~g~ 298 (458)
T 3rp9_A 288 HADRGPLFPGS 298 (458)
T ss_dssp GGGCCCSCC--
T ss_pred cccccccCCCC
Confidence 66666554
No 181
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.5e-37 Score=330.18 Aligned_cols=242 Identities=19% Similarity=0.362 Sum_probs=193.8
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEecccccC---------hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEE
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 450 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 450 (672)
+.||+|+||.||+|... +++.||||++...... .+.+.+|+.++.++.+||||+++++++......++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 78999999999999986 6889999998654321 2457789999999878999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+||+++.++.+||+|||++....
T Consensus 180 e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 180 DLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 999999999999742 24899999999999999999999998 9999999999999999999999999987654
Q ss_pred CC---CCCCCCCcccCcccccC------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccc
Q 005875 531 VP---ATPSRSAGYRAPEVIET------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAE 601 (672)
Q Consensus 531 ~~---~~~~~~~~y~aPE~~~~------~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (672)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+.......
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------~~~~~i~~~~~~~- 324 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI------LMLRMIMEGQYQF- 324 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCC-
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCCC-
Confidence 32 23468899999999863 35888999999999999999999999754211 1111111111100
Q ss_pred cchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 602 VFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 602 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
..+. .. .....+.+++.+||+.||++|||++|++++
T Consensus 325 -~~~~---~~---~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 325 -SSPE---WD---DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -CHHH---HS---SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCcc---cc---cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 01 112356778889999999999999999873
No 182
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.9e-37 Score=326.49 Aligned_cols=256 Identities=23% Similarity=0.347 Sum_probs=191.8
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+... ++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 4689999999999999764 788999998655433 34577899999999 899999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 109 TILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp EHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred chHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9999887632 24899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCC-hh-------HHHHHhhhhc-cccc
Q 005875 533 -ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD-LP-------RWVQSVVREE-WTAE 601 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~-~~-------~~~~~~~~~~-~~~~ 601 (672)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||.+....+... +. .......... ....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 234578899999999875 68999999999999999999999998654322100 00 0000000000 0000
Q ss_pred cchhhhhcccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 602 VFDVELMRFQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 602 ~~d~~~~~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
...+........ ......+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000000 1123567788889999999999999999873
No 183
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5e-38 Score=329.40 Aligned_cols=251 Identities=23% Similarity=0.378 Sum_probs=199.8
Q ss_pred hccccccCcEEEEEEEEC------CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|... .++.||+|++..... ....+.+|++++..+ +||||+++++++.+++..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence 468999999999999864 367899999875432 234688899999998 89999999999999999999999
Q ss_pred ecCCCchhhhhccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCC
Q 005875 452 YFASGSLSTLLHGNRG-----AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 526 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 526 (672)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999974321 11234789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 527 PLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 527 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
....... ...+++.|+|||++.+..++.++||||||+++|||++ |..||...... .....+......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~~~~~ 259 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLL 259 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------HHHHHHHTTCCC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------HHHHHHHcCCcC
Confidence 7653221 2234678999999998899999999999999999999 89999754321 111111111110
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
. ........+.+++.+||+.||++|||+.|++++|+++...
T Consensus 260 -~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 260 -D----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp -C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred -C----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 0 0112234567788899999999999999999999988543
No 184
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=336.77 Aligned_cols=195 Identities=22% Similarity=0.406 Sum_probs=153.4
Q ss_pred hccccccCcEEEEEEEEC---CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe--CCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lV~e~~~ 454 (672)
+++||+|+||+||+|+.. +++.||+|++..... ...+.+|++++.++ +||||+++++++.. +...++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999976 467899999975432 45688999999999 89999999999965 568899999997
Q ss_pred CCchhhhhccCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe----cCCCCeEEeecCCC
Q 005875 455 SGSLSTLLHGNRG----AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLT 526 (672)
Q Consensus 455 ~g~L~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl----~~~~~~kl~DfGla 526 (672)
+ +|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5 88887753211 11234899999999999999999999998 9999999999999 77899999999999
Q ss_pred CCCCCC-------CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 005875 527 PLMNVP-------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 580 (672)
Q Consensus 527 ~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~ 580 (672)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+...
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 241 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence 865432 234578999999999874 589999999999999999999999986543
No 185
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.5e-37 Score=317.11 Aligned_cols=238 Identities=22% Similarity=0.325 Sum_probs=194.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 468999999999999976 46789999986532 2346788999999999 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC--C
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--P 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--~ 532 (672)
+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..... .
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 98 RGELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999997432 4899999999999999999999998 99999999999999999999999999865543 2
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 533 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+...... ...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~---------~~~- 233 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT------ETHRRIVNVDLK---------FPP- 233 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCCC---------CCT-
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh------HHHHHHhccccC---------CCC-
Confidence 3445788999999999999999999999999999999999999754321 111111111100 001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.....+.+++.+||+.||++|||++|++++
T Consensus 234 --~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 234 --FLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --cCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 112356678889999999999999999983
No 186
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.6e-37 Score=329.66 Aligned_cols=258 Identities=19% Similarity=0.280 Sum_probs=194.3
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHc----------CCCceeceEEEEEeCC----
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----------QHPNVVPLRAYYYSKD---- 444 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----------~h~niv~l~~~~~~~~---- 444 (672)
.+.||+|+||+||+|+. .+++.||||++.......+.+.+|++++.++. .|+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 46899999999999996 45788999999765445567888999988873 2899999999998654
Q ss_pred eeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCCCCCEEec------CCCC
Q 005875 445 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLIN------QDLD 517 (672)
Q Consensus 445 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~------~~~~ 517 (672)
..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++ ..+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcce
Confidence 688999999 889999997543 23489999999999999999999998 8 99999999999994 4457
Q ss_pred eEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh-
Q 005875 518 GCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR- 595 (672)
Q Consensus 518 ~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~- 595 (672)
+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.................+..
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999766543 344688999999999999999999999999999999999999986543322211111111110
Q ss_pred --hc---------cc----------ccc--------chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 596 --EE---------WT----------AEV--------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 596 --~~---------~~----------~~~--------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. +. ..+ .+...............+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 00 00 000 000001112234566788899999999999999999999983
No 187
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=326.74 Aligned_cols=243 Identities=23% Similarity=0.385 Sum_probs=190.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe------CCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lV~e~ 452 (672)
.+.||+|+||.||+|+.. +++.||+|++.......+.+.+|+.++.++.+||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 468999999999999974 678999999976666677899999999999789999999999987 4678999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999997543 234899999999999999999999998 999999999999999999999999998765432
Q ss_pred ----CCCCCCCcccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 533 ----ATPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 533 ----~~~~~~~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
....+++.|+|||++. +..++.++|||||||++|||++|..||...... .......... .....
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~ 255 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFLIPRNP-APRLK 255 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCCS
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhhcCc-cccCC
Confidence 2345788999999997 566889999999999999999999999754321 1111111111 00000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
... ....+.+++.+||+.||++||+++|++++
T Consensus 256 ------~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 256 ------SKK---WSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ------CSC---SCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ------ccc---cCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 011 12356778889999999999999999883
No 188
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.1e-37 Score=322.03 Aligned_cols=242 Identities=21% Similarity=0.352 Sum_probs=193.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+++.. +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 578999999999999975 588999999976532 345688999999999 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe---cCCCCeEEeecCCCCCCCCCC-
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~~- 533 (672)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 93 L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 99998643 24899999999999999999999998 9999999999999 788999999999987654322
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 534 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 534 -~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+...... +... ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~---~~~~--~~-- 231 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES------KLFEKIKEGYYE---FESP--FW-- 231 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHCCCC---CCTT--TT--
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCC---CCcc--cc--
Confidence 123788999999999999999999999999999999999999754321 111111111110 0000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 232 -~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 232 -DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1122456778889999999999999999984
No 189
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=328.79 Aligned_cols=254 Identities=24% Similarity=0.401 Sum_probs=197.7
Q ss_pred hccccccCcEEEEEEEE-----CCCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCC--eeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e 451 (672)
.+.||+|+||.||+|++ .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+ ..++|||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEE
Confidence 46899999999999984 3578899999876432 245788999999999 8999999999987654 6799999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999997543 34899999999999999999999998 99999999999999999999999999976543
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC--------CCCCC-hhHHHHHhhh
Q 005875 532 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVD-LPRWVQSVVR 595 (672)
Q Consensus 532 ~~-------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~--------~~~~~-~~~~~~~~~~ 595 (672)
.. ...++..|+|||++.+..++.++||||||+++|||+||..||..... ..... ..........
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 22 23356679999999988899999999999999999999999863210 00000 0000001111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 596 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 596 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
.... ..........+.+++.+||+.||++|||+.|+++.|+++++.
T Consensus 278 ~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 278 NNGR----------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1000 001112234677888899999999999999999999998764
No 190
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.3e-37 Score=316.74 Aligned_cols=242 Identities=24% Similarity=0.385 Sum_probs=190.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEe----CCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e 451 (672)
.+.||+|+||+||+|... ++..||+|++...... .+.+.+|++++..+ +||||+++++++.. +...++|||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEE
Confidence 357999999999999975 4678999998765433 34678899999998 89999999999875 345799999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec-CCCCeEEeecCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMN 530 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla~~~~ 530 (672)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++ +++.+||+|||++....
T Consensus 110 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred ecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999743 34899999999999999999999975 4599999999999998 78999999999997654
Q ss_pred CCC--CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 531 VPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 531 ~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
... ...+++.|+|||++.+ .++.++||||||+++|||++|+.||...... ........ .......++
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~-~~~~~~~~~---- 252 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIYRRVT-SGVKPASFD---- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHHHHHT-TTCCCGGGG----
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-----HHHHHHHh-ccCCccccC----
Confidence 332 3457889999998874 5899999999999999999999999753321 11111111 111111111
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 253 -----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 253 -----KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0112356788889999999999999999874
No 191
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-38 Score=331.06 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=190.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC------hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
.+.||+|+||+||+|+.. +++.||+|++...... .+.+.+|++++..+ +||||+++++++.+.+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEc
Confidence 468999999999999975 4789999998753221 24678899999999 899999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 532 (672)
+++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 94 MET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 986 8988886432 34888999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhh---hhccccccch
Q 005875 533 ----ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV---REEWTAEVFD 604 (672)
Q Consensus 533 ----~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d 604 (672)
....+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+....+. +........ .+.|......
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSSSTTSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHcCCCChhhhhhhccC
Confidence 234578899999999764 588999999999999999999999976532211 001011000 0011000000
Q ss_pred hhh---hccc--C----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 605 VEL---MRFQ--N----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 605 ~~~---~~~~--~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
+.. .... . .......+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0000 0 01123567788889999999999999999985
No 192
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-37 Score=331.78 Aligned_cols=191 Identities=21% Similarity=0.381 Sum_probs=166.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+++..++||||+++|
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 468999999999999976 578899999876432 235688899999988 9999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC--CCC
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN--VPA 533 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~--~~~ 533 (672)
+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++.... ...
T Consensus 117 ~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 117 SLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999997432 489999999999999999999986 7 9999999999999999999999999986442 223
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 005875 534 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 579 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~ 579 (672)
...+++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4568899999999999999999999999999999999999997643
No 193
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.4e-37 Score=341.99 Aligned_cols=241 Identities=21% Similarity=0.343 Sum_probs=194.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc---cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV---VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.. +++.||||++.... .....+.+|++++.++ +||||+++++++.+....++||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 578999999999999975 57899999986542 3456788999999999 999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec---CCCCeEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~---~~~~~kl~DfGla~~~~~~ 532 (672)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999988643 24899999999999999999999998 99999999999995 4567999999999766433
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 533 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 533 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
....+|+.|+|||++.+ .++.++||||+||++|||++|+.||.+....+ ....+......... ..
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~-----~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDL-----PQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCSCS-----GG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCC-----cc
Confidence 23458899999999976 58999999999999999999999997643221 12222211111100 01
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. .....+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~---~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WR---TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG---GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cC---CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 122356678889999999999999999985
No 194
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-37 Score=332.11 Aligned_cols=195 Identities=22% Similarity=0.302 Sum_probs=165.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCc-----eeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN-----VVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-----iv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|+.. +++.||||+++........+..|+.++..+.+|++ |+++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 468999999999999976 46789999997654445667788888888855664 999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec--CCCCeEEeecCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN--QDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~--~~~~~kl~DfGla~~~~~ 531 (672)
+ |+|.+++.... ...+++..+..++.|++.||+|||.+. .+|+||||||+|||++ .++.+||+|||++.....
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 6 59999997543 234899999999999999999999521 2399999999999995 478899999999977654
Q ss_pred C-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 005875 532 P-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 579 (672)
Q Consensus 532 ~-~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~ 579 (672)
. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 214 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 214 RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 3 34568899999999999999999999999999999999999998654
No 195
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.9e-37 Score=320.73 Aligned_cols=240 Identities=24% Similarity=0.374 Sum_probs=196.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|... +++.||+|++.... ...+.+.+|+.++..+ +||||+++++++.+++..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 468999999999999965 57889999987553 2346789999999998 9999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 532 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 532 (672)
+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 99999963 24899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 533 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ......... ..
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~~~-------~~- 241 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL-IPKNNPPTL-------EG- 241 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHH-HHHSCCCCC-------CS-
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH------HHHHH-hhcCCCCCC-------cc-
Confidence 2345788999999999999999999999999999999999999754321 11111 111111000 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 646 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 646 (672)
.....+.+++.+||+.||++|||++|++++..
T Consensus 242 --~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 242 --NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp --SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred --ccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 11234677888999999999999999998644
No 196
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.5e-37 Score=356.71 Aligned_cols=238 Identities=24% Similarity=0.314 Sum_probs=195.1
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+... ++.||||++++.. ...+.+..|..++..+.+||||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 4689999999999999764 6789999997542 2345677888888888789999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC---
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 531 (672)
+|+|.++++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 426 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 532 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 532 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
.....||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+.. .....+...... ..
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~---------~p 562 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHNVA---------YP 562 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHSSCCC---------CC
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCCCC---------CC
Confidence 23456899999999999999999999999999999999999999864322 222222222110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 643 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 643 (672)
. .....+.+|+.+||+.||++||++ +||++
T Consensus 563 ~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 K---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp T---TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred c---cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 122456677789999999999997 77765
No 197
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=321.82 Aligned_cols=240 Identities=25% Similarity=0.407 Sum_probs=191.6
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+.||+|+||.||+|.... ++.||+|++.... ..+.+.+|++++..+ +||||+++++++..++..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 4689999999999999764 7899999987543 456788999999998 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC----CC
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 534 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~~ 534 (672)
.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 9998632 234899999999999999999999998 999999999999999999999999998665432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChH
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 614 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 614 (672)
..+++.|+|||++.+..++.++||||||+++|||++|+.||...... ...... ........ ....
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~~--------~~~~ 249 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFMI-PTNPPPTF--------RKPE 249 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHH-HHSCCCCC--------SSGG
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHHH-hcCCCccc--------CCcc
Confidence 45788999999999999999999999999999999999999753311 111111 11110000 0011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 615 EEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 615 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
.....+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 12345678888999999999999999987
No 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.4e-37 Score=343.50 Aligned_cols=241 Identities=22% Similarity=0.354 Sum_probs=191.4
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEeccccc--------------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV--------------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD 444 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~--------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~ 444 (672)
.+.||+|+||+||+|+... ++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence 4689999999999999764 67899999875432 245688999999999 8999999999999999
Q ss_pred eeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCC---CeEEe
Q 005875 445 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCIS 521 (672)
Q Consensus 445 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~ 521 (672)
..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999998643 24899999999999999999999998 99999999999999876 69999
Q ss_pred ecCCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcc
Q 005875 522 DFGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 598 (672)
Q Consensus 522 DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 598 (672)
|||++...... ....+|+.|+|||++.+ .++.++||||+||++|+|++|..||.+....+ ....+.....
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~ 264 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------IIKKVEKGKY 264 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCC
Confidence 99999766443 34568999999999874 68999999999999999999999998654221 1222211111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 599 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 599 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. + ...... ....+.+++.+||+.||++|||++|++++
T Consensus 265 ~~---~--~~~~~~---~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 YF---D--FNDWKN---ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CC---C--HHHHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC---C--ccccCC---CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 10 0 001111 12456778889999999999999999984
No 199
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.3e-37 Score=321.88 Aligned_cols=238 Identities=21% Similarity=0.349 Sum_probs=194.3
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+++..+ ++.+|+|++..... ..+.+.+|+.++..+ +||||+++++++.+++..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCC
Confidence 4689999999999999764 67899999875432 235678899999998 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999998642 24899999999999999999999998 999999999999999999999999998765422
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... ............ ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---------~~ 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLRIKKNEYS---------IP 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCCC---------CC
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhhccCC---------Cc
Confidence 2345788999999999989999999999999999999999999754321 111111111100 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 236 ---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 ---KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1112356678889999999999999999985
No 200
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2e-37 Score=317.32 Aligned_cols=238 Identities=21% Similarity=0.335 Sum_probs=188.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccC
Confidence 468999999999999976 68899999986542 2345788999999998 89999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 533 (672)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 95 GGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999999743 24899999999999999999999998 9999999999999999999999999987764432
Q ss_pred --CCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 534 --TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 534 --~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
...+++.|+|||++.+..+ +.++||||||+++|||++|+.||..... ......+...... . .
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~---~------~ 231 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV------PTLFKKIRGGVFY---I------P 231 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---C------C
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHhhcCccc---C------c
Confidence 3457888999999988765 5899999999999999999999975321 1111111111100 0 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 232 ---~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 ---EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1112356778889999999999999999984
No 201
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.2e-37 Score=345.50 Aligned_cols=241 Identities=23% Similarity=0.383 Sum_probs=195.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc----cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+.
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 578999999999999976 67899999986542 2456788999999999 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe---cCCCCeEEeecCCCCCCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~ 531 (672)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++.....
T Consensus 110 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999998743 34899999999999999999999998 9999999999999 5678999999999876554
Q ss_pred CC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 532 PA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 532 ~~---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
.. ...+|+.|+|||++.+ .++.++||||+||++|||++|+.||.+....+ ....+......... .
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~-----~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD------ILKKVEKGKYTFEL-----P 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCS-----G
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCC-----c
Confidence 33 2357899999999976 68999999999999999999999998653221 12222221111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
... .....+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~---~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWK---KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 111 122456678889999999999999999984
No 202
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=319.92 Aligned_cols=243 Identities=24% Similarity=0.312 Sum_probs=191.5
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
.+||+|+||+||+|... +++.||+|.+..... ..+.+.+|+.++..+ +||||+++++++.+.+..++||||+++++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 47999999999999964 577899999876533 346788999999998 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC-CCCeEEeecCCCCCCCC----CC
Q 005875 459 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNV----PA 533 (672)
Q Consensus 459 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-~~~~kl~DfGla~~~~~----~~ 533 (672)
.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++..... ..
T Consensus 107 ~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 107 SALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 999975432 234678999999999999999999998 999999999999988 89999999999876543 22
Q ss_pred CCCCCCcccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhccc
Q 005875 534 TPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 611 (672)
Q Consensus 534 ~~~~~~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 611 (672)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||......+ ...............
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~--------- 247 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGMFKVHPEI--------- 247 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHHHCCCCCC---------
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhccccccccc---------
Confidence 345788999999997643 7899999999999999999999996432111 000000000000000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 612 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 612 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.......+.+++.+||+.||++|||++|++++
T Consensus 248 -~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 248 -PESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01123456778889999999999999999863
No 203
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.4e-38 Score=325.52 Aligned_cols=249 Identities=25% Similarity=0.361 Sum_probs=188.0
Q ss_pred hccccccCcEEEEEEEEC--CCc--EEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE--EST--TVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~--~~~--~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|++. +++ .||+|+++.... ..+.+.+|++++.++ +||||+++++++..+. .++|||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence 468999999999999853 233 589998875432 235688999999999 8999999999997654 889999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999997532 24899999999999999999999998 99999999999999999999999999876543
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 532 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 532 ~~-------~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
.. ...++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.......
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~--- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGERL--- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCCC---
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCCC---
Confidence 22 2335678999999998889999999999999999999 99999754321 1122221111110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
.........+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 245 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 245 -------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred -------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 0011223457788889999999999999999999999876543
No 204
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.7e-37 Score=326.33 Aligned_cols=252 Identities=23% Similarity=0.356 Sum_probs=196.4
Q ss_pred hccccccCcEEEEEEEEC------CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|++. ++..||||++..... ...++.+|+.++.++ +||||+++++++.+++..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEe
Confidence 468999999999999842 466899999965422 345688899999999 99999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC---CCCeEEeecCCC
Q 005875 452 YFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLT 526 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla 526 (672)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999765321 1245899999999999999999999998 999999999999994 446999999988
Q ss_pred CCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 527 PLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 527 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
...... ....+++.|+|||++.+..++.++||||||+++|||+| |..||......+ ....+.... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~-~ 263 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------VLEFVTSGG-R 263 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHTTC-C
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH------HHHHHhcCC-C
Confidence 643221 22345778999999998899999999999999999998 999997543211 111111111 0
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
.. ........+.+++.+||+.||++||+++|++++|+.+.+..
T Consensus 264 ~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 264 MD----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CC----------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00 00112245677888999999999999999999999987654
No 205
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.6e-37 Score=342.42 Aligned_cols=245 Identities=21% Similarity=0.356 Sum_probs=191.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc---cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV---VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.. ++..||+|++.... .....+.+|++++..+ +||||+++++++.+....++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999976 57889999987653 2356788999999998 999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC---CCeEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~---~~~kl~DfGla~~~~~~ 532 (672)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||++......
T Consensus 121 g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999988643 24899999999999999999999998 9999999999999764 55999999999765433
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 533 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 533 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
....+|+.|+|||++. ..++.++||||+||++|||++|..||.+....+ ....+........ .+ .
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~--~~---~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE------ILRKVEKGKYTFD--SP---E 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCC--SG---G
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCC--ch---h
Confidence 3456899999999986 469999999999999999999999998654221 1222221111100 00 1
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHh
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 648 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i 648 (672)
... ....+.+++.+||+.||++|||+.|++++ +++.
T Consensus 261 ~~~---~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 261 WKN---VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp GTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred ccc---CCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 111 22346677889999999999999999974 5544
No 206
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.6e-37 Score=327.77 Aligned_cols=238 Identities=21% Similarity=0.350 Sum_probs=194.3
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEeccccc----ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+++..+ ++.+|+|++..... ..+.+.+|+.++..+ +|+||+++++++.+.+..++||||++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCC
Confidence 4689999999999999764 67899999875432 235678899999998 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC--
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 532 (672)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 125 ~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 125 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999998642 24899999999999999999999998 999999999999999999999999999765422
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 533 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 533 --~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+...... ..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~---------~~ 261 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLRIKKNEYS---------IP 261 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCC---------CC
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHHhcCCCC---------CC
Confidence 2345788999999999989999999999999999999999999754321 111111111110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. .....+.+++.+||+.||++|||++|++++
T Consensus 262 ~---~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 K---HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c---cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 112346678889999999999999999984
No 207
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.7e-38 Score=330.33 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=184.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.. +++.||+|+++..... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCCC
Confidence 468999999999999965 5788999999754332 34577899999999 999999999999999999999999985
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec-----CCCCeEEeecCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-----QDLDGCISDFGLTPLMN 530 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-----~~~~~kl~DfGla~~~~ 530 (672)
+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++....
T Consensus 118 -~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 118 -DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp -EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred -CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999997533 3899999999999999999999998 99999999999994 45569999999987554
Q ss_pred CC----CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh---hcccc--
Q 005875 531 VP----ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---EEWTA-- 600 (672)
Q Consensus 531 ~~----~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~-- 600 (672)
.. ....+++.|+|||++.+. .++.++|||||||++|||++|+.||.+....+. +......... ..+..
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSTTGG
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHHHHHHhCCCchhhhhhhh
Confidence 22 234568899999999874 489999999999999999999999976432211 0000000000 00000
Q ss_pred --ccchhhhh--cccChHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 601 --EVFDVELM--RFQNIEE-----EMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 601 --~~~d~~~~--~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
..+..... ....... ....+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000000 0000111 1245678888999999999999999987
No 208
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.6e-37 Score=325.17 Aligned_cols=245 Identities=19% Similarity=0.283 Sum_probs=168.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe----CCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~~ 454 (672)
.++||+|+||+||+|... +++.||+|++... ....+|+....+..+||||+++++++.. +...++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 357999999999999976 5889999998653 3344555554555599999999999976 445799999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC---CCCeEEeecCCCCCCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNV 531 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~ 531 (672)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++.....
T Consensus 110 gg~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 110 GGELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp TEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999998543 235999999999999999999999998 999999999999986 45599999999976543
Q ss_pred C--CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 532 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 532 ~--~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
. ....+++.|+|||++.+..++.++||||||+++|||++|+.||............ ......... .... ..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~~~--~~~~---~~ 256 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM--KRRIRLGQY--GFPN---PE 256 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CCCT---TT
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH--HHhhhcccc--ccCc---hh
Confidence 2 2345788999999998888999999999999999999999999765433221100 000000000 0000 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. ......+.+++.+||+.||++|||++|++++
T Consensus 257 ~---~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 W---SEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp S---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred h---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1223456778889999999999999999983
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.6e-37 Score=320.29 Aligned_cols=254 Identities=22% Similarity=0.346 Sum_probs=190.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|++++.++ +||||+++++++..++..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEccc-
Confidence 367999999999999976 578999999875432 235788999999998 89999999999999999999999998
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC---
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 532 (672)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 86 QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 59999997543 234899999999999999999999998 999999999999999999999999988654322
Q ss_pred -CCCCCCCcccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhh---ccc----cccc
Q 005875 533 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE---EWT----AEVF 603 (672)
Q Consensus 533 -~~~~~~~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~ 603 (672)
....+++.|+|||++.+.. ++.++||||||+++|||++|+.||.+....+. +.......... .+. ...+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCchhhhhHhhcCccc
Confidence 2345788999999998765 78999999999999999999999986532211 01111100000 000 0000
Q ss_pred hhhhhc--ccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 604 DVELMR--FQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 604 d~~~~~--~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
.+.... .... ......+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000 012245678888999999999999999987
No 210
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-37 Score=321.36 Aligned_cols=242 Identities=21% Similarity=0.337 Sum_probs=189.5
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
.+.||+|+||+||+|+... ++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+++..++||||+++++
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 4679999999999999864 7889999987553 3456788999999998 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC----CCCC
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM----NVPA 533 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~----~~~~ 533 (672)
|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++... ....
T Consensus 103 l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 103 VDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999986422 24899999999999999999999998 999999999999999999999999987432 1223
Q ss_pred CCCCCCcccCcccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 534 TPSRSAGYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 534 ~~~~~~~y~aPE~~-----~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
...+++.|+|||++ ....++.++||||||+++|||++|+.||...... ............. ..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~-~~----- 243 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKSDPPT-LL----- 243 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSCCCC-CS-----
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHhccCCcc-cC-----
Confidence 45688899999998 4667899999999999999999999999754321 1111211111110 00
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
........+.+++.+||+.||++|||++|++++
T Consensus 244 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 244 ---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ---CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 011122456778889999999999999999863
No 211
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.9e-37 Score=325.44 Aligned_cols=250 Identities=20% Similarity=0.319 Sum_probs=185.6
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC------------hhhHHHHHHHHHHHcCCCceeceEEEEEeC----
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG------------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK---- 443 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~---- 443 (672)
.+.||+|+||.||+|...+++.||||++...... .+.+.+|++++.++ +||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTT
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCC
Confidence 4689999999999999888999999998654321 15688999999999 899999999998653
Q ss_pred -CeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEee
Q 005875 444 -DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 522 (672)
Q Consensus 444 -~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 522 (672)
...++||||++ |+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred cceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEe
Confidence 35799999998 5888888743 234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCC---CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcc
Q 005875 523 FGLTPLMNVP---ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 598 (672)
Q Consensus 523 fGla~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 598 (672)
||++...... ....+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ...+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~------~~~i~~~~~ 251 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ------LNKIVEVVG 251 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHHHHC
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH------HHHHHHHcC
Confidence 9999754332 23457888999999877 6789999999999999999999999986532211 111110000
Q ss_pred c---c-----------ccchhhhhc--ccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 599 T---A-----------EVFDVELMR--FQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 599 ~---~-----------~~~d~~~~~--~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. . ......... ... .......+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 0 000000000 000 01123457788889999999999999999983
No 212
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.3e-36 Score=331.92 Aligned_cols=187 Identities=26% Similarity=0.400 Sum_probs=158.9
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeC-----CeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~ 450 (672)
.+.||+|+||+||+|+... ++.||||++...... .+.+.+|++++..+ +||||+++++++... +..|+||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 4689999999999999754 678999999765332 35688999999999 899999999999776 5689999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||++ |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9987 5999999742 34899999999999999999999998 9999999999999999999999999997653
Q ss_pred CC--------------------------CCCCCCCcccCcccc-cCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 005875 531 VP--------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 576 (672)
Q Consensus 531 ~~--------------------------~~~~~~~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~el~tg~~pf~ 576 (672)
.. ....+|+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 22 334578999999986 56679999999999999999998655554
No 213
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.7e-37 Score=316.75 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=178.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccCh--hhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK--RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+.. +++.||+|+++...... .....|...+.+..+||||+++++++.+++..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-
Confidence 468999999999999974 67889999997653322 23333444433444899999999999999999999999985
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
+|.+++..... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 88777753211 123599999999999999999999998 8 9999999999999999999999999997654332
Q ss_pred -CCCCCCcccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 534 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 534 -~~~~~~~y~aPE~~----~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||...... .............. ..
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~-~~----- 235 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPSPQ-LP----- 235 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCCCC-CC-----
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-----HHHHHHHhccCCCC-cc-----
Confidence 23578899999996 5667889999999999999999999999743211 11111111111110 00
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHh
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEV 648 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i 648 (672)
.......+.+++.+||+.||++|||++|+++ .++..
T Consensus 236 ----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 236 ----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp ----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred ----cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 0112345678888999999999999999998 44443
No 214
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.3e-36 Score=325.53 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=184.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCC------eeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lV 449 (672)
.+.||+|+||+||+|... +++.||||++...... .+.+.+|+.++..+ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEE
Confidence 468999999999999965 5788999999764332 34677899999998 9999999999997665 67999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||+++ +|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 999975 78888852 2889999999999999999999998 999999999999999999999999999766
Q ss_pred CCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCC---------hhHHH-------
Q 005875 530 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD---------LPRWV------- 590 (672)
Q Consensus 530 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~---------~~~~~------- 590 (672)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+... .+.+.
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 433 23457889999999999999999999999999999999999998654211100 00000
Q ss_pred HHhhhhccc--cccchhhhh---cc---cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 591 QSVVREEWT--AEVFDVELM---RF---QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 591 ~~~~~~~~~--~~~~d~~~~---~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......... ...+..... .. .........+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 000000000 00 0012234568889999999999999999999984
No 215
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=9.6e-38 Score=333.39 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=175.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeC------CeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lV 449 (672)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|++++..+ +||||+++++++... ...++|
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEE
Confidence 468999999999999964 5788999998754332 35677899999999 899999999999754 567999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 113 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 9999 6899998863 24999999999999999999999998 999999999999999999999999999775
Q ss_pred CCC-CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhh---ccccccch
Q 005875 530 NVP-ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE---EWTAEVFD 604 (672)
Q Consensus 530 ~~~-~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d 604 (672)
... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. .......... .....+..
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHTTCCC
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHhhh
Confidence 443 23467899999999977 6789999999999999999999999986542211 1111111000 00000000
Q ss_pred h-------hhhc--ccChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 605 V-------ELMR--FQNIE----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 605 ~-------~~~~--~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
. .+.. ..... .....+.+|+.+||+.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000 00001 112456788889999999999999999984
No 216
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.6e-37 Score=318.47 Aligned_cols=249 Identities=20% Similarity=0.306 Sum_probs=193.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEe--CCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+++.. +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+ ....++||||+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 468999999999999976 5788999999754332 35688899999999 89999999998864 56789999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~--~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 90 EGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 99999999975332 2334899999999999999999999976 23499999999999999999999999999876543
Q ss_pred CC----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 532 PA----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 532 ~~----~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+. .......
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~-~~~~~~~----- 236 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ELAGKIR-EGKFRRI----- 236 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHH-HTCCCCC-----
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH------HHHHHHh-hcccccC-----
Confidence 32 124688899999999989999999999999999999999999754321 1111111 1111110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 647 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 647 (672)
.......+.+++.+||+.||++|||++|+++++..
T Consensus 237 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 237 -----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 01122456778889999999999999999987653
No 217
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=5.3e-37 Score=317.80 Aligned_cols=242 Identities=19% Similarity=0.351 Sum_probs=193.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc----------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL 448 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 448 (672)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++.+||||+++++++..++..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 468999999999999976 578899999865421 134577899999999669999999999999999999
Q ss_pred EEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCC
Q 005875 449 VYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 528 (672)
Q Consensus 449 V~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~ 528 (672)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999742 24899999999999999999999998 99999999999999999999999999876
Q ss_pred CCCC---CCCCCCCcccCccccc------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccc
Q 005875 529 MNVP---ATPSRSAGYRAPEVIE------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 599 (672)
Q Consensus 529 ~~~~---~~~~~~~~y~aPE~~~------~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 599 (672)
.... ....+++.|+|||++. ...++.++||||||+++|||++|..||...... .....+......
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~ 247 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM------LMLRMIMSGNYQ 247 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCC
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH------HHHHHHhcCCcc
Confidence 5432 2345788999999985 456889999999999999999999999754321 111111111111
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 600 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 600 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
.. .+ ........+.+++.+||+.||++|||++|+++
T Consensus 248 ~~--~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 FG--SP------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CC--TT------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cC--cc------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00 00 01122345778888999999999999999986
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2e-36 Score=317.39 Aligned_cols=241 Identities=23% Similarity=0.381 Sum_probs=187.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 449 (672)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++..++ .++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEE
Confidence 578999999999999975 468899999865421 124588999999999 9999999999987654 8999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC---eEEeecCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLT 526 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla 526 (672)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 9999999999998642 34899999999999999999999998 999999999999987665 999999999
Q ss_pred CCCCCCC---CCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcccc
Q 005875 527 PLMNVPA---TPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 600 (672)
Q Consensus 527 ~~~~~~~---~~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (672)
....... ...+++.|+|||++. ...++.++|||||||++|||++|..||....... .+..... .... .
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~---~~~~-~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT---SGKY-N 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH---HTCC-C
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH---hCcc-c
Confidence 7764332 224788999999974 5678899999999999999999999997654322 1111111 1100 0
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 601 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 601 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
..+.. . ......+.+++.+||+.||++|||++|+++
T Consensus 239 --~~~~~--~---~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEV--W---AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHH--H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchh--h---hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 0 112345678888999999999999999985
No 219
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.6e-37 Score=320.42 Aligned_cols=254 Identities=21% Similarity=0.314 Sum_probs=192.2
Q ss_pred hccccccCcEEEEEEEE--CCCcEEEEEEeccccc---ChhhHHHHHHHHHHHc--CCCceeceEEEEE-----eCCeeE
Q 005875 380 AEVLGKGSYGTAYKAVL--EESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVG--QHPNVVPLRAYYY-----SKDEKL 447 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~--~h~niv~l~~~~~-----~~~~~~ 447 (672)
.+.||+|+||+||+|+. .+++.||+|+++.... ....+.+|+.++..+. +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 46899999999999997 3578899999875432 2346778888887765 7999999999987 456789
Q ss_pred EEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 448 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 448 lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
+||||++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 9999998 69999997543 234899999999999999999999998 9999999999999999999999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhh----hhcccc
Q 005875 528 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV----REEWTA 600 (672)
Q Consensus 528 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~ 600 (672)
..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||.+....+. ........ ...+..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ---LGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCGGGSCT
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHcCCCCcccCcc
Confidence 65432 234578899999999999999999999999999999999999986542211 11110000 011110
Q ss_pred ccchhh--hh------cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 601 EVFDVE--LM------RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 601 ~~~d~~--~~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
....+. .. ...........+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 00 00000112345667888999999999999999996
No 220
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=6e-37 Score=327.17 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=190.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeC-----CeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~e 451 (672)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEc
Confidence 468999999999999965 567899999875332 235688999999999 899999999999765 36899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
|++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 997 4999998642 3899999999999999999999998 99999999999999999999999999976542
Q ss_pred C-------CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccc---c
Q 005875 532 P-------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT---A 600 (672)
Q Consensus 532 ~-------~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~ 600 (672)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ............ .
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL---NHILGILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH---HHHHHHHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHHHhCCCCHHHHH
Confidence 2 23467899999998754 45899999999999999999999999865433321 111111000000 0
Q ss_pred ccchh-------hhh--cccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 601 EVFDV-------ELM--RFQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 601 ~~~d~-------~~~--~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
...+. ... ..... ......+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000 00000 1122457788889999999999999999983
No 221
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.3e-37 Score=325.05 Aligned_cols=253 Identities=17% Similarity=0.282 Sum_probs=192.9
Q ss_pred hccccccCcEEEEEEEECC-C-cEEEEEEecccccChhhHHHHHHHHHHHcCCCc------eeceEEEEEeCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEE-S-TTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN------VVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~-~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n------iv~l~~~~~~~~~~~lV~e 451 (672)
.+.||+|+||+||+|.... + +.||+|+++......+.+.+|++++..+ +|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 4689999999999999753 3 6899999976544456788899999888 4444 9999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEe-------------------
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI------------------- 512 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl------------------- 512 (672)
|+ ++++.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence 99 567777765432 234899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 005875 513 NQDLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 591 (672)
Q Consensus 513 ~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 591 (672)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ....
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL---VMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH
Confidence 66889999999999765443 3446889999999999999999999999999999999999999865432211 1111
Q ss_pred Hhhhh---cc-----cccc-------chh--------------hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005875 592 SVVRE---EW-----TAEV-------FDV--------------ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 642 (672)
Q Consensus 592 ~~~~~---~~-----~~~~-------~d~--------------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 642 (672)
..... .+ .... ++. ..............+.+++.+||+.||++|||++|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 11000 00 0000 000 0000011123455788999999999999999999998
Q ss_pred H
Q 005875 643 R 643 (672)
Q Consensus 643 ~ 643 (672)
+
T Consensus 333 ~ 333 (355)
T 2eu9_A 333 L 333 (355)
T ss_dssp T
T ss_pred c
Confidence 6
No 222
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.7e-37 Score=335.67 Aligned_cols=245 Identities=23% Similarity=0.363 Sum_probs=183.8
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||.+...+++.||||++.... .+.+.+|++++.++.+||||+++++++.+++..++||||++ |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 36799999999987777779999999986532 35678899999887789999999999999999999999996 6999
Q ss_pred hhhccCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC-------------CCeEEeecC
Q 005875 460 TLLHGNRGAGR--TPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-------------LDGCISDFG 524 (672)
Q Consensus 460 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-------------~~~kl~DfG 524 (672)
+++........ ...++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 99975432111 11133456789999999999999998 9999999999999754 489999999
Q ss_pred CCCCCCCCC--------CCCCCCcccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhH
Q 005875 525 LTPLMNVPA--------TPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPR 588 (672)
Q Consensus 525 la~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~ 588 (672)
+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||++ |+.||......+
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------ 247 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------ 247 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH------
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH------
Confidence 997664322 2357899999999975 668999999999999999999 999996432111
Q ss_pred HHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 589 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 589 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
..+.......... ...........+.+++.+||+.||++|||+.|+++
T Consensus 248 --~~i~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111110000 01112344567788899999999999999999986
No 223
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.8e-37 Score=324.88 Aligned_cols=252 Identities=16% Similarity=0.253 Sum_probs=195.7
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccCh------------------hhHHHHHHHHHHHcCCCceeceEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGK------------------RDFEQQMEIVGRVGQHPNVVPLRAYYY 441 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~------------------~~~~~e~~~l~~l~~h~niv~l~~~~~ 441 (672)
.+.||+|+||.||+|.. +++.||+|++....... +.+.+|++++.++ +||||+++++++.
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 113 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEE
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 46899999999999999 89999999997543221 7789999999999 8999999999999
Q ss_pred eCCeeEEEEEecCCCchhhh------hccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccCCCCCCCEEecC
Q 005875 442 SKDEKLLVYDYFASGSLSTL------LHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQ 514 (672)
Q Consensus 442 ~~~~~~lV~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~-~~~~~ivHrDLk~~NILl~~ 514 (672)
+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDK 187 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcC
Confidence 99999999999999999999 5432 13459999999999999999999999 87 999999999999999
Q ss_pred CCCeEEeecCCCCCCCCC--CCCCCCCcccCcccccCC-CCCC-ccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 005875 515 DLDGCISDFGLTPLMNVP--ATPSRSAGYRAPEVIETR-KHSH-KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 590 (672)
Q Consensus 515 ~~~~kl~DfGla~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~ 590 (672)
++.+||+|||++...... ....+++.|+|||++.+. .++. ++||||||+++|||++|..||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHH
Confidence 999999999999765332 344578899999999887 5666 999999999999999999999865431 1111
Q ss_pred HHhhhhcccccc----chhhhhc---ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 591 QSVVREEWTAEV----FDVELMR---FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 591 ~~~~~~~~~~~~----~d~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
..+......... +...... ..........+.+++.+||+.||++|||++|++++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111110000 0000000 00001223456788889999999999999999873
No 224
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.2e-37 Score=329.53 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=188.8
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCe------eEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lV~e~~ 453 (672)
.+.||+|+||+||+|+..++..+|+|++.... ....+|++++..+ +||||+++++++..... .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 46899999999999999888889999886532 2334689999998 99999999999976543 78999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec-CCCCeEEeecCCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla~~~~~~ 532 (672)
+++.+........ ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 8754443332111 1234899999999999999999999998 99999999999999 7999999999999765332
Q ss_pred ---CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHh----------hhhcc
Q 005875 533 ---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV----------VREEW 598 (672)
Q Consensus 533 ---~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~----------~~~~~ 598 (672)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||.+....+. +....... ....+
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhhChhh
Confidence 234578899999998765 589999999999999999999999986542221 11111000 00000
Q ss_pred ccccchhhhhcccChH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhh
Q 005875 599 TAEVFDVELMRFQNIE-----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVRQ 650 (672)
Q Consensus 599 ~~~~~d~~~~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~ 650 (672)
....+. .. ...... .....+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 274 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 274 MEHKFP-QI-RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SSSCCC-CC-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hhhccc-cc-cCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 000000 00 000000 123467788889999999999999999984 555543
No 225
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-37 Score=323.41 Aligned_cols=253 Identities=24% Similarity=0.388 Sum_probs=178.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc--cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|... +++.||+|++.... ...+++.+|++++.++ +||||+++++++..++..++||||+++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 468999999999999954 57899999886542 2345677888888888 8999999999999999999999999999
Q ss_pred chhhhhccCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCC-
Q 005875 457 SLSTLLHGNR---GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP- 532 (672)
Q Consensus 457 ~L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~- 532 (672)
+|.+++.... ......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999986321 112345899999999999999999999998 999999999999999999999999988654321
Q ss_pred --------CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 533 --------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 533 --------~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+. .......... ..
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~~~-~~- 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV------LMLTLQNDPP-SL- 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH------HHHHHTSSCC-CT-
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH------HHHHhccCCC-cc-
Confidence 22357889999999976 5689999999999999999999999976432211 1111111100 00
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
................+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000011122456778889999999999999999873
No 226
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.6e-36 Score=321.48 Aligned_cols=263 Identities=20% Similarity=0.289 Sum_probs=182.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCe-------eEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-------KLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-------~~lV~e 451 (672)
.+.||+|+||+||+|+.. +++.||||++...........++++.+..+ +||||+++++++..... .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999975 578999999876555556677788888888 99999999999976443 789999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCcccCCCCCCCEEecC-CCCeEEeecCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--SMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPL 528 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--~~~~~~ivHrDLk~~NILl~~-~~~~kl~DfGla~~ 528 (672)
|++++ |.+.+.... .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||++..
T Consensus 107 ~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 107 YVPDT-LHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CCSCB-HHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred ccccc-HHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 99874 444332111 12334889999999999999999999 877 999999999999997 89999999999987
Q ss_pred CCCCC---CCCCCCcccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHH-----------h
Q 005875 529 MNVPA---TPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQS-----------V 593 (672)
Q Consensus 529 ~~~~~---~~~~~~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~-----------~ 593 (672)
..... ...+++.|+|||++.+.. ++.++|||||||++|||++|+.||.+....+.. ...... .
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHH
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHHHHHcCCCCHHHHHhc
Confidence 65432 345788999999986654 899999999999999999999999865432211 011100 0
Q ss_pred hhhccccccchh-----hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhh
Q 005875 594 VREEWTAEVFDV-----ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVRQ 650 (672)
Q Consensus 594 ~~~~~~~~~~d~-----~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~ 650 (672)
..........+. ..............+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 000000000000 000000011134567888889999999999999999984 555543
No 227
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.8e-37 Score=323.44 Aligned_cols=245 Identities=22% Similarity=0.331 Sum_probs=188.7
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccC--hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+. .+++.||||++...... ..++..|..++.+..+||||+++++++.+++..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 36799999999999997 46888999999765433 334555666644444999999999999999999999999986
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
+|.+++..... ....+++..+..++.||+.||+|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccccccc
Confidence 99888864211 123599999999999999999999987 7 9999999999999999999999999987654321
Q ss_pred -CCCCCCcccCccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 534 -TPSRSAGYRAPEVIE----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 534 -~~~~~~~y~aPE~~~----~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
...+++.|+|||++. ...++.++|||||||++|||++|+.||...... ............. ...
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~-~~~----- 279 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPSP-QLP----- 279 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCCC-CCC-----
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-----HHHHHHHhcCCCC-CCC-----
Confidence 245889999999974 346889999999999999999999999753211 1111111111110 000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.......+.+++.+||+.||++|||+.|++++
T Consensus 280 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 280 ----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 01123457788889999999999999999983
No 228
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.1e-37 Score=333.90 Aligned_cols=259 Identities=25% Similarity=0.347 Sum_probs=187.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeC----C--eeEEEEEe
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK----D--EKLLVYDY 452 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~----~--~~~lV~e~ 452 (672)
.+.||+|+||+||+|++. +++.||||++... .....+|++++..+ +||||+++++++... + ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD---KRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC---TTSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccc---chhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 468999999999999986 4889999998653 23345799999998 999999999998642 1 35799999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC-CCeEEeecCCCCCCCC
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNV 531 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-~~~kl~DfGla~~~~~ 531 (672)
+++ ++.+.+..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 986 66665542111 1345999999999999999999999998 9999999999999965 5689999999976533
Q ss_pred C---CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh---hcc---ccc
Q 005875 532 P---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---EEW---TAE 601 (672)
Q Consensus 532 ~---~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~---~~~ 601 (672)
. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+. +......... +.+ ...
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHHHHHCSC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhhChh
Confidence 2 234678999999999764 789999999999999999999999986542211 1111110000 000 000
Q ss_pred cchhhhhc--ccCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhh
Q 005875 602 VFDVELMR--FQNI-----EEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 649 (672)
Q Consensus 602 ~~d~~~~~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~ 649 (672)
..+..+.. .... ......+.+|+.+||+.||++|||+.|+++ .++++.
T Consensus 288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 00000000 0000 111246778888999999999999999997 344443
No 229
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=322.78 Aligned_cols=246 Identities=20% Similarity=0.324 Sum_probs=189.3
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||+||+|+..+ .+|+|+++.... ..+.+.+|+.++.++ +||||+++++++.+.+..++||||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCC
Confidence 4689999999999999864 499999875432 235677889999888 8999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC-----
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 531 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 531 (672)
+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||++.....
T Consensus 115 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 999999743 234899999999999999999999998 99999999999998 68999999999865431
Q ss_pred ----CCCCCCCCcccCcccccC---------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcc
Q 005875 532 ----PATPSRSAGYRAPEVIET---------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 598 (672)
Q Consensus 532 ----~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 598 (672)
.....+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....... ..
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~-~~ 259 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA------IIWQMGT-GM 259 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH------HHHHHHT-TC
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHhcc-CC
Confidence 112336788999999874 347889999999999999999999997543211 1111111 11
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005875 599 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 652 (672)
Q Consensus 599 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 652 (672)
...... . .....+.+++.+||+.||++|||++|+++.|+++....
T Consensus 260 ~~~~~~------~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 KPNLSQ------I---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCC------S---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCc------C---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 111100 0 11234667888999999999999999999999998664
No 230
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4e-37 Score=352.06 Aligned_cols=246 Identities=22% Similarity=0.360 Sum_probs=196.6
Q ss_pred hccccccCcEEEEEEEECC----CcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 380 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+.||+|+||+||+|.+.. +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++. ++..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCceEEEEEcC
Confidence 5689999999999999743 45689998875432 235788999999999 9999999999984 56789999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC
Q 005875 454 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 533 (672)
Q Consensus 454 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 533 (672)
++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999998764432
Q ss_pred C-----CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhh
Q 005875 534 T-----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 607 (672)
Q Consensus 534 ~-----~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (672)
. ..+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+ ....+..... ..
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------~~~~i~~~~~-~~------ 612 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGER-LP------ 612 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHHTCC-CC------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCC-CC------
Confidence 1 234678999999998899999999999999999997 999997643221 1111111110 00
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005875 608 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 651 (672)
Q Consensus 608 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 651 (672)
........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 613 ----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 613 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0112234567888899999999999999999999998754
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8e-37 Score=327.04 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=190.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCee------EEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------LLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------~lV 449 (672)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|+.++..+ +||||+++++++...+.. ++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEE
Confidence 468999999999999965 5788999999765433 35678899999999 899999999999877654 999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||+. |+|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99998 588888742 2899999999999999999999998 999999999999999999999999999766
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhh------ccccc
Q 005875 530 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 601 (672)
Q Consensus 530 ~~~~-~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~~ 601 (672)
.... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ...+... .....
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ------LTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHHHHCCCCHHHHTT
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHHHhCCCcHHHHHH
Confidence 5433 3467899999999987 6789999999999999999999999986532211 1111100 00000
Q ss_pred cchh-------hhh--cccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 005875 602 VFDV-------ELM--RFQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 649 (672)
Q Consensus 602 ~~d~-------~~~--~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~ 649 (672)
..+. ... ..... ......+.+++.+||+.||++|||++|++++ ++.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence 0000 000 00000 1123567788889999999999999999984 44443
No 232
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=322.77 Aligned_cols=255 Identities=23% Similarity=0.319 Sum_probs=189.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEEeCCe------eEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLV 449 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lV 449 (672)
.+.||+|+||+||+|... +++.||||++...... .+.+.+|+.++..+ +||||+++++++...+. .++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEE
Confidence 467999999999999975 5789999999765433 34678899999998 89999999999987654 4999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||++ |+|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 108 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred ecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 99997 588888742 3899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh---hccccccch
Q 005875 530 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---EEWTAEVFD 604 (672)
Q Consensus 530 ~~~~-~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d 604 (672)
.... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ......... ..+.....+
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHTTCSC
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHHhh
Confidence 4432 3457889999999877 6789999999999999999999999986542211 000000000 000000000
Q ss_pred h-------hh-----hc-ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 005875 605 V-------EL-----MR-FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 649 (672)
Q Consensus 605 ~-------~~-----~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~ 649 (672)
. .. .. ..........+.+++.+||+.||++|||++|++++ ++.+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 0 00 00 00011233567788889999999999999999974 44443
No 233
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-36 Score=327.62 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=188.6
Q ss_pred hccccccCcEEEEEEEE-CCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeC---------------
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------------- 443 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------------- 443 (672)
.+.||+|+||+||+|+. .+++.||+|++.... ....+|+++++.+ +||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC-CCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccc
Confidence 46899999999999996 468899999986542 3345789999988 999999999998543
Q ss_pred -----------------------CeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 005875 444 -----------------------DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKF 500 (672)
Q Consensus 444 -----------------------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~i 500 (672)
...++||||+++ +|.+.+..... ....+++..+..++.||+.||+|||+.+ |
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i 162 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG---I 162 (383)
T ss_dssp ----------------------CCEEEEEECCCSE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred cccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc---C
Confidence 337899999984 87777653211 1235999999999999999999999998 9
Q ss_pred ccCCCCCCCEEec-CCCCeEEeecCCCCCCCCC---CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCC
Q 005875 501 THGNIKASNVLIN-QDLDGCISDFGLTPLMNVP---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPL 575 (672)
Q Consensus 501 vHrDLk~~NILl~-~~~~~kl~DfGla~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf 575 (672)
+||||||+|||++ .++.+||+|||+++..... ....+++.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6889999999999765332 344578899999998765 4899999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHhhhhc-----------ccc----ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 005875 576 QSPTRDDMVDLPRWVQSVVREE-----------WTA----EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDE 640 (672)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~----~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 640 (672)
.+....+. +.... ...... +.. ........ ..........+.+++.+||+.||++|||+.|
T Consensus 243 ~~~~~~~~--~~~i~-~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 243 SGETSIDQ--LVRII-QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR-KILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp CCSSHHHH--HHHHH-HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHH-HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCChHHH--HHHHH-HHhCCCCHHHHHHhCcccccccCCccCcccHH-hhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 86543221 11111 000000 000 00000000 0000112345778888999999999999999
Q ss_pred HHH--HHHHhhh
Q 005875 641 VVR--MIEEVRQ 650 (672)
Q Consensus 641 vl~--~L~~i~~ 650 (672)
+++ .++++..
T Consensus 319 ~l~hp~f~~~~~ 330 (383)
T 3eb0_A 319 AMAHPFFDHLRN 330 (383)
T ss_dssp HHTSGGGHHHHH
T ss_pred HhcCHHHHHHHh
Confidence 997 4565544
No 234
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6e-36 Score=312.41 Aligned_cols=241 Identities=20% Similarity=0.304 Sum_probs=188.4
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---hhhHHHHHHHHHHHcC-CCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||.||++...+++.||+|++...... .+.+.+|++++.++.+ |+||+++++++.+++..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4689999999999999988999999999754332 3568889999999954 7999999999999999999999 668
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++ +.+||+|||++.......
T Consensus 112 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 112 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 8999999753 24899999999999999999999998 999999999999964 899999999998654322
Q ss_pred ----CCCCCCcccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhcc
Q 005875 534 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 598 (672)
Q Consensus 534 ----~~~~~~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 598 (672)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhccc
Confidence 2357889999999875 4688899999999999999999999975321 1111222211111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005875 599 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 645 (672)
Q Consensus 599 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 645 (672)
.... ... ....+.+++.+||+.||++|||++|++++-
T Consensus 258 ~~~~-------~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 258 EIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCC-------ccc---chHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1100 001 123567788899999999999999999853
No 235
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.7e-36 Score=319.37 Aligned_cols=251 Identities=20% Similarity=0.266 Sum_probs=188.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeC-----CeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~e 451 (672)
.+.||+|+||+||+|+.. +++.||||++..... ....+.+|++++.++ +||||+++++++..+ ...++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEe
Confidence 468999999999999976 578899999864322 234677899999999 899999999998764 57899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
|+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 599999874 23899999999999999999999998 99999999999999999999999999976542
Q ss_pred C--------------CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhh
Q 005875 532 P--------------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 596 (672)
Q Consensus 532 ~--------------~~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 596 (672)
. ....+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCC
Confidence 1 12356888999998754 6789999999999999999999999986532110 0000000000
Q ss_pred cc----ccccchhh-------hhc--ccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 597 EW----TAEVFDVE-------LMR--FQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 597 ~~----~~~~~d~~-------~~~--~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. ........ ... ... .......+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 00000000 000 000 01123456788889999999999999999983
No 236
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.7e-36 Score=309.99 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=192.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc---ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 578999999999999976 578999999875432 356788999999999 999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCC---CCeEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~---~~~kl~DfGla~~~~~~ 532 (672)
++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.+ +.+||+|||++......
T Consensus 106 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999988643 24899999999999999999999998 9999999999999764 46999999998766443
Q ss_pred CCC---CCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhc
Q 005875 533 ATP---SRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 609 (672)
Q Consensus 533 ~~~---~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 609 (672)
... .+++.|+|||++.+ .++.++||||||+++|||++|+.||...... .....+........ ...
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~-----~~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYAFD-----LPQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCC-----SGG
T ss_pred CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCCCC-----chh
Confidence 222 25677999999876 4899999999999999999999999764321 11122111111100 001
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 610 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 610 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
... ....+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~---~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 WRT---ISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhh---cCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 111 22456778889999999999999999983
No 237
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=313.99 Aligned_cols=239 Identities=21% Similarity=0.335 Sum_probs=187.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccc-----cChhhHHHHHHHHHHHcCCCceeceEEEEE--eCCeeEEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYY--SKDEKLLVYD 451 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lV~e 451 (672)
.+.||+|+||.||++... +++.||+|+++... ...+.+.+|++++.++ +||||+++++++. +.+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 468999999999999975 57889999997542 2246788999999999 8999999999985 3457899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCC
Q 005875 452 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 531 (672)
Q Consensus 452 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 531 (672)
|++++ |.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred hccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 99886 767765432 235899999999999999999999998 99999999999999999999999999876532
Q ss_pred C------CCCCCCCcccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 532 P------ATPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 532 ~------~~~~~~~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
. ....+++.|+|||++.+.. ++.++||||||+++|||++|+.||..... ......+......
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~i~~~~~~---- 231 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI------YKLFENIGKGSYA---- 231 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCC----
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH------HHHHHHHhcCCCC----
Confidence 1 2345788999999997644 37799999999999999999999975421 1112221111110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.. ......+.+++.+||+.||++|||++|++++
T Consensus 232 -----~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 -----IP---GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----CC---SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----CC---CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 1122356678889999999999999999985
No 238
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=321.95 Aligned_cols=248 Identities=22% Similarity=0.308 Sum_probs=181.8
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCCceeceEEEEE--------------eC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYY--------------SK 443 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~--------------~~ 443 (672)
.+.||+|+||+||+|.... ++.||+|++..... ..+.+.+|++++.++ +||||+++++++. +.
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccccccccccccc
Confidence 4689999999999999875 78899999865432 245688999999999 9999999999873 34
Q ss_pred CeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec-CCCCeEEee
Q 005875 444 DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISD 522 (672)
Q Consensus 444 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~D 522 (672)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECC
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEcc
Confidence 67899999998 599999963 24899999999999999999999998 99999999999997 567999999
Q ss_pred cCCCCCCCCCC-------CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhh
Q 005875 523 FGLTPLMNVPA-------TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 594 (672)
Q Consensus 523 fGla~~~~~~~-------~~~~~~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 594 (672)
||++....... ...++..|+|||++.+ ..++.++||||||+++|||++|+.||.+....+ ....+.
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE------QMQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHH
Confidence 99998654321 1235778999998865 678999999999999999999999998654211 111111
Q ss_pred hhccc------cc-------cchhhhhcc-cCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 595 REEWT------AE-------VFDVELMRF-QNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 595 ~~~~~------~~-------~~d~~~~~~-~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
..... .+ ......... ... ......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 10000 00 000000000 000 1123457788889999999999999999884
No 239
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.5e-36 Score=309.79 Aligned_cols=241 Identities=21% Similarity=0.357 Sum_probs=184.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe-------------CCe
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-------------KDE 445 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-------------~~~ 445 (672)
.+.||+|+||+||+|+.. +++.||+|++.......+.+.+|++++.++ +||||+++++++.+ .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 468999999999999975 688999999976544456788999999998 89999999999865 346
Q ss_pred eEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCC
Q 005875 446 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 525 (672)
Q Consensus 446 ~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 525 (672)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 789999999999999997432 34788999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCC------------------CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 005875 526 TPLMNVP------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 586 (672)
Q Consensus 526 a~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~ 586 (672)
+...... ....+++.|+|||++.+. .++.++|||||||++|||++ ||.... +.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~ 234 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ER 234 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hH
Confidence 8765421 123467889999999764 68999999999999999998 553210 00
Q ss_pred hHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 587 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 587 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+..... .+.+. ........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVSI---EFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTTC---CCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhcccccc---ccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111000 00000 011223456778889999999999999999873
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.7e-36 Score=315.98 Aligned_cols=248 Identities=21% Similarity=0.342 Sum_probs=170.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccC--hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 456 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 456 (672)
.+.||+|+||.||+|... +++.||||++...... ...+..|+..+.+..+||||+++++++.+++..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 467999999999999975 5788999999764322 234555666444444899999999999999999999999986
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC--
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 533 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 533 (672)
+|.+++..........+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 887777532111234589999999999999999999998 8 9999999999999999999999999997664332
Q ss_pred -CCCCCCcccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhh
Q 005875 534 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 608 (672)
Q Consensus 534 -~~~~~~~y~aPE~~----~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (672)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||........ ......... ...... .
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~-~~~~~~---~ 253 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVVKGD-PPQLSN---S 253 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSC-CCCCCC---C
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHhcCC-CCCCCC---c
Confidence 23578889999999 456789999999999999999999999975432100 000000000 000000 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 609 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 609 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
... .....+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 254 EER---EFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SSC---CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccc---cCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 001 12245677888999999999999999988
No 241
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=327.91 Aligned_cols=239 Identities=21% Similarity=0.350 Sum_probs=180.6
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+.||+|+||+||.....+++.||||++.... ...+.+|++++..+.+|||||++++++.+.+..++||||++ |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 36899999999766666678999999986532 23467899999988789999999999999999999999996 5999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC-----CCCeEEeecCCCCCCCCC--
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----DLDGCISDFGLTPLMNVP-- 532 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-----~~~~kl~DfGla~~~~~~-- 532 (672)
+++..... ...+..+..++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99975432 2444556789999999999999998 999999999999953 335789999999765432
Q ss_pred -----CCCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 533 -----ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 533 -----~~~~~~~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
....||+.|+|||++. ...++.++|||||||++|||++ |..||...... ....... .......
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~~-~~~~~~~ 250 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILLG-ACSLDCL 250 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHTT-CCCCTTS
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHhc-cCCcccc
Confidence 2345899999999997 4567889999999999999999 99999643211 1111111 1100000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
.........+.+++.+||+.||++|||++|+++
T Consensus 251 -------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 -------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 011123345677888999999999999999995
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.4e-36 Score=316.65 Aligned_cols=233 Identities=21% Similarity=0.390 Sum_probs=189.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-------ChhhHHHHHHHHHHHc-CCCceeceEEEEEeCCeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVG-QHPNVVPLRAYYYSKDEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~-~h~niv~l~~~~~~~~~~~lV~ 450 (672)
.+.||+|+||+||+|... +++.||||++..... ..+.+.+|++++.++. .|+||+++++++.+++..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 468999999999999964 578899999976532 2256778999999995 3799999999999999999999
Q ss_pred EecCC-CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec-CCCCeEEeecCCCCC
Q 005875 451 DYFAS-GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPL 528 (672)
Q Consensus 451 e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla~~ 528 (672)
||+.+ ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||++..
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99986 8999999742 34899999999999999999999998 99999999999999 789999999999876
Q ss_pred CCCC--CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchh
Q 005875 529 MNVP--ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 605 (672)
Q Consensus 529 ~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 605 (672)
.... ....+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....... .+
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~---~~-- 262 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQV---FF-- 262 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCC---CC--
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcccc---cc--
Confidence 5433 23457889999999987665 678999999999999999999996421 0000000 00
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 606 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 606 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
.... ...+.+++.+||+.||++|||++|++++
T Consensus 263 ----~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 ----RQRV---SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----SSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----cccC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 2356678889999999999999999873
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=314.84 Aligned_cols=241 Identities=18% Similarity=0.316 Sum_probs=169.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEecccccCh--hhHHHHHH-HHHHHcCCCceeceEEEEEeCCeeEEEEEecCC
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK--RDFEQQME-IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 455 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~e~~-~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 455 (672)
.+.||+|+||.||+|+.. +++.||||++....... .++..|.. ++..+ +||||+++++++.+++..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEecc-C
Confidence 468999999999999975 58899999997653322 23333443 44444 9999999999999999999999999 4
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCC-
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 533 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 533 (672)
+.+..+.... ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 108 ~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 108 TCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 4555555422 23489999999999999999999995 7 9999999999999999999999999987654322
Q ss_pred --CCCCCCcccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhh
Q 005875 534 --TPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 606 (672)
Q Consensus 534 --~~~~~~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 606 (672)
...+++.|+|||++. ...++.++||||||+++|||++|+.||...... ..............
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~------ 249 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-----FEVLTKVLQEEPPL------ 249 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHHSCCCC------
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-----HHHHHHHhccCCCC------
Confidence 335788999999994 456889999999999999999999999753211 11122222211110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 607 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 607 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
...... ....+.+++.+||+.||++||+++|+++
T Consensus 250 ~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 LPGHMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000011 1235667888999999999999999988
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=312.88 Aligned_cols=233 Identities=23% Similarity=0.381 Sum_probs=184.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc-------ChhhHHHHHHHHHHHc---CCCceeceEEEEEeCCeeEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVG---QHPNVVPLRAYYYSKDEKLL 448 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~---~h~niv~l~~~~~~~~~~~l 448 (672)
.+.||+|+||.||+|+.. +++.||+|++..... ....+.+|+.++.++. +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 478999999999999864 578999999975432 2234667888888885 79999999999999999999
Q ss_pred EEEe-cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEec-CCCCeEEeecCCC
Q 005875 449 VYDY-FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLT 526 (672)
Q Consensus 449 V~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla 526 (672)
|||| +.+++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 7899999999742 24899999999999999999999998 99999999999999 8899999999998
Q ss_pred CCCCCC--CCCCCCCcccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccc
Q 005875 527 PLMNVP--ATPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 603 (672)
Q Consensus 527 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~-~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (672)
...... ....+++.|+|||++.+..+. .++||||||+++|||++|+.||.... .......
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~----- 250 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAEL----- 250 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTCC-----
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhcc-----
Confidence 765433 234578899999999876664 58999999999999999999996421 0010000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 604 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 604 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
... ......+.+++.+||+.||++|||++|++++
T Consensus 251 ----~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 ----HFP---AHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----CCC---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 1122356778889999999999999999874
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.4e-35 Score=299.42 Aligned_cols=228 Identities=12% Similarity=0.111 Sum_probs=178.1
Q ss_pred hccccccCcEEEEEEEECC-CcEEEEEEecccccCh----hhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecC
Q 005875 380 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGK----RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 454 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~----~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 454 (672)
.+.||+|+||.||+|+... ++.||+|++....... +.+.+|++++.++ +||||+++++++.+++..|+||||++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecC
Confidence 3689999999999999765 7899999998654432 5688899999888 99999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCCC
Q 005875 455 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 534 (672)
Q Consensus 455 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~ 534 (672)
+++|.++++.. ....++.+++.|++.||+|||+.+ |+||||||+|||++.++.+||+++|
T Consensus 115 g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 115 GGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence 99999999531 355678899999999999999998 9999999999999999999998553
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChH
Q 005875 535 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 614 (672)
Q Consensus 535 ~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 614 (672)
|++ .++.++|||||||++|||+||+.||.+....+..... ...... ....+. .....
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~~~----~~~~~~-~~~~~-- 231 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDTAG----QPIEPA-DIDRD-- 231 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCTTS----CBCCHH-HHCTT--
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHhcc----CCCChh-hcccC--
Confidence 333 3688999999999999999999999876544321100 000000 000000 00111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005875 615 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 653 (672)
Q Consensus 615 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 653 (672)
....+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 232 -~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 232 -IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp -SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred -CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 22346778889999999999 99999999999987654
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.5e-34 Score=299.89 Aligned_cols=226 Identities=18% Similarity=0.288 Sum_probs=174.8
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEe----CCeeEEEEEecCC
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFAS 455 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~~~ 455 (672)
+.||+|+||.||+|... +++.||+|+++. ...+.+|++++.++.+||||+++++++.. +...++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 57999999999999974 578999999864 35678899888777799999999999987 6678999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC---CCCeEEeecCCCCCCCCC
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 532 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~~ 532 (672)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 100 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 100 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 99999997543 235899999999999999999999998 999999999999998 7899999999986432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccC
Q 005875 533 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 612 (672)
Q Consensus 533 ~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 612 (672)
+..++.++|||||||++|||++|+.||......+.... .................
T Consensus 172 ----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-- 226 (299)
T 3m2w_A 172 ----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-------MKTRIRMGQYEFPNPEW-- 226 (299)
T ss_dssp ----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-------SCCSSCTTCCSSCHHHH--
T ss_pred ----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-------HHHHHhhccccCCchhc--
Confidence 24577899999999999999999999976543221100 00000000000000000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005875 613 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 644 (672)
Q Consensus 613 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 644 (672)
......+.+++.+||+.||++|||++|++++
T Consensus 227 -~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 227 -SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -ccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1123456778889999999999999999984
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.3e-35 Score=338.12 Aligned_cols=233 Identities=18% Similarity=0.266 Sum_probs=188.5
Q ss_pred hccccccCcEEEEEEEEC--CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCe-----eEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE--ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----KLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~lV~ 450 (672)
.+.||+|+||+||+|.+. +++.||||++..... ....+.+|++++.++ +||||+++++++...+. .|+||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 468999999999999975 578999999865422 234678899999998 89999999999987765 69999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++++|.+++.. .+++..++.++.||+.||+|||+++ |+||||||+|||++.+ .+||+|||+++...
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999988752 4899999999999999999999998 9999999999999986 89999999998877
Q ss_pred CCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcc
Q 005875 531 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 610 (672)
Q Consensus 531 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 610 (672)
......||++|+|||++.+. ++.++|||||||++|||++|..||.+........ .
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~------------------------~ 287 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE------------------------D 287 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT------------------------T
T ss_pred cCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccc------------------------c
Confidence 66667799999999999765 4889999999999999999999987532211100 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHHhh
Q 005875 611 QNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVRMIEEVR 649 (672)
Q Consensus 611 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~i~ 649 (672)
.........+.+++.+||+.||++||+ ++++...|..+.
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 001112345778888999999999995 667777776654
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.2e-35 Score=331.12 Aligned_cols=262 Identities=19% Similarity=0.287 Sum_probs=196.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc--ChhhHHHHHHHHHHHcCCCceeceEEEEEe------CCeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lV~ 450 (672)
.+.||+|+||+||+|... +++.||||++..... ..+.+.+|++++.++ +||||+++++++.. ++..++||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEEE
Confidence 478999999999999974 578899999875422 245688899999999 99999999999765 56779999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCC---eEEeecCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTP 527 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~ 527 (672)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++.
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 99999999999985432 234888999999999999999999998 999999999999997765 8999999998
Q ss_pred CCCCCC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHhhh---------
Q 005875 528 LMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR--------- 595 (672)
Q Consensus 528 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--------- 595 (672)
...... ...+++.|+|||++.+..++.++||||||+++|||++|..||...... ..|......
T Consensus 173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------CCSC
T ss_pred ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchhhhhh
Confidence 765432 345788999999999999999999999999999999999999753110 001000000
Q ss_pred hccccc-cchhhhhcc-cChHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHHhhhcC
Q 005875 596 EEWTAE-VFDVELMRF-QNIEEEMVQMLQIGMACVAKVPDMRPNMDE-----VVRMIEEVRQSD 652 (672)
Q Consensus 596 ~~~~~~-~~d~~~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e-----vl~~L~~i~~~~ 652 (672)
+..... .+....... .........+.+++.+||+.||++|||++| ..+.++++.+..
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000000 000000000 111234466788888999999999999988 567777776554
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-34 Score=313.03 Aligned_cols=236 Identities=12% Similarity=0.124 Sum_probs=171.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEeccccc----ChhhHHHHHHHHHHHcCC-Ccee---------c---------
Q 005875 380 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQH-PNVV---------P--------- 435 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h-~niv---------~--------- 435 (672)
.+.||+|+||+||+|++. +++.||||++..... ..+.+.+|+.++..+ +| +|.. .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhhcccCC
Confidence 468999999999999954 688999999873322 246788898888877 44 3211 1
Q ss_pred ---eEEEEEe-----CCeeEEEEEecCCCchhhhhccCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCC
Q 005875 436 ---LRAYYYS-----KDEKLLVYDYFASGSLSTLLHGNR--GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNI 505 (672)
Q Consensus 436 ---l~~~~~~-----~~~~~lV~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDL 505 (672)
++.++.. ....+++|+++ +++|.+++.... ......+++..+..++.||+.||+|||+++ |+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCc
Confidence 1111111 12346677655 679999884211 011234788899999999999999999998 999999
Q ss_pred CCCCEEecCCCCeEEeecCCCCCCCCC-CCCCCCCcccCcccc----------cCCCCCCccchhhHHHHHHHHHhCCCC
Q 005875 506 KASNVLINQDLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVI----------ETRKHSHKSDVYSFGVLLLEMLTGKAP 574 (672)
Q Consensus 506 k~~NILl~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~----------~~~~~~~~~DvwS~Gvvl~el~tg~~p 574 (672)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||++|+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998765443 23456 899999999 556688999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005875 575 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 643 (672)
Q Consensus 575 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 643 (672)
|......+... ..+.....++ ..+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~~~~~-------------------~~~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSE-------------------WIFRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSG-------------------GGGSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHH-------------------HHHhhcccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 98654332211 0010111122 45677888999999999999877754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.5e-33 Score=295.73 Aligned_cols=238 Identities=13% Similarity=0.173 Sum_probs=180.4
Q ss_pred HHhccccccCcEEEEEEEECCCcEEEEEEeccccc---------ChhhHHHHHHHHHHHc--------CCCceeceEEEE
Q 005875 378 ASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVG--------QHPNVVPLRAYY 440 (672)
Q Consensus 378 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~--------~h~niv~l~~~~ 440 (672)
...+.||+|+||+||+|+. +++.||||++..... ..+.+.+|+.+++.+. +||||+++.+++
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3468999999999999998 579999999975432 1267889999999885 488888887765
Q ss_pred E------------------------------eCCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 005875 441 Y------------------------------SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 490 (672)
Q Consensus 441 ~------------------------------~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~ 490 (672)
. .++..++||||+++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 3 26789999999999987777642 23899999999999999999
Q ss_pred HHH-hcCCCCcccCCCCCCCEEecCCC--------------------CeEEeecCCCCCCCCCCCCCCCCcccCcccccC
Q 005875 491 HIH-SMGGPKFTHGNIKASNVLINQDL--------------------DGCISDFGLTPLMNVPATPSRSAGYRAPEVIET 549 (672)
Q Consensus 491 ~LH-~~~~~~ivHrDLk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~ 549 (672)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||++.+
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 999 888 99999999999999887 8999999999876543 3468999999999987
Q ss_pred CCCCCccchhhHHHH-HHHHHhCCCCCCCCCCCCCCChhHHHHHhhhhccccccchhhhhcccChHHHHHHHHHHHHHcc
Q 005875 550 RKHSHKSDVYSFGVL-LLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACV 628 (672)
Q Consensus 550 ~~~~~~~DvwS~Gvv-l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl 628 (672)
.. +.++||||++++ .+++++|..||... .|................. ............+.+++.+||
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHYLTDKMLKQMTFKTK-CNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHHHHHHHHHTCCCSSC-CCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcch---------hhhhHHHHhhhhhhccCcc-cchhhhhhcCHHHHHHHHHHh
Confidence 66 889999998777 78889999998521 1211111100000000000 000112345567888999999
Q ss_pred cCCCCCCCCHHHHH
Q 005875 629 AKVPDMRPNMDEVV 642 (672)
Q Consensus 629 ~~dP~~RPs~~evl 642 (672)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999988
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.8e-29 Score=280.14 Aligned_cols=181 Identities=17% Similarity=0.105 Sum_probs=127.3
Q ss_pred cccccCcEEEEEEE-ECCCcEEEEEEeccccc-----------ChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEE
Q 005875 382 VLGKGSYGTAYKAV-LEESTTVVVKRLKEVVV-----------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 382 ~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~-----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 449 (672)
..+.|++|.+..++ .--|..+++|++..... ..++|.+|++++.++..|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666654 33478899999965421 2346899999999998899999999999999999999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 450 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 450 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
|||++||+|.+++... .+++.. +|+.||+.||+|+|++| ||||||||+|||++++|.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999743 236553 58899999999999999 999999999999999999999999999876
Q ss_pred CCCCC----CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCC
Q 005875 530 NVPAT----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 574 (672)
Q Consensus 530 ~~~~~----~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p 574 (672)
..... ..||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 54332 237889999999976 467789999999998887665444
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=3.5e-27 Score=246.03 Aligned_cols=188 Identities=36% Similarity=0.675 Sum_probs=169.6
Q ss_pred cCChhHHHHHHHHHHhCCCCC-CCCCCCCCCCCCC--cceeeecCCC--CeEEEEEeCCCCccc--cCCccccCCCCCCc
Q 005875 62 ADLNSDRQALLDFADAVPHLR-KLNWSSTNPICQS--WVGINCTQDR--TRVFGLRLPGIGLVG--PIPNNTLGKLDALE 134 (672)
Q Consensus 62 ~~~~~~~~al~~~~~~~~~~~-~~~w~~~~~~c~~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~p~~~~~~l~~L~ 134 (672)
.|.+.|+.||++||+++.+.. ..+|+.+.++| . |.||.|+... ++|+.|+|+++++.| .+|+ .++++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 467789999999999996543 34898766666 5 9999998654 799999999999999 8998 899999999
Q ss_pred EEEccC-CCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCc
Q 005875 135 VLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSN 211 (672)
Q Consensus 135 ~L~L~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 211 (672)
+|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|. ++|++|+|++|+|++.+|..|+++++|+.|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 999999999999999999999999999999999887 89999999999999999999999999999999999
Q ss_pred cccCCCCCC--CCC-CCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 212 NLSGSIPNF--DIP-KLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 212 ~l~~~~p~~--~l~-~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
+++|.+|.. .++ +|+.|+|++|+++|.+|..+..++ |..+
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 999988874 776 999999999999999999888775 5544
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.1e-25 Score=251.27 Aligned_cols=177 Identities=16% Similarity=0.210 Sum_probs=144.2
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---------hhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEE
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 450 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 450 (672)
.+.||+|+||+||+|... ++.+++|+....... .+.+.+|++++.++ +||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEE
Confidence 568999999999999654 678888886543221 23478999999999 9999997777777888889999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCC
Q 005875 451 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 530 (672)
Q Consensus 451 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 530 (672)
||+++|+|.++++. +..++.|++.||+|||+++ |+||||||+|||++. .+||+|||+++...
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999963 4579999999999999998 999999999999999 99999999998775
Q ss_pred CCC-----------CCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCC
Q 005875 531 VPA-----------TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQ 576 (672)
Q Consensus 531 ~~~-----------~~~~~~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el~tg~~pf~ 576 (672)
... ...+|+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 431 2347889999999987 668888999999999999888887774
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=1e-24 Score=254.96 Aligned_cols=189 Identities=24% Similarity=0.350 Sum_probs=157.6
Q ss_pred cccCChhHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCcceeeecCCCCeEEEEEeCCCCcccc---CCc-----------
Q 005875 60 AFADLNSDRQALLDFADAVPHL-RKLNWSSTNPICQSWVGINCTQDRTRVFGLRLPGIGLVGP---IPN----------- 124 (672)
Q Consensus 60 ~~~~~~~~~~al~~~~~~~~~~-~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~---~p~----------- 124 (672)
+..+.+.|++||++||+++.++ ...+|+.+.+|| .|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3445678999999999998544 344898666655 89999998 58999999999999987 543
Q ss_pred -----------cccCCCCCCcEEEccCCCcCCCCCC--cCCCCCCCcEEeeeccCCCCCCCCCcc---cccceeeccccc
Q 005875 125 -----------NTLGKLDALEVLSLRSNVLTGGLPS--EITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLDLSFNS 188 (672)
Q Consensus 125 -----------~~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L~~L~ls~N~ 188 (672)
..++.+++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+. ++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 3688999999999999999999998 999999999999999999999998762 789999999999
Q ss_pred CcccCCch---hhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 189 FTGNIPQS---IQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 189 l~~~~p~~---~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
|++..|.. +.++++|+.|+|++|.+++.+|...+++|++|+|++|.+++.+|. ++++++|+.+
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L 228 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHL 228 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEE
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEE
Confidence 99988877 788888888888888888877777788888888888888877776 7777766654
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=1.2e-24 Score=248.92 Aligned_cols=184 Identities=26% Similarity=0.458 Sum_probs=161.8
Q ss_pred hhHHHHHHHHHHhCCCCCC----------CCCCCCCCCCCCc---ceeeecCCCCeEEEEEeCCCCccccCCccccCCCC
Q 005875 65 NSDRQALLDFADAVPHLRK----------LNWSSTNPICQSW---VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLD 131 (672)
Q Consensus 65 ~~~~~al~~~~~~~~~~~~----------~~w~~~~~~c~~w---~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~ 131 (672)
..|+.||.++++++..... .+|+.+.++| .| .||.|+.. ++|++|+|+++++.|.+|+ .+++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 4699999999999854321 2698776666 89 99999865 8999999999999999998 899999
Q ss_pred CCcEEEccCCC---------------------------------------------------------------------
Q 005875 132 ALEVLSLRSNV--------------------------------------------------------------------- 142 (672)
Q Consensus 132 ~L~~L~L~~N~--------------------------------------------------------------------- 142 (672)
+|++|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999884
Q ss_pred ---------cCCCCCCcCCCCCCCcEEeeeccCCCCC-----------------CCCCcc----cccceeecccccCccc
Q 005875 143 ---------LTGGLPSEITSLPSLRYLYLQHNNFSGK-----------------IPSSFS----PQLVVLDLSFNSFTGN 192 (672)
Q Consensus 143 ---------l~g~~p~~~~~l~~L~~L~l~~N~l~g~-----------------~p~~~~----~~L~~L~ls~N~l~~~ 192 (672)
|+| +|.+|+++++|++|+|++|+|+|. +|..+. ++|++|+|++|+++|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 899999999999999999999986 898876 7899999999999999
Q ss_pred CCchhhhhccccceecCCcc-ccC-CCCCC--CC------CCCceEEeecCCCCCCCCc--ccCCCCCCcccc
Q 005875 193 IPQSIQNLTQLTGLSLQSNN-LSG-SIPNF--DI------PKLRHLNLSYNGLKGSIPS--SLQKFPNSSFVG 253 (672)
Q Consensus 193 ~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~--~l------~~L~~l~l~~N~l~g~~p~--~~~~~~~l~~~~ 253 (672)
+|..|+++++|+.|+|++|+ ++| .+|.. .+ ++|+.|+|++|+++ .+|. .++++++|..+.
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 99999999999999999998 998 77763 44 89999999999999 8998 898888887664
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=1.5e-24 Score=253.32 Aligned_cols=185 Identities=26% Similarity=0.470 Sum_probs=162.1
Q ss_pred CChhHHHHHHHHHHhCCCCCCCCCCCCC-----CC-CCCc------------ceeeecCCCCeEEEEEeCCCCccccCCc
Q 005875 63 DLNSDRQALLDFADAVPHLRKLNWSSTN-----PI-CQSW------------VGINCTQDRTRVFGLRLPGIGLVGPIPN 124 (672)
Q Consensus 63 ~~~~~~~al~~~~~~~~~~~~~~w~~~~-----~~-c~~w------------~gv~C~~~~~~v~~l~l~~~~l~g~~p~ 124 (672)
+...|+.||++||+++... +|+.++ ++ ||+| .||.|+. .+||+.|+|+++++.|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 3457999999999999654 786554 34 2599 9999986 58999999999999999998
Q ss_pred cccCCCCCCcEEEc-cCCCcCCC---------------------------------------------------------
Q 005875 125 NTLGKLDALEVLSL-RSNVLTGG--------------------------------------------------------- 146 (672)
Q Consensus 125 ~~~~~l~~L~~L~L-~~N~l~g~--------------------------------------------------------- 146 (672)
.|++|++|++|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 8999999999999 77766554
Q ss_pred -------------------CCCcCCCCCCCcEEeeeccCCCC-----------------CCCCCcc----cccceeeccc
Q 005875 147 -------------------LPSEITSLPSLRYLYLQHNNFSG-----------------KIPSSFS----PQLVVLDLSF 186 (672)
Q Consensus 147 -------------------~p~~~~~l~~L~~L~l~~N~l~g-----------------~~p~~~~----~~L~~L~ls~ 186 (672)
+|..|++|++|+.|+|++|+|+| .+|..++ ++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 88899999999999999999998 4898875 7999999999
Q ss_pred ccCcccCCchhhhhccccceecCCcc-ccC-CCCCC---------CCCCCceEEeecCCCCCCCCc--ccCCCCCCcccc
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNN-LSG-SIPNF---------DIPKLRHLNLSYNGLKGSIPS--SLQKFPNSSFVG 253 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~---------~l~~L~~l~l~~N~l~g~~p~--~~~~~~~l~~~~ 253 (672)
|++.|.+|..|++|++|+.|+|++|+ |+| .+|.. .+++|+.|+|++|+++ .+|. .++++++|..+.
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLD 579 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEE
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEE
Confidence 99999999999999999999999998 998 77742 4569999999999999 8998 898888887654
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.86 E-value=2.3e-22 Score=210.97 Aligned_cols=186 Identities=18% Similarity=0.316 Sum_probs=149.8
Q ss_pred ccCChhHHHHHHHHHHhCC-CCC--CCCCC----CCCCCCCCcceeeecC--------CCCeEEEEEeCCCCccccCCcc
Q 005875 61 FADLNSDRQALLDFADAVP-HLR--KLNWS----STNPICQSWVGINCTQ--------DRTRVFGLRLPGIGLVGPIPNN 125 (672)
Q Consensus 61 ~~~~~~~~~al~~~~~~~~-~~~--~~~w~----~~~~~c~~w~gv~C~~--------~~~~v~~l~l~~~~l~g~~p~~ 125 (672)
..+..+++.||++||.++. +.. ..+|. ...++| .|.|+.|.. ...+|+.|+|++|++. .+|+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~- 98 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD- 98 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-
Confidence 3466789999999999772 222 23783 334455 899999952 3468999999999998 8888
Q ss_pred ccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhh----
Q 005875 126 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQN---- 199 (672)
Q Consensus 126 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~---- 199 (672)
.++++++|++|+|++|.|+ .+|..++++++|++|+|++|+++ .+|..+. ++|++|+|++|++.+.+|..++.
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 6888999999999999999 89999999999999999999999 7888776 78999999998888888887765
Q ss_pred -----hccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 200 -----LTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 200 -----l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|++++ +|..++++++|..+.
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 888999999999888 56653 78888888888888884 666777777776553
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.86 E-value=2.5e-22 Score=234.79 Aligned_cols=161 Identities=35% Similarity=0.632 Sum_probs=122.7
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcC-----------------------------------
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEI----------------------------------- 151 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~----------------------------------- 151 (672)
.+..|+|++|.++|.+|. .++.+++|+.|+|++|.++|.+|..+
T Consensus 515 ~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 455666666666666666 56677777777777776666665433
Q ss_pred -----------------------------------CCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCC
Q 005875 152 -----------------------------------TSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP 194 (672)
Q Consensus 152 -----------------------------------~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p 194 (672)
+++++|+.|||++|+++|.+|..++ ++|+.|+|++|+|+|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 2345677777777777777777776 678888888888888888
Q ss_pred chhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcc--cCCCCCCccccCCCCCCCCCCCCCCC
Q 005875 195 QSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS--LQKFPNSSFVGNSLLCGPPLKACFPV 268 (672)
Q Consensus 195 ~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~n~~~~~~~l~~c~~~ 268 (672)
..|++|++|+.|+|++|+|+|.+|.. .+++|++|||++|+|+|.||.. +..++.+.|.||+++||.|+..|.+.
T Consensus 674 ~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 88888888888888888888888875 7888888888888888888864 66777888999999999988888543
No 259
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=7.6e-22 Score=202.14 Aligned_cols=150 Identities=19% Similarity=0.241 Sum_probs=118.9
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEeccccc-------------------ChhhHHHHHHHHHHHcCCCceeceEEEEE
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-------------------GKRDFEQQMEIVGRVGQHPNVVPLRAYYY 441 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-------------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 441 (672)
+.||+|+||.||+|...+++.||+|.++.... ....+.+|++++.++. | +++.+++.
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~---~-~~v~~~~~ 171 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---G-LAVPKVYA 171 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---T-SSSCCEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc---C-CCcCeEEe
Confidence 78999999999999997789999999864321 1345789999999994 4 56666554
Q ss_pred eCCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEe
Q 005875 442 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS 521 (672)
Q Consensus 442 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~ 521 (672)
. +..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+||+
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEEC
T ss_pred c-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEE
Confidence 3 56699999999999998 531 124469999999999999998 99999999999999 9999999
Q ss_pred ecCCCCCCCCCCCCCCCCcccCcccccC----------CCCCCccchhh
Q 005875 522 DFGLTPLMNVPATPSRSAGYRAPEVIET----------RKHSHKSDVYS 560 (672)
Q Consensus 522 DfGla~~~~~~~~~~~~~~y~aPE~~~~----------~~~~~~~DvwS 560 (672)
|||+|... ..|+|||++.. ..+...+|+|.
T Consensus 235 DFG~a~~~---------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 235 DFPQSVEV---------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CCTTCEET---------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred ECCCCeEC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99998643 34789998854 34555666664
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=4.3e-20 Score=185.91 Aligned_cols=151 Identities=25% Similarity=0.258 Sum_probs=127.3
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
.+..|+|++|++.+..+. .|+++++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|. ++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDA-TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCHh-HhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 467899999999865554 799999999999999999988888899999999999999999976666665 79999999
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCccc---cCCCCC
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLC 258 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~---~n~~~~ 258 (672)
++|+|++..+..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..+..+.++++|..+ +|+.-|
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 999999777777899999999999999999777743 78999999999999998777778777766544 555544
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.80 E-value=2.4e-20 Score=194.22 Aligned_cols=142 Identities=27% Similarity=0.420 Sum_probs=73.5
Q ss_pred EEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--c-c------
Q 005875 108 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--P-Q------ 178 (672)
Q Consensus 108 v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~-~------ 178 (672)
+..|+|++|++++.+|. .++++++|++|+|++|.+++.+|..|.++++|++|+|++|+++|.+|..+. + +
T Consensus 103 L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L 181 (313)
T 1ogq_A 103 LHYLYITHTNVSGAIPD-FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181 (313)
T ss_dssp CSEEEEEEECCEEECCG-GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEEC
T ss_pred CCEEECcCCeeCCcCCH-HHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEEC
Confidence 44455555555555554 455555555555555555555555555555555555555555544444433 1 3
Q ss_pred -----------------cceeecccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCC
Q 005875 179 -----------------LVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 179 -----------------L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p 240 (672)
|++|+|++|+|++.+|..|.++++|+.|+|++|++++.+|.. .+++|++|+|++|+++|.+|
T Consensus 182 ~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 261 (313)
T 1ogq_A 182 SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLP 261 (313)
T ss_dssp CSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCC
T ss_pred cCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCC
Confidence 445555555555555555555555555555555555544443 44555555555555555555
Q ss_pred cccCCCCCCc
Q 005875 241 SSLQKFPNSS 250 (672)
Q Consensus 241 ~~~~~~~~l~ 250 (672)
..+.++++|.
T Consensus 262 ~~l~~l~~L~ 271 (313)
T 1ogq_A 262 QGLTQLKFLH 271 (313)
T ss_dssp GGGGGCTTCC
T ss_pred hHHhcCcCCC
Confidence 5555444443
No 262
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.1e-19 Score=177.04 Aligned_cols=146 Identities=27% Similarity=0.371 Sum_probs=76.4
Q ss_pred CCCCCCCCCCcceeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc
Q 005875 86 WSSTNPICQSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 165 (672)
Q Consensus 86 w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 165 (672)
|......| +|.+|.|+... +. .+|. .+ .++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~~~~~~~C-s~~~v~c~~~~------------l~-~ip~-~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 12 ACPSQCSC-SGTTVDCRSKR------------HA-SVPA-GI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp CCCTTCEE-ETTEEECTTSC------------CS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCCCEE-eCCEeEccCCC------------cC-ccCC-CC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 44455556 89999997532 21 3443 12 145555555555555555555555555555555555
Q ss_pred CCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCc
Q 005875 166 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 241 (672)
Q Consensus 166 ~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~ 241 (672)
+|++..+..|. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 55433223332 45555555555555444444555555555555555555 33332 555555555555555544444
Q ss_pred ccCCCCCC
Q 005875 242 SLQKFPNS 249 (672)
Q Consensus 242 ~~~~~~~l 249 (672)
.|.++++|
T Consensus 154 ~~~~l~~L 161 (229)
T 3e6j_A 154 AFDRLSSL 161 (229)
T ss_dssp TTTTCTTC
T ss_pred HHhCCCCC
Confidence 44444433
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.78 E-value=1.5e-18 Score=169.37 Aligned_cols=146 Identities=26% Similarity=0.282 Sum_probs=113.2
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeec
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 164 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 164 (672)
|.|.+|.|+... .+++.|+|++|++++ +++..++.+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 489999997532 257788888888884 5554678888888888888888866666678888888888888
Q ss_pred cCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 165 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 165 N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
|++++..+..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|.+.+..|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 888865555554 68888888888888776777888888888888888888766653 67888888888887775443
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=6.3e-19 Score=173.67 Aligned_cols=146 Identities=20% Similarity=0.248 Sum_probs=96.0
Q ss_pred EEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCC-CcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeeccc
Q 005875 110 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 186 (672)
Q Consensus 110 ~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~ 186 (672)
.+++++++++ .+|. .+. ..+++|+|++|+|++..| ..|.++++|++|+|++|++++..|..|. ++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~-~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPE-HIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCcc-CCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4556666665 4665 232 345677777777775544 3366777777777777777765555555 6777777777
Q ss_pred ccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcc---ccCCCCCC
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLCG 259 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~---~~n~~~~~ 259 (672)
|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|++++..|..|..+++|.. .+|++.|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 7777666666777777777777777777666653 6677777777777777766766666655543 35555554
No 265
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.76 E-value=2.6e-18 Score=174.82 Aligned_cols=146 Identities=25% Similarity=0.286 Sum_probs=104.7
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
.++.|+|++|++++ +++..|+++++|++|+|++|.|+...+..|.++++|++|+|++|++++..+..|. ++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 35677777777774 4444677888888888888888754445567788888888888888755554444 67888888
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
++|+|++..|..|+++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..|.++++|..++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 888888777777778888888888888887655542 677888888888888766666677666666543
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=2.8e-18 Score=169.04 Aligned_cols=145 Identities=23% Similarity=0.302 Sum_probs=95.6
Q ss_pred EEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeeccccc
Q 005875 111 LRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNS 188 (672)
Q Consensus 111 l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~ 188 (672)
+++++++++ .+|. .+. ++|+.|+|++|+|++..|..|.++++|++|+|++|++++..|..|. ++|++|+|++|+
T Consensus 16 v~c~~~~l~-~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 334445555 4555 232 5677777777777765556677777777777777777766666665 677777777777
Q ss_pred CcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCc---cccCCCCCC
Q 005875 189 FTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLCG 259 (672)
Q Consensus 189 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~n~~~~~ 259 (672)
|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|++++..+..|..+++|. ..+|++.|.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 77555555677777777777777777666653 667777777777777766665566555544 345665554
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=6.7e-18 Score=166.31 Aligned_cols=143 Identities=22% Similarity=0.229 Sum_probs=127.0
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeec
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 164 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 164 (672)
|.|..|.|.... ..++.|+|++|++++ +++..|..+++|++|+|++|.|++..|..|.++++|++|+|++
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 479999997532 368999999999995 5555899999999999999999988899999999999999999
Q ss_pred cCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCC
Q 005875 165 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 165 N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 237 (672)
|+|++..+..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999955444454 89999999999999999999999999999999999999887763 79999999999999974
No 268
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=4.8e-18 Score=167.31 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=131.8
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeec
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 164 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 164 (672)
|.|..+.|+... ..++.|+|++|++++..|.+.|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 479999997532 24678999999999876766799999999999999999988888999999999999999
Q ss_pred cCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 165 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 165 N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
|++++..|..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999988777776 89999999999999999999999999999999999999987864 89999999999999987544
No 269
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=2.9e-18 Score=173.28 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=101.9
Q ss_pred hccccccCcEEEEEEEE-CCCcE--EEEEEecccccC-------------------------hhhHHHHHHHHHHHcCCC
Q 005875 380 AEVLGKGSYGTAYKAVL-EESTT--VVVKRLKEVVVG-------------------------KRDFEQQMEIVGRVGQHP 431 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~-~~~~~--vavK~l~~~~~~-------------------------~~~~~~e~~~l~~l~~h~ 431 (672)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+.++.++ .|+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 130 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEA 130 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhC
Confidence 36799999999999998 67888 999987543211 12578899999998 666
Q ss_pred ce--eceEEEEEeCCeeEEEEEecCC-C----chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcccC
Q 005875 432 NV--VPLRAYYYSKDEKLLVYDYFAS-G----SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH-SMGGPKFTHG 503 (672)
Q Consensus 432 ni--v~l~~~~~~~~~~~lV~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH-~~~~~~ivHr 503 (672)
++ +..+++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr 195 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHA 195 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence 53 444432 367899999942 4 66665431 224467789999999999999 888 9999
Q ss_pred CCCCCCEEecCCCCeEEeecCCCCCC
Q 005875 504 NIKASNVLINQDLDGCISDFGLTPLM 529 (672)
Q Consensus 504 DLk~~NILl~~~~~~kl~DfGla~~~ 529 (672)
||||+|||+++ .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999754
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.75 E-value=1.2e-17 Score=170.13 Aligned_cols=151 Identities=26% Similarity=0.307 Sum_probs=132.1
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
..+..|+|++|.+.+ ++ .++.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 468899999999986 43 699999999999999999988888899999999999999999977776665 7999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCccc---cCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLC 258 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~---~n~~~~ 258 (672)
|++|+|++..|..++++++|+.|+|++|++++.++.. .+++|+.|+|++|++++..|..+.++++|..+ +|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999888888999999999999999999877764 79999999999999998888778877776654 565554
Q ss_pred C
Q 005875 259 G 259 (672)
Q Consensus 259 ~ 259 (672)
.
T Consensus 220 ~ 220 (272)
T 3rfs_A 220 T 220 (272)
T ss_dssp C
T ss_pred c
Confidence 4
No 271
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.74 E-value=2.1e-17 Score=168.10 Aligned_cols=154 Identities=24% Similarity=0.278 Sum_probs=133.1
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++..|+|++|.++ .+|+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 61 ~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 46889999999998 67776789999999999999999977777889999999999999999987777765 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCc---cccCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 258 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~n~~~~ 258 (672)
|++|+|++..+..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..+..+..+++|. +.+|++.|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 9999999777777999999999999999999877753 789999999999999976666677666655 55777666
Q ss_pred CC
Q 005875 259 GP 260 (672)
Q Consensus 259 ~~ 260 (672)
.+
T Consensus 220 ~c 221 (270)
T 2o6q_A 220 TC 221 (270)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.73 E-value=3.5e-18 Score=179.03 Aligned_cols=144 Identities=26% Similarity=0.393 Sum_probs=126.6
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCc----------
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF---------- 175 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~---------- 175 (672)
.++..|+|++|+++ .+|. .++.+++|++|+|++|.|+ .+|..|+++++|++|+|++|++.+.+|..+
T Consensus 104 ~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp TTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 35788999999999 8887 7899999999999999999 889999999999999999999999999877
Q ss_pred -ccccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 176 -SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 176 -~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
.++|++|+|++|+|+ .+|..++++++|+.|+|++|++++.++.. .+++|+.|+|++|++.+.+|..++++++|..+.
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 478999999999999 88888999999999999999999755554 788999999999999999999888888877664
No 273
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=2.4e-17 Score=163.39 Aligned_cols=133 Identities=27% Similarity=0.231 Sum_probs=118.6
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
..++.|+|++|++++..|. .|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|. ++|++|+
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 5688999999999976666 899999999999999999866667789999999999999999976666665 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
|++|+|+ .+|..+.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+++..+
T Consensus 119 Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 119 MCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999999 88999999999999999999999777653 78999999999999986543
No 274
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.72 E-value=3.2e-18 Score=181.89 Aligned_cols=167 Identities=28% Similarity=0.260 Sum_probs=140.3
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccC-CCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeee
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLG-KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQ 163 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 163 (672)
|.|..+.|.... ..++.|+|++|++++..+ ..+. .+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~-~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRA-EWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECT-TSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccCh-hhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 478889997532 246789999999996444 4777 99999999999999998778889999999999999
Q ss_pred ccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC-----CCCCCceEEeecCCCC
Q 005875 164 HNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNLSYNGLK 236 (672)
Q Consensus 164 ~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-----~l~~L~~l~l~~N~l~ 236 (672)
+|+|++..+..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999976666665 89999999999999988999999999999999999999755542 5899999999999999
Q ss_pred CCCCcccCCCC-----CCccccCCCCCCCC
Q 005875 237 GSIPSSLQKFP-----NSSFVGNSLLCGPP 261 (672)
Q Consensus 237 g~~p~~~~~~~-----~l~~~~n~~~~~~~ 261 (672)
+..+..+..++ .|...+|++.|.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 65556666664 46777899888754
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.72 E-value=1.9e-17 Score=169.75 Aligned_cols=144 Identities=23% Similarity=0.197 Sum_probs=73.1
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCC-cCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
++..|+|++|.+.+..|. .|+.+++|++|+|++|. +++..|..|.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 57 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 57 NLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 345555555555543333 45555555555555554 4433345555555555555555555544444443 4555555
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 251 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 251 (672)
|++|+|++..+..|+++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..|..+.++++|..
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccE
Confidence 5555555444444555555555555555555433321 4455555555555555544555544444443
No 276
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=7.1e-17 Score=165.98 Aligned_cols=142 Identities=30% Similarity=0.312 Sum_probs=86.9
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
.++.|+|++|.+++..|. .|..+++|++|+|++|.|++. |.. +.+++|++|+|++|+++ .+|..+. ++|++|+|
T Consensus 32 ~l~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLA-TLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TCCEEECTTSCCSEEEGG-GGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCEEEcCCCcCCccCHH-HhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 466777777777654444 677777777777777777633 322 56666666666666666 5555443 56666666
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..+..|.++++|..+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 666666555566666666666666666666554442 56666666666666664434444555554433
No 277
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=8.7e-18 Score=161.80 Aligned_cols=127 Identities=27% Similarity=0.318 Sum_probs=111.7
Q ss_pred EEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCC-cCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeeccc
Q 005875 110 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 186 (672)
Q Consensus 110 ~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~ 186 (672)
.++++++++. .+|. .+.. +|++|+|++|+|++..|. .|+++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCcc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4667777775 7887 4443 899999999999976664 489999999999999999998898887 7999999999
Q ss_pred ccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
|+|++..|..|.++++|+.|+|++|+|++.+|.. .+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999999989999999999999999999988874 89999999999999998765
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=2.4e-17 Score=170.82 Aligned_cols=156 Identities=24% Similarity=0.298 Sum_probs=96.5
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCC--CCCCcCCCCCCCcEEee
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYL 162 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~l 162 (672)
|.|.+|.|+... ..++.|+|++|+++ .+|+..|+++++|++|+|++|.++. .+|..+.++++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 589999998632 36889999999998 6787678999999999999999873 23455555666666666
Q ss_pred eccCCCCCCCCCcc--cccceeecccccCcccCC-chhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCC
Q 005875 163 QHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP-QSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 163 ~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 237 (672)
++|.++ .+|..+. ++|++|+|++|++++..+ ..+.++++|+.|++++|.+++.+|.. .+++|+.|+|++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 666665 3444333 455555555555554333 34555555555555555555444432 44555555555555544
Q ss_pred -CCCcccCCCCCCcc
Q 005875 238 -SIPSSLQKFPNSSF 251 (672)
Q Consensus 238 -~~p~~~~~~~~l~~ 251 (672)
.+|..+.++++|..
T Consensus 165 ~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 165 NFLPDIFTELRNLTF 179 (306)
T ss_dssp GEECSCCTTCTTCCE
T ss_pred ccchhHHhhCcCCCE
Confidence 34444444444443
No 279
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.69 E-value=7.3e-17 Score=165.36 Aligned_cols=147 Identities=24% Similarity=0.233 Sum_probs=127.2
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccC-CCCCCCCCcc--ccccee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSFS--PQLVVL 182 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~--~~L~~L 182 (672)
..++.|+|++|++++ +++..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|. +++..|..+. ++|++|
T Consensus 32 ~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 368899999999986 444479999999999999999998889999999999999999997 7766577776 799999
Q ss_pred ecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 183 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 183 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
+|++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..+..+.++++|..++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 99999999888999999999999999999999777653 789999999999999976666788887776553
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.69 E-value=1.3e-17 Score=190.29 Aligned_cols=153 Identities=20% Similarity=0.218 Sum_probs=129.2
Q ss_pred ceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCC
Q 005875 97 VGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 167 (672)
Q Consensus 97 ~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 167 (672)
..|.|.... ..++.|+|++|.|+ .+|+..|.++++|++|||++|+|++..|..|.+|++|++|+|++|+|
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 357786422 36889999999999 56665899999999999999999977778899999999999999999
Q ss_pred CCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCC-CCCC--CCCCCceEEeecCCCCCCCCcc
Q 005875 168 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSS 242 (672)
Q Consensus 168 ~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--~l~~L~~l~l~~N~l~g~~p~~ 242 (672)
++..|..|. ++|++|+|++|+|++..+..|++|++|+.|+|++|++++. +|.. .+++|++|+|++|++++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 966666666 7999999999999987777899999999999999999864 4553 7899999999999999888887
Q ss_pred cCCCCCCc
Q 005875 243 LQKFPNSS 250 (672)
Q Consensus 243 ~~~~~~l~ 250 (672)
+..+.++.
T Consensus 193 l~~L~~l~ 200 (635)
T 4g8a_A 193 LRVLHQMP 200 (635)
T ss_dssp GHHHHTCT
T ss_pred ccchhhhh
Confidence 76655443
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.69 E-value=2e-16 Score=159.00 Aligned_cols=154 Identities=24% Similarity=0.318 Sum_probs=135.4
Q ss_pred CCCcceeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCC
Q 005875 93 CQSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIP 172 (672)
Q Consensus 93 c~~w~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 172 (672)
|..|.|+.|... ...+++++++++ .+|. .+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 4 Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~-~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 4 CETVTGCTCNEG---KKEVDCQGKSLD-SVPS-GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp CHHHHSSEEEGG---GTEEECTTCCCS-SCCS-CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CCCCCceEcCCC---CeEEecCCCCcc-ccCC-CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 558999999642 346899999998 7887 344 689999999999999888899999999999999999998888
Q ss_pred CCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCC
Q 005875 173 SSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPN 248 (672)
Q Consensus 173 ~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 248 (672)
..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..|+++++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 7776 89999999999999888889999999999999999999777763 7999999999999999777778888888
Q ss_pred Ccccc
Q 005875 249 SSFVG 253 (672)
Q Consensus 249 l~~~~ 253 (672)
|..++
T Consensus 157 L~~L~ 161 (251)
T 3m19_A 157 LQTLS 161 (251)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 87664
No 282
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=8.4e-17 Score=154.88 Aligned_cols=126 Identities=26% Similarity=0.278 Sum_probs=110.2
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeec
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 164 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 164 (672)
|.|..+.|+... ..++.|+|++|.+.+..+.+.++.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 479999997532 36789999999998655544589999999999999999998899999999999999999
Q ss_pred cCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCC
Q 005875 165 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN 219 (672)
Q Consensus 165 N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 219 (672)
|+|++..|..|. ++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999988887775 8999999999999999999999999999999999999987653
No 283
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.69 E-value=3.6e-16 Score=152.30 Aligned_cols=153 Identities=24% Similarity=0.300 Sum_probs=126.4
Q ss_pred eeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc-
Q 005875 98 GINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 176 (672)
Q Consensus 98 gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~- 176 (672)
+..|.. +.++.++++++ .+|.. ..++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.
T Consensus 4 ~C~C~~-----~~v~c~~~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 74 (208)
T 2o6s_A 4 RCSCSG-----TTVECYSQGRT-SVPTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK 74 (208)
T ss_dssp TCEEET-----TEEECCSSCCS-SCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred CCEECC-----CEEEecCCCcc-CCCCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCC
Confidence 456643 46788899887 67752 356899999999999977777789999999999999999966555555
Q ss_pred -cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcc--
Q 005875 177 -PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF-- 251 (672)
Q Consensus 177 -~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~-- 251 (672)
++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..+.++++|..
T Consensus 75 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEE
Confidence 89999999999999777778899999999999999999877763 7999999999999999777766777776654
Q ss_pred -ccCCCCCC
Q 005875 252 -VGNSLLCG 259 (672)
Q Consensus 252 -~~n~~~~~ 259 (672)
.+|+..|.
T Consensus 155 l~~N~~~~~ 163 (208)
T 2o6s_A 155 LHDNPWDCT 163 (208)
T ss_dssp CCSCCBCCC
T ss_pred ecCCCeecC
Confidence 46665543
No 284
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=1.5e-17 Score=186.84 Aligned_cols=156 Identities=23% Similarity=0.238 Sum_probs=136.3
Q ss_pred CcceeeecCC-----------CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeee
Q 005875 95 SWVGINCTQD-----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQ 163 (672)
Q Consensus 95 ~w~gv~C~~~-----------~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 163 (672)
.|.|+ |+.. ..+++.|+|++|++++..|. .|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 79998 8632 13689999999999976665 79999999999999999998888999999999999999
Q ss_pred ccCCCCCCCCCcc--cccceeecccccCcc-cCCchhhhhccccceecCCccccCCCCC--C-CCCCCceEEeecCCCCC
Q 005875 164 HNNFSGKIPSSFS--PQLVVLDLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 164 ~N~l~g~~p~~~~--~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~l~l~~N~l~g 237 (672)
+|++++..|..|. ++|++|+|++|+|++ .+|..++++++|+.|++++|++.+.+|. + .+++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 9999987776676 799999999999997 4678999999999999999996666663 2 88999999999999999
Q ss_pred CCCcccCCCCCCccc
Q 005875 238 SIPSSLQKFPNSSFV 252 (672)
Q Consensus 238 ~~p~~~~~~~~l~~~ 252 (672)
.+|..++++++|..+
T Consensus 163 ~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 163 YQSQSLKSIRDIHHL 177 (549)
T ss_dssp ECTTTTTTCSEEEEE
T ss_pred cChhhhhccccCceE
Confidence 999999888776544
No 285
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.68 E-value=6.1e-17 Score=167.72 Aligned_cols=140 Identities=23% Similarity=0.227 Sum_probs=79.1
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCC-CCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG-KIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~--~~L~~L~ 183 (672)
.+..|++++|.+.+..+...+..+++|++|+|++|.+++..|..+.++++|++|+|++|.+++ .+|..+. ++|++|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 345555555555543332345556666666666666655555555666666666666666654 3444444 4566666
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKF 246 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~ 246 (672)
|++|+|++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..|..+..+
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 6666666555556666666666666666665544321 45566666666666665555555544
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=2.4e-16 Score=160.43 Aligned_cols=134 Identities=30% Similarity=0.341 Sum_probs=120.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++..|+|++|.+++. ++..++.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+. ++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSL-PNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCCC-CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCcc-ChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 4688999999999954 444799999999999999999988888899999999999999999977776665 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
|++|+|++..|..|+++++|+.|+|++|++++.+|.. .+++|+.|+|++|.+++..|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999999888888999999999999999999988864 89999999999999987655
No 287
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.67 E-value=2.2e-16 Score=160.96 Aligned_cols=153 Identities=24% Similarity=0.254 Sum_probs=96.6
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCC-CCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG-KIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~--~~L~~L~ 183 (672)
++..|+|++|.+.+..+. .+.++++|++|+|++|.+++..+..++++++|++|+|++|++++ .+|..+. ++|++|+
T Consensus 77 ~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 77 HLSTLILTGNPIQSLALG-AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TCCEEECTTCCCCEECTT-TTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred CCCEEECCCCccCccChh-hhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 455666666666644333 56666666666666666665555556666666666666666664 2455555 5666666
Q ss_pred cccccCcccCCchhhhhcccc----ceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCc---cccCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLT----GLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNS 255 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~n~ 255 (672)
|++|+|++..+..+..+++|+ .|++++|.+++..+.. ...+|+.|+|++|++++..+..+.++++|. +.+|+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 666666666566666666666 5666666666555543 455788888888888866555566666554 45666
Q ss_pred CCCCC
Q 005875 256 LLCGP 260 (672)
Q Consensus 256 ~~~~~ 260 (672)
..|.+
T Consensus 236 ~~c~c 240 (276)
T 2z62_A 236 WDCSC 240 (276)
T ss_dssp BCCCT
T ss_pred ccccC
Confidence 66543
No 288
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.67 E-value=3.2e-17 Score=173.53 Aligned_cols=165 Identities=25% Similarity=0.243 Sum_probs=128.7
Q ss_pred CCCCCCCCCCcceeeecCC-----------CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCC
Q 005875 86 WSSTNPICQSWVGINCTQD-----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSL 154 (672)
Q Consensus 86 w~~~~~~c~~w~gv~C~~~-----------~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 154 (672)
|......| .|.|+ |+.. ...++.|+|++|++++ +|+..++++++|++|+|++|++++..|..|.++
T Consensus 23 ~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 23 SNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp ----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 44334445 79887 6521 1368899999999985 555579999999999999999998878889999
Q ss_pred CCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCC-chhhhhccccceecCCcc-ccCCCCCC--CCCCCceE
Q 005875 155 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP-QSIQNLTQLTGLSLQSNN-LSGSIPNF--DIPKLRHL 228 (672)
Q Consensus 155 ~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~-l~~~~p~~--~l~~L~~l 228 (672)
++|++|+|++|++++..+..+. ++|++|+|++|+|++..+ ..+.++++|+.|++++|+ +.+..|.. .+++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 9999999999999954443354 789999999999994433 478999999999999995 66554543 78899999
Q ss_pred EeecCCCCCCCCcccCCCCCCcccc
Q 005875 229 NLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 229 ~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
++++|++++..|..+.++++|..+.
T Consensus 180 ~l~~n~l~~~~~~~l~~l~~L~~L~ 204 (353)
T 2z80_A 180 EIDASDLQSYEPKSLKSIQNVSHLI 204 (353)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEE
T ss_pred ECCCCCcCccCHHHHhccccCCeec
Confidence 9999999988898888888776653
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.67 E-value=7.3e-17 Score=176.67 Aligned_cols=151 Identities=24% Similarity=0.335 Sum_probs=133.3
Q ss_pred Ccce--eeecCCC--------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCC-CcCCCCCCCcEEeee
Q 005875 95 SWVG--INCTQDR--------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQ 163 (672)
Q Consensus 95 ~w~g--v~C~~~~--------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~ 163 (672)
.|.+ |.|+... .+++.|+|++|.+.+..|. .|+++++|++|+|++|.+.+.+| ..|.++++|++|+|+
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4554 8887543 4689999999999976666 89999999999999999987774 679999999999999
Q ss_pred ccCCCCCCCCCcc--cccceeecccccCcccCCch--hhhhccccceecCCccccCCCCC--C-CCCCCceEEeecCCCC
Q 005875 164 HNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLK 236 (672)
Q Consensus 164 ~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~l~l~~N~l~ 236 (672)
+|++++..|..|. ++|++|+|++|++++.+|.. |+++++|+.|+|++|++++..|. . .+++|++|+|++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999988898887 89999999999999876665 99999999999999999998886 2 8999999999999999
Q ss_pred CCCCcccCCC
Q 005875 237 GSIPSSLQKF 246 (672)
Q Consensus 237 g~~p~~~~~~ 246 (672)
+..|..+.++
T Consensus 168 ~~~~~~l~~l 177 (455)
T 3v47_A 168 SICEEDLLNF 177 (455)
T ss_dssp CCCTTTSGGG
T ss_pred ccChhhhhcc
Confidence 9989888766
No 290
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.67 E-value=7.2e-17 Score=183.14 Aligned_cols=170 Identities=19% Similarity=0.164 Sum_probs=136.0
Q ss_pred CCCCCCCCCCCC---cceeeecCC----------------CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcC
Q 005875 84 LNWSSTNPICQS---WVGINCTQD----------------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT 144 (672)
Q Consensus 84 ~~w~~~~~~c~~---w~gv~C~~~----------------~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~ 144 (672)
.+|.++.+||.. |.++.|+.. -..+..++++++.+. .+|+..++.+++|++|+|++|.|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~ 88 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 88 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCC
Confidence 378776666654 655555410 023466788888876 677767899999999999999999
Q ss_pred CCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--
Q 005875 145 GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-- 220 (672)
Q Consensus 145 g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-- 220 (672)
+..|..|+++++|++|+|++|.+++..|..|. ++|++|+|++|+|++..+..|+++++|+.|+|++|.|++.+|..
T Consensus 89 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 168 (597)
T 3oja_B 89 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 168 (597)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTT
T ss_pred CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhh
Confidence 88888999999999999999999988777776 89999999999999666666899999999999999999988864
Q ss_pred CCCCCceEEeecCCCCCCCCcccCCCCCCccccC
Q 005875 221 DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 254 (672)
Q Consensus 221 ~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~n 254 (672)
.+++|+.|+|++|.+++..+..+.++..|...+|
T Consensus 169 ~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 169 ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred cCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 8999999999999999765455555555444444
No 291
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.67 E-value=1.4e-16 Score=175.71 Aligned_cols=158 Identities=22% Similarity=0.207 Sum_probs=136.8
Q ss_pred CcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc
Q 005875 95 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 165 (672)
Q Consensus 95 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 165 (672)
.|..|.|.... ..+..|+|++|++++..|. .|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 47889997532 3578999999999976555 8999999999999999999888999999999999999999
Q ss_pred CCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCc
Q 005875 166 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 241 (672)
Q Consensus 166 ~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~ 241 (672)
++++..+..|. ++|++|+|++|++++..|..|.++++|+.|+|++|++++..|.. .+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99965555555 89999999999999999999999999999999999999877754 889999999999999976666
Q ss_pred ccCCCCCCcccc
Q 005875 242 SLQKFPNSSFVG 253 (672)
Q Consensus 242 ~~~~~~~l~~~~ 253 (672)
.+.++++|..+.
T Consensus 171 ~l~~l~~L~~L~ 182 (477)
T 2id5_A 171 ALSHLHGLIVLR 182 (477)
T ss_dssp HHTTCTTCCEEE
T ss_pred HhcccCCCcEEe
Confidence 677777776553
No 292
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.67 E-value=1.9e-16 Score=162.73 Aligned_cols=149 Identities=28% Similarity=0.315 Sum_probs=115.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++..|+|++|.+++ ++. .+.+++|++|+|++|+|+ .+|..+.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 55 ~~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTK-LQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCE-EEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCc-ccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 467788888888874 444 378888888888888888 7788888888888888888888866666665 6888888
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCc---cccCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 258 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~n~~~~ 258 (672)
|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+++ .+|..+..+.+|. ..+|++.|
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 8888888777777888888888888888888655543 6888888888888888 6777666555544 45677666
Q ss_pred C
Q 005875 259 G 259 (672)
Q Consensus 259 ~ 259 (672)
.
T Consensus 210 ~ 210 (290)
T 1p9a_G 210 N 210 (290)
T ss_dssp S
T ss_pred c
Confidence 4
No 293
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.9e-16 Score=148.87 Aligned_cols=131 Identities=26% Similarity=0.303 Sum_probs=109.8
Q ss_pred CCcceeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCC
Q 005875 94 QSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS 173 (672)
Q Consensus 94 ~~w~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 173 (672)
|+|.++.|+. +++. .+|. .+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+.
T Consensus 7 C~~~~l~~~~------------~~l~-~~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 7 CSGTEIRCNS------------KGLT-SVPT-GI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EETTEEECCS------------SCCS-SCCT-TC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred eCCCEEEecC------------CCCc-cCCC-CC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 3677777754 4444 4664 22 37899999999999977777789999999999999999966666
Q ss_pred Ccc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 174 SFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 174 ~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
.|. ++|++|+|++|+|++..+..+.++++|+.|+|++|+|++.++.. .+++|++|+|++|++++..|
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 555 79999999999999888888999999999999999999776653 68999999999999997665
No 294
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.66 E-value=2.1e-16 Score=173.08 Aligned_cols=156 Identities=22% Similarity=0.215 Sum_probs=113.9
Q ss_pred CcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc
Q 005875 95 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 165 (672)
Q Consensus 95 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 165 (672)
.|..|.|.... ..++.|+|++|++++..|. .|+++++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQAD-TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHH-HcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 46788887532 3688999999999976565 8999999999999999999888899999999999999999
Q ss_pred CCCCCCCCCcc--cccceeecccccCcccCCchhhhhcc-------------------------ccceecCCccccCCCC
Q 005875 166 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ-------------------------LTGLSLQSNNLSGSIP 218 (672)
Q Consensus 166 ~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~-------------------------L~~L~l~~N~l~~~~p 218 (672)
++++..+..|. ++|++|+|++|+|++..+..|.++++ |+.|+|++|+|++. |
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c
Confidence 99966555565 78999999999988655545555444 44555555555433 2
Q ss_pred CC-CCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 219 NF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 219 ~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
.. .+++|+.|+|++|++++..|..|.++++|..+
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 22 55566666666666665556566655555443
No 295
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.66 E-value=8.6e-17 Score=172.59 Aligned_cols=169 Identities=20% Similarity=0.183 Sum_probs=129.7
Q ss_pred CCCCCCCCCCCcceeeecCC-------------------CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCC
Q 005875 85 NWSSTNPICQSWVGINCTQD-------------------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG 145 (672)
Q Consensus 85 ~w~~~~~~c~~w~gv~C~~~-------------------~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g 145 (672)
+|....+||+.|.+..|... -..+..+++.++.+. .+|+..+..+++|++|+|++|.+++
T Consensus 5 ~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~ 83 (390)
T 3o6n_A 5 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 83 (390)
T ss_dssp --CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCE
T ss_pred CCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccc
Confidence 68776677766555544211 034567888888877 6887678999999999999999997
Q ss_pred CCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--C
Q 005875 146 GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--D 221 (672)
Q Consensus 146 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~ 221 (672)
..|..|.++++|++|+|++|++++..|..|. ++|++|+|++|+|+...+..|+++++|+.|+|++|++++..|.. .
T Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 163 (390)
T 3o6n_A 84 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA 163 (390)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS
T ss_pred cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccC
Confidence 7778999999999999999999988777776 79999999999999554555799999999999999999887763 8
Q ss_pred CCCCceEEeecCCCCCCCCcccCCCCCCccccC
Q 005875 222 IPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 254 (672)
Q Consensus 222 l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~n 254 (672)
+++|+.|++++|++++.-...+.++..+...+|
T Consensus 164 l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 164 TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp CTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCCEEECCCCcCCccccccccccceeecccc
Confidence 899999999999999654344444444444443
No 296
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.66 E-value=1.8e-16 Score=187.14 Aligned_cols=86 Identities=30% Similarity=0.334 Sum_probs=64.0
Q ss_pred cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCccccCCC
Q 005875 177 PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGNSL 256 (672)
Q Consensus 177 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~n~~ 256 (672)
++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+|....++|+.|+|++|++++.+|..+.++..+.+.+|++
T Consensus 480 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~ 559 (844)
T 3j0a_A 480 SHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKF 559 (844)
T ss_dssp CCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECC
T ss_pred ccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCc
Confidence 35566666666666666666777777777777777777665554347788888888888888888888888888999999
Q ss_pred CCCCCC
Q 005875 257 LCGPPL 262 (672)
Q Consensus 257 ~~~~~l 262 (672)
.|.+++
T Consensus 560 ~C~c~~ 565 (844)
T 3j0a_A 560 ICECEL 565 (844)
T ss_dssp CCSSSC
T ss_pred cccccc
Confidence 997654
No 297
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.65 E-value=1.3e-16 Score=174.79 Aligned_cols=130 Identities=22% Similarity=0.254 Sum_probs=115.0
Q ss_pred CCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceec
Q 005875 131 DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSL 208 (672)
Q Consensus 131 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 208 (672)
++|++|+|++|.+++.+|..|+++++|+.|+|++|++++..|..|. ++|++|+|++|+|++..|..|+++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 6899999999999999999999999999999999999988888886 89999999999999888999999999999999
Q ss_pred CCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCc---cccCCCCCCC
Q 005875 209 QSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLCGP 260 (672)
Q Consensus 209 ~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~n~~~~~~ 260 (672)
++|++++..|.. .+++|++|+|++|++++..+..+..+++|. ..+|+..|.+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999887764 899999999999999976666677777665 4466665544
No 298
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.65 E-value=4e-17 Score=186.54 Aligned_cols=132 Identities=17% Similarity=0.314 Sum_probs=119.0
Q ss_pred CccccCCccccCCCCCCcEEEccCCCcCCC-----------------CCCcCC--CCCCCcEEeeeccCCCCCCCCCcc-
Q 005875 117 GLVGPIPNNTLGKLDALEVLSLRSNVLTGG-----------------LPSEIT--SLPSLRYLYLQHNNFSGKIPSSFS- 176 (672)
Q Consensus 117 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~g~~p~~~~- 176 (672)
+++| +|+ .++++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++.|.+|..+.
T Consensus 194 ~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 194 NITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp EEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4556 887 799999999999999999986 999999 999999999999999999999887
Q ss_pred -cccceeeccccc-Ccc-cCCchhhhh------ccccceecCCccccCCCCC--C--CCCCCceEEeecCCCCCCCCccc
Q 005875 177 -PQLVVLDLSFNS-FTG-NIPQSIQNL------TQLTGLSLQSNNLSGSIPN--F--DIPKLRHLNLSYNGLKGSIPSSL 243 (672)
Q Consensus 177 -~~L~~L~ls~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~--~l~~L~~l~l~~N~l~g~~p~~~ 243 (672)
++|++|+|++|+ |+| .+|..++++ ++|+.|+|++|+++ .+|. . .+++|+.|+|++|+++|.+| .+
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 799999999998 999 899999988 99999999999999 7776 3 89999999999999999999 88
Q ss_pred CCCCCCccc
Q 005875 244 QKFPNSSFV 252 (672)
Q Consensus 244 ~~~~~l~~~ 252 (672)
+++++|..+
T Consensus 350 ~~l~~L~~L 358 (636)
T 4eco_A 350 GSEIKLASL 358 (636)
T ss_dssp EEEEEESEE
T ss_pred CCCCCCCEE
Confidence 777766654
No 299
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.65 E-value=1.6e-16 Score=161.98 Aligned_cols=143 Identities=21% Similarity=0.192 Sum_probs=121.8
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
.++.|+|++|++++..+. .|+++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|. ++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSY-SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTT-TTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccCHh-HhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 588999999999865444 799999999999999999977777899999999999999999977777776 79999999
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCC-CCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 250 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 250 (672)
++|++++..+..++++++|+.|+|++|++++. +|.. .+++|+.|+|++|++++..+..+..+.++.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 99999987777899999999999999999873 4653 789999999999999977777666555443
No 300
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.65 E-value=1.5e-16 Score=180.90 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=133.1
Q ss_pred ceeeecCC---------CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCC
Q 005875 97 VGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 167 (672)
Q Consensus 97 ~gv~C~~~---------~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 167 (672)
..|.|... ..+++.|+|++|.+++..+. .|+++++|++|+|++|.+++..|..|+++++|++|+|++|++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSY-SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChh-hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 35777642 24689999999999966555 799999999999999999988899999999999999999999
Q ss_pred CCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccC-CCCCC--CCCCCceEEeecCCCCCCCCcc
Q 005875 168 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG-SIPNF--DIPKLRHLNLSYNGLKGSIPSS 242 (672)
Q Consensus 168 ~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~--~l~~L~~l~l~~N~l~g~~p~~ 242 (672)
++..|..|. ++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|.. .+++|++|+|++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 988898887 899999999999998888899999999999999999986 56764 8999999999999999888887
Q ss_pred cCCCCCC
Q 005875 243 LQKFPNS 249 (672)
Q Consensus 243 ~~~~~~l 249 (672)
++.+.+|
T Consensus 173 ~~~l~~L 179 (606)
T 3vq2_A 173 LQFLREN 179 (606)
T ss_dssp THHHHHC
T ss_pred hhhhhcc
Confidence 7765544
No 301
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=1.7e-16 Score=149.06 Aligned_cols=133 Identities=26% Similarity=0.258 Sum_probs=109.4
Q ss_pred CeEEEEEeCCCCcc-ccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--ccccee
Q 005875 106 TRVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 182 (672)
Q Consensus 106 ~~v~~l~l~~~~l~-g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 182 (672)
..++.|+|++|+++ +.+|. .+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+. ++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 46788999999988 78887 688899999999999999865 6788999999999999999977776664 789999
Q ss_pred ecccccCcccC-CchhhhhccccceecCCccccCCCC----CC-CCCCCceEEeecCCCCCCCCcc
Q 005875 183 DLSFNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIP----NF-DIPKLRHLNLSYNGLKGSIPSS 242 (672)
Q Consensus 183 ~ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p----~~-~l~~L~~l~l~~N~l~g~~p~~ 242 (672)
+|++|+|++.. +..+.++++|+.|+|++|.+++..+ .. .+++|++|++++|.+. .+|+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999998642 2788889999999999999987766 22 7889999999999887 45543
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.65 E-value=4.3e-16 Score=170.58 Aligned_cols=155 Identities=23% Similarity=0.196 Sum_probs=105.0
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCC------------
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS------------ 174 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~------------ 174 (672)
++..|+|++|++++..|. .|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..
T Consensus 100 ~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 100 HLEVLQLGRNSIRQIEVG-AFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCCcChh-hccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 455666666666543333 5666666666666666665444444555555555555555554222211
Q ss_pred -----------------------------------cc--cccceeecccccCcccCCchhhhhccccceecCCccccCCC
Q 005875 175 -----------------------------------FS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSI 217 (672)
Q Consensus 175 -----------------------------------~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (672)
+. ++|++|+|++|+|++..|..|.++++|+.|+|++|++++..
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 258 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIE 258 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceEC
Confidence 11 46777788888888878888999999999999999998877
Q ss_pred CCC--CCCCCceEEeecCCCCCCCCcccCCCCCC---ccccCCCCCCCCC
Q 005875 218 PNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS---SFVGNSLLCGPPL 262 (672)
Q Consensus 218 p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l---~~~~n~~~~~~~l 262 (672)
|.. .+++|+.|+|++|++++..+..+..+++| .+.+|++.|.+.+
T Consensus 259 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 259 RNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred HHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 764 78999999999999997777667666655 4568888887653
No 303
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.65 E-value=5.9e-17 Score=187.33 Aligned_cols=178 Identities=20% Similarity=0.278 Sum_probs=110.5
Q ss_pred CChhHHHHHHHHHHhCC---CCCCCCCCCCCCCCCCcceeeecCCCCeEEEEEeCCC------------------Cccc-
Q 005875 63 DLNSDRQALLDFADAVP---HLRKLNWSSTNPICQSWVGINCTQDRTRVFGLRLPGI------------------GLVG- 120 (672)
Q Consensus 63 ~~~~~~~al~~~~~~~~---~~~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~------------------~l~g- 120 (672)
..+.++.+|+++..+.. ......|......+.+|.++.++. .+++.|+|.++ .+.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 34567889999987662 122235655555555898887765 34555554333 3322
Q ss_pred -------cCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcc
Q 005875 121 -------PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG 191 (672)
Q Consensus 121 -------~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~ 191 (672)
.++++.+..+.+|+.|+|++|.|. .+|..+.++++|++|+|++|+|+ .+|..|. ++|++|+|++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 133446888899999999999998 78888889999999999999999 8888776 78999999999999
Q ss_pred cCCchhhhhccccceecCCccccCCCCC-C-CCCCCceEEeecCCCCCCCCcccCCC
Q 005875 192 NIPQSIQNLTQLTGLSLQSNNLSGSIPN-F-DIPKLRHLNLSYNGLKGSIPSSLQKF 246 (672)
Q Consensus 192 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~l~l~~N~l~g~~p~~~~~~ 246 (672)
.+|..|++|++|+.|+|++|.|+ .+|. + .+++|+.|+|++|.|+|.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 78999999999999999999997 5554 3 88899999999999998888776543
No 304
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.65 E-value=5.6e-16 Score=162.30 Aligned_cols=145 Identities=20% Similarity=0.255 Sum_probs=119.3
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeec
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 164 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 164 (672)
|.|..+.|+... ..++.|+|++|++++. ++..|+++++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEI-KDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCB-CTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEe-ChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 479999997521 3578899999999964 444799999999999999999988899999999999999999
Q ss_pred cCCCCCCCCCcccccceeecccccCcccCCchhhhhccccceecCCccccC--CCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 165 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 165 N~l~g~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
|+++ .+|..+.++|++|++++|++++..+..|.++++|+.|++++|.++. ..+.. .+++|+.|++++|.++. +|
T Consensus 110 n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~ 187 (330)
T 1xku_A 110 NQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IP 187 (330)
T ss_dssp SCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CC
T ss_pred CcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CC
Confidence 9999 7888888899999999999997777778888888888888888863 44432 56777777777777663 44
Q ss_pred c
Q 005875 241 S 241 (672)
Q Consensus 241 ~ 241 (672)
.
T Consensus 188 ~ 188 (330)
T 1xku_A 188 Q 188 (330)
T ss_dssp S
T ss_pred c
Confidence 3
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.64 E-value=1.4e-16 Score=181.05 Aligned_cols=143 Identities=24% Similarity=0.208 Sum_probs=75.1
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCC-CcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
++..|+|++|.+.+ +|. .+..+++|+.|+|++|.+++..| ..+.++++|++|++++|++++.+|..+. ++|++|+
T Consensus 377 ~L~~L~L~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 454 (606)
T 3vq2_A 377 SLRHLDLSFNGAII-MSA-NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLK 454 (606)
T ss_dssp CCCEEECCSCSEEE-ECC-CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred cccEeECCCCcccc-chh-hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEE
Confidence 44555666665553 443 45555555555555555555544 4455555555555555555555554443 4555555
Q ss_pred cccccCcc-cCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcc
Q 005875 184 LSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 251 (672)
Q Consensus 184 ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 251 (672)
|++|++++ .+|..|+++++|+.|+|++|++++.+|.. .+++|+.|+|++|++++.+|..+.++++|..
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 55555554 24555555555555555555555544432 4555555555555555544555554444443
No 306
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.64 E-value=2.1e-16 Score=179.58 Aligned_cols=154 Identities=19% Similarity=0.108 Sum_probs=137.3
Q ss_pred cceeeecCC---------CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccC
Q 005875 96 WVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN 166 (672)
Q Consensus 96 w~gv~C~~~---------~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 166 (672)
+..+.|... ...++.|+|++|.+++..|. .|+++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNT-TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTT-TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChh-HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 556888652 24689999999999966565 89999999999999999998889999999999999999999
Q ss_pred CCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCC-CCCC-CCCCCceEEeecCCCCCCCCcc
Q 005875 167 FSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF-DIPKLRHLNLSYNGLKGSIPSS 242 (672)
Q Consensus 167 l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~-~l~~L~~l~l~~N~l~g~~p~~ 242 (672)
+++..|..|. ++|++|+|++|+|++..|..++++++|++|+|++|++++. +|.. .+++|+.|+|++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9988898887 8999999999999987788999999999999999999984 4554 8999999999999999888888
Q ss_pred cCCCCCCc
Q 005875 243 LQKFPNSS 250 (672)
Q Consensus 243 ~~~~~~l~ 250 (672)
++.+++|.
T Consensus 173 ~~~l~~L~ 180 (606)
T 3t6q_A 173 MSSLQQAT 180 (606)
T ss_dssp HHTTTTCC
T ss_pred hhhhcccc
Confidence 88888776
No 307
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.63 E-value=7.7e-16 Score=161.39 Aligned_cols=157 Identities=21% Similarity=0.267 Sum_probs=128.3
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeec
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 164 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 164 (672)
|.|..+.|+... ..++.|+|++|++.+..|. .|+++++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKD-DFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHh-HhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 479999997532 3678999999999865554 899999999999999999988899999999999999999
Q ss_pred cCCCCCCCCCcccccceeecccccCcccCCchhhhhccccceecCCccccC--CCCCC--CCCCCceEEeecCCCCCCCC
Q 005875 165 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 165 N~l~g~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
|+++ .+|..+.++|++|+|++|+|++..+..|.++++|+.|++++|.++. ..|.. .+ +|+.|++++|++++ +|
T Consensus 112 n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 112 NHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp SCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 9999 7888888999999999999997777789999999999999999963 44443 34 77788888887774 45
Q ss_pred ccc-CCCCCCccccC
Q 005875 241 SSL-QKFPNSSFVGN 254 (672)
Q Consensus 241 ~~~-~~~~~l~~~~n 254 (672)
..+ .++..|...+|
T Consensus 189 ~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 189 KDLPETLNELHLDHN 203 (332)
T ss_dssp SSSCSSCSCCBCCSS
T ss_pred ccccCCCCEEECCCC
Confidence 433 34455554444
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.63 E-value=8.7e-16 Score=167.58 Aligned_cols=155 Identities=26% Similarity=0.275 Sum_probs=115.7
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcC-------------------------CCCCCCcEE
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEI-------------------------TSLPSLRYL 160 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~-------------------------~~l~~L~~L 160 (672)
.++..|+|++|+++ .+|++.|..+++|++|+|++|.|++..+..| .++++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 46778888888887 4555578888888888888887774444344 445555555
Q ss_pred eeeccCCCCCCCCCcc-cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCC
Q 005875 161 YLQHNNFSGKIPSSFS-PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 161 ~l~~N~l~g~~p~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 237 (672)
+|++|+++ .+|.... ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++
T Consensus 191 ~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 191 NLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred cCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 55555555 3343111 67888999999999888899999999999999999999877764 88999999999999997
Q ss_pred CCCcccCCCCCC---ccccCCCCCCCCC
Q 005875 238 SIPSSLQKFPNS---SFVGNSLLCGPPL 262 (672)
Q Consensus 238 ~~p~~~~~~~~l---~~~~n~~~~~~~l 262 (672)
..+..|..+++| ...+|++.|.+.+
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred cChhHhccccCCCEEEcCCCCccCCCCc
Confidence 777777766655 4568888887643
No 309
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.63 E-value=2.3e-16 Score=157.26 Aligned_cols=142 Identities=16% Similarity=0.187 Sum_probs=112.3
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCC-cCCCCCCcCCCCCCCcEEeeec-cCCCCCCCCCcc--cccce
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVV 181 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~--~~L~~ 181 (672)
..++.|+|++|++++ +|+..|+.+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..|..|. ++|++
T Consensus 31 ~~l~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSE-ECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceE-ECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 368889999999984 555579999999999999997 8855566889999999999998 999966556665 78999
Q ss_pred eecccccCcccCCchhhhhcccc---ceecCCc-cccCCCCCC--CCCCCc-eEEeecCCCCCCCCcccCCCCCCcc
Q 005875 182 LDLSFNSFTGNIPQSIQNLTQLT---GLSLQSN-NLSGSIPNF--DIPKLR-HLNLSYNGLKGSIPSSLQKFPNSSF 251 (672)
Q Consensus 182 L~ls~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~--~l~~L~-~l~l~~N~l~g~~p~~~~~~~~l~~ 251 (672)
|+|++|+|++ +|. |.++++|+ .|++++| ++++..+.. .+++|+ .|++++|+++ .+|......++|..
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~ 183 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDA 183 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEE
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCE
Confidence 9999999986 676 88888888 9999999 888666653 788888 9999999988 56654332244443
No 310
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=146.50 Aligned_cols=123 Identities=30% Similarity=0.379 Sum_probs=108.4
Q ss_pred EEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccc
Q 005875 110 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFN 187 (672)
Q Consensus 110 ~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N 187 (672)
.++++++++. .+|.+ + ..+|++|+|++|.|+ .+|..|.++++|+.|+|++|++++..|..|. ++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4667777877 78863 4 368999999999999 8889999999999999999999987777776 89999999999
Q ss_pred cCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCC
Q 005875 188 SFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 188 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 237 (672)
+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999888889999999999999999999766653 78999999999999874
No 311
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1.3e-16 Score=176.15 Aligned_cols=135 Identities=19% Similarity=0.137 Sum_probs=71.5
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc---cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L~~L~ 183 (672)
.+..|+|++|.+++..+. .+++|+.|+|++|.|++..|..++++++|++|+|++|.+++.+|..+. ++|++|+
T Consensus 100 ~L~~L~L~~N~l~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 100 SIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TCCEEECCSSCCCCEEEC----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECcCCcCCCCCcc----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 344555555555543221 245555556666655555555555555556666666655555555443 4555555
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPN 248 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 248 (672)
|++|.|++..+ +..+++|+.|+|++|.|++.+|.+ .+++|+.|+|++|.|++ +|..+..+++
T Consensus 176 Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~ 238 (487)
T 3oja_A 176 LQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQN 238 (487)
T ss_dssp CTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTT
T ss_pred cCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCC
Confidence 55555554422 223555555555555555544443 45555555555555553 4444444433
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.62 E-value=1.5e-16 Score=165.38 Aligned_cols=144 Identities=22% Similarity=0.257 Sum_probs=80.1
Q ss_pred eEEEEEeCCCCccccCCcccc-CCCCCCcEEEccCCCcCCCCCCcCCCC-----CCCcEEeeeccCCCCCCCCCcc--cc
Q 005875 107 RVFGLRLPGIGLVGPIPNNTL-GKLDALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS--PQ 178 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~-~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~--~~ 178 (672)
++..|+|++|+++|.+|...+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|. ++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 455666666666666665321 6666666666666666655 5555555 6666666666666655555554 56
Q ss_pred cceeecccccCccc--CCchh--hhhccccceecCCccccCC--CCC-C--CCCCCceEEeecCCCCCCCC-cccCCCCC
Q 005875 179 LVVLDLSFNSFTGN--IPQSI--QNLTQLTGLSLQSNNLSGS--IPN-F--DIPKLRHLNLSYNGLKGSIP-SSLQKFPN 248 (672)
Q Consensus 179 L~~L~ls~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~--~p~-~--~l~~L~~l~l~~N~l~g~~p-~~~~~~~~ 248 (672)
|++|+|++|+++|. +|..+ +++++|+.|+|++|+|++. ++. . .+++|+.|+|++|++++.+| ..+..+++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 66666666666554 23333 5566666666666666531 111 1 45566666666666665554 23333444
Q ss_pred Ccc
Q 005875 249 SSF 251 (672)
Q Consensus 249 l~~ 251 (672)
|+.
T Consensus 255 L~~ 257 (312)
T 1wwl_A 255 LNS 257 (312)
T ss_dssp CCE
T ss_pred CCE
Confidence 433
No 313
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=2e-16 Score=184.84 Aligned_cols=144 Identities=22% Similarity=0.355 Sum_probs=131.5
Q ss_pred CeEEEEEeCCCCccc-----------------cCCccccC--CCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccC
Q 005875 106 TRVFGLRLPGIGLVG-----------------PIPNNTLG--KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN 166 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g-----------------~~p~~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 166 (672)
.++..|+|++|.++| .+|+ .++ +|++|++|+|++|++.|.+|..|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 468899999999998 4998 677 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCCCcc--c-------ccceeecccccCcccCCc--hhhhhccccceecCCccccCCCCCC-CCCCCceEEeec
Q 005875 167 -FSG-KIPSSFS--P-------QLVVLDLSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSY 232 (672)
Q Consensus 167 -l~g-~~p~~~~--~-------~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~ 232 (672)
++| .+|..+. + +|++|+|++|+|+ .+|. .|+++++|+.|+|++|+|+ .+|.+ .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 998 8998765 3 8999999999999 8999 9999999999999999999 77765 889999999999
Q ss_pred CCCCCCCCcccCCCCC-Ccccc
Q 005875 233 NGLKGSIPSSLQKFPN-SSFVG 253 (672)
Q Consensus 233 N~l~g~~p~~~~~~~~-l~~~~ 253 (672)
|+++ .+|..+.++++ |..+.
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEE
T ss_pred Cccc-cchHHHhhccccCCEEE
Confidence 9999 89998888777 76553
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.61 E-value=6.4e-16 Score=182.45 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=127.8
Q ss_pred CcceeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCC-CCcCCCCCCCcEEeeeccCCCCCCCC
Q 005875 95 SWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGL-PSEITSLPSLRYLYLQHNNFSGKIPS 173 (672)
Q Consensus 95 ~w~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~p~ 173 (672)
+|..|.+ ...+++.|+|++|.+++..|. .|+++++|++|+|++|.+.+.+ |..|.+|++|++|+|++|++++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 5666665 345788999999999876665 7999999999999999877777 77899999999999999999988898
Q ss_pred Ccc--cccceeecccccCcccCCch--hhhhccccceecCCccccCCCCC--C-CCCCCceEEeecCCCCCCCCcccCCC
Q 005875 174 SFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQKF 246 (672)
Q Consensus 174 ~~~--~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~l~l~~N~l~g~~p~~~~~~ 246 (672)
.|. ++|++|+|++|++++.+|.. |++|++|+.|+|++|.+++..+. + .+++|++|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 887 79999999999999877766 89999999999999999987664 2 89999999999999998888877544
No 315
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.61 E-value=8.2e-16 Score=171.78 Aligned_cols=150 Identities=25% Similarity=0.362 Sum_probs=122.9
Q ss_pred CCCCCCCCCC----Cccee-eecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcE
Q 005875 85 NWSSTNPICQ----SWVGI-NCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRY 159 (672)
Q Consensus 85 ~w~~~~~~c~----~w~gv-~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 159 (672)
+|..+..+|. .|.|+ .|.. .+++.|+|++|++++ +|. .+ +++|++|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~-~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPD-NL--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCS-CC--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCH-hH--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 5665556663 49999 7864 468899999999996 887 34 388999999999999 788 56899999
Q ss_pred EeeeccCCCCCCCCCcccccceeecccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCC
Q 005875 160 LYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSI 239 (672)
Q Consensus 160 L~l~~N~l~g~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~ 239 (672)
|+|++|+|++ +|. +..+|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +
T Consensus 105 L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp EECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-C
T ss_pred EEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-c
Confidence 9999999997 888 77899999999999997 776 68999999999999997 555 78899999999999997 7
Q ss_pred CcccC-CCCCCccccC
Q 005875 240 PSSLQ-KFPNSSFVGN 254 (672)
Q Consensus 240 p~~~~-~~~~l~~~~n 254 (672)
|. |. ++..|...+|
T Consensus 176 p~-l~~~L~~L~Ls~N 190 (571)
T 3cvr_A 176 PE-LPESLEALDVSTN 190 (571)
T ss_dssp CC-CCTTCCEEECCSS
T ss_pred ch-hhCCCCEEECcCC
Confidence 77 54 3333334444
No 316
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.61 E-value=9.5e-16 Score=148.06 Aligned_cols=139 Identities=19% Similarity=0.342 Sum_probs=118.2
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
+++.|++++|++. .+| .+..+++|++|+|++|.++ .+..+.++++|++|+|++|++++..|..+. ++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 5788999999998 677 4899999999999999775 334799999999999999999987888877 79999999
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
++|++++..|..++++++|+.|+|++|.+.+.+|.. .+++|+.|++++|++++ ++ .+..+++|..+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L 186 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQL 186 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEE
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEE
Confidence 999999989999999999999999999833455554 89999999999999996 44 56666666554
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=4.7e-16 Score=176.78 Aligned_cols=143 Identities=24% Similarity=0.229 Sum_probs=108.0
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCc-CCCCCCCcEEeeeccCCCCCCCCCcc--ccccee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-ITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 182 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 182 (672)
.++..|++++|.+.+..|. .++.+++|++|+|++|.+++..|.. +.++++|+.|+|++|.+++..|..+. ++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 4677788888888766665 6888888888888888887776644 77888888888888888877777665 678888
Q ss_pred ecccccCccc---CCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCC
Q 005875 183 DLSFNSFTGN---IPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS 249 (672)
Q Consensus 183 ~ls~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 249 (672)
+|++|+|++. .+..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++..|..+.+++.|
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 8888887762 3356777888888888888887776653 67778888888888877777777777766
No 318
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.4e-16 Score=143.86 Aligned_cols=122 Identities=26% Similarity=0.281 Sum_probs=79.5
Q ss_pred eEEEEEeCCCCcc-ccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~-g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
+++.|++++|+++ +.+|. .++.+++|++|+|++|.+++. ..++++++|++|+|++|++++.+|..+. ++|++|+
T Consensus 18 ~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred cCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 4566777777776 66665 567777777777777777654 5566777777777777777765665543 5677777
Q ss_pred cccccCccc-CCchhhhhccccceecCCccccCCCC---C-C-CCCCCceEEee
Q 005875 184 LSFNSFTGN-IPQSIQNLTQLTGLSLQSNNLSGSIP---N-F-DIPKLRHLNLS 231 (672)
Q Consensus 184 ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~-~-~l~~L~~l~l~ 231 (672)
|++|+|++. .|..++++++|+.|++++|++++..+ . . .+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777652 33666667777777777777765544 1 1 56666666654
No 319
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.61 E-value=1.5e-15 Score=171.13 Aligned_cols=151 Identities=23% Similarity=0.322 Sum_probs=126.5
Q ss_pred CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCC--CCCCcCCCCCCCcEEeeeccCCCCCCCCCcc---ccc
Q 005875 105 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQL 179 (672)
Q Consensus 105 ~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L 179 (672)
-..++.|+|++|.+++.+|. .++.+++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.... ++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 35788999999999988887 79999999999999999996 4467799999999999999999987776533 799
Q ss_pred ceeecccccCcccCCchhhhhccccceecCCccccCCCCC-C-CCCCCceEEeecCCCCCCCCcc-cCCCCCCc---ccc
Q 005875 180 VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN-F-DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSS---FVG 253 (672)
Q Consensus 180 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~-~l~~L~~l~l~~N~l~g~~p~~-~~~~~~l~---~~~ 253 (672)
++|+|++|+|++.+|..+. ++|+.|+|++|+|+ .+|. . .+++|+.|+|++|+++ .+|.. +..+++|. ..+
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCS
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecC
Confidence 9999999999988887765 78999999999999 4554 3 8899999999999999 56665 77766655 456
Q ss_pred CCCCCCC
Q 005875 254 NSLLCGP 260 (672)
Q Consensus 254 n~~~~~~ 260 (672)
|++.|.+
T Consensus 507 N~~~c~c 513 (562)
T 3a79_B 507 NPWDCTC 513 (562)
T ss_dssp CCBCCCH
T ss_pred CCcCCCc
Confidence 7776653
No 320
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.60 E-value=4.5e-16 Score=161.59 Aligned_cols=148 Identities=22% Similarity=0.214 Sum_probs=108.7
Q ss_pred CeEEEEEeCCCCccccCCc---cccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCC--CC-CCc-c--
Q 005875 106 TRVFGLRLPGIGLVGPIPN---NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IP-SSF-S-- 176 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~---~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--~p-~~~-~-- 176 (672)
..+..|+|++|.+.+..+. ..+..+++|++|+|++|.+++..|..|+++++|++|+|++|++.+. ++ ..+ .
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 4677888999988876652 2456788999999999999888888888999999999999988752 22 221 2
Q ss_pred cccceeecccccCcccCCc----hhhhhccccceecCCccccCCCCCC--C---CCCCceEEeecCCCCCCCCcccC-CC
Q 005875 177 PQLVVLDLSFNSFTGNIPQ----SIQNLTQLTGLSLQSNNLSGSIPNF--D---IPKLRHLNLSYNGLKGSIPSSLQ-KF 246 (672)
Q Consensus 177 ~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~--~---l~~L~~l~l~~N~l~g~~p~~~~-~~ 246 (672)
++|++|+|++|+|+ .+|. .++++++|+.|+|++|+|++..|.. . +++|++|+|++|+++ .+|..+. ++
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L 274 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKL 274 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCC
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCC
Confidence 68889999999887 3333 3577888999999999988876642 3 368889999999888 6676653 34
Q ss_pred CCCccccCC
Q 005875 247 PNSSFVGNS 255 (672)
Q Consensus 247 ~~l~~~~n~ 255 (672)
..|...+|.
T Consensus 275 ~~L~Ls~N~ 283 (310)
T 4glp_A 275 RVLDLSSNR 283 (310)
T ss_dssp SCEECCSCC
T ss_pred CEEECCCCc
Confidence 444444443
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=7e-16 Score=170.38 Aligned_cols=97 Identities=21% Similarity=0.216 Sum_probs=58.6
Q ss_pred CCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhh-hhccccceecCCccccCCCCCCCCCCCceEEee
Q 005875 155 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLS 231 (672)
Q Consensus 155 ~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~ 231 (672)
++|+.|+|++|.+++..|..+. ++|++|+|++|+|++.+|..+. ++++|+.|+|++|.|++..+...+++|+.|+|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls 199 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLS 199 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECC
Confidence 4445555555555555454443 5666666666666666666654 566666666666666665444466777777777
Q ss_pred cCCCCCCCCcccCCCCCCccc
Q 005875 232 YNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 232 ~N~l~g~~p~~~~~~~~l~~~ 252 (672)
+|.+++ +|..+..+++|..+
T Consensus 200 ~N~l~~-~~~~~~~l~~L~~L 219 (487)
T 3oja_A 200 SNKLAF-MGPEFQSAAGVTWI 219 (487)
T ss_dssp SSCCCE-ECGGGGGGTTCSEE
T ss_pred CCCCCC-CCHhHcCCCCccEE
Confidence 777775 34446555555544
No 322
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=2.2e-15 Score=158.44 Aligned_cols=130 Identities=12% Similarity=0.135 Sum_probs=94.7
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEecccccC---------------hhh--------HHHHHHHHHHHcCCCcee--
Q 005875 380 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------------KRD--------FEQQMEIVGRVGQHPNVV-- 434 (672)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------------~~~--------~~~e~~~l~~l~~h~niv-- 434 (672)
.+.||+|+||.||+|...+|+.||||+++..... ... ...|...+.++ .+.++.
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~gv~vp 178 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEGFPVP 178 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTTCSCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcCCCCC
Confidence 5689999999999999999999999987643110 001 12355556665 333322
Q ss_pred ceEEEEEeCCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecC
Q 005875 435 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ 514 (672)
Q Consensus 435 ~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~ 514 (672)
..++. ...++||||+++++|.++.. . .....++.|++.+|.|||+.| ||||||||.|||+++
T Consensus 179 ~p~~~----~~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 179 EPIAQ----SRHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIRE 240 (397)
T ss_dssp CEEEE----ETTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEE
T ss_pred eeeec----cCceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeC
Confidence 22222 23479999999999876643 1 123568899999999999998 999999999999998
Q ss_pred CCC----------eEEeecCCCCC
Q 005875 515 DLD----------GCISDFGLTPL 528 (672)
Q Consensus 515 ~~~----------~kl~DfGla~~ 528 (672)
++. +.|+||+-+..
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCcccccccccceEEEEeCCccc
Confidence 773 88999997644
No 323
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.59 E-value=1.6e-15 Score=172.92 Aligned_cols=155 Identities=22% Similarity=0.236 Sum_probs=135.1
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCC-CCCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFS-GKIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~--~~L~~L~ 183 (672)
.+..+++.+++.....+...+..+.+|+.++++.|.+++..|..+..+++|+.|+|++|++. +.+|..|. ++|++|+
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 45667777787777777778899999999999999999999999999999999999999854 45677776 7999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCC-CCC---ccccCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKF-PNS---SFVGNSLL 257 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~-~~l---~~~~n~~~ 257 (672)
|++|+|++..|..|.+|++|+.|+|++|+|++.+|.. .+++|+.|+|++|+|++..|..+..+ ++| ...+|++.
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 9999999999999999999999999999999887764 89999999999999999999988766 344 56689988
Q ss_pred CCCC
Q 005875 258 CGPP 261 (672)
Q Consensus 258 ~~~~ 261 (672)
|.+.
T Consensus 581 C~C~ 584 (635)
T 4g8a_A 581 CTCE 584 (635)
T ss_dssp CSGG
T ss_pred ccCC
Confidence 8754
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.59 E-value=2.2e-15 Score=157.74 Aligned_cols=144 Identities=25% Similarity=0.357 Sum_probs=124.8
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcC--CCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT--GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~--g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~l 184 (672)
.+..|++++|.+.+ +++..+.++++|++|+|++|.++ |..|..+.++++|++|++++|+++ .+|..+.++|++|+|
T Consensus 122 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l 199 (330)
T 1xku_A 122 TLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHL 199 (330)
T ss_dssp TCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEEC
T ss_pred cccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEEC
Confidence 46677777777774 44446889999999999999996 367888999999999999999998 578887799999999
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
++|++++..|..|.++++|+.|+|++|.+++..+.. .+++|+.|+|++|+++ .+|..+..+++|..+.
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 999999988999999999999999999999877754 8899999999999999 8898888888877654
No 325
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.59 E-value=1.5e-15 Score=175.06 Aligned_cols=149 Identities=26% Similarity=0.289 Sum_probs=127.4
Q ss_pred CcceeeecCC---------CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc
Q 005875 95 SWVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 165 (672)
Q Consensus 95 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 165 (672)
.+..|.|+.. ..+++.|+|++|++++ +|+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 5 ~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp BSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred ECCeeECCCCCccccccccCCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4566677642 2468899999999996 55547999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCc
Q 005875 166 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 241 (672)
Q Consensus 166 ~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~ 241 (672)
++++..+..|. ++|++|+|++|++++..|..|+++++|+.|+|++|.+++.+|.. .+++|++|+|++|.+++..|.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99965555566 89999999999999888889999999999999999999888764 899999999999999987776
Q ss_pred ccC
Q 005875 242 SLQ 244 (672)
Q Consensus 242 ~~~ 244 (672)
.+.
T Consensus 164 ~~~ 166 (680)
T 1ziw_A 164 ELD 166 (680)
T ss_dssp HHG
T ss_pred Hhh
Confidence 543
No 326
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=2.2e-15 Score=141.40 Aligned_cols=124 Identities=22% Similarity=0.286 Sum_probs=108.7
Q ss_pred CCCCCCcEEEccCCCcC-CCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhcccc
Q 005875 128 GKLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLT 204 (672)
Q Consensus 128 ~~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 204 (672)
...++|+.|+|++|.++ |.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|+|++.+|..+.++++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 89999999999999999999999976 5554 7999999999999988999999999999
Q ss_pred ceecCCccccCCC--CCC-CCCCCceEEeecCCCCCCCC---cccCCCCCCcccc
Q 005875 205 GLSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVG 253 (672)
Q Consensus 205 ~L~l~~N~l~~~~--p~~-~l~~L~~l~l~~N~l~g~~p---~~~~~~~~l~~~~ 253 (672)
.|+|++|+|++.. +.. .+++|+.|++++|.+++..+ ..+..+++|.+++
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 9999999999754 233 89999999999999996655 4788888887765
No 327
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.59 E-value=1.7e-15 Score=168.79 Aligned_cols=149 Identities=27% Similarity=0.376 Sum_probs=118.0
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCC--CCCCcCCCCCCCcEEeeeccCCCCCCCCC-cc--cccc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLV 180 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~--~~L~ 180 (672)
..++.|+|++|.+++.+|. .++.+++|++|+|++|++++ .+|..++++++|++|+|++|++++.+|.. +. ++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4677888999988887877 78889999999999999886 56777888899999999999998767765 33 7889
Q ss_pred eeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcc-cCCCCCCc---cccC
Q 005875 181 VLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSS---FVGN 254 (672)
Q Consensus 181 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~-~~~~~~l~---~~~n 254 (672)
+|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+++ .+|.. +.++++|. ..+|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC
Confidence 999999999888877665 78889999999988 55542 7888999999999988 56654 66666654 4466
Q ss_pred CCCCC
Q 005875 255 SLLCG 259 (672)
Q Consensus 255 ~~~~~ 259 (672)
+..|.
T Consensus 479 ~~~c~ 483 (520)
T 2z7x_B 479 PWDCS 483 (520)
T ss_dssp CBCCC
T ss_pred CCccc
Confidence 66554
No 328
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=8e-16 Score=141.38 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=108.1
Q ss_pred CCCCCcEEEccCCCcC-CCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccc
Q 005875 129 KLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTG 205 (672)
Q Consensus 129 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 205 (672)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|+|++.+|..+.++++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999998 89999999999999999999999976 4554 79999999999999889999999999999
Q ss_pred eecCCccccCCC--CCC-CCCCCceEEeecCCCCCCCC---cccCCCCCCcccc
Q 005875 206 LSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVG 253 (672)
Q Consensus 206 L~l~~N~l~~~~--p~~-~l~~L~~l~l~~N~l~g~~p---~~~~~~~~l~~~~ 253 (672)
|++++|++++.. +.. .+++|++|++++|++++..+ ..+..+++|..++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccccc
Confidence 999999999743 333 89999999999999997665 4788888887765
No 329
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=2.6e-15 Score=170.27 Aligned_cols=108 Identities=24% Similarity=0.264 Sum_probs=79.9
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
.+..|+|++|.+.+..|. .|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.+++..+..|. ++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTY-AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCChH-HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 566778888877755444 677888888888888888777777777888888888888887744444343 67888888
Q ss_pred ccccCcccCCchhhhhccccceecCCccccC
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 215 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 215 (672)
++|.|++..|..|+++++|+.|+|++|.|++
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 8888877777777777778888777777765
No 330
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.58 E-value=1.8e-15 Score=166.83 Aligned_cols=147 Identities=20% Similarity=0.155 Sum_probs=130.3
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++..|+|++|.+++..|. .|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 4688999999999976666 899999999999999999966666789999999999999999988888876 7999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCC--CCCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
|++|++++..|..|.++++|+.|+|++|++++..+. ..+++|+.|+|++|.+++..+..|.++++|..+.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 206 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEE
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceee
Confidence 999999999999999999999999999999976654 2889999999999999988888888888777654
No 331
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.58 E-value=4.7e-16 Score=161.64 Aligned_cols=146 Identities=27% Similarity=0.298 Sum_probs=119.1
Q ss_pred CeEEEEEeCCCCccccCCccccCCC-----CCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCC--CCCCc--c
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKL-----DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IPSSF--S 176 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--~p~~~--~ 176 (672)
..++.|+|++|.+++. |+ .++.+ ++|++|+|++|+|++..|..|+++++|++|+|++|++.|. +|..+ .
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 4688999999999977 65 68777 9999999999999988889999999999999999999875 23333 2
Q ss_pred --cccceeecccccCcc--cCC-chhhhhccccceecCCccccCCCCC--C-CCCCCceEEeecCCCCCCCCcccC-CCC
Q 005875 177 --PQLVVLDLSFNSFTG--NIP-QSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQ-KFP 247 (672)
Q Consensus 177 --~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~l~l~~N~l~g~~p~~~~-~~~ 247 (672)
++|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.+|. . .+++|+.|+|++|+++ .+|..+. ++.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCce
Confidence 799999999999993 233 3456889999999999999997753 2 6799999999999999 8888776 333
Q ss_pred CCccccC
Q 005875 248 NSSFVGN 254 (672)
Q Consensus 248 ~l~~~~n 254 (672)
.|...+|
T Consensus 278 ~L~Ls~N 284 (312)
T 1wwl_A 278 VLDLSYN 284 (312)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 3444444
No 332
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.58 E-value=2.8e-15 Score=157.09 Aligned_cols=143 Identities=23% Similarity=0.359 Sum_probs=111.2
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcC--CCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT--GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~--g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~l 184 (672)
.+..|++++|.+. .+|+..++.+++|++|+|++|.++ +..|..+..+ +|++|++++|++++ +|..+.++|++|+|
T Consensus 124 ~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l 200 (332)
T 2ft3_A 124 SLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHL 200 (332)
T ss_dssp TCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBC
T ss_pred cCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEEC
Confidence 4556666666666 344445677777777777777774 3556666666 77777777777773 67666788999999
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+++ .+|..+.++++|..++
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 999999888889999999999999999999877753 7899999999999999 8888888888777654
No 333
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=2.5e-15 Score=169.21 Aligned_cols=151 Identities=25% Similarity=0.294 Sum_probs=108.5
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCC-CcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.+..|++++|.+.+ +|+ .++.+++|++|+|++|.+++..| ..+.++++|++|+|++|.+++.+|..+. ++|++|+
T Consensus 374 ~L~~L~l~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 374 SLKYLDLSFNGVIT-MSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp CCCEEECCSCSEEE-EEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred ccCEEECCCCcccc-ccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 45566666666663 344 37777777777777777776655 4577788888888888888777776665 6788888
Q ss_pred cccccCc-ccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcc---ccCCCC
Q 005875 184 LSFNSFT-GNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLL 257 (672)
Q Consensus 184 ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~---~~n~~~ 257 (672)
|++|+++ +.+|..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..|..+.++++|.. .+|+..
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 8888887 567778888888888888888888776653 6778888888888888777766766666543 455554
Q ss_pred CC
Q 005875 258 CG 259 (672)
Q Consensus 258 ~~ 259 (672)
|.
T Consensus 532 ~~ 533 (570)
T 2z63_A 532 CS 533 (570)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 334
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.57 E-value=4.8e-15 Score=161.64 Aligned_cols=141 Identities=22% Similarity=0.203 Sum_probs=96.6
Q ss_pred CcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc
Q 005875 95 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 165 (672)
Q Consensus 95 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 165 (672)
.|..|.|.... ..+..|+|++|++.+..+. .|.++++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVN-SFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTT-TTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHH-HhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 46788887532 3467899999998865544 7899999999999999998777788889999999999999
Q ss_pred CCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC---CCCCCceEEeecCCCC
Q 005875 166 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 236 (672)
Q Consensus 166 ~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l~ 236 (672)
++++..+..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|+..+.++.. .+++|+.|+|++|+++
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 99865555565 68888888888887655555555555555555553333233321 3444444444444443
No 335
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.57 E-value=8.4e-15 Score=155.40 Aligned_cols=148 Identities=25% Similarity=0.244 Sum_probs=122.7
Q ss_pred ceeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCC-CCCCCcEEeeeccCCCCCCCCCc
Q 005875 97 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQHNNFSGKIPSSF 175 (672)
Q Consensus 97 ~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~ 175 (672)
....|.. ..+++++++|. .+|. .+. ..|+.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|
T Consensus 14 ~~C~C~~-----~~l~c~~~~l~-~iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 14 ANCLCAS-----NILSCSKQQLP-NVPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF 84 (361)
T ss_dssp TTCEEET-----TEEECCSSCCS-SCCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCEECC-----CEEEeCCCCcC-ccCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc
Confidence 5677764 25899999998 5887 343 4689999999999977777787 99999999999999997777777
Q ss_pred c--cccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCccc---CCCCC
Q 005875 176 S--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSL---QKFPN 248 (672)
Q Consensus 176 ~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~---~~~~~ 248 (672)
. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..| .++++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~ 164 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK 164 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTT
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc
Confidence 6 79999999999999888889999999999999999999877764 89999999999999996433444 45666
Q ss_pred Ccccc
Q 005875 249 SSFVG 253 (672)
Q Consensus 249 l~~~~ 253 (672)
|..++
T Consensus 165 L~~L~ 169 (361)
T 2xot_A 165 LMLLD 169 (361)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 66543
No 336
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.57 E-value=5.4e-15 Score=170.38 Aligned_cols=151 Identities=23% Similarity=0.268 Sum_probs=102.4
Q ss_pred EEEeCCCCcc--ccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCC--------Ccc--c
Q 005875 110 GLRLPGIGLV--GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS--------SFS--P 177 (672)
Q Consensus 110 ~l~l~~~~l~--g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--------~~~--~ 177 (672)
.|++.+|.+. +.+|. .++.+++|++|+|++|+|++..|..|.++++|++|+|++|++++..+. .|. +
T Consensus 458 ~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~ 536 (680)
T 1ziw_A 458 RLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLS 536 (680)
T ss_dssp EEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCT
T ss_pred cchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCC
Confidence 3444444333 34454 577777777777777777766666677777777777777777743211 122 6
Q ss_pred ccceeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcc----cCCCCCCcc
Q 005875 178 QLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS----LQKFPNSSF 251 (672)
Q Consensus 178 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~----~~~~~~l~~ 251 (672)
+|++|+|++|+|+...+..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..|.. +.++..+.+
T Consensus 537 ~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l 616 (680)
T 1ziw_A 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDM 616 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEEC
T ss_pred CCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEc
Confidence 7888888888888444446788888888888888888655553 6788888888888888766653 345556667
Q ss_pred ccCCCCCCCC
Q 005875 252 VGNSLLCGPP 261 (672)
Q Consensus 252 ~~n~~~~~~~ 261 (672)
.+|++.|.++
T Consensus 617 ~~N~~~c~c~ 626 (680)
T 1ziw_A 617 RFNPFDCTCE 626 (680)
T ss_dssp TTCCCCBCCC
T ss_pred cCCCcccCCc
Confidence 7888887654
No 337
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.57 E-value=6.4e-15 Score=149.08 Aligned_cols=137 Identities=20% Similarity=0.242 Sum_probs=114.8
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeecc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 185 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 185 (672)
..+..|++++|+++ .+| .++.+++|++|+|++|+|++..| +.++++|++|+|++|++++ +|....++|++|+|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccccCcccEEEcc
Confidence 35778999999988 566 58999999999999999996555 9999999999999999996 444333899999999
Q ss_pred cccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 186 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 186 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
+|+|++ +| .+.++++|+.|+|++|+|++..+-..+++|+.|+|++|++++. ..+.++++|..+
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L 177 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWI 177 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEE
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEE
Confidence 999996 33 6999999999999999999764333899999999999999976 667777776654
No 338
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.56 E-value=4e-15 Score=166.91 Aligned_cols=148 Identities=22% Similarity=0.268 Sum_probs=112.9
Q ss_pred CeEEEEEeCCCCccccCC-ccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeec
Q 005875 106 TRVFGLRLPGIGLVGPIP-NNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 184 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p-~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~l 184 (672)
..++.|+|++|.+++..+ ...++.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|..+.++|++|+|
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~L 438 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDV 438 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEEC
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEEC
Confidence 346667777777664221 124777888888888888887 67777888888888888888887 566666678888888
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCc---cccCCCCCCC
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLCGP 260 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~n~~~~~~ 260 (672)
++|+|++.+ .++++|+.|+|++|+|+ .+|.. .+++|+.|+|++|++++.+|..+.++++|. ..+|++.|.+
T Consensus 439 s~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 439 SNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp CSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred CCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 888888643 47889999999999999 56654 789999999999999998888777766654 5577776653
No 339
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=6.7e-15 Score=141.62 Aligned_cols=120 Identities=21% Similarity=0.268 Sum_probs=108.0
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeec
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 164 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 164 (672)
|.|..+.|+... ..++.|+|++|.++ .+|. .|..+++|++|+|++|.|++..|..|.++++|++|+|++
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 478889997532 36889999999998 7886 899999999999999999988888999999999999999
Q ss_pred cCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCccccC
Q 005875 165 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 215 (672)
Q Consensus 165 N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 215 (672)
|+|++..|..|. ++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999988777776 899999999999997777789999999999999999985
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.56 E-value=1.5e-15 Score=157.64 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=122.0
Q ss_pred eEEEEEeCCCCccccCCcccc--CCCCCCcEEEccCCCcCCCCC----CcCCCCCCCcEEeeeccCCCCCCCCCcc--cc
Q 005875 107 RVFGLRLPGIGLVGPIPNNTL--GKLDALEVLSLRSNVLTGGLP----SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQ 178 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~--~~l~~L~~L~L~~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~ 178 (672)
++..|+|++|++.+.+|. .+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|. ++
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 488999999999999998 56 999999999999999998766 4456899999999999999988888876 89
Q ss_pred cceeecccccCccc--C--CchhhhhccccceecCCccccCCCCC-----CCCCCCceEEeecCCCCCCCCcccCCC---
Q 005875 179 LVVLDLSFNSFTGN--I--PQSIQNLTQLTGLSLQSNNLSGSIPN-----FDIPKLRHLNLSYNGLKGSIPSSLQKF--- 246 (672)
Q Consensus 179 L~~L~ls~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~-----~~l~~L~~l~l~~N~l~g~~p~~~~~~--- 246 (672)
|++|+|++|++++. + +..++++++|++|+|++|+|+...+. ..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998863 3 23357899999999999999743321 167999999999999999889887766
Q ss_pred CCCcccc
Q 005875 247 PNSSFVG 253 (672)
Q Consensus 247 ~~l~~~~ 253 (672)
++|..++
T Consensus 251 ~~L~~L~ 257 (310)
T 4glp_A 251 SALNSLN 257 (310)
T ss_dssp TTCCCEE
T ss_pred CcCCEEE
Confidence 4555543
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.56 E-value=3e-15 Score=149.12 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=122.5
Q ss_pred CeEEEEEeCCCC-ccccCCccccCCCCCCcEEEccC-CCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccc-
Q 005875 106 TRVFGLRLPGIG-LVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLV- 180 (672)
Q Consensus 106 ~~v~~l~l~~~~-l~g~~p~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~- 180 (672)
.++..|+|++|. ++ .+++..|+++++|++|+|++ |+|++..|..|.++++|++|+|++|++++ +|. +. ++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 468899999997 66 67766899999999999999 99997667789999999999999999996 776 54 6777
Q ss_pred --eeecccc-cCcccCCchhhhhcccc-ceecCCccccCCCCCC--CCCCCceEEeecCC-CCCCCCcccCCC-CCCccc
Q 005875 181 --VLDLSFN-SFTGNIPQSIQNLTQLT-GLSLQSNNLSGSIPNF--DIPKLRHLNLSYNG-LKGSIPSSLQKF-PNSSFV 252 (672)
Q Consensus 181 --~L~ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~-l~g~~p~~~~~~-~~l~~~ 252 (672)
+|+|++| ++++..+..|.++++|+ .|++++|+++ .+|.. ..++|+.|+|++|+ +++..+..|..+ ++|..+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99987778899999999 9999999999 55543 45889999999995 986666778887 777765
Q ss_pred c
Q 005875 253 G 253 (672)
Q Consensus 253 ~ 253 (672)
+
T Consensus 211 ~ 211 (239)
T 2xwt_C 211 D 211 (239)
T ss_dssp E
T ss_pred E
Confidence 4
No 342
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.55 E-value=4.7e-15 Score=143.16 Aligned_cols=128 Identities=23% Similarity=0.327 Sum_probs=108.8
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++..|++++|.+. .++ .+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..+. ++|++|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 36889999999665 333 699999999999999999988899999999999999999999987787776 7999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g 237 (672)
|++|++.+.+| .+.++++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999333666 799999999999999999975533489999999999999874
No 343
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.54 E-value=1.3e-14 Score=155.62 Aligned_cols=107 Identities=25% Similarity=0.320 Sum_probs=70.6
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCC-cc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~--~~L~~L~ 183 (672)
++..|+|++|.+.+..+ ..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. |. ++|++|+
T Consensus 70 ~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred cCcEEECCCCcccccCh-hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 45667777777664333 36777777777777777777666666777777777777777776 34433 33 5677777
Q ss_pred cccccCcccCCchhhhhccccceecCCccccC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 215 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 215 (672)
|++|+|++..|..|+++++|+.|++++|++++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 77777776666667777777777777776664
No 344
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.53 E-value=1.2e-14 Score=163.70 Aligned_cols=136 Identities=22% Similarity=0.248 Sum_probs=125.7
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCC-CCCCCCcc--ccccee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFS-GKIPSSFS--PQLVVL 182 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~--~~L~~L 182 (672)
..+..|++++|.+.+..|...+..+++|++|+|++|.+++..|..+.++++|+.|+|++|+++ +.+|..+. ++|++|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 357789999999998877667999999999999999999999999999999999999999998 68898876 899999
Q ss_pred ecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCc
Q 005875 183 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 241 (672)
Q Consensus 183 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~ 241 (672)
+|++|++++..|..|.++++|+.|+|++|++++.+|.. .+++|+.|++++|++++..|.
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999999999999999999999988764 899999999999999988774
No 345
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.53 E-value=1.6e-15 Score=157.98 Aligned_cols=136 Identities=19% Similarity=0.142 Sum_probs=72.5
Q ss_pred EEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc---cccceeec
Q 005875 108 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLDL 184 (672)
Q Consensus 108 v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L~~L~l 184 (672)
+..|++++|.+++..+ ..+++|++|+|++|++++..|..++.+++|++|+|++|.+++..|..+. ++|++|+|
T Consensus 101 L~~L~l~~n~l~~~~~----~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 101 IETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp CCEEECCSSCCSEEEE----CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred cCEEECCCCccCCcCc----cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 4445555555543222 1245566666666666655555556666666666666666655444443 45666666
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 250 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 250 (672)
++|+|++. |. ...+++|+.|+|++|+|++.++.+ .+++|+.|+|++|+++ .+|..+..+++|.
T Consensus 177 ~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~ 240 (317)
T 3o53_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLE 240 (317)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCC
T ss_pred CCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCC
Confidence 66666543 21 223555666666666665544433 5555666666666665 3455554444443
No 346
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.52 E-value=3.4e-15 Score=155.48 Aligned_cols=143 Identities=22% Similarity=0.208 Sum_probs=91.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCC-c---------------CCCCCCCcEEeeeccCCCC
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-E---------------ITSLPSLRYLYLQHNNFSG 169 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~-~---------------~~~l~~L~~L~l~~N~l~g 169 (672)
.++..|+|++|.+++..| ++.+++|++|+|++|.|++..+. . ...+++|+.|+|++|++++
T Consensus 58 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp TTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 467788888888876442 78888888888888877642210 0 1123455666666666665
Q ss_pred CCCCCcc--cccceeecccccCcccCCchhh-hhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCC
Q 005875 170 KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKF 246 (672)
Q Consensus 170 ~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 246 (672)
..|..+. ++|++|+|++|+|++..|..+. ++++|+.|+|++|+|++..+...+++|+.|+|++|++++ +|..+..+
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 213 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSA 213 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhccc
Confidence 5454553 5677777777777766666553 567777777777777755444467777777777777774 44456666
Q ss_pred CCCccc
Q 005875 247 PNSSFV 252 (672)
Q Consensus 247 ~~l~~~ 252 (672)
++|..+
T Consensus 214 ~~L~~L 219 (317)
T 3o53_A 214 AGVTWI 219 (317)
T ss_dssp TTCSEE
T ss_pred CcccEE
Confidence 665554
No 347
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.52 E-value=2e-14 Score=161.81 Aligned_cols=139 Identities=27% Similarity=0.245 Sum_probs=116.8
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeecc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 185 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 185 (672)
.+++.|+|++|.+++..| +.|+++++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|..-.++|++|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISELRM-PDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCCCG-GGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSCCCTTCSEEECC
T ss_pred CCcCEEECCCCCccccCh-hhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCccccccCCEEECC
Confidence 468899999999985444 48999999999999999999888889999999999999999998 6777644899999999
Q ss_pred cccCcc-cCCchhhhhccccceecCCccccCCCCCCCCCCC--ceEEeecCCC--CCCCCcccCCCC
Q 005875 186 FNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKL--RHLNLSYNGL--KGSIPSSLQKFP 247 (672)
Q Consensus 186 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L--~~l~l~~N~l--~g~~p~~~~~~~ 247 (672)
+|+|++ .+|..|+++++|+.|+|++|++++. ....+++| +.|+|++|.+ ++..|..+..+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 999997 4578999999999999999999862 22255555 9999999999 888888887765
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.52 E-value=2.3e-14 Score=151.30 Aligned_cols=95 Identities=21% Similarity=0.241 Sum_probs=61.3
Q ss_pred CCcceeeecCCC---------CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCC-cCCCCCCCcE-Eee
Q 005875 94 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRY-LYL 162 (672)
Q Consensus 94 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~-L~l 162 (672)
|+|..|.|++.. ..++.|+|++|+|+ .||++.|++|++|++|+|++|++.+.+|. .|.++++|+. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 589999997532 35789999999998 78877899999999999999998665553 3445444332 333
Q ss_pred eccCCCCCCCCCcc--cccceeecccccC
Q 005875 163 QHNNFSGKIPSSFS--PQLVVLDLSFNSF 189 (672)
Q Consensus 163 ~~N~l~g~~p~~~~--~~L~~L~ls~N~l 189 (672)
+.|++++..|..|. ++|++|++++|+|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECC
T ss_pred cCCcccccCchhhhhcccccccccccccc
Confidence 44444433333332 3344444444433
No 349
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.51 E-value=8.7e-15 Score=163.10 Aligned_cols=139 Identities=27% Similarity=0.282 Sum_probs=121.7
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeecc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 185 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 185 (672)
.+++.|+|++|++++..|. .|+.+++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..-.++|++|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTS-DILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCHPTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCCCCHH-HHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECCCCCCCSEEECC
T ss_pred ccccEEECCCCcccccChh-hccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCccccCCccEEecc
Confidence 4788999999999965554 7999999999999999999888999999999999999999999 6777644899999999
Q ss_pred cccCcc-cCCchhhhhccccceecCCccccCCCCCCCCCCC--ceEEeecCCC--CCCCCcccCCCC
Q 005875 186 FNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKL--RHLNLSYNGL--KGSIPSSLQKFP 247 (672)
Q Consensus 186 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L--~~l~l~~N~l--~g~~p~~~~~~~ 247 (672)
+|+|++ .+|..|+++++|+.|+|++|++++. .-..+++| +.|++++|.+ ++..|..+..+.
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred CCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeecccccccccccccccccc
Confidence 999997 5889999999999999999999862 22366777 9999999999 888888888765
No 350
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=8e-17 Score=155.78 Aligned_cols=142 Identities=25% Similarity=0.333 Sum_probs=119.2
Q ss_pred eEEEEEeCCCCccccCCc-----cccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--ccc
Q 005875 107 RVFGLRLPGIGLVGPIPN-----NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQL 179 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~-----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L 179 (672)
+++.+++.++.+.|.+|. ..++.+++|++|+|++|.|++ +| .+.++++|++|+|++|+++ .+|..+. ++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 445556666666666653 258999999999999999996 78 8999999999999999999 6787665 799
Q ss_pred ceeecccccCcccCCchhhhhccccceecCCccccCCCC--C-CCCCCCceEEeecCCCCCCCCcc----------cCCC
Q 005875 180 VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP--N-FDIPKLRHLNLSYNGLKGSIPSS----------LQKF 246 (672)
Q Consensus 180 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~-~~l~~L~~l~l~~N~l~g~~p~~----------~~~~ 246 (672)
++|+|++|+|++ +| .+.++++|+.|+|++|++++..+ . ..+++|++|++++|++++.+|.. +.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 55 79999999999999999996443 2 38999999999999999877653 7788
Q ss_pred CCCcccc
Q 005875 247 PNSSFVG 253 (672)
Q Consensus 247 ~~l~~~~ 253 (672)
++|..++
T Consensus 174 ~~L~~Ld 180 (198)
T 1ds9_A 174 PNLKKLD 180 (198)
T ss_dssp SSCSEEC
T ss_pred CCcEEEC
Confidence 8888776
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.51 E-value=3.4e-14 Score=145.94 Aligned_cols=136 Identities=32% Similarity=0.400 Sum_probs=104.4
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.+++.|+|++|++++ +++ ++.+++|++|+|++|.+++ +| .+.++++|++|+|++|++++. + .+. ++|++|+
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~-~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-G-GGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-h-hhcCCCCCCEEE
Confidence 457788888888875 443 8888888888888888885 44 488888888888888888853 3 333 7888888
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
|++|+|++. ..+.++++|+.|+|++|++++..|-..+++|+.|+|++|.+++ +| .+.++++|..+
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L 205 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVL 205 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 888888864 5788888888888888888877664578888888888888885 44 36666666554
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.51 E-value=1.3e-15 Score=176.08 Aligned_cols=137 Identities=27% Similarity=0.308 Sum_probs=119.1
Q ss_pred CCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--ccccee
Q 005875 105 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 182 (672)
Q Consensus 105 ~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 182 (672)
...+..|+|++|.+. .+|+ .+..|++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|. ++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 356889999999998 8988 5779999999999999999 99999999999999999999999 8899987 799999
Q ss_pred ecccccCcccCCchhhhhccccceecCCccccCCCCCC--CC-CCCceEEeecCCCCCCCCcccCCC
Q 005875 183 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DI-PKLRHLNLSYNGLKGSIPSSLQKF 246 (672)
Q Consensus 183 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l-~~L~~l~l~~N~l~g~~p~~~~~~ 246 (672)
+|++|.|+ .+|..|++|++|+.|+|++|.|+|.+|.. .+ ..+..|+|++|.++|.+|..+..+
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 99999998 88999999999999999999999988864 11 122357899999999999877654
No 353
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.51 E-value=2.2e-14 Score=160.87 Aligned_cols=117 Identities=25% Similarity=0.263 Sum_probs=98.9
Q ss_pred EEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecc
Q 005875 108 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLS 185 (672)
Q Consensus 108 v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls 185 (672)
+..|+|++|++++ +|. ++.|++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|++ +| .+. ++|++|+|+
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 5668899998885 664 889999999999999998 888889999999999999999986 67 555 789999999
Q ss_pred cccCcccC-CchhhhhccccceecCCccccCCCCCC-----CCCCCceEEe
Q 005875 186 FNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNL 230 (672)
Q Consensus 186 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~-----~l~~L~~l~l 230 (672)
+|+|++.. |..|++|++|+.|+|++|+|++.+|.. .+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999776 888999999999999999998877754 4788888864
No 354
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.50 E-value=3.7e-14 Score=149.90 Aligned_cols=149 Identities=23% Similarity=0.250 Sum_probs=124.0
Q ss_pred ceeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc
Q 005875 97 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS 176 (672)
Q Consensus 97 ~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 176 (672)
..+.|... .+ .++++++++ .+|. .+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.
T Consensus 26 ~~~~C~~~--~~--c~~~~~~l~-~iP~-~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 26 ASLSCDRN--GI--CKGSSGSLN-SIPS-GLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp -CCEECTT--SE--EECCSTTCS-SCCT-TCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cCCCCCCC--eE--eeCCCCCcc-cccc-ccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcC
Confidence 45677653 23 789999998 7887 343 5899999999999976666899999999999999999988788787
Q ss_pred --cccceeecccccCcccCCchhhhhccccceecCCccccCCCC-C-C-CCCCCceEEeecCC-CCCCCCcccCCCCCCc
Q 005875 177 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP-N-F-DIPKLRHLNLSYNG-LKGSIPSSLQKFPNSS 250 (672)
Q Consensus 177 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~-~-~l~~L~~l~l~~N~-l~g~~p~~~~~~~~l~ 250 (672)
++|++|+|++|+|++..+..|+++++|++|+|++|++++..+ . + .+++|++|++++|+ +++..|..+.++++|.
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 899999999999996555569999999999999999996555 2 3 89999999999995 6666677888888877
Q ss_pred ccc
Q 005875 251 FVG 253 (672)
Q Consensus 251 ~~~ 253 (672)
.++
T Consensus 178 ~L~ 180 (353)
T 2z80_A 178 ELE 180 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.49 E-value=5.1e-14 Score=144.65 Aligned_cols=136 Identities=22% Similarity=0.321 Sum_probs=116.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.+++.|+++++++. .++ .++.+++|++|+|++|++++..| +.++++|++|+|++|++++ +|. +. ++|++|+
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEE
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEE
Confidence 35788999999988 455 48999999999999999997555 9999999999999999996 443 44 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
|++|+|++. +.+.++++|+.|+|++|++++. +.. .+++|+.|+|++|++++..| +..+++|..++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 999999964 5799999999999999999976 443 89999999999999997655 77888777654
No 356
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.49 E-value=5e-14 Score=145.98 Aligned_cols=136 Identities=27% Similarity=0.380 Sum_probs=94.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++..|+|++|.+.+ +++ +..+++|++|+|++|.+++ +| .+.++++|++|+|++|++++. |. +. ++|++|+
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEE
Confidence 356778888887774 443 7778888888888888774 33 577788888888888887753 32 33 6788888
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
|++|++++..+ ++++++|+.|+|++|++++..+-..+++|+.|+|++|++++..+ +..+++|..+
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 200 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEV 200 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEE
Confidence 88888775443 77777788888888877765553477777888888887775433 5555555443
No 357
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.48 E-value=7e-14 Score=144.88 Aligned_cols=136 Identities=25% Similarity=0.388 Sum_probs=75.1
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeeccc
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 186 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls~ 186 (672)
++..|+|++|.+.+ ++ .++.+++|++|+|++|++++ +|. +.++++|++|+|++|++++..+-.-.++|++|+|++
T Consensus 86 ~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~ 160 (308)
T 1h6u_A 86 KITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGN 160 (308)
T ss_dssp SCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCS
T ss_pred CCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCccccCCCCccEEEccC
Confidence 45566666666553 32 36666666666666666664 232 566666666666666666433311115566666666
Q ss_pred ccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCcc
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 251 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 251 (672)
|++++..+ +.++++|+.|+|++|++++..+-..+++|++|+|++|++++..| +.++++|..
T Consensus 161 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~ 221 (308)
T 1h6u_A 161 AQVSDLTP--LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFI 221 (308)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCE
T ss_pred CcCCCChh--hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCE
Confidence 66664322 56666666666666666654443355666666666666664332 444444443
No 358
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.1e-13 Score=130.13 Aligned_cols=104 Identities=25% Similarity=0.273 Sum_probs=76.0
Q ss_pred EEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccc
Q 005875 110 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFN 187 (672)
Q Consensus 110 ~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N 187 (672)
.+++++|+++ .+|. .+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|. ++|++|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 5677777777 5776 34 37888999999999988888888888888888888888865554443 56777777777
Q ss_pred cCcccCCchhhhhccccceecCCccccCCC
Q 005875 188 SFTGNIPQSIQNLTQLTGLSLQSNNLSGSI 217 (672)
Q Consensus 188 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (672)
+|++..|..|.++++|+.|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 777655556667777776666666666443
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.48 E-value=1e-13 Score=154.74 Aligned_cols=117 Identities=28% Similarity=0.427 Sum_probs=72.0
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeeccc
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 186 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls~ 186 (672)
+++.|+|++|+++ .+| +.+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. ..++|++|+|++
T Consensus 81 ~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADN 149 (571)
T ss_dssp TCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCS
T ss_pred CCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCC
Confidence 4666777777766 565 345667777777777765 665 544 66666666666665 555 446666666666
Q ss_pred ccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCc
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPS 241 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~ 241 (672)
|+|++ +|. .+++|+.|+|++|+|++ +|.+. ++|+.|+|++|+|+ .+|.
T Consensus 150 N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 150 NQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 66664 444 45566666666666665 33333 56666666666666 4454
No 360
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.48 E-value=7.2e-14 Score=132.27 Aligned_cols=112 Identities=27% Similarity=0.313 Sum_probs=99.3
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
..++.|++++|++++ +|+..++.+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..+. ++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 468899999999985 5555789999999999999999977777789999999999999999977666665 7999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP 218 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 218 (672)
|++|+|++..+..+.++++|+.|+|++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997766678999999999999999998766
No 361
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.3e-13 Score=129.75 Aligned_cols=104 Identities=29% Similarity=0.334 Sum_probs=93.6
Q ss_pred CcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCC
Q 005875 133 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS 210 (672)
Q Consensus 133 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 210 (672)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 6887774 8999999999999988888886 8999999999999987777889999999999999
Q ss_pred ccccCCCCCC--CCCCCceEEeecCCCCCCC
Q 005875 211 NNLSGSIPNF--DIPKLRHLNLSYNGLKGSI 239 (672)
Q Consensus 211 N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~ 239 (672)
|+|++..+.. .+++|+.|+|++|+++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999877763 8999999999999998543
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.47 E-value=9.3e-14 Score=156.74 Aligned_cols=137 Identities=32% Similarity=0.383 Sum_probs=116.0
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
..+..|+|++|.+.+ +++ ++.|++|+.|+|++|.|++ +| .+..|++|+.|+|++|++++. | .+. ++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-G-GGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-c-cccCCCccCEEE
Confidence 468899999999986 443 8999999999999999985 44 799999999999999999963 3 343 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
|++|+|++. ..|..|++|+.|+|++|+|++.+|...+++|+.|+|++|+|++. +.+..+++|..+.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~ 203 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLE 203 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC--hHHccCCCCCEEE
Confidence 999999965 67999999999999999999888855899999999999999963 3577777776553
No 363
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=5.2e-14 Score=133.18 Aligned_cols=124 Identities=23% Similarity=0.286 Sum_probs=84.8
Q ss_pred eEEEEEeCCCCccccCCccccCCCC-CCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLD-ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++.|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..|+++++|++|+|++|++++..|..+. ++|++|+
T Consensus 20 ~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 20 RDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp SCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 4677788887777 4543 44444 788888888887754 5677778888888888887743323223 6778888
Q ss_pred cccccCcccCCc--hhhhhccccceecCCccccCCCCC----C-CCCCCceEEeecCCCC
Q 005875 184 LSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPN----F-DIPKLRHLNLSYNGLK 236 (672)
Q Consensus 184 ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~----~-~l~~L~~l~l~~N~l~ 236 (672)
|++|+|+ .+|. .+.++++|+.|++++|.++...+. . .+++|+.||+++|...
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888775 4555 677777788888888877743332 2 6777777777777654
No 364
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2.1e-13 Score=128.78 Aligned_cols=104 Identities=25% Similarity=0.284 Sum_probs=76.6
Q ss_pred EEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeeccc
Q 005875 109 FGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 186 (672)
Q Consensus 109 ~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~ 186 (672)
+.++++++++. .+|. .+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|. ++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 46788888885 7887 343 8889999999999988888888999998888888888864444443 6777777777
Q ss_pred ccCcccCCchhhhhccccceecCCccccCC
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGS 216 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (672)
|+|++..+..|.++++|+.|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 777755444566676676666666666643
No 365
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.3e-13 Score=128.50 Aligned_cols=101 Identities=26% Similarity=0.348 Sum_probs=91.7
Q ss_pred cEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecCCc
Q 005875 134 EVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSN 211 (672)
Q Consensus 134 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 211 (672)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 78999999997 8898775 8999999999999988888886 89999999999999776677899999999999999
Q ss_pred cccCCCCC-C-CCCCCceEEeecCCCCC
Q 005875 212 NLSGSIPN-F-DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 212 ~l~~~~p~-~-~l~~L~~l~l~~N~l~g 237 (672)
+|++.++. + .+++|++|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99987776 3 79999999999999984
No 366
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.45 E-value=1.4e-14 Score=158.43 Aligned_cols=134 Identities=22% Similarity=0.232 Sum_probs=67.8
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCC-------------cEEeeeccCCCCCCC
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSL-------------RYLYLQHNNFSGKIP 172 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L-------------~~L~l~~N~l~g~~p 172 (672)
.++..+++++|++ |.+|+ .+++|++|++|+|++|.++|.+|.+++++++| ++|++++|.+++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 4677888888888 78888 68999999999999998888888888887764 777777777774 34
Q ss_pred CCcccccceeecccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCcc
Q 005875 173 SSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 251 (672)
Q Consensus 173 ~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 251 (672)
. +.++|++|+|++|++++ +|..+ ++|+.|++++|++++. |.. .++|++|++++|++++ +| .++++++|..
T Consensus 88 ~-~~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~l-~~~-~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~ 157 (454)
T 1jl5_A 88 E-LPPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKAL-SDL-PPLLEYLGVSNNQLEK-LP-ELQNSSFLKI 157 (454)
T ss_dssp S-CCTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSCC-CSC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCE
T ss_pred C-CcCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCcc-cCC-CCCCCEEECcCCCCCC-Cc-ccCCCCCCCE
Confidence 3 34567777777777765 55432 4455555555555531 111 1345555555555553 44 3444444443
No 367
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.43 E-value=2.1e-13 Score=149.81 Aligned_cols=138 Identities=33% Similarity=0.356 Sum_probs=99.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeecc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 185 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 185 (672)
..+..|++++|.+.+ ++ .+..+++|++|+|++|.+++..| +.++++|+.|+|++|.+++..|-.-.++|++|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcC
Confidence 357778888888774 33 57788888888888888886655 77888888888888888865442222678888888
Q ss_pred cccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 186 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 186 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
+|++++..| ++.+++|+.|+|++|++++..|...+++|+.|++++|++++. ..+.++++|..+
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 888876544 777788888888888887776655777778888888777764 356666666554
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.43 E-value=1.1e-13 Score=155.10 Aligned_cols=104 Identities=31% Similarity=0.330 Sum_probs=79.4
Q ss_pred CCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecC
Q 005875 132 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 209 (672)
Q Consensus 132 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 209 (672)
.|+.|+|++|.|++ +|. |++|++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +| .|++|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46678888888874 665 788888888888888888 7777776 678888888888885 56 78888888888888
Q ss_pred CccccCCC-CCC--CCCCCceEEeecCCCCCCCC
Q 005875 210 SNNLSGSI-PNF--DIPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 210 ~N~l~~~~-p~~--~l~~L~~l~l~~N~l~g~~p 240 (672)
+|+|++.+ |.. .+++|+.|+|++|+|++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 88888775 543 77888888888888876554
No 369
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.42 E-value=1.2e-13 Score=130.67 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=102.7
Q ss_pred ccCCCCCCcEEEccCCCcCCCCCCcCCCCC-CCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhcc
Q 005875 126 TLGKLDALEVLSLRSNVLTGGLPSEITSLP-SLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 202 (672)
Q Consensus 126 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~ 202 (672)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..+. ++|++|+|++|+|++..|..+.++++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4778999999999999999 5564 55555 999999999999965 4554 79999999999999765566799999
Q ss_pred ccceecCCccccCCCCC---C-CCCCCceEEeecCCCCCCCCcc----cCCCCCCcccc
Q 005875 203 LTGLSLQSNNLSGSIPN---F-DIPKLRHLNLSYNGLKGSIPSS----LQKFPNSSFVG 253 (672)
Q Consensus 203 L~~L~l~~N~l~~~~p~---~-~l~~L~~l~l~~N~l~g~~p~~----~~~~~~l~~~~ 253 (672)
|+.|+|++|+|+. +|. . .+++|+.|++++|.++ .+|.. +..+++|.+++
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld 146 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 146 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeC
Confidence 9999999999975 443 3 8899999999999998 56764 78888887776
No 370
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.42 E-value=1.9e-13 Score=154.24 Aligned_cols=136 Identities=24% Similarity=0.344 Sum_probs=116.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
.++..|+|+++++. .+| .++.|++|+.|+|++|.|++..| +.+|++|+.|+|++|.|++ +| .+. ++|+.|+
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 35677899999987 455 49999999999999999997665 9999999999999999996 44 444 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
|++|+|++ + +.+.+|++|+.|+|++|+|++. +.. .+++|+.|+|++|++++..| +..+++|..++
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 99999996 3 4699999999999999999976 443 89999999999999998766 77777776653
No 371
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.41 E-value=8.1e-13 Score=144.40 Aligned_cols=132 Identities=25% Similarity=0.381 Sum_probs=103.4
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeeccc
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 186 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls~ 186 (672)
.++.|++++|.+++ +|. + .++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|+|++
T Consensus 112 ~L~~L~l~~n~l~~-l~~--~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-~~L~~L~L~~ 182 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD--L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-PSLEFIAAGN 182 (454)
T ss_dssp TCCEEECCSSCCSC-CCS--C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCS
T ss_pred CCcEEECCCCccCc-ccC--C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-ccccEEECcC
Confidence 45666666666663 332 1 1689999999999985 78 59999999999999999995 66554 5899999999
Q ss_pred ccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
|++++ +| .++++++|+.|++++|++++ +|.. .++|+.|++++|.++ .+|. ++++++|..+.
T Consensus 183 n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~ 243 (454)
T 1jl5_A 183 NQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE-LQNLPFLTTIY 243 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc-cCCCCCCCEEE
Confidence 99996 66 68999999999999999987 4433 368999999999998 6774 77777776654
No 372
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.41 E-value=3.8e-13 Score=147.12 Aligned_cols=123 Identities=23% Similarity=0.159 Sum_probs=79.4
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeeccc
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 186 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls~ 186 (672)
.+..|++++|...+.+ .++.+++|++|+|++|+|++ +| ++.+++|+.|++++|++++. +-.-.++|++|+|++
T Consensus 149 ~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~ 221 (457)
T 3bz5_A 149 QLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSS 221 (457)
T ss_dssp TCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCS
T ss_pred cCCEEECCCCCccccc---ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcC
Confidence 5667777777666666 26677777777777777775 45 67777777777777777754 311126777777777
Q ss_pred ccCcccCCchhhhhccccceecCCccccCCCCCCCCC----------CCceEEeecCCCCCCCC
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP----------KLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~----------~L~~l~l~~N~l~g~~p 240 (672)
|+|++ +| ++.+++|+.|++++|+|++..+. .++ +|+.|++++|.+.|.+|
T Consensus 222 N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 222 NKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred Ccccc-cC--ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 77775 55 67777777777777777764432 222 34444555555555554
No 373
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.40 E-value=2.2e-13 Score=153.96 Aligned_cols=152 Identities=26% Similarity=0.351 Sum_probs=105.8
Q ss_pred CCCCCCCCCCCcceeeec------CCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCc
Q 005875 85 NWSSTNPICQSWVGINCT------QDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLR 158 (672)
Q Consensus 85 ~w~~~~~~c~~w~gv~C~------~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 158 (672)
.|....++| .|.|..|. .....++.|++++++++ .+|. .+. ++|++|+|++|+|+ .+|. .+++|+
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCTTCC
T ss_pred HHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCCCCC
Confidence 576555555 78664221 11134778999999988 7887 444 78999999999988 6675 578888
Q ss_pred EEeeeccCCCCCCCCCcccccceeecccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCC
Q 005875 159 YLYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGS 238 (672)
Q Consensus 159 ~L~l~~N~l~g~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~ 238 (672)
+|+|++|+|+ .+|. ..++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|++++
T Consensus 85 ~L~Ls~N~l~-~lp~-~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV-LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQLAS- 155 (622)
T ss_dssp EEEECSCCCS-CCCC-CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEEcCCCcCC-cCCC-CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcCCC-
Confidence 9999999888 5666 44788888888888884 454 56777888888888875 333 34777777887777774
Q ss_pred CCcccCCCCCCccccC
Q 005875 239 IPSSLQKFPNSSFVGN 254 (672)
Q Consensus 239 ~p~~~~~~~~l~~~~n 254 (672)
+|..+.++..|...+|
T Consensus 156 l~~~~~~L~~L~L~~N 171 (622)
T 3g06_A 156 LPALPSELCKLWAYNN 171 (622)
T ss_dssp CCCCCTTCCEEECCSS
T ss_pred cCCccCCCCEEECCCC
Confidence 4555555544444333
No 374
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.39 E-value=5.1e-13 Score=140.55 Aligned_cols=139 Identities=22% Similarity=0.298 Sum_probs=95.8
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeecc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 185 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 185 (672)
..+..|++++|.+.+ +++ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+-.-.++|++|+|+
T Consensus 177 ~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 177 TDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIG 251 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECC
T ss_pred CCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECC
Confidence 357778888888774 443 7777778888888887775544 77777777788877777754441122677777777
Q ss_pred cccCcccCCchhhhhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 186 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 186 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
+|++++. +.+..+++|+.|++++|++++. |.. .+++|+.|+|++|++++..|..++++++|..+
T Consensus 252 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 252 TNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp SSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred CCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 7777753 4577777777777777777754 333 67777777777777777666666666666544
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.38 E-value=8.8e-13 Score=144.82 Aligned_cols=137 Identities=29% Similarity=0.338 Sum_probs=104.2
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeecc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 185 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 185 (672)
..+..|++++|.+.+..| ++.+++|+.|+|++|.+++. + .+..+++|+.|+|++|.+++..|-.-.++|++|+|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKDI-G-TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 273 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEEecCCccccccc---ccccCCCCEEECCCCCcccc-h-hhhcCCCCCEEECCCCccccchhhhcCCCCCEEECC
Confidence 457788888888876443 67788888888888888853 3 578888888888888888876652223788888888
Q ss_pred cccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCcc
Q 005875 186 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 251 (672)
Q Consensus 186 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 251 (672)
+|++++..| +..+++|+.|+|++|++++..|...+++|+.|+|++|++++..| +..+++|..
T Consensus 274 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 335 (466)
T 1o6v_A 274 ANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQR 335 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCE
T ss_pred CCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCE
Confidence 888886544 78888888888888888876665578888888888888887665 455555543
No 376
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=6.2e-13 Score=140.06 Aligned_cols=106 Identities=27% Similarity=0.379 Sum_probs=77.4
Q ss_pred CCcceeeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccC-CCcCCCCCCcCCCCCCCcEEeeeccCCCCCCC
Q 005875 94 QSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIP 172 (672)
Q Consensus 94 ~~w~gv~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 172 (672)
|.|.+|.|++. |+|+ .+|. |..+++|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++..|
T Consensus 8 C~~~~v~~~~~-----------n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECCSS-----------CCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcCCC-----------CCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 46777777531 1566 4776 88899999999996 99997777889999998888888888887666
Q ss_pred CCcc--cccceeecccccCcccCCchhhhhccccceecCCcccc
Q 005875 173 SSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLS 214 (672)
Q Consensus 173 ~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 214 (672)
..|. ++|++|+|++|+|++..|..|..++ |+.|+|++|.|.
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6655 6777777777777755444455444 666666666665
No 377
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.37 E-value=9.3e-13 Score=133.09 Aligned_cols=123 Identities=24% Similarity=0.292 Sum_probs=105.3
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
..+..|+|++|.+++ +++ ++.+++|++|+|++|+|++ +|. +.. ++|+.|+|++|++++. | .+. ++|++|+
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEE
Confidence 468899999999985 554 9999999999999999995 554 333 9999999999999964 4 344 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCC
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGS 238 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~ 238 (672)
|++|+|++. | .+..+++|+.|+|++|++++...-..+++|+.|++++|.+++.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999964 4 7999999999999999999872223899999999999999865
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.36 E-value=2.7e-12 Score=140.41 Aligned_cols=133 Identities=23% Similarity=0.221 Sum_probs=99.5
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcccccceeecc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 185 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 185 (672)
..+..|+|++|.+++ +| ++.+++|++|+|++|+|++ +| ++++++|++|++++|+..+.++-.-.++|++|+|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCS 178 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECC
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECC
Confidence 467889999998886 43 7888999999999999986 34 78888888888888876666643333778888888
Q ss_pred cccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 186 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 186 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
+|+|++ +| ++.+++|+.|++++|++++. +-..+++|+.|+|++|++++ +| ++.+++|..+
T Consensus 179 ~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L 238 (457)
T 3bz5_A 179 FNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYF 238 (457)
T ss_dssp SSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEE
T ss_pred CCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC--ccccCCCCEE
Confidence 888885 45 77778888888888888764 44477778888888888876 55 5566655543
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.35 E-value=1.8e-14 Score=151.05 Aligned_cols=147 Identities=23% Similarity=0.295 Sum_probs=99.0
Q ss_pred CeEEEEEeCCCCcccc-CCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc-CCCCC-CCCCcc--cccc
Q 005875 106 TRVFGLRLPGIGLVGP-IPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN-NFSGK-IPSSFS--PQLV 180 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~-~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~--~~L~ 180 (672)
.++..|+|++|.+++. +|. .+..+++|++|+|++|.+++..|..++++++|++|+|++| .+++. +|..+. ++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4566777777776654 555 5777777777777777777777777777777777777777 56642 343333 6777
Q ss_pred eeecccc-cCccc-CCchhhhhc-cccceecCCc--ccc-CCCCCC--CCCCCceEEeecCC-CCCCCCcccCCCCCCcc
Q 005875 181 VLDLSFN-SFTGN-IPQSIQNLT-QLTGLSLQSN--NLS-GSIPNF--DIPKLRHLNLSYNG-LKGSIPSSLQKFPNSSF 251 (672)
Q Consensus 181 ~L~ls~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~--~l~~L~~l~l~~N~-l~g~~p~~~~~~~~l~~ 251 (672)
+|+|++| ++++. ++..+.+++ +|+.|+|++| .++ +.+|.. .+++|+.|+|++|. +++..+..+.++++|..
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 7777777 77754 566677777 7777777777 344 333332 67777888888777 66666666666666665
Q ss_pred cc
Q 005875 252 VG 253 (672)
Q Consensus 252 ~~ 253 (672)
++
T Consensus 252 L~ 253 (336)
T 2ast_B 252 LS 253 (336)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.35 E-value=8.3e-13 Score=138.93 Aligned_cols=137 Identities=21% Similarity=0.271 Sum_probs=114.8
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 183 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 183 (672)
..+..+++++|.+.+. ++ +..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++. + .+. ++|++|+
T Consensus 199 ~~L~~L~l~~n~l~~~-~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~ 271 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDI-TP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N-AVKDLTKLKMLN 271 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred CccceeecccCCCCCC-ch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h-hHhcCCCcCEEE
Confidence 4678899999998854 32 8899999999999999996544 99999999999999999964 3 333 8999999
Q ss_pred cccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCcccc
Q 005875 184 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 184 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 253 (672)
|++|++++. +.+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..| +..+++|..++
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 999999964 46899999999999999999887764 89999999999999997766 66666665543
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.32 E-value=3.6e-14 Score=148.62 Aligned_cols=145 Identities=19% Similarity=0.268 Sum_probs=117.7
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCC-CCCcCCCCCCCcEEeeeccCCCCCCCCCcc--ccccee
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGG-LPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 182 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 182 (672)
..+..+++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|+|++|.+++..|..+. ++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 4577888999988877664 67899999999999999876 888889999999999999999877777665 789999
Q ss_pred ecccc-cCccc-CCchhhhhccccceecCCc-cccCC-CCCC--CCC-CCceEEeecC--CCC-CCCCcccCCCCCCccc
Q 005875 183 DLSFN-SFTGN-IPQSIQNLTQLTGLSLQSN-NLSGS-IPNF--DIP-KLRHLNLSYN--GLK-GSIPSSLQKFPNSSFV 252 (672)
Q Consensus 183 ~ls~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~--~l~-~L~~l~l~~N--~l~-g~~p~~~~~~~~l~~~ 252 (672)
+|++| .+++. +|..+.++++|+.|+|++| .+++. ++.. .++ +|++|+|++| .++ +.+|..+.++++|..+
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 99999 78863 7778899999999999999 88864 4442 778 9999999999 565 4566666666666554
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.31 E-value=5.9e-12 Score=142.27 Aligned_cols=132 Identities=27% Similarity=0.344 Sum_probs=71.8
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCc---CCCC--------------CCCcEEeeeccCCCC
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE---ITSL--------------PSLRYLYLQHNNFSG 169 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~---~~~l--------------~~L~~L~l~~N~l~g 169 (672)
.+..|+|++|++++ +|. .+++|++|+|++|+|++ +|.. +..| ++|+.|+|++|++++
T Consensus 122 ~L~~L~L~~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 122 GLCKLWIFGNQLTS-LPV----LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC
T ss_pred CcCEEECCCCCCCc-CCC----CCCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC
Confidence 45566666666653 554 13666666666666663 2222 2222 666777777777764
Q ss_pred CCCCCc-------------------ccccceeecccccCcccCCchhhhhccccceecCCccccCCCCCCCCCCCceEEe
Q 005875 170 KIPSSF-------------------SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNL 230 (672)
Q Consensus 170 ~~p~~~-------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l 230 (672)
+|..+ .++|++|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 196 -l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~L 268 (622)
T 3g06_A 196 -LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSV 268 (622)
T ss_dssp -CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEEC
T ss_pred -CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeC
Confidence 34322 1345555555555553 34 234555666666666653 333 4556666666
Q ss_pred ecCCCCCCCCcccCCCCCCccc
Q 005875 231 SYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 231 ~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
++|+|+ .+|..+.++++|..+
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEE
T ss_pred CCCCCC-cCCHHHhhccccCEE
Confidence 666666 556656555555443
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.29 E-value=6.9e-14 Score=149.67 Aligned_cols=148 Identities=20% Similarity=0.300 Sum_probs=93.8
Q ss_pred CeEEEEEeCCC---CccccCCccc------cCCCCCCcEEEccCCCcCC----CCCCcCCCCCCCcEEeeeccCCCCCCC
Q 005875 106 TRVFGLRLPGI---GLVGPIPNNT------LGKLDALEVLSLRSNVLTG----GLPSEITSLPSLRYLYLQHNNFSGKIP 172 (672)
Q Consensus 106 ~~v~~l~l~~~---~l~g~~p~~~------~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~~p 172 (672)
.++..|+|++| .+.+.+|.+. +..+++|++|+|++|.|++ .+|..+.++++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 34666777664 4555555421 3667777777777777776 466667777777777777777764333
Q ss_pred CCcc---------------cccceeecccccCc-ccCC---chhhhhccccceecCCcccc--C---CCC-CC-CCCCCc
Q 005875 173 SSFS---------------PQLVVLDLSFNSFT-GNIP---QSIQNLTQLTGLSLQSNNLS--G---SIP-NF-DIPKLR 226 (672)
Q Consensus 173 ~~~~---------------~~L~~L~ls~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p-~~-~l~~L~ 226 (672)
..+. ++|++|+|++|+|+ +.+| ..+.++++|+.|+|++|+|+ | .+| .. .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 3332 46777777777776 4444 45667777777777777776 2 233 22 567777
Q ss_pred eEEeecCCCC----CCCCcccCCCCCCcccc
Q 005875 227 HLNLSYNGLK----GSIPSSLQKFPNSSFVG 253 (672)
Q Consensus 227 ~l~l~~N~l~----g~~p~~~~~~~~l~~~~ 253 (672)
.|+|++|.++ +.+|..+.++++|..++
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 7777777775 55666666666655543
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=4.2e-12 Score=133.63 Aligned_cols=102 Identities=20% Similarity=0.168 Sum_probs=90.5
Q ss_pred cEEEccCC-CcCCCCCCcCCCCCCCcEEeeec-cCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecC
Q 005875 134 EVLSLRSN-VLTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 209 (672)
Q Consensus 134 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 209 (672)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|. ++|++|+|++|+|++..|..|++|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688988 899 6898 99999999999996 999987777776 899999999999999999999999999999999
Q ss_pred CccccCCCCCC-CCCCCceEEeecCCCCC
Q 005875 210 SNNLSGSIPNF-DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 210 ~N~l~~~~p~~-~l~~L~~l~l~~N~l~g 237 (672)
+|+|++.++.. ...+|+.|+|++|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877664 43449999999999984
No 385
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=2.7e-11 Score=122.10 Aligned_cols=136 Identities=17% Similarity=0.113 Sum_probs=107.6
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccc-cChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
..+|.|+++.||++... ++.+++|+..... .....+.+|.+++..+.++..+.++++++.+.+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 35677788999999855 6789999986532 234579999999999966888999999999888999999999999998
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 496 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~------------------------------------------- 496 (672)
+.+.. ......++.+++.+++.||+..
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76421 1123467889999999999811
Q ss_pred -------------CCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 497 -------------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 497 -------------~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876666799998764
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.23 E-value=3.5e-13 Score=144.16 Aligned_cols=148 Identities=20% Similarity=0.277 Sum_probs=116.2
Q ss_pred CeEEEEEeCCCCccccCCc---cccCCCCCCcEEEccCC---CcCCCCCCcC-------CCCCCCcEEeeeccCCCC---
Q 005875 106 TRVFGLRLPGIGLVGPIPN---NTLGKLDALEVLSLRSN---VLTGGLPSEI-------TSLPSLRYLYLQHNNFSG--- 169 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~---~~~~~l~~L~~L~L~~N---~l~g~~p~~~-------~~l~~L~~L~l~~N~l~g--- 169 (672)
.+++.|+|++|++.+..+. ..+..+++|++|+|++| ++++.+|..+ .++++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 4588999999998875332 14779999999999995 5667777666 789999999999999997
Q ss_pred -CCCCCcc--cccceeecccccCcccCCchh----hhh---------ccccceecCCcccc-CCCCC----C-CCCCCce
Q 005875 170 -KIPSSFS--PQLVVLDLSFNSFTGNIPQSI----QNL---------TQLTGLSLQSNNLS-GSIPN----F-DIPKLRH 227 (672)
Q Consensus 170 -~~p~~~~--~~L~~L~ls~N~l~~~~p~~~----~~l---------~~L~~L~l~~N~l~-~~~p~----~-~l~~L~~ 227 (672)
.+|..+. ++|++|+|++|.|++..+..+ ..+ ++|+.|+|++|+++ +.+|. . .+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4665655 799999999999986555444 444 89999999999998 45553 1 6789999
Q ss_pred EEeecCCCC--C---CCCcccCCCCCCcccc
Q 005875 228 LNLSYNGLK--G---SIPSSLQKFPNSSFVG 253 (672)
Q Consensus 228 l~l~~N~l~--g---~~p~~~~~~~~l~~~~ 253 (672)
|+|++|+++ | .+|..+.++++|..+.
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~ 222 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLD 222 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEE
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEE
Confidence 999999998 3 3454677777776654
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.23 E-value=4.3e-13 Score=142.19 Aligned_cols=133 Identities=24% Similarity=0.287 Sum_probs=70.4
Q ss_pred EEEEEeCCCCccccCCc---cccCCCC-CCcEEEccCCCcCCCCCCcCCCC-----CCCcEEeeeccCCCCCCCCCcc--
Q 005875 108 VFGLRLPGIGLVGPIPN---NTLGKLD-ALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS-- 176 (672)
Q Consensus 108 v~~l~l~~~~l~g~~p~---~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~-- 176 (672)
++.|+|++|.+++.-+. ..+..++ +|++|+|++|.|++..+..|..+ ++|++|+|++|++++..+..+.
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 55666666665533320 2455555 56666666666665555555443 5666666666666554443221
Q ss_pred -----cccceeecccccCcccCCchhhhh-----ccccceecCCccccCCCCC----C--CCC-CCceEEeecCCCCCCC
Q 005875 177 -----PQLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGSIPN----F--DIP-KLRHLNLSYNGLKGSI 239 (672)
Q Consensus 177 -----~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~----~--~l~-~L~~l~l~~N~l~g~~ 239 (672)
++|++|+|++|+|++..+..+... ++|+.|+|++|+|++..+. . .++ +|++|+|++|++++..
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 356666666666665544444331 4566666666666532221 0 222 5666666666665444
Q ss_pred C
Q 005875 240 P 240 (672)
Q Consensus 240 p 240 (672)
+
T Consensus 184 ~ 184 (362)
T 3goz_A 184 C 184 (362)
T ss_dssp H
T ss_pred H
Confidence 4
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.22 E-value=1.2e-12 Score=138.84 Aligned_cols=129 Identities=20% Similarity=0.145 Sum_probs=109.5
Q ss_pred EEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCC----CcCCCCC-CCcEEeeeccCCCCCCCCCcc-------cc
Q 005875 111 LRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP----SEITSLP-SLRYLYLQHNNFSGKIPSSFS-------PQ 178 (672)
Q Consensus 111 l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~l~~N~l~g~~p~~~~-------~~ 178 (672)
.+|+.++++|.+|. .+....+|++|+|++|.|++..+ ..+.+++ +|++|+|++|++++..+..+. ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57889999999987 67777789999999999997666 6788898 999999999999987776553 58
Q ss_pred cceeecccccCcccCCchhhhh-----ccccceecCCccccCCCCCC------C-CCCCceEEeecCCCCCCCC
Q 005875 179 LVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGSIPNF------D-IPKLRHLNLSYNGLKGSIP 240 (672)
Q Consensus 179 L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~------~-l~~L~~l~l~~N~l~g~~p 240 (672)
|++|+|++|+|++..+..+... ++|+.|+|++|+|++..+.. . .++|++|+|++|.+++.-+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 9999999999998888876665 89999999999998766532 3 3699999999999996443
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.22 E-value=7.8e-14 Score=134.66 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=105.8
Q ss_pred cCCCCCCcEEEccCCCcCCCCCC------cCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhh
Q 005875 127 LGKLDALEVLSLRSNVLTGGLPS------EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 198 (672)
Q Consensus 127 ~~~l~~L~~L~L~~N~l~g~~p~------~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~ 198 (672)
+.....++.++|+.|.|+|.+|. .+.++++|++|+|++|++++ +| .+. ++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55677889999999999999887 89999999999999999996 77 665 89999999999999 7899999
Q ss_pred hhccccceecCCccccCCCCCC-CCCCCceEEeecCCCCCCCC-cccCCCCCCcccc
Q 005875 199 NLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIP-SSLQKFPNSSFVG 253 (672)
Q Consensus 199 ~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~~ 253 (672)
.+++|+.|+|++|++++ +|.. .+++|+.|+|++|++++..+ ..+.++++|..+.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 99999999999999997 4444 78899999999999995332 4677777776553
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.14 E-value=8.2e-11 Score=123.96 Aligned_cols=140 Identities=15% Similarity=0.115 Sum_probs=107.1
Q ss_pred eeecCCCCeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCc-c-
Q 005875 99 INCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF-S- 176 (672)
Q Consensus 99 v~C~~~~~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~-~- 176 (672)
..|+.. .++.++++|+ .+|. .+ .++|++|+|++|+|+..-+..|.+|++|++|+|++|++.+.+|... .
T Consensus 7 C~C~~~-----~v~C~~~~Lt-~iP~-~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~ 77 (350)
T 4ay9_X 7 CHCSNR-----VFLCQESKVT-EIPS-DL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSN 77 (350)
T ss_dssp SEEETT-----EEEEESTTCC-SCCT-TC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCS
T ss_pred cEeeCC-----EEEecCCCCC-ccCc-Cc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhc
Confidence 567642 3677889998 7887 34 4689999999999994444579999999999999999988888654 3
Q ss_pred -cccc-eeecccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeec-CCCCCCCCcccCCCC
Q 005875 177 -PQLV-VLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSY-NGLKGSIPSSLQKFP 247 (672)
Q Consensus 177 -~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~-N~l~g~~p~~~~~~~ 247 (672)
++|+ .+++++|+|++..|..|.++++|+.|++++|+|++..+.. ...++..|++.+ |++....+..|..+.
T Consensus 78 L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 78 LPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp CTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred chhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 4444 5788889999888999999999999999999999766653 555677788866 445533334455443
No 391
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10 E-value=4e-10 Score=112.98 Aligned_cols=131 Identities=11% Similarity=0.085 Sum_probs=98.9
Q ss_pred ccc-ccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCc-eeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 382 VLG-KGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN-VVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 382 ~lG-~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.++ .|..+.||++...+++.+++|..... ....+.+|++++..+.+|.- +.+++++...++..++||||++|.++.
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 344 45569999998777788999987653 34568899999999855522 566888888877889999999998884
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 496 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~------------------------------------------- 496 (672)
... .+ ...++.+++..++.||+..
T Consensus 104 --~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 104 --SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp --TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred --cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 211 11 2256777888888888643
Q ss_pred ------------CCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 497 ------------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 497 ------------~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
.+.++|+|++|.||++++++.+.|+|||.+.
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999864
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.07 E-value=1.5e-12 Score=142.42 Aligned_cols=147 Identities=20% Similarity=0.092 Sum_probs=113.9
Q ss_pred CeEEEEEeCCCCcccc----CCccccCCCCCCcEEEccCCCcCCC----CCCcCCCCCCCcEEeeeccCCCCCCCCCcc-
Q 005875 106 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 176 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~- 176 (672)
..+..|+|++|.+.+. +.+..+..+++|++|+|++|.+++. +|..+.++++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 4678899999988753 2222344689999999999999864 677788899999999999998755444333
Q ss_pred ------cccceeecccccCccc----CCchhhhhccccceecCCccccCCCCCC-------CCCCCceEEeecCCCCC--
Q 005875 177 ------PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIPNF-------DIPKLRHLNLSYNGLKG-- 237 (672)
Q Consensus 177 ------~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~-------~l~~L~~l~l~~N~l~g-- 237 (672)
++|++|+|++|.+++. +|..+.++++|+.|+|++|++++..+.. ..++|+.|+|++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 4899999999999876 6777888899999999999988654321 26789999999999986
Q ss_pred --CCCcccCCCCCCccc
Q 005875 238 --SIPSSLQKFPNSSFV 252 (672)
Q Consensus 238 --~~p~~~~~~~~l~~~ 252 (672)
.+|..+.++++|..+
T Consensus 387 ~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 387 CSSLAATLLANHSLREL 403 (461)
T ss_dssp HHHHHHHHHHCCCCCEE
T ss_pred HHHHHHHHHhCCCccEE
Confidence 777777666666554
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.03 E-value=1.7e-12 Score=142.02 Aligned_cols=136 Identities=20% Similarity=0.214 Sum_probs=107.2
Q ss_pred CeEEEEEeCCCCcccc----CCccccCCCCCCcEEEccCCCcCCCC-----CCcCCCCCCCcEEeeeccCCCCC----CC
Q 005875 106 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGGL-----PSEITSLPSLRYLYLQHNNFSGK----IP 172 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~l~~N~l~g~----~p 172 (672)
.++..|+|++|++++. ++. .+..+++|++|+|++|.+++.- +..+..+++|++|+|++|.+++. +|
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 3788999999998863 555 6888999999999999987532 33344689999999999999854 45
Q ss_pred CCcc--cccceeecccccCcccCCchhhhh-----ccccceecCCccccCC----CCCC--CCCCCceEEeecCCCCCCC
Q 005875 173 SSFS--PQLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGS----IPNF--DIPKLRHLNLSYNGLKGSI 239 (672)
Q Consensus 173 ~~~~--~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~----~p~~--~l~~L~~l~l~~N~l~g~~ 239 (672)
..+. ++|++|+|++|.|++..+..+... ++|+.|+|++|.+++. ++.. .+++|+.|+|++|.+++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 5554 789999999999987766666654 6999999999999865 2332 6789999999999998654
Q ss_pred Ccc
Q 005875 240 PSS 242 (672)
Q Consensus 240 p~~ 242 (672)
+..
T Consensus 358 ~~~ 360 (461)
T 1z7x_W 358 VRE 360 (461)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.03 E-value=9e-13 Score=132.10 Aligned_cols=158 Identities=20% Similarity=0.195 Sum_probs=115.4
Q ss_pred CcceeeecCCCCeEEEEEeCC---CCccccCCccccCCCCCCcEEEccCCCcCCCCCC-cCCCCCCCcE--EeeeccCCC
Q 005875 95 SWVGINCTQDRTRVFGLRLPG---IGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRY--LYLQHNNFS 168 (672)
Q Consensus 95 ~w~gv~C~~~~~~v~~l~l~~---~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~--L~l~~N~l~ 168 (672)
.|.|+.|+..+.+|+.+...+ ..+.|.++++.+..|+. .|...+|..++.++- .+...+.|.. ++++.|+..
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 799999998766776666655 45667777655555554 456666777766653 2666666766 788888654
Q ss_pred CCCCCCc------ccccceeecccccCcc--cCCchhhhhccccceecCCccccCCCCCCCCC--CCceEEeecCCCCCC
Q 005875 169 GKIPSSF------SPQLVVLDLSFNSFTG--NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP--KLRHLNLSYNGLKGS 238 (672)
Q Consensus 169 g~~p~~~------~~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~--~L~~l~l~~N~l~g~ 238 (672)
.++..+ .++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|+.|+|++|.+++.
T Consensus 157 -~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 157 -CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp -HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGG
T ss_pred -HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCccc
Confidence 333322 1689999999999998 66788899999999999999999752212233 999999999999988
Q ss_pred CCc-------ccCCCCCCccccCC
Q 005875 239 IPS-------SLQKFPNSSFVGNS 255 (672)
Q Consensus 239 ~p~-------~~~~~~~l~~~~n~ 255 (672)
+|. .+..+++|..++..
T Consensus 236 ~~~~~~y~~~il~~~P~L~~LDg~ 259 (267)
T 3rw6_A 236 FRDQSTYISAIRERFPKLLRLDGH 259 (267)
T ss_dssp CSSHHHHHHHHHHHCTTCCEESSC
T ss_pred cCcchhHHHHHHHHCcccCeECCc
Confidence 873 36788888888753
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=1.8e-09 Score=113.98 Aligned_cols=140 Identities=15% Similarity=0.223 Sum_probs=105.4
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEec--ccc--cChhhHHHHHHHHHHHcC-CCceeceEEEEEeC---CeeEEEEEe
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLK--EVV--VGKRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSK---DEKLLVYDY 452 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~--~~~--~~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~---~~~~lV~e~ 452 (672)
+.++.|.++.||+....+ ..+++|+.. ... .....+.+|..++..+.. +..++++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 468889999999998764 678888775 322 234578899999999853 45688899988766 347999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 005875 453 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------ 496 (672)
Q Consensus 453 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~------------------------------------ 496 (672)
++|..+.+.. ...++..++..++.+++..|+.||+..
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9998775422 123778888999999999999999731
Q ss_pred -------------------CCCcccCCCCCCCEEecCCCC--eEEeecCCCCC
Q 005875 497 -------------------GPKFTHGNIKASNVLINQDLD--GCISDFGLTPL 528 (672)
Q Consensus 497 -------------------~~~ivHrDLk~~NILl~~~~~--~kl~DfGla~~ 528 (672)
.+.++|+|+++.||++++++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245899999999999998764 68999998754
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.85 E-value=1.7e-09 Score=111.49 Aligned_cols=182 Identities=18% Similarity=0.247 Sum_probs=120.9
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCc--eeceEEEEEeCC---eeEEEEEecCC
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN--VVPLRAYYYSKD---EKLLVYDYFAS 455 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n--iv~l~~~~~~~~---~~~lV~e~~~~ 455 (672)
+.++.|.+..||+.. ..+++|+.... .....+.+|.+++..+..+.. +.+.+......+ ..|+|||+++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 358899999999864 56888875432 234678899999988854433 344554443332 34799999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 005875 456 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--------------------------------------- 496 (672)
Q Consensus 456 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~--------------------------------------- 496 (672)
.++.+... ..++..++..++.+++..++.||+..
T Consensus 101 ~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 88875432 12677788888888888888888621
Q ss_pred ----------------CCCcccCCCCCCCEEecC--CCCeEEeecCCCCCCCCCCC----CC----CCC--------cc-
Q 005875 497 ----------------GPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPAT----PS----RSA--------GY- 541 (672)
Q Consensus 497 ----------------~~~ivHrDLk~~NILl~~--~~~~kl~DfGla~~~~~~~~----~~----~~~--------~y- 541 (672)
.+.++|+|+++.||++++ ...+.|+||+.+........ .. ..+ .|
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 134799999999999998 45678999998765322110 00 000 01
Q ss_pred -cC-cccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 005875 542 -RA-PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 576 (672)
Q Consensus 542 -~a-PE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~ 576 (672)
.. |+.... .....+.|+++.++|.+.+|..+|-
T Consensus 254 ~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 254 HKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11 111111 1122589999999999999987763
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.82 E-value=7.3e-11 Score=125.24 Aligned_cols=133 Identities=17% Similarity=0.183 Sum_probs=95.6
Q ss_pred CeEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcC-----CCCCCCcEEeeeccCCCCC----CCCCcc
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEI-----TSLPSLRYLYLQHNNFSGK----IPSSFS 176 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~l~~N~l~g~----~p~~~~ 176 (672)
..++.|+|++|.++..-.......+.+|+.|+|++|.|+..-...+ ...++|+.|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4789999999988643333233456789999999999975433333 3567899999999998742 222222
Q ss_pred --cccceeecccccCccc----CCchhhhhccccceecCCccccCCCC----CC--CCCCCceEEeecCCCCCC
Q 005875 177 --PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIP----NF--DIPKLRHLNLSYNGLKGS 238 (672)
Q Consensus 177 --~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p----~~--~l~~L~~l~l~~N~l~g~ 238 (672)
++|++|+|++|+|+.. ++..+..+++|+.|+|++|.|+..-. .. ..++|++|+|++|.++..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 6799999999998853 45667788899999999999874221 11 457899999999988743
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.79 E-value=7.9e-09 Score=107.70 Aligned_cols=141 Identities=18% Similarity=0.205 Sum_probs=90.4
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCC----CCCCCCCc-------
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF----SGKIPSSF------- 175 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l----~g~~p~~~------- 175 (672)
.++.|+|++ +++ .|++.+|.++++|+.|+|++|.+...-+..|.++.+|..|.++.+.. ...-+..|
T Consensus 102 ~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 102 TLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 466777777 666 57777788888888888888877644445566665555555444211 00000000
Q ss_pred ---------------------------------------------ccccceeecccccCcccCCchhhhhccccceecCC
Q 005875 176 ---------------------------------------------SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS 210 (672)
Q Consensus 176 ---------------------------------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 210 (672)
.++|+.|+|++|+++...+.+|.+|++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 24788888888888866666788888888888888
Q ss_pred ccccCCCCC-C--CCCCCc-eEEeecCCCCCCCCcccCCCCCCccc
Q 005875 211 NNLSGSIPN-F--DIPKLR-HLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 211 N~l~~~~p~-~--~l~~L~-~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
| ++ .++. . ++++|+ .++|.+ +++..-+..|.++++|..+
T Consensus 260 n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 260 N-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp T-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred c-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 7 55 3443 2 777787 888877 6664445677777776655
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=6.5e-09 Score=108.32 Aligned_cols=131 Identities=13% Similarity=0.165 Sum_probs=93.5
Q ss_pred cCCccccCC--------CCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccC-
Q 005875 121 PIPNNTLGK--------LDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSF- 189 (672)
Q Consensus 121 ~~p~~~~~~--------l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l- 189 (672)
.||+..|.+ +++|+.|+|.+ +++..-+..|.+|++|+.|+|++|.++...+..|. .++..+.++.+..
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~ 161 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY 161 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh
Confidence 567778888 99999999999 88855557799999999999999999855555565 3455555444211
Q ss_pred -----------c--------------ccCCch---------------------------h-hhhccccceecCCccccCC
Q 005875 190 -----------T--------------GNIPQS---------------------------I-QNLTQLTGLSLQSNNLSGS 216 (672)
Q Consensus 190 -----------~--------------~~~p~~---------------------------~-~~l~~L~~L~l~~N~l~~~ 216 (672)
. +.+|.. + ..+++|+.|+|++|+++..
T Consensus 162 ~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I 241 (329)
T 3sb4_A 162 RFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTI 241 (329)
T ss_dssp HTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEE
T ss_pred hccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCccee
Confidence 0 001110 0 1378999999999999844
Q ss_pred CCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCc-ccc
Q 005875 217 IPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS-FVG 253 (672)
Q Consensus 217 ~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~-~~~ 253 (672)
.+.. .+++|+.|+|.+| ++..-+..|.++++|. .+.
T Consensus 242 ~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 242 PDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 3332 8999999999998 7744456788888887 443
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.72 E-value=5.1e-11 Score=126.44 Aligned_cols=145 Identities=22% Similarity=0.246 Sum_probs=103.4
Q ss_pred eEEEEEeCCCCccccCCccccC-----CCCCCcEEEccCCCcCCCCCCcC-CCCCCCcEEeeeccCCCCCCCCCcc----
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLG-----KLDALEVLSLRSNVLTGGLPSEI-TSLPSLRYLYLQHNNFSGKIPSSFS---- 176 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~-----~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~~p~~~~---- 176 (672)
.+..|+|++|.++..-.. .+. ...+|++|+|++|.|+..-...+ ..+++|+.|+|++|.++......+.
T Consensus 73 ~L~~L~Ls~n~l~~~~~~-~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCT-VVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TCCEEECTTSCCCHHHHH-HHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hCCEEEecCCCCCHHHHH-HHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 467899999988743222 232 23799999999999975433333 3567899999999999854333332
Q ss_pred ---cccceeecccccCcc----cCCchhhhhccccceecCCccccCCC----CC--CCCCCCceEEeecCCCCCC----C
Q 005875 177 ---PQLVVLDLSFNSFTG----NIPQSIQNLTQLTGLSLQSNNLSGSI----PN--FDIPKLRHLNLSYNGLKGS----I 239 (672)
Q Consensus 177 ---~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~----p~--~~l~~L~~l~l~~N~l~g~----~ 239 (672)
++|++|+|++|+|+. .++..+..+++|+.|+|++|.|+..- +. ...++|+.|+|++|.++.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 679999999999985 35566788999999999999998422 21 1567899999999999752 3
Q ss_pred CcccCCCCCCccc
Q 005875 240 PSSLQKFPNSSFV 252 (672)
Q Consensus 240 p~~~~~~~~l~~~ 252 (672)
+..+...++|..+
T Consensus 232 ~~~L~~~~~L~~L 244 (372)
T 3un9_A 232 ARAAREHPSLELL 244 (372)
T ss_dssp HHHHHHCSSCCEE
T ss_pred HHHHHhCCCCCEE
Confidence 3334334444444
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.54 E-value=1.7e-09 Score=122.02 Aligned_cols=109 Identities=15% Similarity=0.101 Sum_probs=54.2
Q ss_pred CCCCCCcEEEccCCCcCCCCCCcCCC-CCCCcEEeee----ccCCCCC-----CCCCcc--cccceeecccc--cCcccC
Q 005875 128 GKLDALEVLSLRSNVLTGGLPSEITS-LPSLRYLYLQ----HNNFSGK-----IPSSFS--PQLVVLDLSFN--SFTGNI 193 (672)
Q Consensus 128 ~~l~~L~~L~L~~N~l~g~~p~~~~~-l~~L~~L~l~----~N~l~g~-----~p~~~~--~~L~~L~ls~N--~l~~~~ 193 (672)
..+++|++|+|+.|.+++..+..++. +++|+.|+|+ .|++++. ++..+. ++|+.|+|++| .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 34566666666666666555545544 5666666664 4555532 111111 45555555532 245444
Q ss_pred Cchhhh-hccccceecCCccccC-CCCC--CCCCCCceEEeecCCCC
Q 005875 194 PQSIQN-LTQLTGLSLQSNNLSG-SIPN--FDIPKLRHLNLSYNGLK 236 (672)
Q Consensus 194 p~~~~~-l~~L~~L~l~~N~l~~-~~p~--~~l~~L~~l~l~~N~l~ 236 (672)
+..++. +++|+.|+|++|++++ .++. ..+++|+.|+|++|.++
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 444433 5555555555555543 1222 14455555555555554
No 402
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.48 E-value=8.7e-07 Score=89.18 Aligned_cols=135 Identities=16% Similarity=0.166 Sum_probs=97.6
Q ss_pred cccccCcE-EEEEEEEC-CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 382 VLGKGSYG-TAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 382 ~lG~G~fg-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.+..|..| .||+.... ++..+++|+-... ...++.+|...+..+..+--+.++++++.+.+..++|||+++|.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34446554 68988754 4567888876543 24568889999998866666888999999999999999999998887
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 005875 460 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 496 (672)
Q Consensus 460 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~------------------------------------------- 496 (672)
+..... ......+..+++..++.||...
T Consensus 109 ~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 665321 1223345556666666666421
Q ss_pred ------------CCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 497 ------------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 497 ------------~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
.+.++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1137899999999999988777899998764
No 403
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.46 E-value=4.9e-09 Score=99.63 Aligned_cols=111 Identities=14% Similarity=0.193 Sum_probs=79.7
Q ss_pred ccCCCCCCcEEEccCC-CcCCC----CCCcCCCCCCCcEEeeeccCCCCCCCCCcc------cccceeecccccCccc--
Q 005875 126 TLGKLDALEVLSLRSN-VLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS------PQLVVLDLSFNSFTGN-- 192 (672)
Q Consensus 126 ~~~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~------~~L~~L~ls~N~l~~~-- 192 (672)
.+...++|++|+|++| .|... +...+...++|++|+|++|.+...-...+. ++|++|+|++|+|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 5677888888999888 87632 344566778889999999988742222222 5788999999988854
Q ss_pred --CCchhhhhccccceec--CCccccCCCC----CC--CCCCCceEEeecCCCC
Q 005875 193 --IPQSIQNLTQLTGLSL--QSNNLSGSIP----NF--DIPKLRHLNLSYNGLK 236 (672)
Q Consensus 193 --~p~~~~~l~~L~~L~l--~~N~l~~~~p----~~--~l~~L~~l~l~~N~l~ 236 (672)
+...+...++|+.|+| ++|.|...-. .. ..++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4566777788999999 7888874221 11 4578999999988875
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.45 E-value=7.2e-07 Score=92.37 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=97.3
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcC--C-CceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQ--H-PNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~--h-~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
+.++.|....||+. ++.+++|+..... ....+.+|.+++..+.+ . ..+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 46889999999998 5678888764322 23468899999998843 1 234555554 56789999999988
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG---------------------------------------- 497 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~---------------------------------------- 497 (672)
+.+... ..++..+...++.+++..++.||+...
T Consensus 114 l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 864332 125677777888888888888885432
Q ss_pred --------------------CCcccCCCCCCCEEecCCCCeEEeecCCCCC
Q 005875 498 --------------------PKFTHGNIKASNVLINQDLDGCISDFGLTPL 528 (672)
Q Consensus 498 --------------------~~ivHrDLk~~NILl~~~~~~kl~DfGla~~ 528 (672)
+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2249999999999999976679999998744
No 405
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=1.3e-07 Score=94.62 Aligned_cols=75 Identities=28% Similarity=0.467 Sum_probs=42.3
Q ss_pred CCCCCcEEeeeccCCCC--CCCCCcc--cccceeecccccCcccCCchhhhhc--cccceecCCccccCCCCCC------
Q 005875 153 SLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLT--QLTGLSLQSNNLSGSIPNF------ 220 (672)
Q Consensus 153 ~l~~L~~L~l~~N~l~g--~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~~------ 220 (672)
++++|+.|+|++|+|++ .+|..+. ++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++.+|..
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 45566666666666665 3333322 5666666666666643 3344444 6666666666666655531
Q ss_pred ---CCCCCceEE
Q 005875 221 ---DIPKLRHLN 229 (672)
Q Consensus 221 ---~l~~L~~l~ 229 (672)
.+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 456666665
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.39 E-value=1.1e-08 Score=115.43 Aligned_cols=141 Identities=16% Similarity=0.109 Sum_probs=89.9
Q ss_pred eEEEEEeCCCC-ccc-cCCccccCCCCCCcEEEccCCCcCCC----CCCcCCCCCCCcEEeeeccCCCCCCCCCcc----
Q 005875 107 RVFGLRLPGIG-LVG-PIPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS---- 176 (672)
Q Consensus 107 ~v~~l~l~~~~-l~g-~~p~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~---- 176 (672)
++..|+|+++. ++. .++. ...++++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++.-+..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 37788888775 211 1221 334778899999999988765 444556788899999999988743333322
Q ss_pred --cccceeecccccCcccCCchhhhhccccceecCCccccC---CCCC--CCCCCCceEEeecCCCCCCCCcccCCCCCC
Q 005875 177 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG---SIPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNS 249 (672)
Q Consensus 177 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~---~~p~--~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 249 (672)
++|++|+|++|.+++ +|..+.++++|+.|+++++.... ..+. ..+++|+.|+++++. .+.+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCC
Confidence 688999999988885 77888888888888887533221 1111 145566666666643 22455544444444
Q ss_pred c
Q 005875 250 S 250 (672)
Q Consensus 250 ~ 250 (672)
.
T Consensus 296 ~ 296 (592)
T 3ogk_B 296 R 296 (592)
T ss_dssp C
T ss_pred c
Confidence 3
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.31 E-value=4.8e-06 Score=85.57 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=94.4
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCC--ceeceEEEEE-eCCeeEEEEEecCCCc
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP--NVVPLRAYYY-SKDEKLLVYDYFASGS 457 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~--niv~l~~~~~-~~~~~~lV~e~~~~g~ 457 (672)
+.++.|....||+. ++.+++|+-.. ......+.+|.+++..+.+|- .+.+.+.+.. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788888999988 56788887432 222457889999999995542 3566777764 3456789999999988
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 005875 458 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG----------------------------------------- 496 (672)
Q Consensus 458 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~----------------------------------------- 496 (672)
+.+.... .++..+...++.+++..|+.||+..
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8763211 1445555566666666666666422
Q ss_pred ----------------CCCcccCCCCCCCEEecC---CCCe-EEeecCCCCC
Q 005875 497 ----------------GPKFTHGNIKASNVLINQ---DLDG-CISDFGLTPL 528 (672)
Q Consensus 497 ----------------~~~ivHrDLk~~NILl~~---~~~~-kl~DfGla~~ 528 (672)
.+.++|+|+++.||++++ ++.+ .|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 234699999999999998 4554 7999997643
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.29 E-value=1.7e-06 Score=90.82 Aligned_cols=80 Identities=14% Similarity=0.139 Sum_probs=57.7
Q ss_pred ccc-cccCcEEEEEEEEC-------CCcEEEEEEecccc---c-ChhhHHHHHHHHHHHcCC--CceeceEEEEEeC---
Q 005875 381 EVL-GKGSYGTAYKAVLE-------ESTTVVVKRLKEVV---V-GKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSK--- 443 (672)
Q Consensus 381 ~~l-G~G~fg~Vy~~~~~-------~~~~vavK~l~~~~---~-~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~--- 443 (672)
+.| +.|....+|+.... +++.+++|+..... . ....+.+|..++..+..+ -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999998764 25678888765432 1 235788999999888655 3577788887655
Q ss_pred CeeEEEEEecCCCchhh
Q 005875 444 DEKLLVYDYFASGSLST 460 (672)
Q Consensus 444 ~~~~lV~e~~~~g~L~~ 460 (672)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877654
No 409
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.26 E-value=5.7e-06 Score=84.13 Aligned_cols=74 Identities=15% Similarity=0.198 Sum_probs=58.7
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccc-cChhhHHHHHHHHHHHcCC--CceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
+.||.|.++.||++...+|+.+++|+..... .....+..|++.+..+.++ ..+++++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 4689999999999999889999999865432 2346789999999999432 3577888763 4689999999986
Q ss_pred h
Q 005875 458 L 458 (672)
Q Consensus 458 L 458 (672)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 410
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=8e-06 Score=85.97 Aligned_cols=74 Identities=8% Similarity=-0.024 Sum_probs=55.8
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCC-CceeceEEEEEeC-CeeEEEEEecCCCch
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRAYYYSK-DEKLLVYDYFASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~-~~~~lV~e~~~~g~L 458 (672)
+.++.|....+|+... +++.+++|..... ..+..|..++..+..+ -.+.++++++... +..++||||++|..+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 4578899999999886 4778888876432 3688999999988543 2356777777764 568999999998766
Q ss_pred h
Q 005875 459 S 459 (672)
Q Consensus 459 ~ 459 (672)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.18 E-value=4e-08 Score=110.76 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=25.3
Q ss_pred EEEEEeCCCCccccCCccccC-CCCCCcEEEccCC-CcCCC-CCCcCCCCCCCcEEeeeccCCCC
Q 005875 108 VFGLRLPGIGLVGPIPNNTLG-KLDALEVLSLRSN-VLTGG-LPSEITSLPSLRYLYLQHNNFSG 169 (672)
Q Consensus 108 v~~l~l~~~~l~g~~p~~~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~l~~N~l~g 169 (672)
++.|+|+++.+++..+. .+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++
T Consensus 107 L~~L~L~~~~~~~~~~~-~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~ 170 (594)
T 2p1m_B 107 LEEIRLKRMVVTDDCLE-LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDD 170 (594)
T ss_dssp CCEEEEESCBCCHHHHH-HHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEEC
T ss_pred CCeEEeeCcEEcHHHHH-HHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCC
Confidence 44444444444433332 222 3444555555444 33211 22222344445555555544443
No 412
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.17 E-value=2.3e-08 Score=112.69 Aligned_cols=107 Identities=18% Similarity=0.108 Sum_probs=63.2
Q ss_pred CCCCCcEEEccCCCcCCCCCCcCC-CCCCCcEEeee--c----cCCCCCCCC--C----c--ccccceeecccccCcccC
Q 005875 129 KLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQ--H----NNFSGKIPS--S----F--SPQLVVLDLSFNSFTGNI 193 (672)
Q Consensus 129 ~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~l~--~----N~l~g~~p~--~----~--~~~L~~L~ls~N~l~~~~ 193 (672)
.+++|++|+++.|.+++..+..+. ++++|+.|+|+ + |.+++ .|. . + .++|+.|+|++ .+++..
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 366777777777777655554444 46777777777 3 44442 111 1 1 15677777765 566555
Q ss_pred Cchhhh-hccccceecCCccccCCCCCC---CCCCCceEEeecCCCCC
Q 005875 194 PQSIQN-LTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLKG 237 (672)
Q Consensus 194 p~~~~~-l~~L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l~g 237 (672)
+..++. +++|+.|+|++|.+++..+.. .+++|+.|+|++|.+++
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 555554 666777777777765432221 46677777777777643
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.10 E-value=1.5e-07 Score=89.30 Aligned_cols=108 Identities=16% Similarity=0.209 Sum_probs=82.2
Q ss_pred CeEEEEEeCCC-Ccccc----CCccccCCCCCCcEEEccCCCcCCC----CCCcCCCCCCCcEEeeeccCCCCC----CC
Q 005875 106 TRVFGLRLPGI-GLVGP----IPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGK----IP 172 (672)
Q Consensus 106 ~~v~~l~l~~~-~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----~p 172 (672)
..++.|+|++| ++... +.. .+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 46888999998 76532 222 567789999999999999742 344556668999999999999853 22
Q ss_pred CCcc--cccceeec--ccccCccc----CCchhhhhccccceecCCcccc
Q 005875 173 SSFS--PQLVVLDL--SFNSFTGN----IPQSIQNLTQLTGLSLQSNNLS 214 (672)
Q Consensus 173 ~~~~--~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 214 (672)
..+. ++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2333 68999999 88999864 4456666789999999999985
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.05 E-value=1.1e-06 Score=92.48 Aligned_cols=126 Identities=21% Similarity=0.255 Sum_probs=62.9
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCC--CCCCCcEEeeec--cCCCCC---------CCC
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEIT--SLPSLRYLYLQH--NNFSGK---------IPS 173 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~---------~p~ 173 (672)
++..|+|.++.- -.+++ +. +++|+.|+|..+.++......+. .+++|+.|+|+. |...|. +..
T Consensus 173 ~L~~L~L~g~~~-l~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 173 LLNNLKIKGTNN-LSIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TCCEEEEECCBT-CBCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCcEEEEeCCCC-ceecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 455666655421 12332 22 56666666666665432222232 566666666643 221111 000
Q ss_pred CcccccceeecccccCcccCCchhh---hhccccceecCCccccCC----CCCC--CCCCCceEEeecCCCC
Q 005875 174 SFSPQLVVLDLSFNSFTGNIPQSIQ---NLTQLTGLSLQSNNLSGS----IPNF--DIPKLRHLNLSYNGLK 236 (672)
Q Consensus 174 ~~~~~L~~L~ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~p~~--~l~~L~~l~l~~N~l~ 236 (672)
.-.++|+.|+|++|.+++..+..+. .+++|+.|+|+.|.|++. ++.. .+++|+.|+|++|.++
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 1125666666666666654443333 356666666666666542 2211 4566666666666655
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.00 E-value=1.6e-05 Score=84.76 Aligned_cols=135 Identities=16% Similarity=0.145 Sum_probs=69.6
Q ss_pred EEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc-cccceeeccc
Q 005875 108 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS-PQLVVLDLSF 186 (672)
Q Consensus 108 v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~~L~~L~ls~ 186 (672)
++.+.|+++ +. .|+..+|.+ .+|+.++|.+ .++..-+..|.+|++|+.++|++|+++..-...|. .+|+.+.|.+
T Consensus 137 L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~ 212 (401)
T 4fdw_A 137 IAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPV 212 (401)
T ss_dssp CSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCT
T ss_pred ccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCC
Confidence 555556544 33 455555655 3566666664 55533345566666666666666666632222333 5666666663
Q ss_pred ccCcccCCchhhhhccccceecCCccccCCCCC--CCCCCCceEEeecCCCCCCCCcccCCCCCCc
Q 005875 187 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 250 (672)
Q Consensus 187 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 250 (672)
| ++..-..+|.+|++|+.|+|.+| ++ .++. +.-.+|+.+.| .|.++..-+..|.++++|.
T Consensus 213 ~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 213 T-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELA 274 (401)
T ss_dssp T-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCC
T ss_pred c-hheehhhHhhCCCCCCEEecCCC-cc-CccccccccCCccEEEe-CCCccEEChhHhhCCCCCC
Confidence 3 55445556666666666666654 22 2222 12245555555 2333322233444444443
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.00 E-value=9.4e-06 Score=86.62 Aligned_cols=123 Identities=15% Similarity=0.184 Sum_probs=72.1
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
.++.+.|++ ++. .|+...|.++.+|+.++|++|+++ .+|......++|+.+.|..| ++..-...|. ++|+.++|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 467777775 455 566668888888888888888887 55544333577777777744 5533333343 56777777
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCCC--CCCCCceEEeecCCCC
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLK 236 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~ 236 (672)
.+| ++..-..+|.+ .+|+.+.| .|.++...+.. .+++|+.+++.+|.+.
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 654 44333445555 55666666 33343211211 5556666666655543
No 417
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.89 E-value=7.7e-05 Score=79.42 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=50.0
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEecccc--------cChhhHHHHHHHHHHHcCC-Cc-eeceEEEEEeCCeeEEE
Q 005875 381 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--------VGKRDFEQQMEIVGRVGQH-PN-VVPLRAYYYSKDEKLLV 449 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~~e~~~l~~l~~h-~n-iv~l~~~~~~~~~~~lV 449 (672)
+.+|.|.++.||++... +++.+++|...... ...+.+..|.+++..+..+ +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 46789999765321 1234567888888887543 33 4455543 45567899
Q ss_pred EEecCCC
Q 005875 450 YDYFASG 456 (672)
Q Consensus 450 ~e~~~~g 456 (672)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999874
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87 E-value=5.1e-05 Score=78.72 Aligned_cols=142 Identities=15% Similarity=0.226 Sum_probs=79.9
Q ss_pred cccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCC-CceeceEE------EEEeCCeeEEEEEecC
Q 005875 382 VLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRA------YYYSKDEKLLVYDYFA 454 (672)
Q Consensus 382 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~------~~~~~~~~~lV~e~~~ 454 (672)
.|+.|..+.||+....++ .+++|+... ...+...|..++..+.++ -.+.+++. +....+..++||||++
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 466677889999987654 588888765 234455566666555321 12344433 1234667899999999
Q ss_pred CCchh--------------hhhccCC-C---C-CC----CCCCHHHH-------------------------------HH
Q 005875 455 SGSLS--------------TLLHGNR-G---A-GR----TPLDWETR-------------------------------VK 480 (672)
Q Consensus 455 ~g~L~--------------~~l~~~~-~---~-~~----~~l~~~~~-------------------------------~~ 480 (672)
|..+. ..+|... . . .. ..-.|... ..
T Consensus 115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
T 2q83_A 115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG 194 (346)
T ss_dssp CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 86542 1111110 0 0 00 01123211 01
Q ss_pred HHHHHHHHHHHHHh--------c--CCCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 481 ILLGTARGVAHIHS--------M--GGPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 481 i~~~ia~gl~~LH~--------~--~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
+...+..++++|++ . ..+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11123345666653 1 23459999999999999888899999998753
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=8.1e-05 Score=76.33 Aligned_cols=140 Identities=18% Similarity=0.169 Sum_probs=92.0
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCC--CceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
+.|+.|.+..+|+.... ++.+++|+.... ....+..|.+.+..+..+ ..+++++++....+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 35788999999999864 678888886543 256788999998888543 6788899998888889999999998754
Q ss_pred hh-----------hhccCCC-C--C--------------CCCCCHHHHH---HHHH----------------HHHHH-HH
Q 005875 459 ST-----------LLHGNRG-A--G--------------RTPLDWETRV---KILL----------------GTARG-VA 490 (672)
Q Consensus 459 ~~-----------~l~~~~~-~--~--------------~~~l~~~~~~---~i~~----------------~ia~g-l~ 490 (672)
.. .+|.... . + .-.-+|.... ++.. .+..- ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 2232211 0 0 0012454321 1111 11111 12
Q ss_pred HHHh-cCCCCcccCCCCCCCEEecCCCCeEEeecC
Q 005875 491 HIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFG 524 (672)
Q Consensus 491 ~LH~-~~~~~ivHrDLk~~NILl~~~~~~kl~DfG 524 (672)
.|.. ...+.++|+|+.+.|++++.++ +.|+||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3321 2246799999999999999887 8899974
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.71 E-value=4.4e-06 Score=87.74 Aligned_cols=127 Identities=19% Similarity=0.286 Sum_probs=85.3
Q ss_pred CeEEEEEeCCCCccccCCcccc--CCCCCCcEEEccC--CCcCCC-----CCCcC--CCCCCCcEEeeeccCCCCCCCCC
Q 005875 106 TRVFGLRLPGIGLVGPIPNNTL--GKLDALEVLSLRS--NVLTGG-----LPSEI--TSLPSLRYLYLQHNNFSGKIPSS 174 (672)
Q Consensus 106 ~~v~~l~l~~~~l~g~~p~~~~--~~l~~L~~L~L~~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~l~g~~p~~ 174 (672)
.++..|+|..+++....-. .+ ..+++|++|+|+. |...|. +-..+ ..+++|++|+|++|.+.+..+..
T Consensus 193 ~~L~~L~L~~~~l~~~~l~-~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVE-DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp TTCSEEEEECSBCCHHHHH-HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHH-HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 3577788877766532221 23 3789999999964 222221 11122 35899999999999987543322
Q ss_pred c-----ccccceeecccccCccc----CCchhhhhccccceecCCccccCCCCCCCCCC--CceEEeecCC
Q 005875 175 F-----SPQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPK--LRHLNLSYNG 234 (672)
Q Consensus 175 ~-----~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~--L~~l~l~~N~ 234 (672)
+ .++|++|+|+.|.|++. ++..+.++++|+.|+|++|.|+...-. .+.. ...+++++|+
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~-~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKK-ELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHH-HHHHHCCSEEECCSBC
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHH-HHHHHcCCEEEecCCc
Confidence 2 37899999999999974 556667899999999999988742111 1111 3568888877
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.65 E-value=0.0004 Score=70.32 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=54.4
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEeccccc-ChhhHHHHHHHHHHHcCCC--ceeceEEEEEeCCeeEEEEEecCCCc
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHP--NVVPLRAYYYSKDEKLLVYDYFASGS 457 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~--niv~l~~~~~~~~~~~lV~e~~~~g~ 457 (672)
+.+|.|..+.||+.+..+|+.+++|+-..... ....|+.|...++.+.+.. .+++++++. ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 46899999999999999999999998654432 2456889999999885432 345555542 3478999998764
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.54 E-value=0.00046 Score=73.96 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=44.8
Q ss_pred CCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCCCCC-----CCCcccCcccccCCC---CCCccchhhHHHHHHHHH
Q 005875 498 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS-----RSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEML 569 (672)
Q Consensus 498 ~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~~~-----~~~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~el~ 569 (672)
+.++|+|+++.|||+++++ ++|+||+.+.......... -...|.+|+...... .....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999876 9999999875432110000 011255555543211 112344557777778777
Q ss_pred hC
Q 005875 570 TG 571 (672)
Q Consensus 570 tg 571 (672)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.52 E-value=0.0001 Score=65.16 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=44.6
Q ss_pred cEEeeeccCCC-CCCCCCcccccceeecccccCcccCCchhhhhccccceecCCcccc
Q 005875 158 RYLYLQHNNFS-GKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLS 214 (672)
Q Consensus 158 ~~L~l~~N~l~-g~~p~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 214 (672)
..++.+++.++ ..+|..+.++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777776 4677778788899999999998666667788888888888888764
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.45 E-value=0.00071 Score=68.92 Aligned_cols=71 Identities=6% Similarity=-0.011 Sum_probs=45.8
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec-CCCch
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF-ASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~-~~g~L 458 (672)
+.|+.|....+|+. ..+++|+.........+..+|..++..+..+.-..+++++ +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 46888999999999 5688888765322223456788888777544333556554 344567899999 55444
No 425
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.42 E-value=0.0012 Score=67.97 Aligned_cols=144 Identities=15% Similarity=0.111 Sum_probs=83.1
Q ss_pred cccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCC-ceeceEEE-----EEeCCeeEEEEEecCC
Q 005875 382 VLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY-----YYSKDEKLLVYDYFAS 455 (672)
Q Consensus 382 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~-----~~~~~~~~lV~e~~~~ 455 (672)
.++ |....||+....+|+.+++|...........+..|..++..+..+. .+++++.. ...++..++||||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 355 7778999988777778999998644445667778888888775432 24444432 2234566889999988
Q ss_pred Cchhh-----------h---hccC----CCCCCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc---
Q 005875 456 GSLST-----------L---LHGN----RGAGRTPLDWETR----VKI---------------LLGTARGVAHIHSM--- 495 (672)
Q Consensus 456 g~L~~-----------~---l~~~----~~~~~~~l~~~~~----~~i---------------~~~ia~gl~~LH~~--- 495 (672)
..+.. . +|.. ........++... ..+ ...+...++.+...
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54321 0 1110 0000111222211 001 01111223333221
Q ss_pred -CCCCcccCCCCCCCEEecCCCCeEEeecCCCCC
Q 005875 496 -GGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 528 (672)
Q Consensus 496 -~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~ 528 (672)
..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 223489999999999999 4 899999987643
No 426
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.28 E-value=0.0011 Score=69.80 Aligned_cols=142 Identities=15% Similarity=0.196 Sum_probs=84.2
Q ss_pred cccccCcEEEEEEEEC--------CCcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 382 VLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 382 ~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+..|....+|+.... +++.+++|+.-..........+|.+++..+..+.-..++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 4666777889999864 246788888644333456677899999888666555777776543 3899999
Q ss_pred CCCchhhh-----------------hccCCCCCCCCCC--HHHHHHHHHHHHH-------------------HHHHH---
Q 005875 454 ASGSLSTL-----------------LHGNRGAGRTPLD--WETRVKILLGTAR-------------------GVAHI--- 492 (672)
Q Consensus 454 ~~g~L~~~-----------------l~~~~~~~~~~l~--~~~~~~i~~~ia~-------------------gl~~L--- 492 (672)
+|..+..- +|...-....... +.+..++..++.. .+..|
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 98655311 1111111111122 3444444443321 23333
Q ss_pred -HhcC-CCCcccCCCCCCCEEecCC----CCeEEeecCCCC
Q 005875 493 -HSMG-GPKFTHGNIKASNVLINQD----LDGCISDFGLTP 527 (672)
Q Consensus 493 -H~~~-~~~ivHrDLk~~NILl~~~----~~~kl~DfGla~ 527 (672)
...+ ...++|+|+.+.||+++++ +.+.++||..+.
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2222 2348999999999999877 789999998764
No 427
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.24 E-value=0.0016 Score=70.35 Aligned_cols=74 Identities=7% Similarity=0.050 Sum_probs=49.2
Q ss_pred ccccccCcEEEEEEEECC-CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEecCCCch
Q 005875 381 EVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 458 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 458 (672)
+.|+.|-...+|+....+ +..+++|+........-+..+|..++..+..+.-..++++.+. + .+||||++|-++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 457778889999999875 4678888764432222234688899998865554567777762 2 359999987554
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.21 E-value=8.6e-05 Score=68.86 Aligned_cols=81 Identities=9% Similarity=0.063 Sum_probs=50.9
Q ss_pred CCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccC-CCCCCCCCcc------cccceeeccccc-CcccCCchhhhhcc
Q 005875 131 DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSFS------PQLVVLDLSFNS-FTGNIPQSIQNLTQ 202 (672)
Q Consensus 131 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~------~~L~~L~ls~N~-l~~~~p~~~~~l~~ 202 (672)
-.|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+. ++|++|+|+++. ||..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 368888888887764433456788888888888874 5532111111 357777777763 66433344556666
Q ss_pred ccceecCCc
Q 005875 203 LTGLSLQSN 211 (672)
Q Consensus 203 L~~L~l~~N 211 (672)
|+.|+|++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666665
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.20 E-value=0.00081 Score=72.22 Aligned_cols=73 Identities=12% Similarity=0.104 Sum_probs=50.7
Q ss_pred ccccccCcEEEEEEEECC--------CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEe
Q 005875 381 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 452 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 452 (672)
+.|+.|....||++...+ ++.+++|+.... .....+..|..++..+..+.-..++++.+.+ .+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 457778889999998753 467888887432 1125566788888888655545677776532 389999
Q ss_pred cCCCch
Q 005875 453 FASGSL 458 (672)
Q Consensus 453 ~~~g~L 458 (672)
++|-++
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 987444
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.19 E-value=0.0026 Score=65.16 Aligned_cols=145 Identities=10% Similarity=0.096 Sum_probs=80.3
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCC-ceeceEEE------EEeCCeeEEEEEec
Q 005875 381 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY------YYSKDEKLLVYDYF 453 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~------~~~~~~~~lV~e~~ 453 (672)
+.|+.|....+|+....++ .+++|..... ....++..|..++..+..+. .+.+++.. ....+..+++|+|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 3467788889999987655 6788887652 23456677888887775432 13333321 12345678999999
Q ss_pred CCCchhh--------------hhccC-CCCCC---CCC---CHHHHHH------------HHHHHHHHHHHHHhc----C
Q 005875 454 ASGSLST--------------LLHGN-RGAGR---TPL---DWETRVK------------ILLGTARGVAHIHSM----G 496 (672)
Q Consensus 454 ~~g~L~~--------------~l~~~-~~~~~---~~l---~~~~~~~------------i~~~ia~gl~~LH~~----~ 496 (672)
+|..+.. .+|.. .+-.. ... .|..... +...+...++++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 9865321 11111 00000 001 1222110 001133445555532 1
Q ss_pred CCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 497 GPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 497 ~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
.+.++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 2348999999999999987666899998753
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.15 E-value=0.0013 Score=68.02 Aligned_cols=143 Identities=15% Similarity=0.092 Sum_probs=74.0
Q ss_pred cccccCcEE-EEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCCC-ceeceEEEEEeCCeeEEEEEecCCCchh
Q 005875 382 VLGKGSYGT-AYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAYYYSKDEKLLVYDYFASGSLS 459 (672)
Q Consensus 382 ~lG~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~~~~~lV~e~~~~g~L~ 459 (672)
.|+.|+... +|+....+++.+++|...... ..++..|+.++..+..+. .+.+++.+.. +.-+++||++.+..+.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDALFT 100 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSCBHH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCcchH
Confidence 455554444 667765446677777543321 145566777777775442 3556666532 2237899999776665
Q ss_pred hhhccCC---------------------CCCCCCCCHHHHH-------H-------------HHHHHHHHHHHHH---hc
Q 005875 460 TLLHGNR---------------------GAGRTPLDWETRV-------K-------------ILLGTARGVAHIH---SM 495 (672)
Q Consensus 460 ~~l~~~~---------------------~~~~~~l~~~~~~-------~-------------i~~~ia~gl~~LH---~~ 495 (672)
+++.... ......++..... . ....+...++.+. ..
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 4442210 0001112211100 0 0001112222331 11
Q ss_pred CCCCcccCCCCCCCEEecCC----CCeEEeecCCCCC
Q 005875 496 GGPKFTHGNIKASNVLINQD----LDGCISDFGLTPL 528 (672)
Q Consensus 496 ~~~~ivHrDLk~~NILl~~~----~~~kl~DfGla~~ 528 (672)
..+.++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 23459999999999999875 6789999998754
No 432
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.03 E-value=0.0017 Score=68.22 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=45.7
Q ss_pred ccccccCcEEEEEEEECC---------CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEE
Q 005875 381 EVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 451 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 451 (672)
+.++.|....+|+....+ ++.+++|+.........+...|.+++..+..+.-+.++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 357778888999998764 267888876543221123567888888875554355676554 2 368999
Q ss_pred ecCCCch
Q 005875 452 YFASGSL 458 (672)
Q Consensus 452 ~~~~g~L 458 (672)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987544
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.87 E-value=9.2e-05 Score=70.00 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=52.3
Q ss_pred cCCCCCCcEEEccCC-CcCC----CCCCcCCCCCCCcEEeeeccCCCCCCCCCcc------cccceeecccccCccc---
Q 005875 127 LGKLDALEVLSLRSN-VLTG----GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS------PQLVVLDLSFNSFTGN--- 192 (672)
Q Consensus 127 ~~~l~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~------~~L~~L~ls~N~l~~~--- 192 (672)
+.+-+.|++|+|++| .|.. .+-+.+..=+.|+.|+|++|++...--..+. +.|+.|+|++|+|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445567888888875 6652 1233445556788888888877643333333 5678888888887743
Q ss_pred -CCchhhhhccccceecCCc
Q 005875 193 -IPQSIQNLTQLTGLSLQSN 211 (672)
Q Consensus 193 -~p~~~~~l~~L~~L~l~~N 211 (672)
+-.++..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2233444455777777654
No 434
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.63 E-value=0.0077 Score=62.33 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=44.2
Q ss_pred cccCcEEEEEEEECCCcEEEEEEecccccChhhHHHHHHHHHHHcCC--CceeceEEE------EEeCCeeEEEEEecCC
Q 005875 384 GKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAY------YYSKDEKLLVYDYFAS 455 (672)
Q Consensus 384 G~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~------~~~~~~~~lV~e~~~~ 455 (672)
|.|....||+....++ .+++|+...... ..|..++..+.++ +++++.+.. ....+..++||+|++|
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444679999987766 899998765431 3556666655332 224454432 2335677899999998
Q ss_pred Cch
Q 005875 456 GSL 458 (672)
Q Consensus 456 g~L 458 (672)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.47 E-value=0.00095 Score=61.79 Aligned_cols=80 Identities=10% Similarity=0.035 Sum_probs=56.8
Q ss_pred CCCcEEeeeccCCCCCCCCCcc--cccceeeccccc-CcccCCchhhhh----ccccceecCCcc-ccC--CCCCCCCCC
Q 005875 155 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNS-FTGNIPQSIQNL----TQLTGLSLQSNN-LSG--SIPNFDIPK 224 (672)
Q Consensus 155 ~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~--~~p~~~l~~ 224 (672)
-+|+.|||+++.++..--..+. ++|+.|+|+++. |+..-=..++.+ ++|+.|+|+++. ++. ...-..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 4799999999998743222332 789999999985 775444445553 479999999974 662 111126899
Q ss_pred CceEEeecCC
Q 005875 225 LRHLNLSYNG 234 (672)
Q Consensus 225 L~~l~l~~N~ 234 (672)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 436
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.32 E-value=0.0061 Score=64.96 Aligned_cols=73 Identities=7% Similarity=0.070 Sum_probs=49.8
Q ss_pred cccccCcEEEEEEEECC--------CcEEEEEEecccccChhhHHHHHHHHHHHcCCCceeceEEEEEeCCeeEEEEEec
Q 005875 382 VLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 453 (672)
Q Consensus 382 ~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 453 (672)
.+..|-...+|+....+ ++.+++|+........-+..+|..++..+..+.-..++++.+ . -+.||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEEe
Confidence 45567778899998763 577888886543322334578888888886555556677643 2 37899999
Q ss_pred CCCch
Q 005875 454 ASGSL 458 (672)
Q Consensus 454 ~~g~L 458 (672)
+|..|
T Consensus 153 ~G~~l 157 (424)
T 3mes_A 153 DGEPL 157 (424)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98654
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.27 E-value=0.00034 Score=66.04 Aligned_cols=109 Identities=14% Similarity=0.209 Sum_probs=72.1
Q ss_pred CCeEEEEEeCCC-Cccc----cCCccccCCCCCCcEEEccCCCcCCC----CCCcCCCCCCCcEEeeeccCCCCCCCCCc
Q 005875 105 RTRVFGLRLPGI-GLVG----PIPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSF 175 (672)
Q Consensus 105 ~~~v~~l~l~~~-~l~g----~~p~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 175 (672)
...++.|+|+++ ++.. .+-+ .+..=+.|+.|+|++|.|... +-..+..=+.|+.|+|++|.|+..--..+
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 356788888875 5432 1222 466678899999999999733 22233345789999999999984322222
Q ss_pred c------cccceeecccc---cCccc----CCchhhhhccccceecCCcccc
Q 005875 176 S------PQLVVLDLSFN---SFTGN----IPQSIQNLTQLTGLSLQSNNLS 214 (672)
Q Consensus 176 ~------~~L~~L~ls~N---~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 214 (672)
. +.|++|+|++| .|... +-..+..-+.|+.|+++.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2 57999999876 34432 3445666677888888777643
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.23 E-value=0.039 Score=52.39 Aligned_cols=102 Identities=12% Similarity=0.066 Sum_probs=66.4
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCCCCCCCCCCC
Q 005875 457 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 536 (672)
Q Consensus 457 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 536 (672)
+|.+.|... ..+++++++..++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|.+.+ ..+. .
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~ 98 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------A 98 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------c
Confidence 788888753 3469999999999999998877632111 1 1233456899999999998764 1111 1
Q ss_pred CCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCC
Q 005875 537 RSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 574 (672)
Q Consensus 537 ~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~p 574 (672)
....+.|||... ...+.+.=|||+|+++|..+.-..|
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 122367888764 3456788999999999998864444
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.23 E-value=0.0065 Score=53.34 Aligned_cols=56 Identities=27% Similarity=0.260 Sum_probs=40.2
Q ss_pred EEEeCCCCcc-ccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCC
Q 005875 110 GLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFS 168 (672)
Q Consensus 110 ~l~l~~~~l~-g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 168 (672)
.++.++++|+ ..+|.+ --.+|++|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~---lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA---FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC---CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC---CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777776 456652 2246888999999998544556778888888888888765
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.12 E-value=0.012 Score=62.10 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=64.3
Q ss_pred eEEEEEeCCCCccccCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeec
Q 005875 107 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 184 (672)
Q Consensus 107 ~v~~l~l~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 184 (672)
.+..+.++..- . .+....+.....|+.+.+..|..+ .-...|.++.+|+.+.+..+.+.. ..|. .+|+.+.+
T Consensus 231 ~l~~i~ip~~~-~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~---~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 231 GVKNIIIPDSF-T-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE---KTFYGCSSLTEVKL 304 (394)
T ss_dssp CCCEEEECTTC-C-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT---TTTTTCTTCCEEEE
T ss_pred CCceEEECCCc-e-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc---cccccccccccccc
Confidence 34555555432 2 344446777777777777766443 333445556666655555443211 1111 45555555
Q ss_pred ccccCcccCCchhhhhccccceecCCccccCCCCC--C-CCCCCceEEeecCCCCCCCCcccCCCCCCc
Q 005875 185 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 250 (672)
Q Consensus 185 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~-~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 250 (672)
.+| ++..-..+|.++++|+.++|.++ ++ .++. + ++.+|+.++|..| ++..-...|.++++|.
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 433 44333445555555555555433 33 2222 1 4555555555444 3322223444444443
No 441
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.08 E-value=0.024 Score=59.80 Aligned_cols=143 Identities=15% Similarity=0.190 Sum_probs=82.5
Q ss_pred ccccccCcEEEEEEEECC--------CcEEEEEEeccccc------------Ch-------hhHHHHHHHHHHHcCCCce
Q 005875 381 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVV------------GK-------RDFEQQMEIVGRVGQHPNV 433 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~------------~~-------~~~~~e~~~l~~l~~h~ni 433 (672)
+.|..|-...+|++...+ .+.|++++.-.... ++ +....|.+++..+..+--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346567778999988754 36788877643211 11 1122478888888667667
Q ss_pred eceEEEEEeCCeeEEEEEecCCCchhh--h---------------hccCCCCCCCCCC--HHHHHHHHHHHH--------
Q 005875 434 VPLRAYYYSKDEKLLVYDYFASGSLST--L---------------LHGNRGAGRTPLD--WETRVKILLGTA-------- 486 (672)
Q Consensus 434 v~l~~~~~~~~~~~lV~e~~~~g~L~~--~---------------l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 486 (672)
.++++++.+ .+|+||+++-+|.. + +|...-....... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 788877642 28999999755421 1 1111100111122 233333333221
Q ss_pred --------------HHH----HHHHhcC-CCCcccCCCCCCCEEecCC------CCeEEeecCCCC
Q 005875 487 --------------RGV----AHIHSMG-GPKFTHGNIKASNVLINQD------LDGCISDFGLTP 527 (672)
Q Consensus 487 --------------~gl----~~LH~~~-~~~ivHrDLk~~NILl~~~------~~~kl~DfGla~ 527 (672)
.-+ ++|...+ ...++|+|+.+.||+++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2233322 2348999999999999887 789999998764
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.08 E-value=0.0078 Score=63.65 Aligned_cols=109 Identities=16% Similarity=0.230 Sum_probs=75.8
Q ss_pred CCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhh
Q 005875 122 IPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQN 199 (672)
Q Consensus 122 ~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~ 199 (672)
+...+|.+...|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|. .+|+.++|..| ++..-..+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 44457888888888888766543 444568888888888886 445523233443 68888888765 66455678888
Q ss_pred hccccceecCCccccCCCCC---CCCCCCceEEeecCCC
Q 005875 200 LTQLTGLSLQSNNLSGSIPN---FDIPKLRHLNLSYNGL 235 (672)
Q Consensus 200 l~~L~~L~l~~N~l~~~~p~---~~l~~L~~l~l~~N~l 235 (672)
|.+|+.+.|..| ++ .+.. .++++|+.+++.+|..
T Consensus 333 C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 333 CEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 889998888655 44 3443 2788888888887754
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.80 E-value=0.019 Score=60.24 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=77.7
Q ss_pred ccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccc
Q 005875 126 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQL 203 (672)
Q Consensus 126 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L 203 (672)
.+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...|. .+|+.+.+..+ ++..-...|.+|++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 5667778888887655 44234456778888888888765 4422223333 56788877644 554455677888888
Q ss_pred cceecCCccccCCCCCC--CCCCCceEEeecCCCCCCCCcccCCCCCCccc
Q 005875 204 TGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 252 (672)
Q Consensus 204 ~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 252 (672)
+.+.+.+|.++..-... ++.+|+.+.|..| ++..-...|.++++|..+
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 88888877776322222 7788888888654 442223456666666544
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.72 E-value=0.013 Score=61.91 Aligned_cols=114 Identities=14% Similarity=0.196 Sum_probs=71.6
Q ss_pred CCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCCCcc--cccceeecccccCcccCCchhhhhccccceecC
Q 005875 132 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 209 (672)
Q Consensus 132 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 209 (672)
.+..+.+. +.+...-...|.++++|+.+.+.++..+ .-...|. ++|+.+.+. +.++..-..+|.+|.+|+.+.|.
T Consensus 243 ~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp 319 (394)
T 4gt6_A 243 EDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIP 319 (394)
T ss_dssp CCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECC
T ss_pred ccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeC
Confidence 34444443 2333233456788888888888766543 2233333 678888885 55664556678888888888887
Q ss_pred CccccCCCCC--C-CCCCCceEEeecCCCCCCCC-cccCCCCCCccc
Q 005875 210 SNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIP-SSLQKFPNSSFV 252 (672)
Q Consensus 210 ~N~l~~~~p~--~-~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 252 (672)
.| ++ .+.. + ++.+|+.+.|..+ ++ .|. ..|.++++|.-+
T Consensus 320 ~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 320 EG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNI 362 (394)
T ss_dssp TT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEE
T ss_pred Cc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEE
Confidence 65 44 3333 2 7788888888654 55 443 567777776543
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.45 E-value=0.03 Score=59.08 Aligned_cols=43 Identities=7% Similarity=0.035 Sum_probs=24.3
Q ss_pred CCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc
Q 005875 122 IPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 165 (672)
Q Consensus 122 ~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 165 (672)
|...+|.++++|+.+.|.. .++..-...|.++++|+.++|.+|
T Consensus 62 Ig~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~ 104 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS 104 (394)
T ss_dssp ECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT
T ss_pred hHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC
Confidence 4444566666666666653 355222345666666666666544
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.07 E-value=0.07 Score=55.75 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=40.1
Q ss_pred ccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeeccCCCCCCCC-Ccc--cccceeecccccCcccCCchhhhhcc
Q 005875 126 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS-SFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 202 (672)
Q Consensus 126 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~ 202 (672)
.+.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++ .++. .|. ++|+.+++.+|.++..-+.+|.+|.+
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCC
Confidence 4555555555555443 33222344555555555555433 33 2222 222 45555555555555444445555555
Q ss_pred ccceecCC
Q 005875 203 LTGLSLQS 210 (672)
Q Consensus 203 L~~L~l~~ 210 (672)
|+.+.|..
T Consensus 312 L~~i~lp~ 319 (379)
T 4h09_A 312 LSSVTLPT 319 (379)
T ss_dssp CCEEECCT
T ss_pred CCEEEcCc
Confidence 55555543
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.46 E-value=0.51 Score=49.70 Aligned_cols=29 Identities=21% Similarity=0.462 Sum_probs=24.3
Q ss_pred cccCCCCCCCEEe------cCCCCeEEeecCCCCC
Q 005875 500 FTHGNIKASNVLI------NQDLDGCISDFGLTPL 528 (672)
Q Consensus 500 ivHrDLk~~NILl------~~~~~~kl~DfGla~~ 528 (672)
++|+|+.+.|||+ +++..+.++||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999987643
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.52 E-value=0.1 Score=35.61 Aligned_cols=31 Identities=29% Similarity=0.254 Sum_probs=16.8
Q ss_pred ceeeeeeechhHHHHHHHHHhhhhhccccCC
Q 005875 295 GAIIAIAVGGSAVLLLVALVILCYCLKKKDN 325 (672)
Q Consensus 295 ~~ii~ivv~~~~~~llv~~~i~~~~~~rk~~ 325 (672)
..|++.++++++++++++++++++.+||+++
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 3455566666665555555555555555443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.34 E-value=0.085 Score=35.94 Aligned_cols=32 Identities=28% Similarity=0.389 Sum_probs=18.1
Q ss_pred ceeeeeeechhHHHHHHHHHhhhhhccccCCC
Q 005875 295 GAIIAIAVGGSAVLLLVALVILCYCLKKKDNG 326 (672)
Q Consensus 295 ~~ii~ivv~~~~~~llv~~~i~~~~~~rk~~~ 326 (672)
..|++.+++++++++++++.++++.+||++++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 44666666666665555555555555554443
No 450
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=89.15 E-value=0.065 Score=35.46 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=20.3
Q ss_pred ccccceeeeeeechhHHHHHHHHHhhhhhcc
Q 005875 291 KLGLGAIIAIAVGGSAVLLLVALVILCYCLK 321 (672)
Q Consensus 291 ~~~~~~ii~ivv~~~~~~llv~~~i~~~~~~ 321 (672)
..+.++|.+++++.++.+++++.+++++++|
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 3456778888888777666665555555544
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.15 E-value=0.22 Score=33.87 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=14.2
Q ss_pred eeeeeeechhHHHHHHHHHhhhhhccccCC
Q 005875 296 AIIAIAVGGSAVLLLVALVILCYCLKKKDN 325 (672)
Q Consensus 296 ~ii~ivv~~~~~~llv~~~i~~~~~~rk~~ 325 (672)
.|+++++| +++++++++.+++|.+||+.+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence 35555555 444444444444555555443
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=73.67 E-value=5.2 Score=37.72 Aligned_cols=116 Identities=11% Similarity=0.092 Sum_probs=76.7
Q ss_pred CCCceeceEEEEEeCCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCC
Q 005875 429 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKAS 508 (672)
Q Consensus 429 ~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~ 508 (672)
.||+.+.. .+-.+++...+.|+.-+.+-=...++ .++...+++++.+|+....+++. =+|=-|.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68988877 55566666666666544332222233 27889999999999887755554 467789999
Q ss_pred CEEecCCCCeEEeecCCCCCCCCCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 005875 509 NVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 576 (672)
Q Consensus 509 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el~tg~~pf~ 576 (672)
|++++.++.+++.=.|+-..+ +|.- .+...=.-.+=+++..+++++..|.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877653322 2211 1111112256677888899988885
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.42 E-value=7.3 Score=36.82 Aligned_cols=114 Identities=15% Similarity=0.155 Sum_probs=75.3
Q ss_pred CCCceeceEEEEEeCCeeEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCcccCCCCC
Q 005875 429 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA-HIHSMGGPKFTHGNIKA 507 (672)
Q Consensus 429 ~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~-~LH~~~~~~ivHrDLk~ 507 (672)
.||+. -..+-.+++...+.++.-+++.=...++ .++..++++++.+|+.-.. +++. -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68888 3444466677777777654543334443 2788899999998877655 4443 56778999
Q ss_pred CCEEecCCCCeEEeecCCCCCCCCCCCCCCCCcccCcccccCCCCCCccchh-hHHHHHHHHHhCCCCCC
Q 005875 508 SNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVY-SFGVLLLEMLTGKAPLQ 576 (672)
Q Consensus 508 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw-S~Gvvl~el~tg~~pf~ 576 (672)
+||+++.++.++|.-.|+-.. ++|.-+. .-|.| .+=+++..++.++..|.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~-------------lpP~e~~------ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES-------------LPPDEWD------DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT-------------BSSCSCC------HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCccc-------------CCCCCCC------HHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999987776332 2332111 11222 55667777888877774
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=60.96 E-value=0.86 Score=48.93 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=16.3
Q ss_pred ccccccCcEEEEEEEECC-CcEEEE------EEecccccC---hhhHHHHHHHHHHHcCCCceeceEEEEE
Q 005875 381 EVLGKGSYGTAYKAVLEE-STTVVV------KRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYY 441 (672)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~-~~~vav------K~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~ 441 (672)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.+|..++..+ +|+|+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEE
Confidence 4566 99999999864 367888 766543322 23566777777776 8999999887764
No 455
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=47.65 E-value=80 Score=34.61 Aligned_cols=85 Identities=13% Similarity=0.091 Sum_probs=50.0
Q ss_pred ceEEEEEeCCeeEEEEEecCCCchhhhhcc----------CCCCCCC--CCCHHHHHHHHHHHH--HHHHHHHhcCCCCc
Q 005875 435 PLRAYYYSKDEKLLVYDYFASGSLSTLLHG----------NRGAGRT--PLDWETRVKILLGTA--RGVAHIHSMGGPKF 500 (672)
Q Consensus 435 ~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~----------~~~~~~~--~l~~~~~~~i~~~ia--~gl~~LH~~~~~~i 500 (672)
+.+.+....... =+.|++++.++.+.+.. ....... ...+..+..++...| ..+.|+=.-
T Consensus 403 ~~Y~Vipls~~~-GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi----- 476 (614)
T 3ls8_A 403 TPYKVLATSTKH-GFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV----- 476 (614)
T ss_dssp CCCCEEESSSSE-EEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred eccEEEEecCCC-ceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec-----
Confidence 344444443333 34678877655555432 1111111 123455555655544 345666443
Q ss_pred ccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 501 THGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 501 vHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
+|=.++|||++.+|++.=+|||.+-
T Consensus 477 --gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 --GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4778999999999999999999863
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=35.54 E-value=19 Score=26.56 Aligned_cols=17 Identities=53% Similarity=0.716 Sum_probs=8.3
Q ss_pred eeechhHHHHHH-HHHhh
Q 005875 300 IAVGGSAVLLLV-ALVIL 316 (672)
Q Consensus 300 ivv~~~~~~llv-~~~i~ 316 (672)
+++|+++.++++ .+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 456665554443 34444
No 457
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=30.70 E-value=4.4 Score=25.97 Aligned_cols=14 Identities=14% Similarity=0.328 Sum_probs=5.4
Q ss_pred HHHHHHhhhhhccc
Q 005875 309 LLVALVILCYCLKK 322 (672)
Q Consensus 309 llv~~~i~~~~~~r 322 (672)
+++.+.+..+.+||
T Consensus 21 vii~l~~~~~iRRr 34 (35)
T 1iij_A 21 LILVVVVGILIKRR 34 (35)
T ss_dssp HHHTTTTTHHHHHC
T ss_pred HHHHHHhheEEeec
Confidence 33333333444443
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.37 E-value=73 Score=25.65 Aligned_cols=44 Identities=9% Similarity=0.112 Sum_probs=32.3
Q ss_pred cCCccccCCCCCCcEEEccCCCcCCCCCCcCCCCCCCcEEeeecc
Q 005875 121 PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 165 (672)
Q Consensus 121 ~~p~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 165 (672)
.|....|.+.++|+.+.|-.+ ++..-...|.++++|+.+.+...
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 455668888888888888765 44344567888888888888654
No 459
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=30.12 E-value=1.2e+02 Score=33.69 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=32.2
Q ss_pred HHHHHHHHHHH--HHHHHHHhcCCCCcccCCCCCCCEEecCCCCeEEeecCCCC
Q 005875 476 ETRVKILLGTA--RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 527 (672)
Q Consensus 476 ~~~~~i~~~ia--~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 527 (672)
..+..++..+| ..+.|+=.- +|=.++||||+.+|.+.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34445555544 345555433 5889999999999999999999863
No 460
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=25.58 E-value=11 Score=23.88 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=13.5
Q ss_pred cceeeeeeechhHHHHHHHHHhhh
Q 005875 294 LGAIIAIAVGGSAVLLLVALVILC 317 (672)
Q Consensus 294 ~~~ii~ivv~~~~~~llv~~~i~~ 317 (672)
.+.+.+++++.++..+++++.+++
T Consensus 6 ~gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEeEeHHHHHHHHHHHHHHhh
Confidence 455666666665555555444444
No 461
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=23.40 E-value=25 Score=23.46 Aligned_cols=24 Identities=29% Similarity=0.648 Sum_probs=13.4
Q ss_pred ccceeeeeeechhHHHHHHHHHhh
Q 005875 293 GLGAIIAIAVGGSAVLLLVALVIL 316 (672)
Q Consensus 293 ~~~~ii~ivv~~~~~~llv~~~i~ 316 (672)
+.+++++..+++++++.++++.++
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~ 38 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLV 38 (43)
Confidence 345667776666665544444433
Done!