Citrus Sinensis ID: 005879
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 672 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LV11 | 956 | ATPase 11, plasma membran | yes | no | 0.985 | 0.692 | 0.945 | 0.0 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.985 | 0.692 | 0.938 | 0.0 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.985 | 0.692 | 0.936 | 0.0 | |
| Q9SU58 | 960 | ATPase 4, plasma membrane | no | no | 0.982 | 0.687 | 0.939 | 0.0 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.982 | 0.689 | 0.934 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.974 | 0.688 | 0.871 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.974 | 0.688 | 0.858 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.973 | 0.686 | 0.859 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.973 | 0.689 | 0.859 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.973 | 0.689 | 0.837 | 0.0 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1243 bits (3216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/662 (94%), Positives = 651/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDKEEVLEAVLKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+NKLEEKKES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTN VGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++EVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHN+++IERRVHAVIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/662 (93%), Positives = 645/662 (97%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
M +K EVL+AVLKETVDLENIPIEEVFENLRC+REGL++ AA+ERLSIFGYNKLEEKKES
Sbjct: 1 MAEKPEVLDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDG+W+E+DAS+LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWDEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ R+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIEVF KG+DAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAA+ASR ENQDAID AIVGMLADPKEARAGI+E+HFLPFNPTDKRTALTY+D G
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVH VIDKFAERGLRSL VAYQEVPEGRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+ L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1231 bits (3186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/662 (93%), Positives = 648/662 (97%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MG+K EVL+AVLKETVDLENIPIEEVFENLRC++EGL++ AA+ERLSIFGYNKLEEKKES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KF KFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFSKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDG+W E+DA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ R+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIEVF +GVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAA+ASRTENQDAIDAAIVGMLADPKEARAGI+E+HFLPFNPTDKRTALTY+D G
Sbjct: 361 TVVLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQIL+LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+ L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI+ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1231 bits (3184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/660 (93%), Positives = 644/660 (97%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKF 62
D EVLEAVLKE VDLEN+PIEEVFENLRCS+EGL++QAA+ERL++FG+NKLEEKKESKF
Sbjct: 7 DNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKF 66
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 122
LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG
Sbjct: 67 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 126
Query: 123 NAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
NAAAALMARLAPK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKIDQ
Sbjct: 127 NAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 186
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQK 242
SALTGESLPVTK GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ+GHFQ+
Sbjct: 187 SALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQ 246
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIAVGM++EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 247 VLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 306
Query: 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTV 362
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDADTV
Sbjct: 307 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTV 366
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
VLMAA+ASR ENQDAIDAAIVGMLADPK+ARAGIQEVHFLPFNPTDKRTALTYIDN G
Sbjct: 367 VLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNT 426
Query: 423 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ 482
HRVSKGAPEQILNLAHNKS+IERRVHAVIDKFAERGLRSLAVAYQ+VPEGRKDS GGPWQ
Sbjct: 427 HRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQ 486
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
F+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALL
Sbjct: 487 FVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 546
Query: 543 GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK
Sbjct: 547 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 606
Query: 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 607 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 666
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1226 bits (3172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/660 (93%), Positives = 644/660 (97%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKF 62
+K EVL+AVLKE VDLENIPIEEVFENLRC++EGL++ AA+ERL+IFGYNKLEEKK+SK
Sbjct: 4 EKPEVLDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSKL 63
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 122
LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENNAG
Sbjct: 64 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAG 123
Query: 123 NAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
NAAAALMARLAPK KVLRDGRW E+DA++LVPGDIISIKLGDIIPADARLLEGDPLKIDQ
Sbjct: 124 NAAAALMARLAPKAKVLRDGRWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 183
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQK 242
SALTGESLPVTKGPGDGVYSGSTCKQGEIEA+VIATGVHTFFGKAAHLVD+TNQVGHFQK
Sbjct: 184 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQK 243
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIAVGMI+EIIVMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 244 VLTAIGNFCICSIAVGMIIEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 303
Query: 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTV 362
IGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDAD V
Sbjct: 304 IGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADMV 363
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
VLMAA+ASRTENQDAIDAAIVGMLADPKEARAGI+E+HFLPFNPTDKRTALTY+D GKM
Sbjct: 364 VLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKM 423
Query: 423 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ 482
HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSL VAYQEVPEGRK+S GGPWQ
Sbjct: 424 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQ 483
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
F+GL+PLFDPPRHDSAETIRRALNLGVNVKM+TGDQLAIGKETGRRLGMGTNMYPSSALL
Sbjct: 484 FIGLLPLFDPPRHDSAETIRRALNLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSALL 543
Query: 543 GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ KDESI+ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK
Sbjct: 544 GQTKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 603
Query: 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
ADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 604 ADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 663
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/655 (87%), Positives = 611/655 (93%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + E VDLENIPIEEVFE L+C+REGLSS+ R+ +FG NKLEEKKESK LKFLG
Sbjct: 4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDW+DFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDGRW EQ+A+ILVPGDIISIKLGDI+PADARLLEGDPLKIDQSALTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQ VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVG+++EIIVM+PIQ R YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVFTKGVD D V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASRTENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID G HR SK
Sbjct: 364 RASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL L + K D++R+VHAVIDK+AERGLRSLAVA QEVPE K+S GGPWQF+GL+
Sbjct: 424 GAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ ALP+DELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
AVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIV+
Sbjct: 604 AVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVL 658
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/655 (85%), Positives = 607/655 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + E VDLENIPIEEVFE L+C+R+GL+S +R+ IFG NKLEEKKESK LKFLG
Sbjct: 4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDGRW EQ+ASILVPGDI+SIKLGDI+PADARLLEGDPLKIDQS LTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQ+VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCI SIAVG+++EIIVM+PIQ R+YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGVD + V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDA +VGMLADPKEARAGI+EVHFLPFNPTDKRTALTYID G HR SK
Sbjct: 364 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQI+ L + K D++R+VH+VI+K+AERGLRSLAVA QEVPE KDSPGGPWQF+GL+
Sbjct: 424 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ +LP+DELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
AV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIV+
Sbjct: 604 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVL 658
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/654 (85%), Positives = 606/654 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + ETVDLE IPIEEVFE L+C+REGLS+ RL IFG NKLEEK ESK LKFLG
Sbjct: 7 LEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKILKFLG 66
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAIALANG GKPPDWQDF+GII LLVINSTISFIEENNAGNAAAA
Sbjct: 67 FMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGNAAAA 126
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDGRW+EQ+A+ILVPGDIIS+KLGDIIPADARLLEGDPLKIDQSALTG
Sbjct: 127 LMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 186
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHFQKVLTAI
Sbjct: 187 ESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAI 246
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GM+VEIIVMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 247 GNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 306
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVD + V+L+AA
Sbjct: 307 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVLLLAA 366
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDA +VGMLADPKEARAGI+EVHFLPFNP DKRTALTYIDN HR SK
Sbjct: 367 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWHRASK 426
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL+L + K D+ R+VH+++DK+AERGLRSLAVA + VPE K+SPGG W+F+GL+
Sbjct: 427 GAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEFVGLL 486
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLGQDKD
Sbjct: 487 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 546
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
+IA+LPI+ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADIGI
Sbjct: 547 SAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 606
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 607 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 660
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/654 (85%), Positives = 607/654 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + ETVDLE IPIEEVF+ L+CSREGL++Q E+R+ IFG NKLEEKKESK LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANG G+PPDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDG+W+EQ+A+ILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLTAI
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GM++EIIVMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
ASR ENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID +G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL LA +D+ ++V ++IDK+AERGLRSLAVA Q VPE K+SPG PW+F+GL+
Sbjct: 424 GAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
++A++P++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/654 (83%), Positives = 596/654 (91%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
L+ + E+VDL IP+EEVFE L+C+++GL++ A RL +FG NKLEEKKESK LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AA+MAIALANGGG+PPDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRD +W+EQ+ASILVPGD+ISIKLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ES+PVTK P D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLVD TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+IVE++VMYPIQ R YR GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVDKNL+EVF KGV + V L+AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDAAIVGMLADPKEARAG++EVHF PFNP DKRTALTY+D+ G HR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQILNL + K D+ R+VH VIDKFAERGLRSLAVA QEV E +KD+PGGPWQ +GL+
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ ALP+DELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
AV DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 672 | ||||||
| 297793855 | 956 | AHA11-ATPASE 11 [Arabidopsis lyrata subs | 0.985 | 0.692 | 0.944 | 0.0 | |
| 356516752 | 966 | PREDICTED: ATPase 11, plasma membrane-ty | 0.985 | 0.685 | 0.957 | 0.0 | |
| 356508602 | 966 | PREDICTED: ATPase 11, plasma membrane-ty | 0.985 | 0.685 | 0.959 | 0.0 | |
| 356508600 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.985 | 0.692 | 0.959 | 0.0 | |
| 356516750 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.985 | 0.692 | 0.957 | 0.0 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.985 | 0.692 | 0.953 | 0.0 | |
| 224135653 | 967 | autoinhibited H+ ATPase [Populus trichoc | 0.985 | 0.684 | 0.945 | 0.0 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 0.985 | 0.685 | 0.941 | 0.0 | |
| 15241907 | 956 | H(+)-ATPase 11 [Arabidopsis thaliana] gi | 0.985 | 0.692 | 0.945 | 0.0 | |
| 312282347 | 956 | unnamed protein product [Thellungiella h | 0.985 | 0.692 | 0.944 | 0.0 |
| >gi|297793855|ref|XP_002864812.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] gi|297310647|gb|EFH41071.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/662 (94%), Positives = 651/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDKEEVLEA+LKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+NKLEEKKES
Sbjct: 1 MGDKEEVLEAILKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAI LANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW EQDA+ILVPGDI+SIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIVSIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++EVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNK++IERRVHAVIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516752|ref|XP_003527057.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/662 (95%), Positives = 652/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+SPGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESPGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508602|ref|XP_003523044.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/662 (95%), Positives = 652/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESTGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508600|ref|XP_003523043.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1256 bits (3249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/662 (95%), Positives = 652/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESTGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516750|ref|XP_003527056.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1256 bits (3249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/662 (95%), Positives = 652/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+SPGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESPGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1247 bits (3227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/662 (95%), Positives = 652/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
M DK EVLEAVLKETVDLENIPIEEVFENLRCSREGL+S+AA+ERL+IFGYN+LEEKKES
Sbjct: 1 MADKPEVLEAVLKETVDLENIPIEEVFENLRCSREGLTSEAAQERLAIFGYNRLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW+E+DA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDG+YSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQDR+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVD D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAA+ASR ENQDAID AIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLA NKS+IERRVHAVIDKFAERGLRSLAVAYQEVP+GRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLARNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135653|ref|XP_002322127.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222869123|gb|EEF06254.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/673 (94%), Positives = 651/673 (96%), Gaps = 11/673 (1%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MG+K EVLEAVLKETVDLENIPIEEVFENLRCSREGL+SQAAEERLSIFG+NKLEEKKE
Sbjct: 1 MGEKAEVLEAVLKETVDLENIPIEEVFENLRCSREGLTSQAAEERLSIFGHNKLEEKKER 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW+EQDA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QK----------VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIP 290
QK VLTAIGNFCICSIA+GMI+E+IVMYPIQDR+YRPGIDNLLVLLIGGIP
Sbjct: 241 QKARRYNCYMFFVLTAIGNFCICSIAIGMIIELIVMYPIQDRQYRPGIDNLLVLLIGGIP 300
Query: 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 350
IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI
Sbjct: 301 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 360
Query: 351 EV-FTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDK 409
EV F KGVDADTVVLMAAQASR ENQDAID AIVGMLADPKEARAGIQEVHFLPFNPTDK
Sbjct: 361 EVVFAKGVDADTVVLMAAQASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDK 420
Query: 410 RTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEV 469
RTALTYID+ G MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQ+V
Sbjct: 421 RTALTYIDSGGIMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQKV 480
Query: 470 PEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529
PEGRK+S GGPWQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL
Sbjct: 481 PEGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 540
Query: 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589
GMGTNMYPSSALLGQDKDESI ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM
Sbjct: 541 GMGTNMYPSSALLGQDKDESIVALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 600
Query: 590 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY
Sbjct: 601 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 660
Query: 650 TIYAVSITIRIVV 662
TIYAVSITIRIV+
Sbjct: 661 TIYAVSITIRIVL 673
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/672 (94%), Positives = 652/672 (97%), Gaps = 10/672 (1%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK EVLEAVLKETVDLENIPIEEV ENLRCSREGL++QAAEERL+IFG+NKLEEKKE
Sbjct: 1 MGDKGEVLEAVLKETVDLENIPIEEVLENLRCSREGLTTQAAEERLAIFGHNKLEEKKER 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QK----------VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIP 290
QK VLTAIGNFCICSIA+GM++E+IVMYPIQDR+YRPGIDNLLVLLIGGIP
Sbjct: 241 QKARRYNCYMIFVLTAIGNFCICSIAIGMVIELIVMYPIQDRKYRPGIDNLLVLLIGGIP 300
Query: 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 350
IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI
Sbjct: 301 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 360
Query: 351 EVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKR 410
EVF KGVDAD VVLMAA+ASR ENQDAID AIVGMLADPKEARAGIQEVHFLPFNPTDKR
Sbjct: 361 EVFAKGVDADAVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKR 420
Query: 411 TALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP 470
TALTYID+ GKMHRVSKGAPEQILNL+HNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP
Sbjct: 421 TALTYIDSGGKMHRVSKGAPEQILNLSHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP 480
Query: 471 EGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530
EGRK+S GGPWQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG
Sbjct: 481 EGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 540
Query: 531 MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 590
MGTNMYPSSALLGQ+KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT
Sbjct: 541 MGTNMYPSSALLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 600
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650
GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 601 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 660
Query: 651 IYAVSITIRIVV 662
IYAVSITIRIV+
Sbjct: 661 IYAVSITIRIVL 672
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15241907|ref|NP_201073.1| H(+)-ATPase 11 [Arabidopsis thaliana] gi|12230459|sp|Q9LV11.1|PMA11_ARATH RecName: Full=ATPase 11, plasma membrane-type; AltName: Full=Proton pump 11 gi|8809663|dbj|BAA97214.1| plasma membrane proton ATPase-like [Arabidopsis thaliana] gi|21928115|gb|AAM78085.1| AT5g62670/MRG21_9 [Arabidopsis thaliana] gi|38564278|gb|AAR23718.1| At5g62670/MRG21_9 [Arabidopsis thaliana] gi|332010258|gb|AED97641.1| H(+)-ATPase 11 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1243 bits (3216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/662 (94%), Positives = 651/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDKEEVLEAVLKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+NKLEEKKES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTN VGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++EVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHN+++IERRVHAVIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312282347|dbj|BAJ34039.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 1243 bits (3215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/662 (94%), Positives = 652/662 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDKEEVLEAVLKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+NKLEEKKES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGM++EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++E+HFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREIHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKS+IERRVH VIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSEIERRVHTVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFVGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 672 | ||||||
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.985 | 0.692 | 0.853 | 8.7e-301 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.982 | 0.687 | 0.846 | 2.7e-297 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.973 | 0.689 | 0.767 | 3.4e-267 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.973 | 0.689 | 0.759 | 1.1e-266 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.973 | 0.689 | 0.753 | 1.7e-263 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.973 | 0.689 | 0.752 | 9.6e-263 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.983 | 0.692 | 0.744 | 1.2e-262 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.971 | 0.688 | 0.744 | 8.9e-260 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.973 | 0.680 | 0.724 | 1.3e-256 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.971 | 0.689 | 0.703 | 1.2e-241 |
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2887 (1021.3 bits), Expect = 8.7e-301, P = 8.7e-301
Identities = 565/662 (85%), Positives = 590/662 (89%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXX 60
MGDKEEVLEAVLKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+N
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 XXXXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXX 120
MWNPLSWVME NGGGKPPDWQDFVGIITLLVINSTISFIEE
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 XXXXXXXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
PK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTN VGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++EVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHN+++IERRVHAVIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KK VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VV 662
V+
Sbjct: 661 VL 662
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2854 (1009.7 bits), Expect = 2.7e-297, P = 2.7e-297
Identities = 559/660 (84%), Positives = 583/660 (88%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXX 62
D EVLEAVLKE VDLEN+PIEEVFENLRCS+EGL++QAA+ERL++FG+N
Sbjct: 7 DNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKF 66
Query: 63 XXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXX 122
MWNPLSWVME NGGGKPPDWQDFVGIITLLVINSTISFIEE
Sbjct: 67 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 126
Query: 123 XXXXXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
PK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKIDQ
Sbjct: 127 NAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 186
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQK 242
SALTGESLPVTK GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ+GHFQ+
Sbjct: 187 SALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQ 246
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIAVGM++EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 247 VLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 306
Query: 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTV 362
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDADTV
Sbjct: 307 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTV 366
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
VLMAA+ASR ENQDAIDAAIVGMLADPK+ARAGIQEVHFLPFNPTDKRTALTYIDN G
Sbjct: 367 VLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNT 426
Query: 423 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ 482
HRVSKGAPEQILNLAHNKS+IERRVHAVIDKFAERGLRSLAVAYQ+VPEGRKDS GGPWQ
Sbjct: 427 HRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQ 486
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
F+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALL
Sbjct: 487 FVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 546
Query: 543 GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK
Sbjct: 547 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 606
Query: 603 XXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 607 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 666
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2570 (909.7 bits), Expect = 3.4e-267, P = 3.4e-267
Identities = 502/654 (76%), Positives = 551/654 (84%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXX 67
LE + ETVDLE IPIEEVF+ L+C+REGL++Q E+R+ IFG N
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 68 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXX 127
MWNPLSWVME NG +PPDWQDFVGII LLVINSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
PK KVLRDG+W+EQ+A+ILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+ +EI+VMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
ASR ENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID+ G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL+LA+ + D+ ++V + IDK+AERGLRSLAVA Q VPE K+SPGGPW+F+GL+
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS+ALLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
+IA++P++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2565 (908.0 bits), Expect = 1.1e-266, P = 1.1e-266
Identities = 497/654 (75%), Positives = 550/654 (84%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXX 67
LE ++ E VDLE IPIEEVF+ L+CSREGLS E RL IFG N
Sbjct: 5 LEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLG 64
Query: 68 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXX 127
MWNPLSWVME NGGGKPPDWQDFVGI+ LLVINSTISF+EE
Sbjct: 65 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAA 124
Query: 128 XXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
PK KVLRDG+W+EQ+ASILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 125 LMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 184
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLP TKGPG+ V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLTAI
Sbjct: 185 ESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 244
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVG+ +EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 245 GNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHK 304
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEV+ KGV+ D V+L AA
Sbjct: 305 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAA 364
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDAA+VGMLADPKEARAGI+E+HFLPFNP DKRTALT+ID+ G HRVSK
Sbjct: 365 RASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSK 424
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL+L + ++D+ +RVH+ IDK+AERGLRSLAV+ Q VPE K+S G PW+F+G++
Sbjct: 425 GAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVL 484
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSS+LLG+ KD
Sbjct: 485 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKD 544
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
E++A +P+++LIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 545 EAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 604
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 605 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 658
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2535 (897.4 bits), Expect = 1.7e-263, P = 1.7e-263
Identities = 493/654 (75%), Positives = 540/654 (82%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXX 67
L+ + E+VDL IP+EEVFE L+C+++GL++ A RL +FG N
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXX 127
MWNPLSWVME NGGG+PPDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
PK KVLRD +W+EQ+ASILVPGD+ISIKLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ES+PVTK P D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLVD TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+IVE++VMYPIQ R YR GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVDKNL+EVF KGV + V L+AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDAAIVGMLADPKEARAG++EVHF PFNP DKRTALTY+D+ G HR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQILNL + K D+ R+VH VIDKFAERGLRSLAVA QEV E +KD+PGGPWQ +GL+
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
S+ ALP+DELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2528 (895.0 bits), Expect = 9.6e-263, P = 9.6e-263
Identities = 492/654 (75%), Positives = 538/654 (82%)
Query: 9 EAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXXX 68
+ + KE VDLE IP+EEVFE L+CS+EGLSS +RL IFG N
Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGGK PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK KVLRDG+W EQ+ASILVPGD+ISIKLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248
SLP TK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TN VGHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EI++MYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQ 368
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K +D+D+VVLMAA+
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 369 ASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKG 428
ASR ENQDAIDA+IVGML DPKEARAGI EVHFLPFNP DKRTA+TYID +G HR SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 429 APEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMP 488
APEQI+ L + + + +R+ H VID FAERGLRSL VA Q VPE K+S G PW+F+GL+P
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 548
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS++LLG KDE
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
S+ +PIDELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 661
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2527 (894.6 bits), Expect = 1.2e-262, P = 1.2e-262
Identities = 492/661 (74%), Positives = 539/661 (81%)
Query: 2 GDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXX 61
G+K+ + + E +DLE IPIEEV LRC+REGL+S + RL IFG N
Sbjct: 3 GNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENK 62
Query: 62 XXXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXX 121
MWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 63 VLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNA 122
Query: 122 XXXXXXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181
PK KVLRDG+W+EQ+A+ILVPGDIISIKLGDI+PAD RLL+GDPLKID
Sbjct: 123 GNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKID 182
Query: 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQ 241
QSALTGESLPVTK PG VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TNQ GHFQ
Sbjct: 183 QSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIA+GM++EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADT 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK+++EVF K +D D
Sbjct: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQ 362
Query: 362 VVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGK 421
+++ AA+ASR ENQDAIDA IVGML DP+EAR GI EVHF PFNP DKRTA+TYID G
Sbjct: 363 LLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGN 422
Query: 422 MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPW 481
HRVSKGAPEQI+ L + + D +R H +IDKFA+RGLRSLAV Q V E K+SPG PW
Sbjct: 423 WHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPW 482
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
QF+GL+PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL
Sbjct: 483 QFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
LGQDKDESIA+LP+DELIEKADGFAGVFPEHKYEIVKRLQ KHICGMTGDGVNDAPALK
Sbjct: 543 LGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALK 602
Query: 602 KXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
+ VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 662
Query: 662 V 662
+
Sbjct: 663 M 663
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2500 (885.1 bits), Expect = 8.9e-260, P = 8.9e-260
Identities = 487/654 (74%), Positives = 536/654 (81%)
Query: 9 EAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXXX 68
+ + KE VDLE IP++EVF+ L+CSREGLSS+ RL IFG N
Sbjct: 8 DEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK KVLRDGRW EQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248
SLP TK GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TN VGHFQKVLTAIG
Sbjct: 188 SLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EII+MYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQ 368
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF+K VD D V+L++A+
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSAR 367
Query: 369 ASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKG 428
ASR ENQDAID +IV ML DPKEARAGI EVHFLPFNP +KRTA+TYID G+ HR SKG
Sbjct: 368 ASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKG 427
Query: 429 APEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMP 488
APEQI+ L K + +RR H +IDKFAERGLRSL VA Q VPE K+S G PW+F+GL+P
Sbjct: 428 APEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 548
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LL ++KD+
Sbjct: 488 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDD 546
Query: 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
+ +P+DELIEKADGFAGVFPEHKYEIV++LQ RKHI GMTGDGVNDAPALKK
Sbjct: 547 TTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIA 606
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 607 VDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2470 (874.5 bits), Expect = 1.3e-256, P = 1.3e-256
Identities = 476/657 (72%), Positives = 540/657 (82%)
Query: 6 EVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXX 65
E L+A+ E++DLEN+P+EEVF++L+C++EGL+S +ERL++FGYN
Sbjct: 5 EALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKF 64
Query: 66 XXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXX 125
MWNPLSWVME +GGGKP D+ DFVGI+ LL+INSTISF+EE
Sbjct: 65 LGFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAA 124
Query: 126 XXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSAL 185
PK K +RDG+WNE DA+ LVPGDI+SIKLGDIIPADARLLEGDPLKIDQ+ L
Sbjct: 125 AALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATL 184
Query: 186 TGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLT 245
TGESLPVTK PG VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+T VGHFQKVLT
Sbjct: 185 TGESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLT 244
Query: 246 AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSIAVGM +EI+V+Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+
Sbjct: 245 AIGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGA 304
Query: 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLM 365
HRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVF +G+D D VLM
Sbjct: 305 HRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLM 364
Query: 366 AAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRV 425
AA+A+R ENQDAID AIV ML+DPKEARAGI+E+HFLPF+P ++RTALTY+D GKMHRV
Sbjct: 365 AARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRV 424
Query: 426 SKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMG 485
SKGAPE+IL++AHNK +I+ +VHA IDKFAERGLRSL +AYQEVP+G GGPW F+
Sbjct: 425 SKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVA 484
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD 545
L+PLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPSS+LL +
Sbjct: 485 LLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDN 544
Query: 546 KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXX 605
E ++ +DELIE ADGFAGVFPEHKYEIVKRLQ+RKHICGMTGDGVNDAPALKK
Sbjct: 545 NTEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADI 601
Query: 606 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 602 GIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVM 658
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2329 (824.9 bits), Expect = 1.2e-241, P = 1.2e-241
Identities = 460/654 (70%), Positives = 520/654 (79%)
Query: 13 KETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXXXMWNP 72
++ +DL +P+EEVFE LR S +GL S AEERL IFG N MWNP
Sbjct: 17 RKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGFMWNP 76
Query: 73 LSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXXXXXXX 132
LSWVME N PDW+DF GI+ LL+IN+TISF EE
Sbjct: 77 LSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAALMARL 136
Query: 133 XPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPV 192
K +VLRDG+W EQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQS LTGESLPV
Sbjct: 137 ALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGESLPV 196
Query: 193 TKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCI 252
TK G+ V+SGSTCKQGEIEAVVIATG TFFGK A LVD+T+ GHFQ+VLT+IGNFCI
Sbjct: 197 TKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIGNFCI 256
Query: 253 CSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312
CSIAVGM++EII+M+P+Q R YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRLSQQG
Sbjct: 257 CSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQG 316
Query: 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT 372
AITKRMTAIEEMAGMDVLC DKTGTLTLN LTVDKNLIEVF +D DT++L+A +ASR
Sbjct: 317 AITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRL 376
Query: 373 ENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQ 432
ENQDAIDAAIV MLADP+EARA I+E+HFLPFNP DKRTA+TYID+ GK +R +KGAPEQ
Sbjct: 377 ENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQ 436
Query: 433 ILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492
+LNL K++I +RV+A+ID+FAE+GLRSLAVAYQE+PE +SPGGPW+F GL+PLFDP
Sbjct: 437 VLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDP 496
Query: 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAA 552
PRHDS ETI RAL+LGV VKMITGDQLAI KETGRRLGMGTNMYPSS+LLG + DE A
Sbjct: 497 PRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EA 555
Query: 553 LPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXX 612
+P+DELIE ADGFAGVFPEHKYEIVK LQ KH+ GMTGDGVNDAPALKK
Sbjct: 556 IPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADA 615
Query: 613 XXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIV+ +L
Sbjct: 616 TDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTL 669
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.9456 | 0.9851 | 0.6924 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8593 | 0.9732 | 0.6869 | N/A | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.9348 | 0.9821 | 0.6896 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.9365 | 0.9851 | 0.6924 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8580 | 0.9747 | 0.6887 | N/A | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.9380 | 0.9851 | 0.6924 | N/A | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.9393 | 0.9821 | 0.6875 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.9439 | 0.6101 | 0.5823 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| scaffold_802942.1 | annotation not avaliable (956 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 672 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-169 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-117 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 9e-89 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 5e-87 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-84 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 8e-76 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-68 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-63 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-58 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-57 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-57 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-41 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 7e-40 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 9e-38 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-36 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-33 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 9e-31 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-29 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-29 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-29 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 9e-29 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-28 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 6e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-20 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 5e-18 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 6e-14 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-07 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 6e-07 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-04 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 6e-04 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.001 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 992 bits (2567), Expect = 0.0
Identities = 377/629 (59%), Positives = 465/629 (73%), Gaps = 20/629 (3%)
Query: 36 GLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95
GL+S A++RL+ +G N+L EKK S LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPG 155
W DFV I+ LL++N+TI FIEEN AGNA AL LAPK +VLRDG+W E AS LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVV 215
D++ +K+GDI+PAD RL EGD +++DQ+ALTGESLPVTK GD YSGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 216 IATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREY 274
ATG++TFFGKAA LV +T GH QK+L+ IG F I I V +++E++V++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334
R G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA 394
TGTLTLNKL++D+ L F G D D V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 395 GIQEVHFLPFNPTDKRTALTYIDNA-GKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDK 453
G + + F+PF+P DKRT T D GK +V+KGAP+ IL+L NK +IE +V +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513
A RG R+L VA G W F+GL+PLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 514 ITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573
+TGD LAI KET RRLG+GTN+Y + LL D + + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDADGFAEVFPEHK 522
Query: 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633
YEIV+ LQ R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
A+L SR IFQRMK+Y IY ++ TIRIV
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVF 611
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This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 508 bits (1310), Expect = e-169
Identities = 234/712 (32%), Positives = 355/712 (49%), Gaps = 70/712 (9%)
Query: 11 VLKETVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGF 68
V ET ++ E+ L S GLS + + RL +G N+L EEKK S KFL
Sbjct: 18 VTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQ 77
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAAL 128
+P ++ AA+++ + G D + I+ ++VIN+ + F++E A A AL
Sbjct: 78 FKDPFIILLLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL 134
Query: 129 MARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
+PK KVLRDG++ E AS LVPGDI+ ++ GD++PAD RLLE L++D+SALTGE
Sbjct: 135 KKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGE 194
Query: 189 SLPVTKGPGDG--------------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234
SLPV K ++SG+T G + +V+ATG T FGK A L+ T
Sbjct: 195 SLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254
Query: 235 NQV-GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNL----LVLLIGGI 289
+V Q+ L +G F + V +V +++ + G+ L L + +
Sbjct: 255 KEVKTPLQRKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAV 310
Query: 290 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNL 349
P +P V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK+TV K
Sbjct: 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIY 370
Query: 350 I-----EVFTKGVDADTVVLMAAQASRTEN------------QDAIDAAIV------GML 386
I ++ K + +L A+ N D + A+V G
Sbjct: 371 INGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFS 430
Query: 387 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN-------LAHN 439
D + +PF+ KR ++ + GK KGAPE IL L
Sbjct: 431 LDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPL 490
Query: 440 KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ----FMGLMPLFDPPRH 495
+ R + + + A GLR LAVAY+++ KD + F+GL + DPPR
Sbjct: 491 TEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPRE 550
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALP- 554
D E I G+ V MITGD + + G+ + + G + + AL
Sbjct: 551 DVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALSD 606
Query: 555 --IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD- 611
+ EL+E+ FA V PE K IV+ LQ H+ MTGDGVNDAPALK AD+GIA+
Sbjct: 607 EELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVS 663
TDAA+ A+DIVL + + I+ AV+ R ++ +K + +Y +S + V++
Sbjct: 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLT 718
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 361 bits (929), Expect = e-117
Identities = 179/584 (30%), Positives = 278/584 (47%), Gaps = 78/584 (13%)
Query: 103 IITLLVINSTISFIEENNAGNAAAALMARLAPKGK--VLRDGRWNEQDASILVPGDIISI 160
I+ L+++ + ++ A + +L RL VLR+G W E A LVPGD++ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDGVYSGSTCKQGE 210
K G+ +PAD LL G +D+S LTGES PV K GD V++G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 211 IEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI 269
+ VV TG+ T G+ A +V T Q + NF I + + ++ + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 270 ----QDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGM 385
+D LCSDKTGTLT NK+T+ + + D + ++ + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLKS 294
Query: 386 LADPKEARAGIQE---VHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSD 442
+A G +E + PF+ KR ++ G KGAPE IL +N
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN--- 351
Query: 443 IERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIR 502
+ A +GLR LA A +E+ +F+GL+ DP R D+ ETI
Sbjct: 352 ----YEEKYLELARQGLRVLAFASKELE--------DDLEFLGLITFEDPLRPDAKETIE 399
Query: 503 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 563 DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622
D FA V PE K +IV+ LQ + HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666
VL + LS I+ AV R IF +K+ +A++ + ++ L
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALL 527
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 295 bits (757), Expect = 9e-89
Identities = 204/725 (28%), Positives = 349/725 (48%), Gaps = 98/725 (13%)
Query: 21 IPIEEVFENLRCSRE-GL-SSQAAEERLSIFGYNKLE-EKKESKFLKFLG-FMWNPLSWV 76
+ +EE L+ + GL SSQ A R + G+N+ + E+ ES + KFL F+ NPL +
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILL 66
Query: 77 MEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKG 136
+ A+A++++ + N D V I ++I T+ F++E + + AL + P+
Sbjct: 67 LIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119
Query: 137 KVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG- 195
++R+G+ AS LVPGD++ + +GD +PAD R++E L ID+S LTGE+ PV+K
Sbjct: 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVT 179
Query: 196 -------PGD------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGH-FQ 241
GD + G+ + G + +V+ TG +T FG ++ + Q
Sbjct: 180 APIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
K + +G + ++ G+I I ++ Q +++ + L + IP +P +++VT+
Sbjct: 240 KSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTL 298
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK--------NLIEVF 353
A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV K ++
Sbjct: 299 ALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAV 358
Query: 354 T-----------------KGVDADTVVLMAA---QASRTENQDAI-----DAAIVGMLA- 387
+ V ++ A D + D A++ +L
Sbjct: 359 SLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMK 418
Query: 388 ----DPKEARAGIQEVHFLPFNPTDK--RTALTYIDNAGKMHRVSKGAPEQILNLAHNKS 441
D +E + EV PF+ K + + +M + KGA EQ+L
Sbjct: 419 FGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFM-KGAYEQVLKYCTYYQ 474
Query: 442 DIERRVHAVID-----------KFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLF 490
+ + + + A GLR +A A G F+GL+ +
Sbjct: 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK--------GQLTFLGLVGIN 526
Query: 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESI 550
DPPR E + + GV + MITGD RRLGM + +S + +K +++
Sbjct: 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPS---KTSQSVSGEKLDAM 583
Query: 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
+ +++ K FA PEHK +IVK LQ R + MTGDGVNDAPALK ADIG+A+
Sbjct: 584 DDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMG 643
Query: 611 D-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR----IVVSGS 665
TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ I ++
Sbjct: 644 QTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703
Query: 666 LDFSN 670
+ F N
Sbjct: 704 MGFPN 708
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 290 bits (744), Expect = 5e-87
Identities = 205/690 (29%), Positives = 328/690 (47%), Gaps = 103/690 (14%)
Query: 22 PIEEVFENLRCSREGLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVMEAA 80
E + L GL++ ERL+ FG N+ EEKK + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 81 AIMAIALANGGGKPPDWQDFVGIITLLVINSTI-SFIEENNAGNAAAALMARLAPKGKVL 139
+M ++ D + II L+V+ S + FI+E+ A AA AL + VL
Sbjct: 77 MLMGVSYLT------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 140 R------DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPV- 192
R +G +E LVPGD+I + GDIIPADAR++ L I+QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 193 ----TKGPGDG--------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
K D + G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGI----------- 289
K + S++ +I ++VM P+ VL+I G+
Sbjct: 251 DK--------GVKSVSKLLIRFMLVMVPV-------------VLMINGLMKGDWLEAFLF 289
Query: 290 ---------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
P +P ++S +A G+ +S++ I K ++AI+ MD+LC+DKTGTLT
Sbjct: 290 ALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQ 349
Query: 341 NKLTVDKNLIEVFTKGVDADTVVLMA--AQASRTENQDAIDAAIVGMLAD--PKEARAGI 396
+K+ ++K++ + G ++ V+ MA +T ++ +D A++ L + ++ +
Sbjct: 350 DKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRW 406
Query: 397 QEVHFLPFNPTDKRTALTYIDNAGKMHR-VSKGAPEQILNLAHNK---------SDIERR 446
++V +PF+ D+R ++N ++ R + KGA E++L + +K S+ E+
Sbjct: 407 KKVDEIPFD-FDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKS 465
Query: 447 -VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFM---GLMPLFDPPRHDSAETIR 502
+ + + +G+R +AVA + + G D + + G + DPP+ + E I
Sbjct: 466 ELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIA 525
Query: 503 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL---I 559
G+NVK++TGD + + +G+ N LLG D I L +EL +
Sbjct: 526 ALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGAD----IEELSDEELAREL 577
Query: 560 EKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 619
K FA + P K I+ L+ H G GDG+NDAPAL+KAD+GI+V A D A+ A
Sbjct: 578 RKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637
Query: 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
SDI+L E L V+ V+ R F + Y
Sbjct: 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKY 667
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 283 bits (727), Expect = 3e-84
Identities = 207/710 (29%), Positives = 325/710 (45%), Gaps = 108/710 (15%)
Query: 5 EEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLK 64
V ++ + +P EE+++ EGL+ E G N+L +K +
Sbjct: 36 TAVPPSLSARCLKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWV 95
Query: 65 FLGFMW----NPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINST-ISFIEEN 119
L W NP + ++ ++ A + G+I L+V ST ++FI+E
Sbjct: 96 HL---WVCYRNPFNILLTILGAISYATEDLFA--------AGVIALMVAISTLLNFIQEA 144
Query: 120 NAGNAAAALMARLAPKGKVLR------DGRWNEQDASILVPGDIISIKLGDIIPADARLL 173
+ AA AL A ++ VLR + W E LVPGDII + GD+IPAD R+L
Sbjct: 145 RSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRIL 204
Query: 174 EGDPLKIDQSALTGESLPVTKGPGDG-------------VYSGSTCKQGEIEAVVIATGV 220
+ L + Q++LTGESLPV K + G+ G +AVVIATG
Sbjct: 205 QARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGA 264
Query: 221 HTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGID 279
+T+FG+ A V ++ FQ+ I ++ +I ++VM P+
Sbjct: 265 NTWFGQLAGRVSEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV---------- 306
Query: 280 NLLVLLIGG--------------------IPIAMPTVLSVTMAIGSHRLSQQGAITKRMT 319
VLLI G P +P +++ T+A G+ +LS+Q I KR+
Sbjct: 307 ---VLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLD 363
Query: 320 AIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQAS--RTENQDA 377
AI+ MD+LC+DKTGTLT +K+ ++ + ++ G ++ V+ A S +T ++
Sbjct: 364 AIQNFGAMDILCTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNL 420
Query: 378 IDAAIVGMLADPKEARAGI--QEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN 435
+D A++ + + Q++ +PF+ +R ++ +N + KGA E+ILN
Sbjct: 421 LDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILN 480
Query: 436 LAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ--- 482
+ + RR+ V D +GLR +AVA + +P D
Sbjct: 481 VCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLI 540
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
G + DPP+ +A ++ GV VK++TGD + + +G+ L+
Sbjct: 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLI 596
Query: 543 GQDKDESIAALPIDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPA 599
G D I L DEL E+ FA + P HK IV L+ H+ G GDG+NDAPA
Sbjct: 597 GSD----IETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPA 652
Query: 600 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
L+ ADIGI+V A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 653 LRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 8e-76
Identities = 205/699 (29%), Positives = 320/699 (45%), Gaps = 110/699 (15%)
Query: 22 PIEEVFENLRCSREGLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWV-MEA 79
+EE NL R+GL+ + A ERL +G N++ EK ++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 80 AAI---MAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKG 136
AAI L G+ D + I+T+++++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 137 KVLR------DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESL 190
VLR + E LVPGDI+ + GD+IPAD RL+E L I Q+ LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 191 PVTK--------------GPGDGV---------YSGSTCKQGEIEAVVIATGVHTFFGKA 227
PV K D + G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 228 AH-LVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLI 286
A +V T Q F + + S++ +I ++VM P+ VLLI
Sbjct: 271 AKSIVGTRAQTA-FDR--------GVNSVSWLLIRFMLVMVPV-------------VLLI 308
Query: 287 GGI--------------------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 326
G P +P ++S +A G+ ++++ + KR+ AI+
Sbjct: 309 NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGA 368
Query: 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTEN--QDAIDAAIV- 383
MDVLC+DKTGTLT +++ ++ +L G + V+ +A S ++ ++ +D A+V
Sbjct: 369 MDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVA 425
Query: 384 -GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLA----- 437
AG ++V LPF+ +R ++ D G+ + KGA E++L +A
Sbjct: 426 FAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD 485
Query: 438 ----HNKSDIER-RVHAVIDKFAERGLRSLAVAYQEVPEGRKDSP-----GGPWQFMGLM 487
+ R R+ A+ + + G R L VA +E+P G + G +
Sbjct: 486 GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFL 545
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
DPP+ +A I GV VK++TGD + + R +G+ P LLG +
Sbjct: 546 TFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE-- 599
Query: 548 ESIAALPIDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604
I A+ L +E+ FA + P K ++K LQA H G GDG+NDAPAL+ AD
Sbjct: 600 --IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657
Query: 605 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643
+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 1e-68
Identities = 181/704 (25%), Positives = 307/704 (43%), Gaps = 93/704 (13%)
Query: 37 LSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVM----EAAAIMAIALA---- 88
LSS E R ++G N+L EK FL +W LS AA++++ L
Sbjct: 62 LSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEP 118
Query: 89 --NGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALM-ARLAPKGKVLRDGRWN 145
W + V I+ +++ ++ + + L + A K V+R G+
Sbjct: 119 GEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQ 178
Query: 146 EQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVY--SG 203
+ +V GDI+S+ GD++PAD + G L+ID+S++TGES P+ KGP + SG
Sbjct: 179 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSG 238
Query: 204 STCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVG--------HFQKVLTAIGNFCICSI 255
+ +G +V A GV++F GK L+ Q G ++ IG F
Sbjct: 239 TVVNEGSGRMLVTAVGVNSFGGK---LMMELRQAGEDSTPLQEKLSELAGLIGKFG-MGS 294
Query: 256 AVGMIVEIIVMYPIQ--------DREYRPGIDNLLVLLIGGIPIAMPTV--LSVTMAI-- 303
AV + + + + Y + E + ++ + + +A+P L+VT+A+
Sbjct: 295 AVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAY 354
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI-EVF--------- 353
++ + + + + A E M +CSDKTGTLT N ++V + I E
Sbjct: 355 SMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRN 414
Query: 354 -TKGVDADTVVLMAAQASRTENQDA----------IDAAIVGM----LADPKEARAGIQE 398
K V V ++ +S E D + A++ L D +E RA +
Sbjct: 415 VPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKV 474
Query: 399 VHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQIL-----------NLAHNKSDIERRV 447
V PFN K ++ + GK KGA E +L D + R
Sbjct: 475 VKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRC 534
Query: 448 HAVIDKFAERGLRSLAVAYQEVPEG---RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRA 504
VI+ A LR++ +AY++ RKD P +G++ + DP R E ++
Sbjct: 535 ADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQEC 594
Query: 505 LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD-----KDESIAALPIDELI 559
G+ V+M+TGD + K R G+ T + A+ G++ +E LP
Sbjct: 595 QRAGITVRMVTGDNIDTAKAIARNCGILT--FGGLAMEGKEFRSLVYEEMDPILP----- 647
Query: 560 EKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARS 618
K A P K +V L+ + +TGDG NDAPALK AD+G ++ + T+ A+
Sbjct: 648 -KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKE 706
Query: 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 662
ASDI+L + + I+ AV R ++ ++ + + +++ + V+
Sbjct: 707 ASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVI 750
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 1e-63
Identities = 149/561 (26%), Positives = 229/561 (40%), Gaps = 90/561 (16%)
Query: 101 VGIITLLVINSTISFIEENNAGNAAAALMARLAPKG--KVLRDGRWNEQDASILVPGDII 158
+I L ++ + + A A AL+ LAPK V DG E + GDI+
Sbjct: 178 AMLIFLFLLGRYLEARAKGRARRAIRALLD-LAPKTATVVRGDGEEEEVPVEEVQVGDIV 236
Query: 159 SIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIAT 218
++ G+ IP D ++ G +D+S LTGESLPV K PGD V++G+ G + V
Sbjct: 237 LVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRV 295
Query: 219 GVHTFFGKAAHLV-DTTNQVGHFQKVLTAI-GNFCICSIAVGMIVEIIVMYPIQDREYRP 276
G T + LV + + Q++ + F + + + + ++
Sbjct: 296 GADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIA-ALTFALWPLFGGGDWET 354
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334
+ L +L+ P A+ L+ AI G R +++G + K A+E +A +D + DK
Sbjct: 355 ALYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDK 412
Query: 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQ---DAI-DAAIVGMLADPK 390
TGTLT K V +V D D ++ +AA + AI AA L D +
Sbjct: 413 TGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDVE 468
Query: 391 EARA----GIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERR 446
+ G++ +D RV G + + + R
Sbjct: 469 DFEEIPGRGVE----------------AEVDG----ERVLVGNARLLGEEGIDLPLLSER 508
Query: 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALN 506
I+ G + VA + +G++ L D R D+ E I
Sbjct: 509 ----IEALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALKA 551
Query: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566
LG+ V M+TGD + + LG IDE+ A
Sbjct: 552 LGIKVVMLTGDNRRTAEAIAKELG------------------------IDEV------RA 581
Query: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ PE K EIV+ LQA M GDG+NDAPAL AD+GIA+ TD A A+D+VL
Sbjct: 582 ELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMR 641
Query: 627 PGLSVIISAVLTSRAIFQRMK 647
LS + A+ SRA + +K
Sbjct: 642 DDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 1e-58
Identities = 142/570 (24%), Positives = 233/570 (40%), Gaps = 80/570 (14%)
Query: 105 TLLVINSTISFIEENNAGNAAAAL--MARLAPK-GKVLRDGRWNEQ-DASILVPGDIISI 160
LL + +EE G A+ AL + LAP +VL+ E+ L GDI+ +
Sbjct: 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIV 82
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGV 220
+ G+ IP D ++ G+ +D+SALTGES+PV K GD V++G+ G + V G
Sbjct: 83 RPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGE 141
Query: 221 HTFFGKAAHLV-DTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDRE--YRPG 277
+ + LV + + Q++ I ++ + ++ ++ +V + YR
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYR-- 199
Query: 278 IDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKT
Sbjct: 200 ---ALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 336 GTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAG 395
GTLT K TV IE ++ +L A A + + AIV
Sbjct: 255 GTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RY 302
Query: 396 IQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN--LAHNKSDIERRVHAVIDK 453
++ D + + G V G +I N + ++++
Sbjct: 303 AKKRGLELPKQED----VEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNE 358
Query: 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-NVK 512
+G + VA + +G++ L D R ++ E I G +
Sbjct: 359 GESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLV 405
Query: 513 MITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572
M+TGD + + LG IDE+ A + PE
Sbjct: 406 MLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPED 435
Query: 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632
K IVK LQ + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS +
Sbjct: 436 KLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSL 495
Query: 633 ISAVLTSRAIFQRMK-NYTIYAVSITIRIV 661
+A+ SR + +K N + I
Sbjct: 496 PTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 2e-57
Identities = 190/773 (24%), Positives = 334/773 (43%), Gaps = 134/773 (17%)
Query: 4 KEEVLEAVLKE-TVDLENIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKLEEKKES- 60
K+ L+ + KE +D + ++E+ GLS+ A E L+ G N L +
Sbjct: 2 KKRDLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTP 61
Query: 61 ---KFLKFLGFMWNPLSWVMEAAAIMAIAL-ANGGGKPPDWQDFVGII--TLLVINSTIS 114
KF + L ++ L W+ +A + A+ +P + ++G++ +++I S
Sbjct: 62 EWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFS 121
Query: 115 FIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174
+ +E + + + + V+RDG +A +V GD++ +K GD IPAD R++
Sbjct: 122 YYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIIS 181
Query: 175 GDPLKIDQSALTGESLPVTKGPG----------DGVYSGSTCKQGEIEAVVIATGVHTFF 224
K+D S+LTGES P T+ P + + + C +G +V+ TG T
Sbjct: 182 AQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVM 241
Query: 225 GKAAHLVDTTN--------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRP 276
G+ A L ++ HF ++T + F S I+ +I+ Y +
Sbjct: 242 GRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGYTWLE----- 293
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 336
+ L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTG
Sbjct: 294 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 353
Query: 337 TLTLNKLTV-----DKNLIEVFT----KGVDAD-------TVVLMAAQASRTE---NQDA 377
TLT N++TV D + E T GV D + +A +R Q+
Sbjct: 354 TLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQEN 413
Query: 378 I---------DAAIVGML-------ADPKEARAGIQEVHFLPFNPTDKR--TALTYIDNA 419
+ DA+ +L E R +V +PFN T+K + D
Sbjct: 414 VPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPR 473
Query: 420 GKMH-RVSKGAPEQILN-----LAHNK--------SDIERRVHAVIDKFAER--GLRSLA 463
H V KGAPE+IL L H K + + + + ER G L
Sbjct: 474 DPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLY 533
Query: 464 VAYQEVPEGRK------DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD 517
+ ++ PEG + + P F+GL+ + DPPR + + + + G+ V M+TGD
Sbjct: 534 LPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 593
Query: 518 QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAA---LPIDELIEKADG---------- 564
K + +G+ + G + E IAA +P+ ++ +
Sbjct: 594 HPITAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645
Query: 565 ------------------FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG
Sbjct: 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 705
Query: 607 IAVADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658
+A+ A +D ++ A+D++L + + I++ V R IF +K Y ++ I
Sbjct: 706 VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNI 758
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 7e-57
Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 103 IITLLVINSTISFIEENNAGNAAAALMARLAPKG-KVLRDGRWNEQDASILVPGDIISIK 161
I+ L++IN+ + +E A A AL L P V+RDG+ E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVH 221
GD +PAD R++EG L++D+SALTGESLPV K GD V++G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 222 TFFGKAAHLVDTTNQV-GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280
T GK A LV+ Q++L + + I + + + + +++ + ++ +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 2e-41
Identities = 157/659 (23%), Positives = 254/659 (38%), Gaps = 148/659 (22%)
Query: 138 VLRDGRWNEQDASILVPGDIISIKL--GDIIPADARLLEGDPLKIDQSALTGESLPVTK- 194
V+R+G+W + LVPGDI+SI +P D+ LL G + +++S LTGES+PV K
Sbjct: 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
Query: 195 ---GPGDG---VYSGSTCK------------------QGEIEAVVIATGVHTFFGKAAHL 230
GD ++ T K A+V+ TG T G+ L
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---L 348
Query: 231 VDT----TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLI 286
V + +V F K F +G I II + + + +L ++ I
Sbjct: 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITI 408
Query: 287 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV- 345
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L +
Sbjct: 409 V-VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467
Query: 346 -------DKNLIEVFT---KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA- 394
++ +++ T + T +A S T+ ++ +VG D K A
Sbjct: 468 GVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTK----LEGKLVGDPLDKKMFEAT 523
Query: 395 ---------------------------GIQEVHFLPFNPTDKRTA-LTYIDNAGKMHRVS 426
+ + F+ +R + + ++
Sbjct: 524 GWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFV 583
Query: 427 KGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP--------EGRKDSPG 478
KGAPE I +L + V+ + G R LA+AY+E+P + +D+
Sbjct: 584 KGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVE 642
Query: 479 GPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETG-----RRL 529
F+G + +P + D+ E I+ + MITGD + +E G L
Sbjct: 643 SNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTL 702
Query: 530 GMGTNMYPSSA------------------------LLGQDKDESIAALP----------- 554
+ P S LGQD E + A
Sbjct: 703 ILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFA 762
Query: 555 ---------IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605
+ L+ FA + P+ K +V+ LQ + GM GDG ND ALK+AD+
Sbjct: 763 VLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADV 822
Query: 606 GIAV--ADATDAARSASDIVLTEPGLSVII---SAVLTSRAIFQRMKNYT-IYAVSITI 658
GI++ A+A+ AA S + +VI A++TS +F+ M Y+ I S++I
Sbjct: 823 GISLSEAEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI 881
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 7e-40
Identities = 89/268 (33%), Positives = 131/268 (48%), Gaps = 37/268 (13%)
Query: 426 SKGAPEQILNLAHN-----------KSDIERRVHAVIDKFAER-GLRSLAVAYQEVPEGR 473
KGAPE +L + ++ + +VI + LR LA+A++++P+ R
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 474 K-DSPGGPWQFM---------GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 523
+ D P F G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 524 ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG--------FAGVFPEHKYE 575
RR+G+ P + + S DE+ F+ V P HK E
Sbjct: 569 AICRRIGI---FSPDEDVTFK----SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSE 621
Query: 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635
+V+ LQ + I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I++A
Sbjct: 622 LVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAA 681
Query: 636 VLTSRAIFQRMKNYTIYAVSITIRIVVS 663
V RAI+ MK + Y +S I VV
Sbjct: 682 VEEGRAIYNNMKQFIRYMISSNIGEVVC 709
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 9e-38
Identities = 145/585 (24%), Positives = 233/585 (39%), Gaps = 100/585 (17%)
Query: 71 NPLSWVMEAAAIMAIAL---ANGGGKPPDWQDFVGII------TLLVINSTISFIEENNA 121
NP+ +V+E +I+ L + G + F I T+L N + E
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGK 91
Query: 122 GNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
A + + ++LR DG A+ L GDI+ ++ G+IIP+D ++EG +
Sbjct: 92 AQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150
Query: 181 DQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD----- 232
D+SA+TGES PV + G V G+ ++ + A TF + LV+
Sbjct: 151 DESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQ 210
Query: 233 -TTNQVGH--FQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGID--NLLVLLIG 287
T N++ LT I ++ + +YP L+ LL+
Sbjct: 211 KTPNEIALTILLSGLTLI-----------FLLAVATLYPFAIYSGGGAASVTVLVALLVC 259
Query: 288 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVD 346
IP + +LS G R++Q I A+E +D L DKTGT+TL N+ +
Sbjct: 260 LIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE 319
Query: 347 KNLIEVFTKGVDADTVVLMAAQAS---RTENQDAIDAAIVGMLADPKEARAGIQEVHFLP 403
I V GV + + A AS T +I + + +E F+P
Sbjct: 320 --FIPV--PGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELRE-DDLQSHAEFVP 374
Query: 404 FNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAH-NKSDIERRVHAVIDKFAERGLRSL 462
F +T ++ +D G + KGA + I I + A +D+ + G L
Sbjct: 375 FT---AQTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPL 430
Query: 463 AVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ---- 518
V + +G++ L D + E +G+ MITGD
Sbjct: 431 VVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477
Query: 519 LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578
AI E G +D+ I +A PE K +++
Sbjct: 478 AAIAAEAG----------------------------VDDFIAEAT------PEDKLALIR 503
Query: 579 RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ QA + MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 504 QEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 2e-36
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 30/297 (10%)
Query: 79 AAAIMAIALA---NGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPK 135
AA ++ LA G + + I+ +LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 136 GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195
KVLRDGRW+ A LVPGDI+ + +GD +PAD R+L L++DQS LTGES+ V K
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 196 ----PGDG---------VYSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDTTNQVGHFQ 241
P + ++SG+ G+ VV+ TG+ T GK + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPI--------QDREYRPGIDNLLV---LLIGGIP 290
K L G + S +G+I ++ + I + I + L + IP
Sbjct: 195 KKLDEFGE--LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIP 252
Query: 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK 347
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V K
Sbjct: 253 EGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 5e-33
Identities = 104/362 (28%), Positives = 164/362 (45%), Gaps = 64/362 (17%)
Query: 35 EGLSSQAAEERLSIFGYNKLE-EKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGK 93
EGL+ A+ RL G N+LE + L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 94 PPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILV 153
DW + I ++ +N I FI+E A +L +P V+R+G+ + D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP------------GDGV- 200
PGDI +K GD IPAD RL+E D++ LTGESLPV K GD +
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 201 --YSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 231
+S S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 232 DTTNQVGHF---------QKVLTAIGNFCICSIAVGMIVEIIVMYPIQ-DREYRPGIDNL 281
T G F + L+ + C + +I IIVM + D + I
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAI-YA 313
Query: 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 341
+ L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T
Sbjct: 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQG 373
Query: 342 KL 343
K+
Sbjct: 374 KM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (323), Expect = 9e-31
Identities = 155/613 (25%), Positives = 237/613 (38%), Gaps = 154/613 (25%)
Query: 69 MW-NPLSWVMEAAAIM--AIALANGGGKPPDWQDFVGIITLLVINSTISF--IEENNA-- 121
NP+ +V+E +I+ + +A + F ITL + T+ F E A
Sbjct: 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLW-FTVLFANFAEALAEG 88
Query: 122 -GNAAAA--------LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARL 172
G A A AR K+ G E A+ L GDI+ ++ G+IIPAD +
Sbjct: 89 RGKAQADSLRGAKKDTFAR-----KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEV 143
Query: 173 LEGDPLKIDQSALTGESLPVTKGPGD---GVYSGSTCKQGEIEAVVIATGVHTFFGKAAH 229
+EG +D+SA+TGES PV + G V G+ I + A +F +
Sbjct: 144 IEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIA 202
Query: 230 LVDTTNQVGHFQK------------VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRP- 276
LV+ + QK LT I ++ + + P
Sbjct: 203 LVEGAKR----QKTPNEIALTILLAGLTII-----------FLLVVATLPPFAAYSGGAL 247
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSD 333
I L+ LL+ IP + +LS AIG R+ Q I A+E +D L D
Sbjct: 248 SITVLVALLVCLIPTTIGGLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLD 304
Query: 334 KTGTLTL-NKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADP--- 389
KTGT+TL N+ + + V GV ++ DAA + LAD
Sbjct: 305 KTGTITLGNRQASE--FLPV--PGVTE---------------EELADAAQLSSLADETPE 345
Query: 390 --------------KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN 435
+E F+PF+ +T ++ +D G + KGA + I
Sbjct: 346 GRSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRR 400
Query: 436 LAH-NKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494
N + A +D+ A +G L VA E + +G++ L D +
Sbjct: 401 YVESNGGHFPAELDAAVDEVARKGGTPLVVA-----EDNR--------VLGVIYLKDIVK 447
Query: 495 HDSAETIRRALNLGVNVKMITGD-QL---AIGKETGRRLGMGTNMYPSSALLGQDKDESI 550
E +G+ MITGD L AI E G
Sbjct: 448 PGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG------------------------ 483
Query: 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
+D+ + +A PE K ++++ QA + MTGDG NDAPAL +AD+G+A+
Sbjct: 484 ----VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 533
Query: 611 DATDAARSASDIV 623
T AA+ A ++V
Sbjct: 534 SGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 1e-29
Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 48/342 (14%)
Query: 350 IEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDK 409
I VF K D L + N++ + + K A + + PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSL---SQHNEKPGSAQFEFIAEFPFDSEIK 538
Query: 410 RTALTYIDNAGKMHRV-SKGAPEQILNLAHN-------------KSDIERRVHAVIDKFA 455
R A Y DN G+ + + +KGA E+I+ + D E + A ++ A
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDREL-IIANMESLA 597
Query: 456 ERGLRSLAVAYQEVPEGR------------KDSPGGPWQFMGLMPLFDPPRHDSAETIRR 503
GLR LA A + + + + +F+GL+ ++DPPR++SA + +
Sbjct: 598 AEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEK 657
Query: 504 ALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSS-------ALLGQD----KDESIA 551
G+NV M+TGD K + +G + N + G DE +
Sbjct: 658 CHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVD 717
Query: 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA- 610
L L+ A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 718 DLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGI 772
Query: 611 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652
+ +D A+ ASDIVL++ + I++A+ R +F + + ++
Sbjct: 773 NGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLH 814
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 1e-29
Identities = 147/578 (25%), Positives = 236/578 (40%), Gaps = 83/578 (14%)
Query: 69 MWNPLSWVMEAAAIM----AIALANGGGKPPDWQDFVGI------ITLLVINSTISFIEE 118
NP+ +++ +++ IA A+ G + F I IT+L N + E
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 119 NNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP 177
A + + K+LR DG ++ A L GDI+ ++ GD+IP D ++EG
Sbjct: 90 RGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA 149
Query: 178 LKIDQSALTGESLPVTKGPGD---GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234
+D+SA+TGES PV K G V G+ + A TF + LV+
Sbjct: 150 -SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208
Query: 235 NQVGHFQKVLTAIG-NFCICSIAVGMIVEIIVMYPIQDREYRP-GIDNLLVLLIGGIPIA 292
+ +K I + ++ + ++ ++P + L+ LL+ IP
Sbjct: 209 QR----RKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTT 264
Query: 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKNLIE 351
+ +LS G R+ I A+E +D L DKTGT+TL N+L + I
Sbjct: 265 IGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASE--FIP 322
Query: 352 VFTKGVDADTVVLMAAQAS-RTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKR 410
+GVD T+ A AS + + I+ +E F+ F R
Sbjct: 323 A--QGVDEKTLADAAQLASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFT-AQTR 379
Query: 411 TALTYIDNAGKMHRVSKGAPEQILN-LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEV 469
+ +DN G+M R KGA + I + N I + +D+ A +G L V
Sbjct: 380 MSGINLDN-GRMIR--KGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC---- 432
Query: 470 PEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKET 525
E + G++ L D + E + +G+ MITGD AI E
Sbjct: 433 -EDNR--------IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA 483
Query: 526 GRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKH 585
G +D+ I +A PE K ++++ QA
Sbjct: 484 G----------------------------VDDFIAEAT------PEDKIALIRQEQAEGK 509
Query: 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 510 LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (311), Expect = 2e-29
Identities = 127/569 (22%), Positives = 237/569 (41%), Gaps = 77/569 (13%)
Query: 100 FVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDII 158
+ ++TL+ N + + E A A + K + ++ DG + DAS L G I+
Sbjct: 70 IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIV 129
Query: 159 SIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEAVV 215
+ G+ IP D ++++G +D+SA+TGES PV K G D V G++ +E +
Sbjct: 130 RVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188
Query: 216 IATGVHTFFGKAAHLVD------TTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI 269
+ H+F K LV+ T N++ F ++T + + +V I+ MYP+
Sbjct: 189 TSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMT---------LTIIFLVVILTMYPL 239
Query: 270 QD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMD 328
+ I L+ L + IP + +LS G R++Q + K ++E ++
Sbjct: 240 AKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVN 299
Query: 329 VLCSDKTGTLTL-NKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLA 387
VL DKTGT+T N++ F + L+ A + D + + LA
Sbjct: 300 VLILDKTGTITYGNRMADA------FIPVKSSSFERLVKAAYESSIADDTPEGRSIVKLA 353
Query: 388 DPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN-LAHNKSDIERR 446
+ + ++PF + + + + V KGAP ++ + I
Sbjct: 354 YKQHIDLPQEVGEYIPFTAETRMSGVKFTT-----REVYKGAPNSMVKRVKEAGGHIPVD 408
Query: 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALN 506
+ A++ +++G L V +G++ L D + E R
Sbjct: 409 LDALVKGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFRELRE 455
Query: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566
+G+ M TGD + G +D + +
Sbjct: 456 MGIETVMCTGDNELTAATIAKEAG------------------------VDRFVAECK--- 488
Query: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
PE K +++ QA+ HI MTGDG NDAPAL +A++G+A+ T +A+ A++++ +
Sbjct: 489 ---PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLD 545
Query: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAVS 655
+ ++ VL + + + T ++++
Sbjct: 546 SNPTKLMEVVLIGKQLLMTRGSLTTFSIA 574
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 9e-29
Identities = 141/531 (26%), Positives = 224/531 (42%), Gaps = 97/531 (18%)
Query: 127 ALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA + LRDG E + L PGD+I + G +PAD +LL D+SALT
Sbjct: 236 ALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALT 294
Query: 187 GESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ--------VG 238
GES+PV + G+ V +G+T + V++ + + HL++ + +
Sbjct: 295 GESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFID 354
Query: 239 HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLS 298
F ++ T + ++ V ++ ++ P Q+ YR L +LLI G P A+ V+S
Sbjct: 355 RFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VIS 405
Query: 299 VTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG 356
AI S +++GA+ K A+E++ + + DKTGTLT K V I T G
Sbjct: 406 TPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD--IHPAT-G 462
Query: 357 VDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYI 416
+ ++ +AA A++ LA A ++ L + + AL
Sbjct: 463 ISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAGS 510
Query: 417 ----DNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG 472
G+ + AP ++ LA +++ + E +++ + +
Sbjct: 511 GIEGQVNGERVLIC--APGKLPPLA---DAFAGQINEL-----ESAGKTVVLVLRN---- 556
Query: 473 RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532
+GL+ L D R D+ + I LG+ M+TGD
Sbjct: 557 --------DDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN-------------- 594
Query: 533 TNMYPSSALLGQDKDESIAA-LPIDELIEKADGF-AGVFPEHKYEIVKRLQARKHICGMT 590
P +A +IA L ID F AG+ PE K + V L + M
Sbjct: 595 ----PRAA-------AAIAGELGID--------FRAGLLPEDKVKAVTELNQHAPL-AMV 634
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641
GDG+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 635 GDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-28
Identities = 136/510 (26%), Positives = 212/510 (41%), Gaps = 93/510 (18%)
Query: 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEA 213
PG ++ + GD +P D + +G+ +D++ LTGE +P KG GD V++G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 214 VVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFC--ICSIAVGMIVEIIVM----- 266
A G HT + +V Q IG I ++ V ++V I ++
Sbjct: 402 RASAVGSHTTLSRIIRMVRQA------QSSKPEIGQLADKISAVFVPVVVVIALVSAAIW 455
Query: 267 YPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIE 322
Y P I LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 456 YFFGPA---PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQ 512
Query: 323 EMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-KGVDADTVVLMAAQASRTENQDAIDAA 381
+ +D L DKTGTLT K V + V T GVD + +AA + +
Sbjct: 513 RASTLDTLVFDKTGTLTEGKPQV----VAVKTFNGVDEAQALRLAAALEQGSSHPL---- 564
Query: 382 IVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKS 441
ARA + + + + L + +G+ + Q L L +
Sbjct: 565 ----------ARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQAL-LNEQQV 613
Query: 442 DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETI 501
D + + A I A +G + +A + L+ + DP R DS +
Sbjct: 614 DTKA-LEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAAL 659
Query: 502 RRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDE 557
+R G + M+TGD AI KE G IDE
Sbjct: 660 QRLHKAGYRLVMLTGDNPTTANAIAKEAG----------------------------IDE 691
Query: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
+I AGV P+ K E +KRLQ++ M GDG+NDAPAL +AD+GIA+ +D A
Sbjct: 692 VI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAI 745
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+ I L L + A+ SRA + MK
Sbjct: 746 ETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 6e-26
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 30/163 (18%)
Query: 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 544
G++ L D + ++ E I+ G+ M+TGD K + LG
Sbjct: 407 GVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG-------------- 452
Query: 545 DKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604
I+ + A V P+ K ++K+LQ + + M GDG+NDAPAL +AD
Sbjct: 453 ----------IENV------RAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQAD 496
Query: 605 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+GIA+ TD A A+D+VL L+ + +A+ SR +R+K
Sbjct: 497 VGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 6e-25
Identities = 85/321 (26%), Positives = 137/321 (42%), Gaps = 42/321 (13%)
Query: 73 LSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAAL--MA 130
+++ A++A G + F L+ ++E G A+ AL +A
Sbjct: 30 VAYGYSLVALLA-NQVLTGLHVHTF--FDASAMLITFILLGRWLEMLAKGRASDALSKLA 86
Query: 131 RLAPKG--KVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
+L P + DG E +L PGDI+ + G+ IP D ++EG+ ++D+S +TGE
Sbjct: 87 KLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGE 145
Query: 189 SLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ------------ 236
SLPV K GD V +G+ G + ATG T + LV Q
Sbjct: 146 SLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKV 205
Query: 237 VGHFQKVLTAIGNFCICS-IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIG---GIPIA 292
G+F V+ AI + +G + + VL+I + +A
Sbjct: 206 AGYFVPVVIAIALITFVIWLILGADFVFALEVAVT------------VLIIACPCALGLA 253
Query: 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV 352
PTV+ A+ + ++ G + K A+E A +D + DKTGTLT K TV + V
Sbjct: 254 TPTVI----AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV--TDVHV 307
Query: 353 FTKGVDADTVVLMAAQASRTE 373
F + + + L AA + +E
Sbjct: 308 FGESDRDELLALAAALEAGSE 328
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 6e-25
Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 11/248 (4%)
Query: 105 TLLVINSTISFIEENNAGNAAAALMA--RLAP-KGKVLRDGRWNEQDASILVPGDIISIK 161
LL++ S +EE +G A AL A LAP +VLR G E L GD++ +K
Sbjct: 23 LLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVK 82
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVH 221
G+ +P D +L G +D+SALTGES+PV K PGD V++G+ G + VV
Sbjct: 83 PGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPAD 141
Query: 222 TFFGKAAHLV-DTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280
+ K +LV + ++ Q+ + + + + +V ++ + +
Sbjct: 142 STIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPF--WVYR 199
Query: 281 LLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 338
LVLL+ P A+ V+S A ++ G + K A+E +A + + DKTGTL
Sbjct: 200 ALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTL 257
Query: 339 TLNKLTVD 346
T + V
Sbjct: 258 TTGRPKVV 265
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 4e-20
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
++G + L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
IDE+ A + PE K EIVK L+ + M GDG+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 601 KKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659
AD+GIA+ A +D A +D+VL LS + A+ +R + +K + A+ I +
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILL 501
Query: 660 IVVSGSL 666
+++
Sbjct: 502 LILLALF 508
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 5e-18
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 16 VDLENIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKLEE-KKESKFLKFLGFMWNPL 73
+D + +EEV E L+ E GLSS+ A RL +G N+L KK S L+FL NPL
Sbjct: 2 LDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPL 61
Query: 74 SWVMEAAAIMAIAL 87
+++ AAA+++ L
Sbjct: 62 IYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 6e-14
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 20 NIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVM 77
+ +EEV L E GL+ AEERL +G N+L E+K +S + FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 78 EAAAIMA 84
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 2e-07
Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 544
GL+ L DP + E ++ G+ + ++TGD R LG+ + +
Sbjct: 87 GLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSAD 141
Query: 545 DKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604
P ++ E A ++ L + M GDGVND PA K A
Sbjct: 142 LYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 6e-07
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASD 621
FAG PE K +I++ L+ R M G+G ND AL++AD+GI + +D
Sbjct: 74 FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTAD 133
Query: 622 IVLTEPGLSVIISA 635
+VL E + +
Sbjct: 134 VVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 2e-04
Identities = 59/335 (17%), Positives = 103/335 (30%), Gaps = 119/335 (35%)
Query: 312 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL---------------------------- 343
A + EE+ ++ + SDKTGTLT N +
Sbjct: 344 PASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLG 403
Query: 344 --TVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAI----------------------- 378
++N + V +KG L+ + N I
Sbjct: 404 SYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPE 463
Query: 379 ----------DAAIVGMLAD---------PKEARAGIQEV---------HFLPFNPTDKR 410
+AA+V D PK I+ + L FN KR
Sbjct: 464 EITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKR 523
Query: 411 TALTYIDNAGKMHRVSKGAPEQILN-LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEV 469
++ + G++ + KGA I L+ + + ++ +A GLR+L +AY+E+
Sbjct: 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYREL 583
Query: 470 PEGRKDSPGGPWQ-----------------------------FMGLMPLFDPPRHDSAET 500
E + W +G + D + ET
Sbjct: 584 SEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPET 639
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 535
I G+ + ++TGD++ ET +G +
Sbjct: 640 IELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 376 DAIDAAIVG----MLADPKEARAGIQEVHFLPFNPTDKR-TALTYIDNAGKMHRVSKGAP 430
D ++A++ + D +E RA V +PFN KR + + +++ KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 431 EQILNL 436
E+IL
Sbjct: 82 ERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 672 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.92 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.6 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.47 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.43 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.42 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.41 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.41 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.39 | |
| PLN02887 | 580 | hydrolase family protein | 99.33 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.33 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.33 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.31 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.27 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.23 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.2 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.19 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.17 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.13 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.12 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.1 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.01 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.95 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.94 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.89 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.86 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.86 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.86 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.71 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.68 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.68 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.58 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.5 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.49 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.48 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.44 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.37 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.35 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.34 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.32 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.31 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.31 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.29 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.26 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.19 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.11 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.1 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.09 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.05 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.05 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.02 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.99 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.96 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.93 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.93 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.83 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.81 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.8 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.78 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.72 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.71 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.7 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.67 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.65 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.64 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.61 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.58 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.57 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.49 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.48 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.4 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.38 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.34 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.33 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.29 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.26 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.23 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.22 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.18 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.18 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.14 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.14 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.11 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.1 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 97.06 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.04 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.03 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.01 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.97 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.93 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.89 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.88 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.82 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.82 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.8 | |
| PLN02940 | 382 | riboflavin kinase | 96.77 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.67 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.66 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.59 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.42 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.39 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.33 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.23 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.23 | |
| PLN02811 | 220 | hydrolase | 96.14 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.1 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.05 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.7 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.63 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.62 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.55 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.51 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.5 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 95.47 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.41 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.38 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.22 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.16 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 95.08 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 95.08 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 95.06 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 94.36 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 94.2 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.1 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 93.96 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.86 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.58 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 93.52 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.46 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.04 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 92.79 | |
| PLN02151 | 354 | trehalose-phosphatase | 92.28 | |
| PLN02423 | 245 | phosphomannomutase | 91.2 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 91.04 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 90.97 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 90.66 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 90.12 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 88.92 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 88.92 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 88.73 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 86.76 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 86.51 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 85.45 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 85.43 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 85.29 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 85.25 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 84.23 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 84.17 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 83.77 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 83.44 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 82.51 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 82.28 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 81.54 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 80.54 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-115 Score=927.37 Aligned_cols=643 Identities=32% Similarity=0.492 Sum_probs=550.8
Q ss_pred cccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005879 17 DLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 94 (672)
+.|..+.+|+.+.|.++ .+|||.+|+.+|+++||.|+++... .+.|..+++||.+|+..+|++++++|+.+.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 56788999999999999 7899999999999999999999866 566778999999999999999999999996
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe
Q 005879 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (672)
Q Consensus 95 ~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~ 174 (672)
.|.+.+.|.++++++..+.++|||++++++++|+++.|+.++|+|+|+.+.+++.+|||||||.|+-||+||||.+|++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 6778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEeccCcCCCCcccccCC--------------CCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCCh
Q 005879 175 GDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGH 239 (672)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~ 239 (672)
..++.||||+|||||.|+.|.. .|++|+||.+..|.++++|+.||.+|.+|++.+.++.. ++++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999953 35799999999999999999999999999999888877 66899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--Hhhc---c-C---ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhh
Q 005879 240 FQKVLTAIGNFCICSIAVGMIVEIIV--MYPI---Q-D---REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (672)
Q Consensus 240 ~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~ 310 (672)
+|+.++.+++.+.-++.++.+..++. .|+. . + ..+...+..++++.++++|++||+.++++++.+.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988663332222222222 2221 1 2 334455667788999999999999999999999999999
Q ss_pred CCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecc-----------cCCC------------------hH-
Q 005879 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-----------KGVD------------------AD- 360 (672)
Q Consensus 311 ~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------~~~~------------------~~- 360 (672)
++++||...++|+||.+++||+|||||||+|+|.+.++++.... .+++ .+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999876542110 0000 11
Q ss_pred --HHHHHHHHcccc------c-----ccchHHHHHHhhcC-----ChH---H-----------HhcccceEEEecCCCCC
Q 005879 361 --TVVLMAAQASRT------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARAGIQEVHFLPFNPTD 408 (672)
Q Consensus 361 --~~~~~~~~~~~~------~-----~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~~f~~~~ 408 (672)
+++..++.++.. . .+.|.+.|+.-... +.. . ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 223333333311 1 34677888764431 100 0 11223555889999999
Q ss_pred ceEEEEEEeCCCe--EEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCC---
Q 005879 409 KRTALTYIDNAGK--MHRVSKGAPEQILNLAHN------------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPE--- 471 (672)
Q Consensus 409 ~~~~v~~~~~~~~--~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~--- 471 (672)
|+|++.+.++.++ +..|+|||+|.++++|+. +...++.+.+...+|+++|+|||++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999866554 788999999999999964 12457889999999999999999999997663
Q ss_pred --------CCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--CCCccc
Q 005879 472 --------GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSAL 541 (672)
Q Consensus 472 --------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~~~~~~ 541 (672)
..+...|.+|+|+|++++.||+|++++++|+.|+++||+|+|+|||+..||.+||+++|+.... .....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 1245678999999999999999999999999999999999999999999999999999997643 345788
Q ss_pred ccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhcc
Q 005879 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 620 (672)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~a 620 (672)
+|.+++ .++..+.+....+..+|+|++|.+|.++|+.||+.|+.|+|+|||.||+||||.||+||||| +|++.+|+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 888887 47788888888999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 005879 621 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLD 667 (672)
Q Consensus 621 d~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 667 (672)
|+|+.||||++|..|+++||.+|.|||+|+.|+++.|+..+++.+++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~ 761 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLT 761 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987666543
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-112 Score=974.66 Aligned_cols=612 Identities=61% Similarity=0.965 Sum_probs=545.1
Q ss_pred CCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 005879 36 GLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISF 115 (672)
Q Consensus 36 GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~ 115 (672)
|||++|+++|+++||+|+++.+++++|..|+++|++|+.|+++++++++++++ .|.+++.++++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888889999999999999999999999874 78899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccC
Q 005879 116 IEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (672)
Q Consensus 116 ~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~ 195 (672)
++++++++++++|.++.+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999987799999999999999999
Q ss_pred CCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Q 005879 196 PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREY 274 (672)
Q Consensus 196 ~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (672)
+|+.+|+||.+.+|+++++|++||.+|.+|++.+++++++ +++++++.+++++.+++++.++.+++.+++++...+.+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998874 667999999999988766554444444444443245677
Q ss_pred cchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecc
Q 005879 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT 354 (672)
Q Consensus 275 ~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 354 (672)
..++...+++++++|||+||++++++++.++++|+++|+++|+++++|+||.+|++|||||||||+|+|++.+++ ...
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~--~~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL--PFF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE--ecC
Confidence 788889999999999999999999999999999999999999999999999999999999999999999998754 222
Q ss_pred cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEEEEeC-CCeEEEEEcCcHHHH
Q 005879 355 KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQI 433 (672)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~-~~~~~~~~KGa~e~i 433 (672)
.+.+.++++.+++.+++..+.||++.|++.+..+....+..++.++.+||++.+++|++.+... +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2356677777777666566679999999987665444455678889999999999999888755 377888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEE
Q 005879 434 LNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (672)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~ 513 (672)
++.|+...+.++++.+.+++++.+|+|++++||++ .|.+|+|+|+++|+||+||+++++|++|+++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888899999999999999999973 2578999999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCCCc-ccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECC
Q 005879 514 ITGDQLAIGKETGRRLGMGTNMYPSS-ALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (672)
Q Consensus 514 ~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGD 592 (672)
+|||++.+|.++|+++||..+..... ...+.+. +.++..++.+.+++.++|+|++|+||.++|+.||++|+.|+|+||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 99999999999999999975322111 1222222 245566788899999999999999999999999999999999999
Q ss_pred CccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005879 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 593 g~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|.||+|||++||||||||+|+|.+|++||+|++++++..+++++++||++|+||++|+.|.++.|+..++.++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~ 615 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFG 615 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998755443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-112 Score=979.63 Aligned_cols=634 Identities=31% Similarity=0.469 Sum_probs=556.6
Q ss_pred cccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccch-HHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005879 17 DLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 95 (672)
..+..+.+++++.|+++.+|||++|+++|+++||+|+++.++++ +|..|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 45778999999999999999999999999999999999988765 6678999999999999999999999874
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC------CeEEEEeCCCCCCCcEEEEcCCCeeccc
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGDIIPAD 169 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiI~l~~G~~iPaD 169 (672)
.|.+++.|+++++++.++++++++++++++++|.++.+++++|+|| |++++|++++|+|||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 7888899999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred EEEEecCCeEEeccCcCCCCcccccCCCC-------------cceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005879 170 ARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
|+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|++.+++.++ .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988899999999999999998874 799999999999999999999999999999998876 6
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005879 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.+++++++++.+.++.+.+.+++.+ +...+|..++...+++++++|||+||++++++++.++.+|+++|+++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~-~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLING-YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 67999999999988765444333333333222 23346777888889999999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--HH
Q 005879 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--KE 391 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~ 391 (672)
|+++++|+||++|++|||||||||+|+|++.+.. . ..+.+.++++..++..+.. ...||+|.|++.+.... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999997642 1 1233455666665554332 24689999998875432 12
Q ss_pred HhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeE
Q 005879 392 ARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLRS 461 (672)
Q Consensus 392 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r~ 461 (672)
....++.++.+||++.+++|++++...++..+.++||+||.++++|+.. ++..+.+.+..++++++|+||
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 3346788899999999999998887667778899999999999999741 234566777889999999999
Q ss_pred EEEEeeecCCCCCC---CCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC
Q 005879 462 LAVAYQEVPEGRKD---SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 538 (672)
Q Consensus 462 l~~a~~~l~~~~~~---~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~ 538 (672)
+++||++++..+.+ ..|.+++|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.++|+++||. ..
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD----AG 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----cc
Confidence 99999987643321 236789999999999999999999999999999999999999999999999999995 24
Q ss_pred cccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhh
Q 005879 539 SALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (672)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~ 618 (672)
.++.|.+++ .++++++.+.+++..+|+|++|+||.++|+.||++|++|+|+|||.||+|||++||||||||+|+|.||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 577887776 4677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 619 ~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
+||+|++++++..|++++++||++|+||+|++.|.++.|+..++.+++
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~ 719 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLV 719 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999988666654
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-114 Score=891.66 Aligned_cols=657 Identities=87% Similarity=1.280 Sum_probs=637.0
Q ss_pred HHHhhcccccccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005879 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (672)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 87 (672)
.++.++|-.|...++.++++++|++.++|||++|+++|+++||.|++..++.+.+++|+.+||+|+.|++..++++++.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78888888889999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeec
Q 005879 88 ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIP 167 (672)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iP 167 (672)
.++.+.+++|.+++.|.+++++++.+++++|+++.+...+|++.+.++++|+|||+|.+++.++||||||+.++.|++||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHH
Q 005879 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247 (672)
Q Consensus 168 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (672)
||++|++|+-|.||+|.|||||.|+.|++|+.+|+||+|++|++.++|++||.+|..|+..+++..+.+..+|++.++.|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCc
Q 005879 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (672)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v 327 (672)
++++++.+++.+++.+.+.|+.+.+.+...+.+.+.+++..+|.++|.++++..++++.||+++|.++|..+++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999888888888888888888888888888889999999999999999999999999999999999999999
Q ss_pred cEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCC
Q 005879 328 DVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPT 407 (672)
Q Consensus 328 ~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~ 407 (672)
|++|+|||||||.|++.+.+..++.+.++.+++++++.++.+++.++.|.+|.|+++++.+|++.+.+++.++++||+|.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888888899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEe
Q 005879 408 DKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487 (672)
Q Consensus 408 ~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i 487 (672)
.||....+.+++|+++..+||+|+.|++.|+.+.+.++..++.+++|+++|+|.+++|++..++...+....+++|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 488 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
-+-||+|.++.++|++....|++|.|+|||....++..++++|+..+.++...+.|...++.+...+.++++++.+-|+.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHH
Q 005879 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~ 647 (672)
+.|+||..+|+.||.+++.++|+|||.||+|+||.||+|||+.++++.++.++|+|++.+.++.+..++..+|.+|++++
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHH
Q 005879 648 NYTIYAVSITIRIVVSG 664 (672)
Q Consensus 648 ~~i~~~~~~n~~~~~~~ 664 (672)
.+..|+++..+.+++.+
T Consensus 648 nytiyavsitiriv~gf 664 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGF 664 (942)
T ss_pred hheeeeehhHHHHHHHH
Confidence 99999998887765443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-111 Score=976.96 Aligned_cols=640 Identities=30% Similarity=0.472 Sum_probs=554.8
Q ss_pred cccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----C
Q 005879 17 DLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANG----G 91 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~ 91 (672)
..|..+++++++.|+++.+|||++|+++|+++||+|+++.++ +++|..|+++|++|+.|+++++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 578899999999999999999999999999999999999876 55778899999999999999999999987532 1
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC------CeEEEEeCCCCCCCcEEEEcCCCe
Q 005879 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGDI 165 (672)
Q Consensus 92 ~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiI~l~~G~~ 165 (672)
+....|.+++.|+++++++.+++++++++++++.++|+++.+++++|+|| |++++|++++|+|||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 22347888999999999999999999999999999999999999999999 489999999999999999999999
Q ss_pred ecccEEEEecCCeEEeccCcCCCCcccccCC-----------------------CCcceeceeeeeCceEEEEEEecccc
Q 005879 166 IPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDGVYSGSTCKQGEIEAVVIATGVHT 222 (672)
Q Consensus 166 iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~-----------------------~~~v~aGt~v~~g~~~~~V~~tG~~T 222 (672)
|||||+|++|+++.||||+|||||.|+.|.+ +|.+|+||.+.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999888899999999999999975 36899999999999999999999999
Q ss_pred cchhhhhhhcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHH
Q 005879 223 FFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (672)
Q Consensus 223 ~~g~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~ 302 (672)
++|++.+++.+.+.++++++.++++.+++..+..+++.+.+++.+ ....+|..++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~-~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING-FTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 999999998776667889998888877654332222222222211 2334677788888999999999999999999999
Q ss_pred HHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHccc--ccccchHHH
Q 005879 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR--TENQDAIDA 380 (672)
Q Consensus 303 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 380 (672)
.++.+|+++|+++|++.++|+||++|+||||||||||+|+|++.+.+ . ..+.+.++++.+++..+. ...+||++.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~-~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--D-VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--c-CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 99999999999999999999999999999999999999999998743 1 123334556665544322 224689999
Q ss_pred HHHhhcCChH--HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHHH
Q 005879 381 AIVGMLADPK--EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN----------KSDIERRVH 448 (672)
Q Consensus 381 ai~~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~ 448 (672)
|++.+..... .....++.++.+||++.+++|++++...+|+++.++||+||.++++|+. +.+.++.+.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 9998764321 1234578889999999999999988766788899999999999999963 123456677
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCC-----CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH
Q 005879 449 AVIDKFAERGLRSLAVAYQEVPEGRK-----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 523 (672)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~l~~~~~-----~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~ 523 (672)
+..+.++++|+|++++||++++..+. +..|.+++|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 88899999999999999998765431 2357889999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhC
Q 005879 524 ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 524 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 603 (672)
++|+++||.. ..++.|.+++ .+++.++.+.+++.++|+|++|+||.++|+.||++|++|+|+|||.||+|||++|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 3567787776 4677788899999999999999999999999999999999999999999999999
Q ss_pred CeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005879 604 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 604 ~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|||||||+|+|.||++||+|+++++|+.|++++++||++|+||+|++.|.++.|+..++.++
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~ 718 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVL 718 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987755543
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-112 Score=989.36 Aligned_cols=645 Identities=35% Similarity=0.541 Sum_probs=565.4
Q ss_pred cccccCCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 005879 15 TVDLENIPIE--EVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANG 90 (672)
Q Consensus 15 ~~~~~~~~~~--~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 90 (672)
...||..+.+ ++...+.++ ..||+++|+.+|++.||.|+++..+ .+.|..|+.+|++|+.++++++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 3468888888 999999887 7899999999999999999999655 577889999999999999999999999885
Q ss_pred CCCCCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 005879 91 GGKPPDW----QDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (672)
Q Consensus 91 ~~~~~~~----~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~i 166 (672)
.| .++..|+++++++.++.++|++++++++++++++.+++++|+|||++++|+++||||||||.|++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 44 455678888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEecCCeEEeccCcCCCCcccccCC--------------CCcceeceeeeeCceEEEEEEecccccchhhhhhhc
Q 005879 167 PADARLLEGDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 232 (672)
Q Consensus 167 PaD~~ll~g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 232 (672)
|||++|+++++++||||+|||||.|+.|.+ .|++|+||.+.+|.+.++|++||++|+.|++.+++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999998999999999999999963 478999999999999999999999999999999998
Q ss_pred cc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhC
Q 005879 233 TT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 311 (672)
Q Consensus 233 ~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~ 311 (672)
.. ...+++++.+++++.+++.+.++..++.+++.++.....|...+..+++++++++|++||+.++++++.++.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 78899999999999887655554444444444333233478889999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCC------h---HHHHHHHHHccc--cc------c
Q 005879 312 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD------A---DTVVLMAAQASR--TE------N 374 (672)
Q Consensus 312 ~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~---~~~~~~~~~~~~--~~------~ 374 (672)
++++|+++++|+||++++||||||||||+|+|+|.+++...-..+.+ . ..++..++.++. .. .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999977542011122 1 113333333332 12 4
Q ss_pred cchHHHHHHhhcCC------hHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC-------Ch
Q 005879 375 QDAIDAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN-------KS 441 (672)
Q Consensus 375 ~~~~~~ai~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~-------~~ 441 (672)
+||.|.|++.+..+ ....+..+++++.+||+|.+|||+++++..+++++.++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 68999999987643 333445567899999999999999999877777999999999999999974 34
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC----CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCC
Q 005879 442 DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD 517 (672)
Q Consensus 442 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~----~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd 517 (672)
+.++.+.+..++|+++|+||+++|||.++..+. +..|++|+|+|+++|+||+|++++++|+.|+++||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 667889999999999999999999998766544 5789999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCH
Q 005879 518 QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDA 597 (672)
Q Consensus 518 ~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~ 597 (672)
++.||.++|+++|+..+.....++.|.+++. +.+.++.+.++++.||||++|+||.++|+.||++|+.|+|+|||.||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 9999999999999876533345778888773 555688888899999999999999999999999999999999999999
Q ss_pred HHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 005879 598 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLD 667 (672)
Q Consensus 598 ~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 667 (672)
||||+|||||||| +|+|++|++||+++.++++..+..++++||++|.|+++++.|.+++|+..++.++++
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~ 722 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY 722 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 799999999999999999999999999999999999999999999999975555443
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-111 Score=987.09 Aligned_cols=641 Identities=29% Similarity=0.433 Sum_probs=545.4
Q ss_pred cccccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 005879 15 TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGG 92 (672)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 92 (672)
-.+||..+++++.+.|+++ .+|||++|+++|+++||.|+++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3489999999999999998 6899999999999999999999876 567789999999999999999999999874
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEE
Q 005879 93 KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARL 172 (672)
Q Consensus 93 ~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~l 172 (672)
+|.+++.|+++++++.++.++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEeccCcCCCCcccccCCC---------------CcceeceeeeeCceEEEEEEecccccchhhhhhhcccC--
Q 005879 173 LEGDPLKIDQSALTGESLPVTKGPG---------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-- 235 (672)
Q Consensus 173 l~g~~l~Vdes~LTGEs~pv~k~~~---------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-- 235 (672)
++++.|.||||+|||||.|+.|.+. |++|+||.|.+|++.++|++||.+|++|++.+++.+..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999642 57899999999999999999999999999998875421
Q ss_pred ----------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHH
Q 005879 236 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNL 281 (672)
Q Consensus 236 ----------------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (672)
.++|+++.++++++++..+.++++++.++..+ . ..+...+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHHH
Confidence 13889999999988755433333332222211 1 1123455667
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEe---c--c--
Q 005879 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV---F--T-- 354 (672)
Q Consensus 282 ~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~---~--~-- 354 (672)
++++++++|++||++++++++++++||++++++||++.++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 88999999999999999999999999999999999999999999999999999999999999998765421 0 0
Q ss_pred -cCC---------------------------------------C------h---HHHHHHHHHcccc------------c
Q 005879 355 -KGV---------------------------------------D------A---DTVVLMAAQASRT------------E 373 (672)
Q Consensus 355 -~~~---------------------------------------~------~---~~~~~~~~~~~~~------------~ 373 (672)
.++ + . ..++..++.++.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 000 0 0 1233334443311 1
Q ss_pred ccchHHHHHHhhcCChH----------HH-------------------hcccceEEEecCCCCCceEEEEEEeCCC-eEE
Q 005879 374 NQDAIDAAIVGMLADPK----------EA-------------------RAGIQEVHFLPFNPTDKRTALTYIDNAG-KMH 423 (672)
Q Consensus 374 ~~~~~~~ai~~~~~~~~----------~~-------------------~~~~~~~~~~~f~~~~~~~~v~~~~~~~-~~~ 423 (672)
.++|.|.|++.++.... .. +..++.+..+||+|++|||++++...++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 25899999987642110 11 1246789999999999999999876544 578
Q ss_pred EEEcCcHHHHHHhccCC------------hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC------------CCCCCC
Q 005879 424 RVSKGAPEQILNLAHNK------------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR------------KDSPGG 479 (672)
Q Consensus 424 ~~~KGa~e~i~~~~~~~------------~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~------------~~~~e~ 479 (672)
+|+|||||.|+++|+.. ++.++.+.+..++|+++|+||+++|||.++..+ ++..|.
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 99999999999999631 234677888899999999999999999886532 234578
Q ss_pred CeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--------CCcccccccccccCC
Q 005879 480 PWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSALLGQDKDESIA 551 (672)
Q Consensus 480 ~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--------~~~~~~~~~~~~~~~ 551 (672)
+|+|+|+++++||+|++++++|+.|+++||+++|+|||++.+|.++|+++||..+.. ...+++|.+++ .++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-ALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hcC
Confidence 999999999999999999999999999999999999999999999999999964311 23567777665 355
Q ss_pred CccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChh
Q 005879 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (672)
Q Consensus 552 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~ 630 (672)
..++.+..+...+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.|||||||| +|++.++++||+++++++|.
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 66777888888899999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 631 ~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
.|.+++++||++|+|+++++.|.+++|+..++.+++
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999999999988665544
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-110 Score=970.69 Aligned_cols=634 Identities=29% Similarity=0.461 Sum_probs=555.1
Q ss_pred cccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005879 17 DLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 95 (672)
..|..+.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++|++++++++++++.
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 4588999999999999999999999999999999999998775 56778999999999999999999999874
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE------CCeEEEEeCCCCCCCcEEEEcCCCeeccc
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR------DGRWNEQDASILVPGDIISIKLGDIIPAD 169 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r------~g~~~~i~~~~L~~GDiI~l~~G~~iPaD 169 (672)
.|.+++.|+++++++.++++++|++++++.++|+++.+++++|+| ||++++|+++||+|||+|.|++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 788888999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred EEEEecCCeEEeccCcCCCCcccccCCCC-------------cceeceeeeeCceEEEEEEecccccchhhhhhhcccCC
Q 005879 170 ARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ 236 (672)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 236 (672)
|+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+||+.+++.+.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999988899999999999999998864 69999999999999999999999999999999887766
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCccc
Q 005879 237 VGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (672)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk 316 (672)
++++++.++++++++..+.++.+.+.+++ +.+...+|..++..++++++++|||+||++++++++.++.+|+++|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMI-NGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheeh-HHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 78999999999888655444333333322 22233466777888899999999999999999999999999999999999
Q ss_pred chhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--HHH
Q 005879 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--KEA 392 (672)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 392 (672)
++.++|+||++|+||||||||||+|+|++.+.. . ..+.+.++++.+++..+.. ...||++.|++.+.... ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 999999999999999999999999999998742 1 1233455566655543332 23589999998876432 122
Q ss_pred hcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeEE
Q 005879 393 RAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLRSL 462 (672)
Q Consensus 393 ~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r~l 462 (672)
+..++.++.+||+|++|+|++++.+.++..+.++||+||.++++|+.. ++.++++.+.++.++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 346788899999999999999887655667889999999999999642 2345677888899999999999
Q ss_pred EEEeeecCCCCC---CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc
Q 005879 463 AVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 539 (672)
Q Consensus 463 ~~a~~~l~~~~~---~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 539 (672)
++||++++..+. +..|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.++|+++||.. ..
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----ND 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CC
Confidence 999998865432 12477899999999999999999999999999999999999999999999999999963 34
Q ss_pred ccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhc
Q 005879 540 ALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 619 (672)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ 619 (672)
++.|.+++ .++..++.+.+++.++|+|++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+|.||++
T Consensus 559 v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred eeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 67777665 35667788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 620 ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
||+|+++++|+.++.++++||++|+||+|++.|.++.|+..++.+++
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~ 684 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLV 684 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999988665544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-108 Score=961.38 Aligned_cols=650 Identities=25% Similarity=0.389 Sum_probs=549.5
Q ss_pred cccccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-
Q 005879 15 TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGG- 91 (672)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 91 (672)
..+||..+.+++++.|+++ .+|||++|+++|+++||+|+++++++ ++|..|+++|++|++++++++++++++.....
T Consensus 14 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~ 93 (997)
T TIGR01106 14 EMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQA 93 (997)
T ss_pred cCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 4579999999999999998 67999999999999999999988664 46778999999999999999999987753211
Q ss_pred -----CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 005879 92 -----GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (672)
Q Consensus 92 -----~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~i 166 (672)
.....|++++++++++++++++++++++++++.++++++..+++++|+|||++++|++++|+|||+|.|++||+|
T Consensus 94 ~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 94 STEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEE
Confidence 122468888888899999999999999999999999998889999999999999999999999999999999999
Q ss_pred cccEEEEecCCeEEeccCcCCCCcccccCCCC----------cceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005879 167 PADARLLEGDPLKIDQSALTGESLPVTKGPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 167 PaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
||||++++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++.+. .
T Consensus 174 PaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 174 PADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 99999999987799999999999999998864 699999999999999999999999999999988765 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005879 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.++++.+++..+.++..++.+++ +...+..|...+..++++++++|||+||++++++++.++.+|+++|+++
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilv 332 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 332 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEe
Confidence 678999999998887654443333332222 2233456667777888899999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEec--c-c--------CCCh-----HHHHHHHHHcccc-------
Q 005879 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF--T-K--------GVDA-----DTVVLMAAQASRT------- 372 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--~-~--------~~~~-----~~~~~~~~~~~~~------- 372 (672)
|+++++|+||++++||||||||||+|+|+|.++++... . . ..+. +.++..++.++..
T Consensus 333 k~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~ 412 (997)
T TIGR01106 333 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQE 412 (997)
T ss_pred cCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccC
Confidence 99999999999999999999999999999988654210 0 0 0111 1344444444211
Q ss_pred --------cccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeC---CCeEEEEEcCcHHHHHHhc
Q 005879 373 --------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRVSKGAPEQILNLA 437 (672)
Q Consensus 373 --------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~~~~~~~~KGa~e~i~~~~ 437 (672)
..++|.|.|++.++. +....+..++.++.+||+|++|||++++... ++++++++|||||.|+++|
T Consensus 413 ~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 125789999988753 2334456788899999999999998877532 2467899999999999999
Q ss_pred cC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC--------C---CCCCCeEEEEEeeccCCCCcc
Q 005879 438 HN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK--------D---SPGGPWQFMGLMPLFDPPRHD 496 (672)
Q Consensus 438 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~--------~---~~e~~l~~lG~i~~~d~~r~~ 496 (672)
+. +++.++.+.+..++|+++|+||+++||+.++.++. + ..|++|+|+|+++++||+|++
T Consensus 493 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 493 SSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred hHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 63 12456778888999999999999999998865321 1 127899999999999999999
Q ss_pred hHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CcccccccccccCCCcc
Q 005879 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLGQDKDESIAALP 554 (672)
Q Consensus 497 ~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~~~~~~~~~~~~ 554 (672)
++++|++|+++||+++|+|||++.+|.++|+++|+..+... ..++.|.+++. +...+
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~e 651 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQ 651 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHH
Confidence 99999999999999999999999999999999999643210 13566666653 45556
Q ss_pred HHHHhhccC--eecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhH
Q 005879 555 IDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 631 (672)
Q Consensus 555 ~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~ 631 (672)
+++.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.+|++||+++++++|+.
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 777777665 99999999999999999999999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 632 IISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 632 i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
+++++++||++|.|+++++.|.++.|+..++..++
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~ 766 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLI 766 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999999999999999988665544
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-107 Score=957.83 Aligned_cols=642 Identities=25% Similarity=0.413 Sum_probs=542.8
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 005879 22 PIEEVFENLRCS-REGLS--SQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (672)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~--~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~ 91 (672)
+.+++++.|+++ .+||| ++|+++|+++||+|+++.+++ ++|..|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999 67999 999999999999999998876 5567889999999999999999999987532 2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccE
Q 005879 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMAR-LAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (672)
Q Consensus 92 ~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~ 170 (672)
++...|++++.++++++++.++.++++++++++.+++++. .+++++|+|||++++|++++|+|||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3334789998888888999999999999999999998764 467899999999999999999999999999999999999
Q ss_pred EEEecCCeEEeccCcCCCCcccccCCCCc--ceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHHH
Q 005879 171 RLLEGDPLKIDQSALTGESLPVTKGPGDG--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (672)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (672)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+||+.+++..+.+++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999667999999999999999998765 9999999999999999999999999999999887766779999999888
Q ss_pred HHHHHHHHHHHHHHHHHH---hhcc---C---------ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCC
Q 005879 249 NFCICSIAVGMIVEIIVM---YPIQ---D---------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (672)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~i 313 (672)
+++..+.++.+++.++++ +... . .++...+..++++++++|||+||++++++++.++.+|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 775433222222212111 1111 1 134556777888999999999999999999999999999999
Q ss_pred cccchhhhhhhcCccEEEeeccccccCCccccccceEEecc---cC----CC--hHHHHHHHHHcc-cc-----------
Q 005879 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT---KG----VD--ADTVVLMAAQAS-RT----------- 372 (672)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---~~----~~--~~~~~~~~~~~~-~~----------- 372 (672)
++|+++++|+||++|+||||||||||+|+|++.+++..... .+ .. ..+++..+..++ ..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999886542210 00 00 112222222221 11
Q ss_pred cccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC--------
Q 005879 373 ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-------- 440 (672)
Q Consensus 373 ~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~-------- 440 (672)
..+||+|.|++.++. +....+..++.++.+||++++++|++++...+++++.++|||||.+++.|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125789999988753 22233445677888999999999999988767778999999999999999641
Q ss_pred --hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEc
Q 005879 441 --SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (672)
Q Consensus 441 --~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~---~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~T 515 (672)
.+.++.+.+.+++|+++|+|++++||+.++.++. +..|++|+|+|+++++||+||+++++|+.|+++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235678888999999999999999999865432 23478999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCcc
Q 005879 516 GDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (672)
Q Consensus 516 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~N 595 (672)
||++.+|.++|+++||..+ +..++.|.+++. +...++.+.+++..+|+|++|+||.++|+.||++|++|+|+|||.|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999743 235677777653 5667788888899999999999999999999999999999999999
Q ss_pred CHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 596 D~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
|+|||++|||||||| +|+|.|+++||+++++++|..+++++++||++|+|+++++.|++++|+..++..++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~ 751 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 751 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999999999999988666554
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-109 Score=883.41 Aligned_cols=645 Identities=26% Similarity=0.402 Sum_probs=540.1
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCccCcccchHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCC
Q 005879 22 PIEEVFENLRCS-REGLSS--QAAEERLSIFGYNKLEEKKESKFL-KFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPD 96 (672)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~~--~~~~~r~~~~G~N~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 96 (672)
..+++++.|+++ ..|++. ++..+|++.||.|.+++++++.|+ ..|+.+.+.-..++.+++++++.++++. +....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 589999999999 789986 899999999999999998877665 5678888888889999999999988754 44679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005879 97 WQDFVGIITLLVINSTISFIEENNAGNAAAALMARL-APKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 97 ~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
|++++.|++.+++..++..+.+|+.+++.+.|++.. ..+..|+|||+.++|+.-||+||||+.|+.||.+||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 999999988776666677777777777777766432 3468899999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCC--CCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHH
Q 005879 176 DPLKIDQSALTGESLPVTKGP--GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCI 252 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~--~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~ 252 (672)
+.|.+|||++||||.++.|.+ +.++++||++.+|+++++|+++|.+|..|+++.++... ..++++|-++++++...-
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 56899999999999999999999999999999888777 478899988887764421
Q ss_pred ---HHHHHHHHHHHHHHhhccC-----c---cccc--------hhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCC
Q 005879 253 ---CSIAVGMIVEIIVMYPIQD-----R---EYRP--------GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (672)
Q Consensus 253 ---~~~~~~~~~~~~~~~~~~~-----~---~~~~--------~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~i 313 (672)
+.++...++.++..|+... . .+.. .+...+.++++++|+|||+++++++++++++|.+++.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1111111222222332211 1 1111 1122234577899999999999999999999999999
Q ss_pred cccchhhhhhhcCccEEEeeccccccCCccccccceEEecccC--------CChHH--HHHHH-HHcc------------
Q 005879 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG--------VDADT--VVLMA-AQAS------------ 370 (672)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------~~~~~--~~~~~-~~~~------------ 370 (672)
++|+.+++|+||.+++||+|||||||.|+|++.+.++....+. .++.. ++... +..+
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999988665332211 22221 11111 1111
Q ss_pred -cccccchHHHHHHhhc----CChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC------
Q 005879 371 -RTENQDAIDAAIVGML----ADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN------ 439 (672)
Q Consensus 371 -~~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~------ 439 (672)
....++|.+.|++++. .+....|.....++.+||+|.+|+|++++..+++..|.|+|||+|.++..|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 0112478999998774 35556677889999999999999999999877666349999999999999975
Q ss_pred -----ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC-----C---CCCCCCCeEEEEEeeccCCCCcchHHHHHHHHh
Q 005879 440 -----KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG-----R---KDSPGGPWQFMGLMPLFDPPRHDSAETIRRALN 506 (672)
Q Consensus 440 -----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~-----~---~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~ 506 (672)
.++....+++.++.|+.+|+|++|+||++..+. + .+..+.+|+++|+++++||+||++++||+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 234456889999999999999999999985332 1 134578899999999999999999999999999
Q ss_pred CCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCE
Q 005879 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586 (672)
Q Consensus 507 ~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~ 586 (672)
+||.|.|+|||+..||++||.+|||..+..+-.++.|.++. .++++++++++.+..|+||.+|.+|..+|+.|++.|++
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 99999999999999999999999998876666788898887 57888999999999999999999999999999999999
Q ss_pred EEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005879 587 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 587 v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|+++|||.||+|||+.||||.||| .|++.|||+||+|++||||++|+++++|||++|.||+||++|++++|+..++..|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999999877665
Q ss_pred hc
Q 005879 666 LD 667 (672)
Q Consensus 666 ~~ 667 (672)
.+
T Consensus 821 v~ 822 (1034)
T KOG0204|consen 821 VS 822 (1034)
T ss_pred hh
Confidence 54
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-106 Score=944.68 Aligned_cols=631 Identities=30% Similarity=0.479 Sum_probs=546.7
Q ss_pred ccccCCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCccCccc-chHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 005879 16 VDLENIPIEEVFENLRCS-REGLS-SQAAEERLSIFGYNKLEEKK-ESKFLKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (672)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~-~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~ 91 (672)
.+||.+|++++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|..|+++| ++|+.++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 479999999999999999 67999 99999999999999999876 56677899999 8999999999999999874
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEE
Q 005879 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (672)
Q Consensus 92 ~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ 171 (672)
.|.+++.++++++++..+++++++++++++++|+++.+++++|+|||++++|+++||+|||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 7888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEeccCcCCCCcccccCCCC--------------cceeceeeeeCceEEEEEEecccccchhhhhhhccc-CC
Q 005879 172 LLEGDPLKIDQSALTGESLPVTKGPGD--------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQ 236 (672)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~~--------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~ 236 (672)
|++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.++++++ .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999987799999999999999998863 799999999999999999999999999999998876 56
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCccc
Q 005879 237 VGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (672)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk 316 (672)
++++++.++++++++..+.++.+++.+++.|. .+.+|...+...+++++++|||+||++++++++.+.+||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 78999999999987654433333333333332 34567778888899999999999999999999999999999999999
Q ss_pred chhhhhhhcCccEEEeeccccccCCccccccceEEecc----cC--C-----------------C--hHHHHHHHHHccc
Q 005879 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT----KG--V-----------------D--ADTVVLMAAQASR 371 (672)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~----~~--~-----------------~--~~~~~~~~~~~~~ 371 (672)
++.++|+||++|+||||||||||+|+|++.+++..... .. . + ..+++..++.++.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 99999999999999999999999999999876531100 00 0 0 1223334433332
Q ss_pred c--------cccchHHHHHHhhcCCh--HHHhcccceEEEecCCCCCceEEEEEEe-CCCeEEEEEcCcHHHHHHhccCC
Q 005879 372 T--------ENQDAIDAAIVGMLADP--KEARAGIQEVHFLPFNPTDKRTALTYID-NAGKMHRVSKGAPEQILNLAHNK 440 (672)
Q Consensus 372 ~--------~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~~f~~~~~~~~v~~~~-~~~~~~~~~KGa~e~i~~~~~~~ 440 (672)
. ..+||+|.|++.++... ...+..++.++.+||+|.+|||++.+.. .+++++.++||+||.++..|+..
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 1 12479999998875422 2233467889999999999999998775 35678899999999999999631
Q ss_pred -----------hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCC
Q 005879 441 -----------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV 509 (672)
Q Consensus 441 -----------~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi 509 (672)
++.++.+.+..++++++|+|++++||+++ +.+|+|+|+++++||+||+++++|+.|+++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 23456778888999999999999999975 45789999999999999999999999999999
Q ss_pred cEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEE
Q 005879 510 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (672)
Q Consensus 510 ~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~ 589 (672)
+++|+|||++.+|.++|+++|+... ....+.|.+++ .++..++.+.+.+..+|+|++|+||..+|+.+|+.|+.|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999753 23456666665 35667788888999999999999999999999999999999
Q ss_pred ECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005879 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 590 iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
+|||.||+|||++|||||||| +|++.++++||+++++++++.+.+++++||++|+|+++++.|+++.|+..+..++
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~ 699 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIA 699 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999999999999999999999 7999999999999999999999999999999999999999999999998865543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-102 Score=917.95 Aligned_cols=620 Identities=23% Similarity=0.291 Sum_probs=508.7
Q ss_pred CCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005879 34 REGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (672)
Q Consensus 34 ~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~ 113 (672)
..|||++|+++|+++||+|+++.+.++++..|++++++|++++++++++++++. .+|++++.++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998888888999999999988877776555543 3788888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEc--CCCeecccEEEEecCCeEEeccCcCCCCcc
Q 005879 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (672)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~--~G~~iPaD~~ll~g~~l~Vdes~LTGEs~p 191 (672)
..++++++.++++++. ..++.++|+|||+|++|+++||+|||+|.|+ +|++|||||+|++|++ .||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~-~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~~-~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMV-HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSC-IVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhh-cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCcE-EEecccccCCccc
Confidence 9999999988888854 4577899999999999999999999999999 9999999999999985 8999999999999
Q ss_pred cccCCC------------------Ccceeceeeee-------CceEEEEEEecccccchhhhhhhccc-CCCChHHHHHH
Q 005879 192 VTKGPG------------------DGVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLT 245 (672)
Q Consensus 192 v~k~~~------------------~~v~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~ 245 (672)
+.|.+. +++|+||.+.+ |.+.++|++||.+|..|++.+++..+ ...+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 35999999985 78999999999999999999988766 44567777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhc
Q 005879 246 AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (672)
Q Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg 325 (672)
++..+++.+.+++++. +++.+...+.++...+..++.++++++|++||++++++++.+..||+++|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 6655443322222222 122222334567778889999999999999999999999999999999999999999999999
Q ss_pred CccEEEeeccccccCCccccccceEEecccC----------CChHHHHHHHHHccc------ccccchHHHHHHhhcCCh
Q 005879 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----------VDADTVVLMAAQASR------TENQDAIDAAIVGMLADP 389 (672)
Q Consensus 326 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~------~~~~~~~~~ai~~~~~~~ 389 (672)
++|++|||||||||+|+|+|.++........ .....+....+.+.. ...+||+|.|++.+....
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999987543111000 011112222222221 123789999999875311
Q ss_pred HHH-------------------hcccceEEEecCCCCCceEEEEEEeC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHH
Q 005879 390 KEA-------------------RAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHA 449 (672)
Q Consensus 390 ~~~-------------------~~~~~~~~~~~f~~~~~~~~v~~~~~-~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~ 449 (672)
... ...+++++.+||+|++|||+++++.. ++++++++|||||.|+++|+.. +.++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 000 13577889999999999999998864 3567899999999999999853 45788999
Q ss_pred HHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHH
Q 005879 450 VIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (672)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~l~~~--------~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 521 (672)
.+++|+++|+||+++|||++++. +++..|.+|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2345789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------Ccccccccccc--
Q 005879 522 GKETGRRLGMGTNMYP---------------------------------------------------SSALLGQDKDE-- 548 (672)
Q Consensus 522 a~~ia~~~gi~~~~~~---------------------------------------------------~~~~~~~~~~~-- 548 (672)
|.++|+++||..+... ..+++|+.++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 01122222211
Q ss_pred cCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCC
Q 005879 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (672)
Q Consensus 549 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~ 628 (672)
.....++.+++.+..||||++|+||.++|+.||+.|+.|+|||||.||+||||+||||||||++ | |..+||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCc
Confidence 0122346667788899999999999999999999999999999999999999999999999975 3 4479999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 629 ~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
++++..+|++||+++.|+++.+.|.+.+++...+..++
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~ 881 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI 881 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887655543
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-98 Score=876.35 Aligned_cols=600 Identities=31% Similarity=0.455 Sum_probs=499.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC
Q 005879 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD 141 (672)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~ 141 (672)
++++|++|++++|+++++++++++... .....|.+++.|+++++++..+++++++++++++++|.+..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986432 22347999999999999999999999999999999999888899999999
Q ss_pred CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCC-------------Ccceeceeeee
Q 005879 142 GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DGVYSGSTCKQ 208 (672)
Q Consensus 142 g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~v~~ 208 (672)
|++++|+++||||||+|.|++||.|||||+|++|+.+.||||+|||||.|+.|.++ +.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998789999999999999999875 78999999999
Q ss_pred CceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cc----Ccccc----chh
Q 005879 209 GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYP-IQ----DREYR----PGI 278 (672)
Q Consensus 209 g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~----~~~ 278 (672)
|+++++|++||.+|++||+.+++..+ .+++++++.+++++.++..++++.+++.+++.+. +. ..+|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999888776 5678999999999877654333332222222111 11 11221 123
Q ss_pred hHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEec-----
Q 005879 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF----- 353 (672)
Q Consensus 279 ~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----- 353 (672)
...+++++++||++||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 345678899999999999999999999999999999999999999999999999999999999999987653210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHcccc------------cccchHHHHHHhhcCChH------
Q 005879 354 ------TKGVD-------------------ADTVVLMAAQASRT------------ENQDAIDAAIVGMLADPK------ 390 (672)
Q Consensus 354 ------~~~~~-------------------~~~~~~~~~~~~~~------------~~~~~~~~ai~~~~~~~~------ 390 (672)
..+++ .+.++..++.++.. ..++|.|.|++.+..+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 11233333333321 125899999987642110
Q ss_pred --------------HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC-----------ChHHHH
Q 005879 391 --------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN-----------KSDIER 445 (672)
Q Consensus 391 --------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~-----------~~~~~~ 445 (672)
..+..++.++.+||+|++|||++++.. ++++++|+|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123456789999999999999998875 467889999999999999964 123466
Q ss_pred HHHHHHHHHHH-cCCeEEEEEeeecCCCC----------CCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEE
Q 005879 446 RVHAVIDKFAE-RGLRSLAVAYQEVPEGR----------KDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (672)
Q Consensus 446 ~~~~~~~~~~~-~G~r~l~~a~~~l~~~~----------~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~ 514 (672)
++.+.+++|++ +|+||+++|||.++.++ ++..|++|+|+|+++++||+|++++++|+.|+++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHhCCCCCCC--CCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECC
Q 005879 515 TGDQLAIGKETGRRLGMGTNMY--PSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (672)
Q Consensus 515 TGd~~~~a~~ia~~~gi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGD 592 (672)
|||+..+|.++|+++|+..+.. ....+.|.+++ .+.+.+......+..+|+|++|+||.++|+.+|+.|+.|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~-~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-EMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHh-hCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 9999999999999999975321 12345565554 34445566667778899999999999999999999999999999
Q ss_pred CccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 593 g~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
|.||+|||++||||||||+|++.+|++||+++.+++|+.+.+++++||++|+|+++++.|.+++|+..++..++
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~ 712 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFL 712 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988666554
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-96 Score=779.77 Aligned_cols=664 Identities=26% Similarity=0.413 Sum_probs=554.0
Q ss_pred ChhHHHHHhhcccc-cccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHH
Q 005879 3 DKEEVLEAVLKETV-DLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEA 79 (672)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (672)
++...++++++|.+ +.|++|.+|+.+++.++ .+|||.+++.+++.+.|+|.+++|+. +.|.+|.+|+++-+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 45678899999955 99999999999999999 89999999999999999999998874 45668999999999999999
Q ss_pred HHHHHHHHhcCC------CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCC
Q 005879 80 AAIMAIALANGG------GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILV 153 (672)
Q Consensus 80 ~~~l~~~~~~~~------~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~ 153 (672)
+++++++.+... .+....+.+..++.++++..+..++|+.+..+.++.+..+.|+.+.|+|||+...+..+|||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 999988764321 11222333444555667888899999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCC----------CCcceeceeeeeCceEEEEEEeccccc
Q 005879 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDGVYSGSTCKQGEIEAVVIATGVHTF 223 (672)
Q Consensus 154 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~----------~~~v~aGt~v~~g~~~~~V~~tG~~T~ 223 (672)
+||++.++-|++||||.+++++.++++|+|+|||||.|..+.+ .|+-|.+|.+++|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 9999999999999999999999999999999999999999976 367899999999999999999999999
Q ss_pred chhhhhhhcc-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHH
Q 005879 224 FGKAAHLVDT-TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (672)
Q Consensus 224 ~g~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~ 302 (672)
+|+++.+... ...++++++.+..+..+.....+ .+.+.++......++.|..++..++.++++.+|.+|+..++.++.
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi-~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAI-FLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHH-HHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999988765 36677888887777655332222 222222222222366777888788889999999999999999999
Q ss_pred HHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccC----------------CChHHHHHHH
Q 005879 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----------------VDADTVVLMA 366 (672)
Q Consensus 303 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------------~~~~~~~~~~ 366 (672)
...+||+++++++||..+.|+||..++||+|||||||+|.|+|.+.+.+..-.. .....+..++
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999988764321100 0112234444
Q ss_pred HHccc---------------ccccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeC---CCeEEE
Q 005879 367 AQASR---------------TENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHR 424 (672)
Q Consensus 367 ~~~~~---------------~~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~~~~~~ 424 (672)
..++. ...+++.+.|+.++.. +....|...+.+..+||+|.+|+.-.+.... +.+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 33332 1235778888887752 3356677888889999999999986655532 356788
Q ss_pred EEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCeEE
Q 005879 425 VSKGAPEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQF 483 (672)
Q Consensus 425 ~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-----------~~~e~~l~~ 483 (672)
..|||||.++++|+. +....+.+++...++...|.||++|+++.+++.++ ...-.+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 899999999999984 23567788888899999999999999999886542 123467899
Q ss_pred EEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC----------------------CCccc
Q 005879 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------------------PSSAL 541 (672)
Q Consensus 484 lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~----------------------~~~~~ 541 (672)
+|++++-||+|..+++|+..|+.+||+|+|+|||++.||+++|++.||..... ...++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 99999999999999999999999999999999999999999999999754211 11234
Q ss_pred ccccccccCCCccHHHHhhccC--eecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhh
Q 005879 542 LGQDKDESIAALPIDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 618 (672)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~ 618 (672)
.|.++. .++.+++++++++.. ||||.||+||..+|+.+|+.|..|+++|||.||+||||.|||||||| .|+|.+|+
T Consensus 662 hG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred eccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 555544 466778888888765 99999999999999999999999999999999999999999999999 89999999
Q ss_pred ccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcc
Q 005879 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLDF 668 (672)
Q Consensus 619 ~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 668 (672)
|||+|++|+||.+|+..+++||.+|+|+||.|.|.++.|++-+.++++.+
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi 790 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI 790 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH
Confidence 99999999999999999999999999999999999999999988776554
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-92 Score=777.55 Aligned_cols=542 Identities=24% Similarity=0.353 Sum_probs=438.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCC-ceE
Q 005879 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIITLLVINSTISFIE----ENNAGNAAAALMARLAP-KGK 137 (672)
Q Consensus 67 ~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~--~~~~~ii~~v~i~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~ 137 (672)
.++++|+.|+++++++++++++.... ....| ++.+.|.++++++.++..++ ++|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 56789999999999999998754211 00112 33445555555555554444 78999999999988876 675
Q ss_pred -EEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCC---CcceeceeeeeCceEE
Q 005879 138 -VLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEA 213 (672)
Q Consensus 138 -V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~---~~v~aGt~v~~g~~~~ 213 (672)
|.|||++++|++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|++| +.+|+||.+.+|.+.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7799999999999999999999999999999999999987 8999999999999999999 8899999999999999
Q ss_pred EEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCc
Q 005879 214 VVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIA 292 (672)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 292 (672)
+|+++|.+|++||+.++++.+ .++++++.....+...+.. +++++++ ++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~~-~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVIL-TMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHHH-HHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999887 5678887654444322211 1111111 11111 111123334566677888899999
Q ss_pred chHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccc
Q 005879 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT 372 (672)
Q Consensus 293 L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (672)
||..+++....++.||+|+|+++|+..++|++|++|++|||||||||+|++.+.+.. .. .+.+.++++..+..++.
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~- 339 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI- 339 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999999999999999999887765422 21 23445566666555543
Q ss_pred cccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHHHH
Q 005879 373 ENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVI 451 (672)
Q Consensus 373 ~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~ 451 (672)
.+.||++.|++.+....... ......+.+||++++++|++.+ +++ .+.||+++.++++|.... ..+..+.+..
T Consensus 340 ~s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 340 ADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred CCCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 44589999998875321100 0011234689999999998764 243 456999999999987421 2234566777
Q ss_pred HHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 005879 452 DKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (672)
Q Consensus 452 ~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi 531 (672)
++++++|+|+++++.. ++++|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++|+
T Consensus 414 ~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 8899999999998753 389999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005879 532 GTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
+ ++|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 5 3799999999999999999999999999999999999999999999999
Q ss_pred ccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005879 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 612 ~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
|+|.||++||+|++++|+..+.+++++||++|.|+++++.|+++.|+.-++..+
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~ 584 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAIL 584 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998755443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-89 Score=761.17 Aligned_cols=536 Identities=25% Similarity=0.332 Sum_probs=444.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ceEE
Q 005879 67 GFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAP-KGKV 138 (672)
Q Consensus 67 ~~~~~~~~~~~~~~~~l~~~~~~~~----~~---~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V 138 (672)
.+|++|+.+++++++++++++.... +. ...|...+.+++.++++.+++.++++|+++++++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 6788999999999999999876321 11 12233334445556777888889999999999999988775 6999
Q ss_pred EECCe-EEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCc---ceeceeeeeCceEEE
Q 005879 139 LRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIEAV 214 (672)
Q Consensus 139 ~r~g~-~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~~~ 214 (672)
+|||+ +++|++++|+|||+|.|++||+|||||+|++|.. .||||+|||||.|+.|++|+. ||+||.+.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 9999999999999999999999999999999985 899999999999999999988 999999999999999
Q ss_pred EEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcc
Q 005879 215 VIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAM 293 (672)
Q Consensus 215 V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L 293 (672)
|+++|.+|.+||+.++++++ .++++++...+.+..++..++++.++..+.+.++ .+.. ..+...+++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999887 5678888777666554433222222222222221 2222 367778899999999999
Q ss_pred hHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHccccc
Q 005879 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTE 373 (672)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (672)
+...++....++.||.++|+++|+.+++|+||++|++|||||||||+|+|.+.+.. .. .+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999997643 22 3456666776666655443
Q ss_pred ccchHHHHHHhhcCCh---HHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHHH
Q 005879 374 NQDAIDAAIVGMLADP---KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVHA 449 (672)
Q Consensus 374 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~ 449 (672)
.||.+.+++.++... ......++..+.+||++.++++++.+ +| ..+.||++|.+++.|... ...++++.+
T Consensus 342 -~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 -ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred -CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 469999998875431 11111234567889999888777643 24 467899999999998542 234567788
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 005879 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (672)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~ 529 (672)
..++++++|+|++++|++. +++|+++++|++||+++++|++||++||+++|+|||++.+|.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 530 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
|++ ++++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 995 36999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 005879 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (672)
Q Consensus 610 g~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~ 658 (672)
|+|+|.||++||+|++++|+..+.+++++||++.-.--....|+++..+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999987433344566665443
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=815.31 Aligned_cols=609 Identities=20% Similarity=0.259 Sum_probs=482.3
Q ss_pred cCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 49 FGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNA 124 (672)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~ 124 (672)
|..|.+.+.+|++| ..|++||.++.+++|++++++++++... +...+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s--~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS--PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC--CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999886 5789999999999999999999986432 22345566777888889999999999999998
Q ss_pred HHHHHHhcCCceEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCC----eEEeccCcCCCCcccccCCC--
Q 005879 125 AAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (672)
Q Consensus 125 ~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~~-- 197 (672)
.++. .++.++|+|+ |++++++|+||+|||+|.|++||+||||++|++++. ++||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 3578999997 899999999999999999999999999999998543 68999999999999988631
Q ss_pred ----------------------------------------------Ccceeceeeee-CceEEEEEEecccccchhhhhh
Q 005879 198 ----------------------------------------------DGVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (672)
Q Consensus 198 ----------------------------------------------~~v~aGt~v~~-g~~~~~V~~tG~~T~~g~i~~~ 230 (672)
|.+++||.+.+ |.++|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46789999998 899999999999998876322
Q ss_pred hcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----cccc---------------chhhHHHHHHHhhcCC
Q 005879 231 VDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQD----REYR---------------PGIDNLLVLLIGGIPI 291 (672)
Q Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~l~~~~P~ 291 (672)
....+.+++++.++++..+++.+.++.+++.+++...+.. ..|. ..+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2235678999999999877554433333333332211111 0121 1455677888999999
Q ss_pred cchHHHHHHHHHHH------HHHhhC----CCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccC-----
Q 005879 292 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----- 356 (672)
Q Consensus 292 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----- 356 (672)
+||+.+++++..++ .+|.++ ++.+|+.+.+|+||++++||+|||||||+|+|++.++.+.....+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 778764 599999999999999999999999999999999998765321000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHccc-------c-------cccchH
Q 005879 357 --------V--------------------D----------------ADTVVLMAAQASR-------T-------ENQDAI 378 (672)
Q Consensus 357 --------~--------------------~----------------~~~~~~~~~~~~~-------~-------~~~~~~ 378 (672)
. + ..+++..++.+.. . ...+|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 0112222222211 1 135799
Q ss_pred HHHHHhhcCChH------------------HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC-
Q 005879 379 DAAIVGMLADPK------------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN- 439 (672)
Q Consensus 379 ~~ai~~~~~~~~------------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~- 439 (672)
|.|++.++...+ .....+++++.+||+|+||||+++++++++++++++||||+.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999987642211 0123578889999999999999999988888999999999999999975
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCeEEEEEeeccCCCC
Q 005879 440 KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPR 494 (672)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-------------------------~~~e~~l~~lG~i~~~d~~r 494 (672)
.++.++.+.+++++|+.+|+||+++|||.+++++. +..|++|+|+|+++++||+|
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 33457788999999999999999999999876431 34689999999999999999
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC------------------------------------
Q 005879 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------------------------------ 538 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------------------------ 538 (672)
++++++|+.|+++||++||+|||+.+||.++|+++|+..+....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997542211
Q ss_pred ---cccccccccccCCCc---cHHHHhhccC--eecccChhhHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 539 ---SALLGQDKDESIAAL---PIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 539 ---~~~~~~~~~~~~~~~---~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
.++.|..++..++.. .+.++...++ |+||++|+||.++|+.+|+. |+.|+|+|||.||++||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 123333333222211 2333444555 99999999999999999998 99999999999999999999999988
Q ss_pred c-cccHHHhhccCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 610 A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 610 g-~~~~~~k~~ad~v~~~~~~~~i~~~i-~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
. .....|+.+||+++.+ |+.+.+++ .+||++|+|+++.+.|.++.|+.+++..++
T Consensus 794 ~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~ 850 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFW 850 (1057)
T ss_pred cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 2222578899999964 99999987 779999999999999999999988665543
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-88 Score=748.51 Aligned_cols=511 Identities=27% Similarity=0.401 Sum_probs=445.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE-CCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~ 174 (672)
+|.+...++++++++.+++.+...|+++++++|+++.|+++++++ ||++++||.++|+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 446677888888999999999999999999999999999997776 5558999999999999999999999999999999
Q ss_pred cCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHH
Q 005879 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (672)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (672)
|++ .||||+|||||.|+.|.+|+.|++||.+.+|....+|+++|.+|.+++|.++++++ .++++.|+++|+++.++++
T Consensus 253 G~s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 GSS-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred CcE-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 998 89999999999999999999999999999999999999999999999999999998 7789999999999999888
Q ss_pred HHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEee
Q 005879 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (672)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (672)
.++++.++.+++|++..+.+|..++..++++++++|||+|.+++|++...+..+.+++|+++|+..++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 66665555555555554467888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEE
Q 005879 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 334 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (672)
||||||+|++++.++. ... + ++++++.+++..+.. +.||++.|++.+..... ....+..+.+| .+ ++
T Consensus 412 KTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~-S~HPiA~AIv~~a~~~~--~~~~~~~~~i~---G~---Gv 478 (713)
T COG2217 412 KTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQH-SEHPLAKAIVKAAAERG--LPDVEDFEEIP---GR---GV 478 (713)
T ss_pred CCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhc-CCChHHHHHHHHHHhcC--CCCccceeeec---cC---cE
Confidence 9999999999998754 332 2 677888888777654 45699999998644321 11122222222 11 12
Q ss_pred EEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCC
Q 005879 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (672)
Q Consensus 414 ~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~ 493 (672)
.. .-+|+.+ .-|+++.+.+.-.. ... ..+..+.+..+|..++.++... +++|+++++|++
T Consensus 479 ~~-~v~g~~v--~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 479 EA-EVDGERV--LVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred EE-EECCEEE--EEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 11 1245444 44999988753211 111 5566788899999999999887 899999999999
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
||+++++|++||+.|++++|+|||+..+|.++|+++||+ ++++.+.|++|
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHH
Confidence 999999999999999999999999999999999999996 47999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 653 (672)
.++|+.||.+|++|+|+|||+||+|||.+||||||||.|+|.++++||+++++++++.++++++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhcccc
Q 005879 654 VSITIRIVVSGSLDFSN 670 (672)
Q Consensus 654 ~~~n~~~~~~~~~~~~~ 670 (672)
+.+|+.++...++++.+
T Consensus 669 ~~yn~~~iplA~~g~l~ 685 (713)
T COG2217 669 FGYNAIAIPLAAGGLLT 685 (713)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999999887654
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-88 Score=727.50 Aligned_cols=630 Identities=24% Similarity=0.327 Sum_probs=480.6
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHH
Q 005879 26 VFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIT 105 (672)
Q Consensus 26 ~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~ 105 (672)
..+......+||+.+++..|+..||+|.+..+.++.+..++++..+||. +|.+.+++.|... .+++++..|++
T Consensus 150 ~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfY-lFQ~fSv~lW~~d------~Y~~YA~cI~i 222 (1140)
T KOG0208|consen 150 WYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFY-LFQAFSVALWLAD------SYYYYAFCIVI 222 (1140)
T ss_pred hhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHH-HHHhHHhhhhhcc------cchhhhhHHHH
Confidence 3444445578999999999999999999999999999999999999994 5555555444432 24445555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcC-CCeecccEEEEecCCeEEeccC
Q 005879 106 LLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL-GDIIPADARLLEGDPLKIDQSA 184 (672)
Q Consensus 106 ~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~-G~~iPaD~~ll~g~~l~Vdes~ 184 (672)
+.+.+.....++.++.++.++.+ ......|+|+|||.|++|+++|||||||+.+.+ |-..|||++|++|+| .||||+
T Consensus 223 isv~Si~~sv~e~r~qs~rlr~m-v~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsm 300 (1140)
T KOG0208|consen 223 ISVYSIVLSVYETRKQSIRLRSM-VKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESM 300 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeeccc
Confidence 66777778888888888888774 355678999999999999999999999999999 999999999999998 599999
Q ss_pred cCCCCcccccCCC-------------------Ccceeceeeee------CceEEEEEEecccccchhhhhhhcccCCCCh
Q 005879 185 LTGESLPVTKGPG-------------------DGVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDTTNQVGH 239 (672)
Q Consensus 185 LTGEs~pv~k~~~-------------------~~v~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 239 (672)
|||||.|+.|.|- +.+|+||.+++ +.+.++|++||.+|..|++.|.+..+++ .+
T Consensus 301 LTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP-~~ 379 (1140)
T KOG0208|consen 301 LTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP-VN 379 (1140)
T ss_pred ccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC-cc
Confidence 9999999999872 57899999986 5699999999999999999988877743 33
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccc
Q 005879 240 FQKVLTAIGNF--CICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (672)
Q Consensus 240 ~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~ 317 (672)
++-.-|.+..+ +.++.+++++ ...+.+...+.+....+.+.+.++...+|+|||.+++++..++.+||.|+||+|.+
T Consensus 380 fkfyrds~~fi~~l~~ia~~gfi-y~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 380 FKFYRDSFKFILFLVIIALIGFI-YTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-HHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 44443433211 1111112222 22223334566777888899999999999999999999999999999999999999
Q ss_pred hhhhhhhcCccEEEeeccccccCCccccccceEEecc-----------------------cC-CChH-HHHH-HHHHcc-
Q 005879 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-----------------------KG-VDAD-TVVL-MAAQAS- 370 (672)
Q Consensus 318 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------------------~~-~~~~-~~~~-~~~~~~- 370 (672)
|+.+...|++|++|||||||||++.+.+-.+.....+ .+ ..+. .+.. ++.+.+
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999998654321000 00 0010 1111 111111
Q ss_pred ----cccccchHHHHHHhhcC------------------------ChHH--------Hh-cccceEEEecCCCCCceEEE
Q 005879 371 ----RTENQDAIDAAIVGMLA------------------------DPKE--------AR-AGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 371 ----~~~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~~~~~~f~~~~~~~~v 413 (672)
..-.+||+|..+.+... +|.. .. ..+.+++.+||+|..+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 11234666554432210 0100 01 14778999999999999999
Q ss_pred EEEeC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCeEEE
Q 005879 414 TYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFM 484 (672)
Q Consensus 414 ~~~~~-~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~--------~~~~~e~~l~~l 484 (672)
++..+ +.+.+.|+|||||.|.+.|+.. ..+.++++.++.|+.+|+|++|+|+|+++.. .++..|.+|+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p~-tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKPE-TVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCcc-cCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99854 5688999999999999999864 6788999999999999999999999999866 367889999999
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc------------------------c
Q 005879 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS------------------------A 540 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~------------------------~ 540 (672)
|++.+++++|++++.+|++|+++.|+++|+|||+..||..+||+||+..+..... .
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 9999999999999999999999999999999999999999999999965331100 0
Q ss_pred -----------------------------cccccccccC--CCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEE
Q 005879 541 -----------------------------LLGQDKDESI--AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (672)
Q Consensus 541 -----------------------------~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~ 589 (672)
+.|+.++-.. ..+.+++++.+..|||||+|.||..+|+.||+.|..|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 0000000000 112255567788899999999999999999999999999
Q ss_pred ECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHhcc
Q 005879 590 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI-VVSGSLDF 668 (672)
Q Consensus 590 iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~-~~~~~~~~ 668 (672)
||||+||+.|||+||+||+++++. |.-||.+.-.-.+.+.+...|++||...-.=-..+.|...+.+.. +..+++.+
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~ 935 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYL 935 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeee
Confidence 999999999999999999998643 455788888778999999999999996433333333433333333 44444444
Q ss_pred c
Q 005879 669 S 669 (672)
Q Consensus 669 ~ 669 (672)
.
T Consensus 936 ~ 936 (1140)
T KOG0208|consen 936 I 936 (1140)
T ss_pred e
Confidence 3
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-85 Score=727.01 Aligned_cols=539 Identities=24% Similarity=0.326 Sum_probs=444.4
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC----C--CCCCChhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-e
Q 005879 67 GFMWNPLSWVMEAAAIMAIALANG----G--GKPPDWQDFV---GIITLLVINSTISFIEENNAGNAAAALMARLAPK-G 136 (672)
Q Consensus 67 ~~~~~~~~~~~~~~~~l~~~~~~~----~--~~~~~~~~~~---~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 136 (672)
.||.+|+.+++++++++++++... . +....|++++ .+++.+++..+++.++++++++++++|++..++. +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 567899999999999999987542 1 1112466542 2334467888889999999999999999887764 8
Q ss_pred EEEE-CCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCc---ceeceeeeeCceE
Q 005879 137 KVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIE 212 (672)
Q Consensus 137 ~V~r-~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~ 212 (672)
+|+| ||++++|++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|++|+. ||+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8875 8999999999999999999999999999999999975 899999999999999999975 9999999999999
Q ss_pred EEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCC
Q 005879 213 AVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPI 291 (672)
Q Consensus 213 ~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~ 291 (672)
++|+++|.+|++|++.++++.+ .+++|++...+.+..++.+++++..+..+. +..+.+ ....+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~-~~~~~~--~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWP-FAAYGG--NAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcC--hhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 567888877766655433222222111111 111111 122466678899999999
Q ss_pred cchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHccc
Q 005879 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR 371 (672)
Q Consensus 292 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (672)
+++...+.....++.||.++|+++|+..++|++|++|++|||||||||+|+|++.++. .. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 8877777777789999999999999999999999999999999999999999998743 22 34566777776666554
Q ss_pred ccccchHHHHHHhhcCChHH--HhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHH
Q 005879 372 TENQDAIDAAIVGMLADPKE--ARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVH 448 (672)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~-~~~~~~~~ 448 (672)
. +.||++.+++.++..... .....+..+..||++.++++++.+. +| ..+.||++|.+++.|... ...+..++
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 4 456999999876532111 0112234678899998777765432 34 467899999999887532 22345678
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH
Q 005879 449 AVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 528 (672)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~ 528 (672)
+.+++++++|+|++++|++. +++|+++++||+||+++++|++|+++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999864 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 529 LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 529 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
+|++ +++++++|++|..+++.+|++|+.|+|+|||.||+|||++||+|||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9995 3699999999999999999999999999999999999999999999
Q ss_pred cccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 005879 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660 (672)
Q Consensus 609 mg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~ 660 (672)
|++|++.++++||++++++|+..+.+++++||+++-+......|+++.++.-
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 9999999999999999999999999999999999988888888888776653
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-85 Score=766.74 Aligned_cols=608 Identities=18% Similarity=0.179 Sum_probs=472.1
Q ss_pred hcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 48 IFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGN 123 (672)
Q Consensus 48 ~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~ 123 (672)
+|..|.+.+.+|++| +.+++||.++.+++|++.++++++..... ...+...++++++++++.+.+.++++++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999877 46789999999999999999998764322 235667788999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe-----cCCeEEeccCcCCCCcccccCCC-
Q 005879 124 AAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVTKGPG- 197 (672)
Q Consensus 124 ~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~-----g~~l~Vdes~LTGEs~pv~k~~~- 197 (672)
+.++.+ +..++|+|+|++++++|++|+|||+|+|++||.||||++|++ |. ++||||+|||||.|+.|.++
T Consensus 164 ~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~-~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 164 SDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGV-AYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred hHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCce-EEEEccccCCeeeeeEecccc
Confidence 987754 567999999999999999999999999999999999999998 44 58999999999999998642
Q ss_pred --------------------------------------------CcceeceeeeeC-ceEEEEEEecccccchhhhhhhc
Q 005879 198 --------------------------------------------DGVYSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (672)
Q Consensus 198 --------------------------------------------~~v~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~ 232 (672)
+.+++|+.+.++ .++|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 345667777766 49999999999997432 2222
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccC-c-----cc-----------------------cchhhHH
Q 005879 233 TTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVM--YPIQD-R-----EY-----------------------RPGIDNL 281 (672)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~-~-----~~-----------------------~~~~~~~ 281 (672)
.+.+.+++++.++++..+++++.++.+++..++. |.... . .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2367789999999987765544433333322221 21100 0 00 0012223
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHhhCC----------CcccchhhhhhhcCccEEEeeccccccCCccccccceEE
Q 005879 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE 351 (672)
Q Consensus 282 ~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 351 (672)
+.++..++|++|++.+++.+...+.++.++. +.||+.+..|+||+|++||+|||||||+|+|++.++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 4566689999999999999988788887754 779999999999999999999999999999999988762
Q ss_pred ecccC-----------------------------C------------C-h-----HHHHHHHHHcc---c----------
Q 005879 352 VFTKG-----------------------------V------------D-A-----DTVVLMAAQAS---R---------- 371 (672)
Q Consensus 352 ~~~~~-----------------------------~------------~-~-----~~~~~~~~~~~---~---------- 371 (672)
....+ . + . .+++...+.|. .
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 0 0 0 11222222221 1
Q ss_pred -----ccccchHHHHHHhhcCCh----------------HHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcH
Q 005879 372 -----TENQDAIDAAIVGMLADP----------------KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAP 430 (672)
Q Consensus 372 -----~~~~~~~~~ai~~~~~~~----------------~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~ 430 (672)
....+|.|.|++.++... ...+..++.++.+||+|+||||+++++.+++++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 112368899998775322 12345788999999999999999999888888999999999
Q ss_pred HHHHHhccCC--hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCeEE
Q 005879 431 EQILNLAHNK--SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQF 483 (672)
Q Consensus 431 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-------------------------~~~e~~l~~ 483 (672)
+.|+++|+.. .+.++.+.+++++|+++|+|||++|||.+++.++ +..|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999753 3457778899999999999999999999975432 246899999
Q ss_pred EEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 005879 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA----------------------- 540 (672)
Q Consensus 484 lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~----------------------- 540 (672)
+|+++++|++|++++++|+.|+++||++||+|||+..+|.++|++||+..+......
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 999999999999999999999999999999999999999999999999654321111
Q ss_pred ------------------------cccccccccCC---CccHHHHhhccC--eecccChhhHHHHHHHHhhC-CCEEEEE
Q 005879 541 ------------------------LLGQDKDESIA---ALPIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMT 590 (672)
Q Consensus 541 ------------------------~~~~~~~~~~~---~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-~~~v~~i 590 (672)
+.|..++..++ ...+.++..++. ++||++|.||.++|+.+|+. ++.|+|+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 11111111111 012334455555 69999999999999999987 5789999
Q ss_pred CCCccCHHHHhhCCeeEEc-c-cccHHHhhccCEEEcCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 591 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 591 GDg~ND~~al~~A~vgIam-g-~~~~~~k~~ad~v~~~~~~~~i~~~i~-~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
|||.||++||++|||||++ | +|. .|..+||+.+.. |.-+.+++- +||+.|+|+.+.+.|.+++|+.+.++.++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~-qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~ 953 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGR-QAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFW 953 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhH-HHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 4 344 466699999955 888888765 79999999999999999999999655543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-82 Score=719.58 Aligned_cols=506 Identities=26% Similarity=0.360 Sum_probs=441.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
.|.+...++++++++.+++.+.++|+++.+++|+++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 56777888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005879 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
+. .||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|.++++.++++++ .+++++++.+++++.+++++
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 56899999999999998877
Q ss_pred HHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeec
Q 005879 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (672)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (672)
++++.++.+++++.+...+|..++...+++++++|||+|.++.|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66666665555545455677778899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEE
Q 005879 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT 414 (672)
Q Consensus 335 TGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~ 414 (672)
|||||+|+|+|.++. .+ .+.++++++.+++..+ ..+.||++.|++.+.... +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e-~~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVE-QGSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998743 22 2456777777776554 345689999999874321 11 14565555554322
Q ss_pred -EE-eCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCC
Q 005879 415 -YI-DNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492 (672)
Q Consensus 415 -~~-~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~ 492 (672)
+. ..+|+.+. .|+++.+.+. .+.+.+.++.+..+|+|+++++++. +++|+++|+|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~~-------~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPPL-------ADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhhc-------cHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 21 22555544 4899887541 2334556678899999999999865 89999999999
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+||+++++|++|+++|++++|+|||+..++..+++++||. .+++..|++
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999994 367789999
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~ 652 (672)
|..+++.+++. +.|+|+|||.||+|||+.||||||||++++.++++||+++.++++.++.+++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccc
Q 005879 653 AVSITIRIVVSGSLDFS 669 (672)
Q Consensus 653 ~~~~n~~~~~~~~~~~~ 669 (672)
++.+|+.+++..++|+.
T Consensus 697 a~~~n~~~i~~a~~g~~ 713 (741)
T PRK11033 697 ALGLKAIFLVTTLLGIT 713 (741)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999888776653
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-82 Score=682.89 Aligned_cols=522 Identities=25% Similarity=0.348 Sum_probs=443.6
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCe-EEEEeCCCCCCCcEEEEcCCCeecccEE
Q 005879 93 KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADAR 171 (672)
Q Consensus 93 ~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiI~l~~G~~iPaD~~ 171 (672)
++..|.+...++.++.++.+++...+.++..++..|+++.|.++.++.+|+ .++|+.+.|++||+|+|+||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 333444555666777888999999999999999999999999999999996 8999999999999999999999999999
Q ss_pred EEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHH
Q 005879 172 LLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNF 250 (672)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~ 250 (672)
|++|++ +||||++|||++|+.|++|+.|.+||.+.+|.....++++|.||.+++|.++++++ .++.|.|+++|+++.|
T Consensus 417 Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 417 VVDGSS-EVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EEeCce-eechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 999998 89999999999999999999999999999999999999999999999999999998 6789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccC----------ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhh
Q 005879 251 CICSIAVGMIVEIIVMYPIQD----------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (672)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~ 320 (672)
+++.+++..+..+++|.+... ..+..++...+++++++|||+|.++.|.+...+....+++|+++|..+.
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~ 575 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEA 575 (951)
T ss_pred CCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHH
Confidence 877666655555554443322 2344566777889999999999999999999999999999999999999
Q ss_pred hhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEE
Q 005879 321 IEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVH 400 (672)
Q Consensus 321 le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~ 400 (672)
+|.+.++++|+||||||||+|++.+.+.. ......+..+++.+++..+ ..+.||+..|++.|+.............+
T Consensus 576 LE~~hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~E-s~SeHPig~AIv~yak~~~~~~~~~~~~~ 652 (951)
T KOG0207|consen 576 LEKAHKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAME-SGSEHPIGKAIVDYAKEKLVEPNPEGVLS 652 (951)
T ss_pred HHHHhcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHh-cCCcCchHHHHHHHHHhcccccCccccce
Confidence 99999999999999999999999998754 4443356666666555543 44567999999998754331111111122
Q ss_pred EecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCC
Q 005879 401 FLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480 (672)
Q Consensus 401 ~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~ 480 (672)
.-.|..+... +.+. .+++. +.-|+.+++.+.-. ...+.++..+++....|+.+.+++...
T Consensus 653 ~~~~pg~g~~--~~~~-~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~------------ 712 (951)
T KOG0207|consen 653 FEYFPGEGIY--VTVT-VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG------------ 712 (951)
T ss_pred eecccCCCcc--cceE-EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC------------
Confidence 2222222212 1111 12333 45699998877432 234557778888889999999999988
Q ss_pred eEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhh
Q 005879 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560 (672)
Q Consensus 481 l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (672)
++.|++.++|++|||+..+|+.||+.|++++|+|||+..+|+++|+++|++
T Consensus 713 -~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------- 763 (951)
T KOG0207|consen 713 -QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------- 763 (951)
T ss_pred -EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------
Confidence 999999999999999999999999999999999999999999999999975
Q ss_pred ccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHH
Q 005879 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (672)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr 640 (672)
.||+...|+||.+.|+.+|+++..|+|+|||+||+|||.+||||||||.|++.|.++||+|++.|++..++.+++.+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhccc
Q 005879 641 AIFQRMKNYTIYAVSITIRIVVSGSLDFS 669 (672)
Q Consensus 641 ~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 669 (672)
++++|+|.|+.|++.+|+..+..+.+.|.
T Consensus 842 kt~~rIk~N~~~A~~yn~~~IpIAagvF~ 870 (951)
T KOG0207|consen 842 KTVKRIKLNFVWALIYNLVGIPIAAGVFA 870 (951)
T ss_pred HHHhhHHHHHHHHHHHHHhhhhhheeccc
Confidence 99999999999999999998888877764
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-78 Score=669.29 Aligned_cols=505 Identities=28% Similarity=0.406 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCc
Q 005879 77 MEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGD 156 (672)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GD 156 (672)
+.++++++++++ .|+++..++++++++.+++.++++++.+.++++.+..+++++|+|||+++++++++|+|||
T Consensus 5 ~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GD 77 (536)
T TIGR01512 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGD 77 (536)
T ss_pred HHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCC
Confidence 344555666553 6888888899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005879 157 IISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 157 iI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
+|.+++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|++.++++++ .
T Consensus 78 iv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~ 156 (536)
T TIGR01512 78 VVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQS 156 (536)
T ss_pred EEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhh
Confidence 999999999999999999987 79999999999999999999999999999999999999999999999999988876 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005879 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.+++++.++++.++.+.++.+++++.... +..++..++++++++|||+||+++++++..+..++.++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gili 234 (536)
T TIGR01512 157 RKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILI 234 (536)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEE
Confidence 678999999999988776655555544444443222 233777889999999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcc
Q 005879 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAG 395 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~ 395 (672)
|+++++|++|+++++|||||||||+|+|++.+.. ..+++.+++..+ ..+.||++.|++.++.... .
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~e-~~~~hp~~~Ai~~~~~~~~----~ 300 (536)
T TIGR01512 235 KGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAAE-QASSHPLARAIVDYARKRE----N 300 (536)
T ss_pred cCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHHh-ccCCCcHHHHHHHHHHhcC----C
Confidence 9999999999999999999999999999998643 125566665443 4556799999998754321 1
Q ss_pred cceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCC
Q 005879 396 IQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKD 475 (672)
Q Consensus 396 ~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~ 475 (672)
+...+.+|. + ++.. ..+|+.+. .|+++.+.+... ..+..+|.+++.++.+.
T Consensus 301 ~~~~~~~~g---~---gi~~-~~~g~~~~--ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------- 351 (536)
T TIGR01512 301 VESVEEVPG---E---GVRA-VVDGGEVR--IGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------- 351 (536)
T ss_pred CcceEEecC---C---eEEE-EECCeEEE--EcCHHHHhhcCC-------------cchhhCCCeEEEEEECC-------
Confidence 222222221 1 1111 12454443 488876644210 14567888888887654
Q ss_pred CCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCC-cEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCcc
Q 005879 476 SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALP 554 (672)
Q Consensus 476 ~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 554 (672)
.++|.+.++|+++|+++++|+.|+++|+ +++|+|||+..++..+++++|++
T Consensus 352 ------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~---------------------- 403 (536)
T TIGR01512 352 ------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------------------- 403 (536)
T ss_pred ------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh----------------------
Confidence 8999999999999999999999999999 99999999999999999999995
Q ss_pred HHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEEEcCCChhHHH
Q 005879 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
++|++..|++|..+++.++.+++.|+|+|||.||++|++.||+||+|| ++++.++++||+++.+++++.+.
T Consensus 404 --------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~ 475 (536)
T TIGR01512 404 --------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLP 475 (536)
T ss_pred --------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHH
Confidence 257888999999999999999999999999999999999999999999 78999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccc
Q 005879 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLDFSN 670 (672)
Q Consensus 634 ~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 670 (672)
+++++||++++++++|+.|++.+|+..+...++|+.+
T Consensus 476 ~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~ 512 (536)
T TIGR01512 476 QAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLP 512 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999998888888764
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-77 Score=670.10 Aligned_cols=522 Identities=26% Similarity=0.375 Sum_probs=437.4
Q ss_pred HHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECC-eEEEEeCCCCCCCc
Q 005879 78 EAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDG-RWNEQDASILVPGD 156 (672)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g-~~~~i~~~~L~~GD 156 (672)
.++++++++++ .|.+++.++++++++.+++.++++++++.+++|....|++++|+||| ++++|++++|+|||
T Consensus 6 ~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GD 78 (556)
T TIGR01525 6 ALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGD 78 (556)
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCC
Confidence 34445555553 67788889999999999999999999999999998888999999996 99999999999999
Q ss_pred EEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-C
Q 005879 157 IISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (672)
Q Consensus 157 iI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (672)
+|.+++||.|||||+|++|++ .||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|++|++.+++.++ .
T Consensus 79 iv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~ 157 (556)
T TIGR01525 79 IVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQS 157 (556)
T ss_pred EEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhh
Confidence 999999999999999999996 79999999999999999999999999999999999999999999999999988776 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcc
Q 005879 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (672)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilv 315 (672)
+++++++.+++++.++++.++++.++.+++++... .. ..+..++++++++|||+||+++++++..+..+++++|+++
T Consensus 158 ~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 158 SKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-AL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 67889999999998877655555554444443322 12 6788899999999999999999999999999999999999
Q ss_pred cchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCC--hHHHHHHHHHcccccccchHHHHHHhhcCChHHHh
Q 005879 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD--ADTVVLMAAQASRTENQDAIDAAIVGMLADPKEAR 393 (672)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~ 393 (672)
|+++++|.+|++|++|||||||||+|+|++.++. ... +.+ .++++.+++..+. .+.||++.|+..++.......
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~~ 310 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLEL 310 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999998754 221 222 5666666665543 456799999998764321100
Q ss_pred cccc-eEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC
Q 005879 394 AGIQ-EVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG 472 (672)
Q Consensus 394 ~~~~-~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~ 472 (672)
.. + ....+| .+ ++.. ..+|. ..+..|+++.+ +.... + .+.....++.+..+|+|+++++.+.
T Consensus 311 ~~-~~~~~~~~---~~---gi~~-~~~g~-~~~~lg~~~~~-~~~~~--~-~~~~~~~~~~~~~~g~~~~~v~~~~---- 373 (556)
T TIGR01525 311 PK-QEDVEEVP---GK---GVEA-TVDGQ-EEVRIGNPRLL-ELAAE--P-ISASPDLLNEGESQGKTVVFVAVDG---- 373 (556)
T ss_pred cc-ccCeeEec---CC---eEEE-EECCe-eEEEEecHHHH-hhcCC--C-chhhHHHHHHHhhCCcEEEEEEECC----
Confidence 00 1 111111 11 1111 11341 23445888876 21111 1 1223455677889999999999865
Q ss_pred CCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCC-CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCC
Q 005879 473 RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIA 551 (672)
Q Consensus 473 ~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 551 (672)
+++|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 ---------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------- 425 (556)
T TIGR01525 374 ---------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------- 425 (556)
T ss_pred ---------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-------------------
Confidence 899999999999999999999999999 999999999999999999999995
Q ss_pred CccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH
Q 005879 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (672)
Q Consensus 552 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~ 631 (672)
++|++..|++|..+++.++..++.|+|+|||.||++|++.||+|+++|++++.+++.||+++.+++++.
T Consensus 426 -----------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~ 494 (556)
T TIGR01525 426 -----------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494 (556)
T ss_pred -----------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHH
Confidence 358889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccc
Q 005879 632 IISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSLDFSN 670 (672)
Q Consensus 632 i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 670 (672)
+.+++++||+++++|++++.|++++|+..+..+++||.+
T Consensus 495 l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~ 533 (556)
T TIGR01525 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLP 533 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999998888764
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-78 Score=668.38 Aligned_cols=477 Identities=35% Similarity=0.526 Sum_probs=416.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEe
Q 005879 104 ITLLVINSTISFIEENNAGNAAAALMA--RLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181 (672)
Q Consensus 104 i~~v~i~~~~~~~~~~~~~~~~~~l~~--~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vd 181 (672)
+++++++.+++.+++++.++..+.+.+ ..+++++|+|+| ++.|++++|+|||+|.+++||+|||||+|++|++ .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 345677888999999999999999888 778899999999 9999999999999999999999999999999986 799
Q ss_pred ccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHH-HHHHHHHHHHH
Q 005879 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIG-NFCICSIAVGM 259 (672)
Q Consensus 182 es~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~-~~~~~~~~~~~ 259 (672)
||+|||||.|+.|.+|+.+++||.+.+|.+.+.|+++|.+|..+++..++... ..++++++..+++. .++++++++.+
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998776 34678889999988 55554443333
Q ss_pred HHHHHHHhhccCc--cccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeecccc
Q 005879 260 IVEIIVMYPIQDR--EYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (672)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 337 (672)
++.++.++..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3333332222112 36678899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEEEEe
Q 005879 338 LTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYID 417 (672)
Q Consensus 338 LT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~ 417 (672)
||+|+|++.++.. ... ...+.||++.|++.+... +.+...||++.+++++..+..
T Consensus 241 LT~~~~~v~~~~~--~~~---------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSV--LGG---------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEe--cCC---------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 9999999987542 110 124568999999887532 123567999999888888764
Q ss_pred CCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcch
Q 005879 418 NAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDS 497 (672)
Q Consensus 418 ~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~ 497 (672)
+++ .++||+++.+.+.|.. +.+..+.+..+|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 323 4689999999988742 2334556788999999999987 8999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHH
Q 005879 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIV 577 (672)
Q Consensus 498 ~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 577 (672)
+++|+.|+++|++++|+|||+..++..+|+++|+ +++++|++|.+++
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 5889999999999
Q ss_pred HHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005879 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (672)
Q Consensus 578 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n 657 (672)
+.+|..|+.|+|+|||.||+|||+.|||||||+ ++++||++++++++..+..++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 005879 658 IRIVVSGSLDF 668 (672)
Q Consensus 658 ~~~~~~~~~~~ 668 (672)
+.++..+++++
T Consensus 475 ~~~~~~a~~~~ 485 (499)
T TIGR01494 475 LILIPLAALLA 485 (499)
T ss_pred HHHHHHHHHHH
Confidence 99977776543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=660.40 Aligned_cols=497 Identities=27% Similarity=0.407 Sum_probs=420.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~ 174 (672)
+|.....++++++++.+++.+.++++++.+++|++..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555566677778888999999999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHH
Q 005879 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (672)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (672)
|++ .||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|++.++++++ .+++++++..++++.++++
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 997 79999999999999999999999999999999999999999999999999999877 5678999999999998876
Q ss_pred HHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEee
Q 005879 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (672)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (672)
.+++..++.+++ |. .++..++++++++|||+|++++++++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~~~-~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFVI-WL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHHH-HH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 655544443333 21 3778899999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEE
Q 005879 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 334 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (672)
||||||+|+|++.++. .. .+.++++++.+++..+. .+.||++.|++.++.............+.+| . + ++
T Consensus 284 KTGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~-~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~---g-~--Gi 353 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEA-GSEHPLAKAIVSYAKEKGITLVEVSDFKAIP---G-I--GV 353 (562)
T ss_pred CCCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCcCCCCCeEEEC---C-c--eE
Confidence 9999999999998743 22 23456777777766554 3457999999987542211101111122221 1 1 11
Q ss_pred EEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCC
Q 005879 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (672)
Q Consensus 414 ~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~ 493 (672)
... .+|+. +..|+++.+.+... . +..+.++|.+++.++... +++|.+.++|++
T Consensus 354 ~~~-~~g~~--~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 354 EGT-VEGTK--IQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred EEE-ECCEE--EEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 111 23443 45699998754211 1 112457899999998765 899999999999
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
||+++++|++|++.|++++|+|||+...+..+++++|++ +|++..|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 4778889999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 653 (672)
..+++.++.+++.|+|+|||.||++|++.||+||+||++++.+++.||+++.+++++.+.+++++||+++++|++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccc
Q 005879 654 VSITIRIVVSGSLDFS 669 (672)
Q Consensus 654 ~~~n~~~~~~~~~~~~ 669 (672)
+.+|+..+..++++|.
T Consensus 536 ~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999888776554
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-75 Score=682.11 Aligned_cols=507 Identities=24% Similarity=0.354 Sum_probs=430.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
+|.+...++++++++.+++.+.+.++.+.+++|+++.|++++++|+|++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005879 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
+. .||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.++++.++++++ .+++++++..++++.+++++
T Consensus 365 ~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 EA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred eE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 56789999999999887766
Q ss_pred HHHHHHHHHHHHhhccC-ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEee
Q 005879 255 IAVGMIVEIIVMYPIQD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (672)
Q Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (672)
++++.++.+++|+.... ..|...+..++++++++|||+|++++++++..+..+++++|+++|+++++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 55554444444333211 12445667789999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEE
Q 005879 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 334 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (672)
||||||+|+|+|.+.. .. .+.++++++.+++..+. .+.||++.|++.+..+. ... ...+|..... .++
T Consensus 524 KTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g-~Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLP--QVNGFRTLRG-LGV 591 (834)
T ss_pred CCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCC--CcccceEecc-eEE
Confidence 9999999999997643 22 24566677777666543 45679999998764321 111 0112221111 122
Q ss_pred EEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCC
Q 005879 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (672)
Q Consensus 414 ~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~ 493 (672)
... .+|+. +.+|+++.+.+.... .+.+.+.++.+..+|.++++++++. .++|++.++|++
T Consensus 592 ~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 211 24543 456999987553211 2345666778889999999999876 899999999999
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
||+++++|++|++.|++++|+|||+..++..+++++|+. .++++..|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHH
Confidence 999999999999999999999999999999999999995 26888999999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 653 (672)
.++++.++.+++.|+|+|||.||++|++.||+||+||++++.++++||+++++++++++..++++||+++++|++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHH
Q 005879 654 VSITIRIVVSGS 665 (672)
Q Consensus 654 ~~~n~~~~~~~~ 665 (672)
+.+|+.++..++
T Consensus 782 ~~yn~~~i~~a~ 793 (834)
T PRK10671 782 FIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHH
Confidence 999999987765
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-76 Score=620.25 Aligned_cols=563 Identities=23% Similarity=0.265 Sum_probs=425.2
Q ss_pred CCCCH-HHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005879 35 EGLSS-QAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (672)
Q Consensus 35 ~GL~~-~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~ 113 (672)
+|+.. .+++....+||+|..+.+.|++-..|.+....||..+..++..++.+ . .+|++.+.-+++++..-.-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCL-D------eyWYySlFtLfMli~fE~t 233 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCL-D------EYWYYSLFTLFMLIAFEAT 233 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHh-H------HHHHHHHHHHHHHHHHHHH
Confidence 46663 44445555699999999999998888999999996555555555544 3 3777776666665544333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcC---CCeecccEEEEecCCeEEeccCcCCCCc
Q 005879 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL---GDIIPADARLLEGDPLKIDQSALTGESL 190 (672)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~---G~~iPaD~~ll~g~~l~Vdes~LTGEs~ 190 (672)
-..|+.+.-+.++. |...|..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+++.|+| .|||++|||||.
T Consensus 234 lV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESv 311 (1160)
T KOG0209|consen 234 LVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCc
Confidence 34444444333333 3445667999999999999999999999999987 678999999999998 599999999999
Q ss_pred ccccCC-----------------CCcceeceeeee-------------CceEEEEEEecccccchhhhhhhcccCCCChH
Q 005879 191 PVTKGP-----------------GDGVYSGSTCKQ-------------GEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240 (672)
Q Consensus 191 pv~k~~-----------------~~~v~aGt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 240 (672)
|..|.+ .+++|.||.+++ |.+.+.|++||.+|..|++.|.+....++-.-
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 999976 247999999985 56999999999999999988877664222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCc
Q 005879 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQD------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (672)
Q Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~il 314 (672)
.+.-..+ +++++++++++.. +|.|.. ++-...+..+..++...+|+.||+-++++...+...|+|.+++
T Consensus 392 Nn~Etf~---FILFLlVFAiaAa--~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vy 466 (1160)
T KOG0209|consen 392 NNRETFI---FILFLLVFAIAAA--GYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVY 466 (1160)
T ss_pred ccHHHHH---HHHHHHHHHHHhh--heEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhcee
Confidence 1111111 1222222222222 222221 2222345566777888999999999999999999999999999
Q ss_pred ccchhhhhhhcCccEEEeeccccccCCccccccceEEeccc-------CCChHHHHHHHH--Hccc---ccccchHHHHH
Q 005879 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK-------GVDADTVVLMAA--QASR---TENQDAIDAAI 382 (672)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-------~~~~~~~~~~~~--~~~~---~~~~~~~~~ai 382 (672)
|..|.++.-.|++|++|||||||||+..|.|.++.-..... ....+.+..+++ .... .--+||++.|.
T Consensus 467 CTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~ 546 (1160)
T KOG0209|consen 467 CTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKAT 546 (1160)
T ss_pred ecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHH
Confidence 99999999999999999999999999999998643101110 111223333332 2222 23478999999
Q ss_pred HhhcCChHH----------HhcccceEEEecCCCCCceEEEEEEeC----CCeEEEEEcCcHHHHHHhccCChHHHHHHH
Q 005879 383 VGMLADPKE----------ARAGIQEVHFLPFNPTDKRTALTYIDN----AGKMHRVSKGAPEQILNLAHNKSDIERRVH 448 (672)
Q Consensus 383 ~~~~~~~~~----------~~~~~~~~~~~~f~~~~~~~~v~~~~~----~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~ 448 (672)
+..+.-..+ ...+.++.+.+.|+|..|||+++.... +-+++..+|||||.|.++.. +.+..++
T Consensus 547 l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~ 623 (1160)
T KOG0209|consen 547 LEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYD 623 (1160)
T ss_pred HHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHH
Confidence 887521111 112477888999999999999887632 23678889999999998765 6788899
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005879 449 AVIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~l~~~--------~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
+...+|+++|.||+|++||+++.- .+++.|.+|+|.|++.|..|+++|++++|+.|++.+++++|+|||++.
T Consensus 624 ~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpL 703 (1160)
T KOG0209|consen 624 EIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPL 703 (1160)
T ss_pred HHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCcc
Confidence 999999999999999999998731 367889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCC---------------------------------------CCcccccccccccCCCccHHHHhhc
Q 005879 521 IGKETGRRLGMGTNMY---------------------------------------PSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 521 ~a~~ia~~~gi~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
||.++|+++||..... ++.+++|..++.......+..++.+
T Consensus 704 TAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h 783 (1160)
T KOG0209|consen 704 TACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPH 783 (1160)
T ss_pred chheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh
Confidence 9999999999965311 0112333333333334455667777
Q ss_pred cCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccH
Q 005879 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~ 614 (672)
..||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+-|+++
T Consensus 784 v~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 784 VWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 88999999999999999999999999999999999999999999999975554
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-72 Score=640.20 Aligned_cols=611 Identities=19% Similarity=0.244 Sum_probs=471.0
Q ss_pred HHHhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 005879 45 RLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120 (672)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~ 120 (672)
+..+|-.|.+.+.+|+++ +.+++||.++.|++|++.++++++. . ++...|.+.+++++++.++.+.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~--~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-L--SPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-c--cccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999999876 5789999999999999999999987 2 25567888899999999999999999999
Q ss_pred HHHHHHHHHHhcCCceEEEECCe-EEEEeCCCCCCCcEEEEcCCCeecccEEEEecCC----eEEeccCcCCCCcccccC
Q 005879 121 AGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (672)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~ 195 (672)
++++..+++ ..++.|.+++. ++...|++|++||+|.+..++.+|||.++++++. |+|++++|+||++.+.|.
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999988765 45688888644 8999999999999999999999999999997553 689999999999998875
Q ss_pred C-----------------------------------------------CCcceeceeeeeCc-eEEEEEEecccccchhh
Q 005879 196 P-----------------------------------------------GDGVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (672)
Q Consensus 196 ~-----------------------------------------------~~~v~aGt~v~~g~-~~~~V~~tG~~T~~g~i 227 (672)
. .+.+++|+.+.++. +.+.|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 23577888888876 89999999999987653
Q ss_pred hhhhcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccC------------c----cccchhhHHHHHHHhhc
Q 005879 228 AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQD------------R----EYRPGIDNLLVLLIGGI 289 (672)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~------------~----~~~~~~~~~~~~l~~~~ 289 (672)
. -..+.+++.+++..+.....+++.++..+++..+. .|.... . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 22346777888888877655443333222222221 111100 0 00112345567788899
Q ss_pred CCcchHHHHHHHHHHHHHHhh----------CCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCCh
Q 005879 290 PIAMPTVLSVTMAIGSHRLSQ----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDA 359 (672)
Q Consensus 290 P~~L~~~~~~~~~~~~~~l~~----------~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~ 359 (672)
|.+|++.+++....++..+.+ ....+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999998887744433 3678999999999999999999999999999999998876533222110
Q ss_pred H--------------------------------------------HHHHHHHHc---cc----------ccccchHHHHH
Q 005879 360 D--------------------------------------------TVVLMAAQA---SR----------TENQDAIDAAI 382 (672)
Q Consensus 360 ~--------------------------------------------~~~~~~~~~---~~----------~~~~~~~~~ai 382 (672)
+ +.....+.+ .. .+...|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 111111111 11 11235777887
Q ss_pred HhhcCChH----------------HHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhcc-CChHHHH
Q 005879 383 VGMLADPK----------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAH-NKSDIER 445 (672)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~-~~~~~~~ 445 (672)
+..+.+.. .....++.++.++|+|.||||||+++.++|+..+|||||+..|.++++ +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 76542211 013578999999999999999999999999999999999999999998 4456777
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCeEEEEEeeccCCCCcchHHH
Q 005879 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPRHDSAET 500 (672)
Q Consensus 446 ~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-------------------------~~~e~~l~~lG~i~~~d~~r~~~~~~ 500 (672)
...+++++|+.+|+|||++|||.++++++ +.+|++|+++|.+++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88899999999999999999999987652 35689999999999999999999999
Q ss_pred HHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc--------------------------------------
Q 005879 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-------------------------------------- 542 (672)
Q Consensus 501 I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-------------------------------------- 542 (672)
|+.|++||||+||+|||+.+||..++..|++..+......+.
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 999999999999999999999999999999876433211111
Q ss_pred -------cccccccCCCccHHH---Hh--hccCeecccChhhHHHHHHHHhh-CCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 543 -------GQDKDESIAALPIDE---LI--EKADGFAGVFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 543 -------~~~~~~~~~~~~~~~---~~--~~~~v~~~~~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
|..+...++...... +. .+..++||++|.||+.+|+..++ .+..+++||||+||++|++.|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111111111 11 13458999999999999999974 478999999999999999999999999
Q ss_pred c--cccHHHhhccCEEEcCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 610 A--DATDAARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 610 g--~~~~~~k~~ad~v~~~~~~~~i~~~-i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
+ +|.+ |..+||+.+.. |.-+.++ +-+||+.|.|+.+++.|.+++|+.+.+..+.
T Consensus 820 sG~EGmQ-AvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fw 876 (1151)
T KOG0206|consen 820 SGQEGMQ-AVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFW 876 (1151)
T ss_pred ccchhhh-hhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4555 55589999876 4444443 4569999999999999999999999666543
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-70 Score=566.14 Aligned_cols=594 Identities=21% Similarity=0.251 Sum_probs=442.5
Q ss_pred HHHHhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 005879 44 ERLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEEN 119 (672)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~ 119 (672)
.+.++|.+|.+...++.++ ..+++||...++.+|++.++.++......+. -..++.++.++++++...+.+++.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~--l~ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY--LSTYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc--hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 5677889999999888754 4567888888888888888887765443332 123345666777777788888888
Q ss_pred HHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe-----cCCeEEeccCcCCCCccccc
Q 005879 120 NAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVTK 194 (672)
Q Consensus 120 ~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~-----g~~l~Vdes~LTGEs~pv~k 194 (672)
++.+.....++.. ..+.-|+|...+ |+++|++||+|.+..+++||||.++++ |+ +.|-+-.|+||+.-+.|
T Consensus 152 ~r~~rd~~~Nse~--y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~-~FiRTDQLDGETDWKLr 227 (1051)
T KOG0210|consen 152 KRRRRDRELNSEK--YTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGS-CFIRTDQLDGETDWKLR 227 (1051)
T ss_pred HHHHhhhhhhhhh--heeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCc-eEEeccccCCcccceee
Confidence 8777776654322 223447776555 999999999999999999999999995 44 47999999999976665
Q ss_pred CC-----------------------------------------------CCcceeceeeeeCceEEEEEEecccccchhh
Q 005879 195 GP-----------------------------------------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKA 227 (672)
Q Consensus 195 ~~-----------------------------------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i 227 (672)
-| .|.++++|.+.+|.++|+|++||.+|+.-
T Consensus 228 l~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRsv-- 305 (1051)
T KOG0210|consen 228 LPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRSV-- 305 (1051)
T ss_pred ccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHHH--
Confidence 33 46799999999999999999999999631
Q ss_pred hhhhcccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHH
Q 005879 228 AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307 (672)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~ 307 (672)
++...-..+...++..++.+.+.+.+.+++..++.. .....+..|...+.+++.++...+|++|-+.+.++...-+..
T Consensus 306 MNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv--~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~ 383 (1051)
T KOG0210|consen 306 MNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMV--AMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQ 383 (1051)
T ss_pred hccCCcccccceeeeecccHHHHHHHHHHHHHHHHH--HhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhh
Confidence 111111144456677788888776655444433322 223345677788899999999999999999999999988877
Q ss_pred HhhC----CCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChH-H---------------------
Q 005879 308 LSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD-T--------------------- 361 (672)
Q Consensus 308 l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~-~--------------------- 361 (672)
+.++ |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.- +
T Consensus 384 i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~ 463 (1051)
T KOG0210|consen 384 IEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALS 463 (1051)
T ss_pred cccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccch
Confidence 7775 6789999999999999999999999999999999987754332211110 0
Q ss_pred -------------HHHHHHHcc--cc---------cccchHHHHHHhhcC-----------------ChHHHhcccceEE
Q 005879 362 -------------VVLMAAQAS--RT---------ENQDAIDAAIVGMLA-----------------DPKEARAGIQEVH 400 (672)
Q Consensus 362 -------------~~~~~~~~~--~~---------~~~~~~~~ai~~~~~-----------------~~~~~~~~~~~~~ 400 (672)
+..++.+.+ .. ...+|.+.|++++.+ .+.....+++++.
T Consensus 464 ~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~ 543 (1051)
T KOG0210|consen 464 RVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQ 543 (1051)
T ss_pred hhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEE
Confidence 111111111 00 011344444443321 1111234789999
Q ss_pred EecCCCCCceEEEEEEeC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCC----
Q 005879 401 FLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKD---- 475 (672)
Q Consensus 401 ~~~f~~~~~~~~v~~~~~-~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~---- 475 (672)
.|||+|+.|||+++++++ .++...|.|||+..|....... ++.++....|+++|+|++.+|.|.+++++++
T Consensus 544 vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~ 619 (1051)
T KOG0210|consen 544 VFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEE 619 (1051)
T ss_pred EeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHH
Confidence 999999999999999975 7899999999999998876543 4566677889999999999999999876521
Q ss_pred ----------------------CCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005879 476 ----------------------SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 476 ----------------------~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
.+|.+|.++|+.++||+++++++.+++.||+|||++||+|||+.+||..+|+..++..
T Consensus 620 ~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~s 699 (1051)
T KOG0210|consen 620 AYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFS 699 (1051)
T ss_pred HHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhcccee
Confidence 3588999999999999999999999999999999999999999999999999999865
Q ss_pred CCCC--------------------------CcccccccccccCC--CccHHHHhh--ccCeecccChhhHHHHHHHHhhC
Q 005879 534 NMYP--------------------------SSALLGQDKDESIA--ALPIDELIE--KADGFAGVFPEHKYEIVKRLQAR 583 (672)
Q Consensus 534 ~~~~--------------------------~~~~~~~~~~~~~~--~~~~~~~~~--~~~v~~~~~p~~K~~iv~~l~~~ 583 (672)
.... ..++.|+.++-.+. ..++-++.. ...++||++|.||+++++.+|++
T Consensus 700 R~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~ 779 (1051)
T KOG0210|consen 700 RGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKK 779 (1051)
T ss_pred cCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHh
Confidence 3221 11222222211100 112223222 23489999999999999999986
Q ss_pred -CCEEEEECCCccCHHHHhhCCeeEEc-ccccHHHhhccCEEEcCCChhHHHHHHHH-HHHHHHHHHHHHHHH
Q 005879 584 -KHICGMTGDGVNDAPALKKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYA 653 (672)
Q Consensus 584 -~~~v~~iGDg~ND~~al~~A~vgIam-g~~~~~~k~~ad~v~~~~~~~~i~~~i~~-gr~~~~~i~~~i~~~ 653 (672)
|..|+++|||.||++|+++||+||++ |+....|.-|||+.+.. |+.+.+++.+ ||..|+|-.+.-+|.
T Consensus 780 t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 780 TGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred hCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHH
Confidence 88999999999999999999999998 64334455699999965 8899988765 999999987766554
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-62 Score=494.65 Aligned_cols=479 Identities=26% Similarity=0.387 Sum_probs=379.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCc
Q 005879 108 VINSTISFIEENNAGNAAAALMARL-APKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSAL 185 (672)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V~r~-g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~L 185 (672)
++..+.+.+.|-|.+.+.+.|++.. ...++++++ |.++.+++.+|+.||+|.++.||+||+||.+++|.+ +||||.+
T Consensus 77 lFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAI 155 (681)
T COG2216 77 LFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAI 155 (681)
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhc
Confidence 3444455566655444445544332 234666665 899999999999999999999999999999999998 8999999
Q ss_pred CCCCcccccCCC---CcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHH
Q 005879 186 TGESLPVTKGPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIV 261 (672)
Q Consensus 186 TGEs~pv~k~~~---~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~ 261 (672)
||||.||.|++| +-|-.||.+++..++.++++.-.+|.+.||+.+++.+ ++++|-+--++-+..- +.+.+++
T Consensus 156 TGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~----LTliFL~ 231 (681)
T COG2216 156 TGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSG----LTLIFLL 231 (681)
T ss_pred cCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHH----HHHHHHH
Confidence 999999999998 6799999999999999999999999999999999887 5555544332222111 1111111
Q ss_pred HHHHHhhccCc--cccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeecccccc
Q 005879 262 EIIVMYPIQDR--EYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339 (672)
Q Consensus 262 ~~~~~~~~~~~--~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT 339 (672)
...-.|.+..+ .-...+...+++++|.+|-...-.++..-..++.|+.+.|++.++.+++|.+|.+|++..|||||+|
T Consensus 232 ~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT 311 (681)
T COG2216 232 AVATLYPFAIYSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTIT 311 (681)
T ss_pred HHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCcee
Confidence 11111111110 1123456778899999999888777776777899999999999999999999999999999999999
Q ss_pred CCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHH-Hh-cccc-eEEEecCCCCCceEEEEEE
Q 005879 340 LNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKE-AR-AGIQ-EVHFLPFNPTDKRTALTYI 416 (672)
Q Consensus 340 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~-~~-~~~~-~~~~~~f~~~~~~~~v~~~ 416 (672)
-|+=.-.+.. ..++.+.+++...+..++-.. ..|..++++....+... .+ .... ..++.||+.+.+++++..
T Consensus 312 ~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~D-eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~- 386 (681)
T COG2216 312 LGNRQASEFI---PVPGVSEEELADAAQLASLAD-ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL- 386 (681)
T ss_pred ecchhhhhee---cCCCCCHHHHHHHHHHhhhcc-CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC-
Confidence 9975554432 234778888776666554433 33566666654432210 11 1111 457899998877666543
Q ss_pred eCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCc
Q 005879 417 DNAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRH 495 (672)
Q Consensus 417 ~~~~~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~ 495 (672)
+++ ..+.||+.+.+........ ..++++++..++-++.|-..++++... +++|++.++|-++|
T Consensus 387 -~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~ 450 (681)
T COG2216 387 -PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKP 450 (681)
T ss_pred -CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcch
Confidence 233 5567999999999876433 368889999999999999999999877 99999999999999
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHH
Q 005879 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYE 575 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 575 (672)
+.+|-+.+||+.||+++|+||||+.||..+|++.|+++ ..++++|++|.+
T Consensus 451 Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------------fiAeatPEdK~~ 500 (681)
T COG2216 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------FIAEATPEDKLA 500 (681)
T ss_pred hHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------------hhhcCChHHHHH
Confidence 99999999999999999999999999999999999973 479999999999
Q ss_pred HHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHH
Q 005879 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (672)
Q Consensus 576 iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~ 642 (672)
+++.-|.+|+-|+|+|||.||+|||.+||||+||.+|+++|||++++|=+|+|...+.+.++.|++.
T Consensus 501 ~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 501 LIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred HHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=303.43 Aligned_cols=220 Identities=36% Similarity=0.536 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEe-cCCeEE
Q 005879 103 IITLLVINSTISFIEENNAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-GDPLKI 180 (672)
Q Consensus 103 ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~-~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~-g~~l~V 180 (672)
++++++++.++++++++++++.++++++..+++ +.|+|||+++.+++++|+|||+|.|++||.+||||+|++ |.+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~-~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSA-YV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEE-EE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccc-cc
Confidence 567778889999999999999999998888887 999999999999999999999999999999999999999 765 89
Q ss_pred eccCcCCCCcccccC-----CCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005879 181 DQSALTGESLPVTKG-----PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 181 des~LTGEs~pv~k~-----~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+....+ .+++++++..+++..+++++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999988776 44588999999998887655
Q ss_pred HHHHHHHHHHHHhh-ccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhh
Q 005879 255 IAVGMIVEIIVMYP-IQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323 (672)
Q Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~ 323 (672)
+++++++.+++++. ....+|...+..++.+++++||++||++++++...++.+|.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 54444444433322 2566788889999999999999999999999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-25 Score=215.86 Aligned_cols=211 Identities=31% Similarity=0.438 Sum_probs=148.9
Q ss_pred ccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCC
Q 005879 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNP 406 (672)
Q Consensus 327 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~ 406 (672)
|++||||||||||++++.+. . .....++..+... ...+.||+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhhh-----hhee
Confidence 68999999999999999981 1 3344444444333 3344578998888764432211 1111 1111
Q ss_pred CCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEE
Q 005879 407 TDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGL 486 (672)
Q Consensus 407 ~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~ 486 (672)
...+...... ++. +. |+++.+....... .............|...+.++.. +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 1111111111 111 22 8888887654211 11122223335666677777653 389999
Q ss_pred eeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeec
Q 005879 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 487 i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999421 3799
Q ss_pred cc--ChhhH--HHHHHHHhhCCCEEEEECCCccCHHHHhhCC
Q 005879 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (672)
Q Consensus 567 ~~--~p~~K--~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 604 (672)
+. +|++| .++++.|+.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.6e-15 Score=124.56 Aligned_cols=116 Identities=27% Similarity=0.387 Sum_probs=105.0
Q ss_pred EEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhc
Q 005879 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 482 ~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
...+.++---++=++++++|+.|++. ++++++|||...+....|+-.|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 57778888888899999999999999 99999999999999999999998642
Q ss_pred cCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-c--cccHHHhhccCEEEcC
Q 005879 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTE 626 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g--~~~~~~k~~ad~v~~~ 626 (672)
++++...|+.|.++++.|+++++.|+|+|||.||.+||+.||+||.. + +.++.+.++||+++.+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 57889999999999999999999999999999999999999999976 4 4677788999999854
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-13 Score=140.30 Aligned_cols=67 Identities=21% Similarity=0.214 Sum_probs=58.2
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|..-++.+.+ ..+.|++||||.||.+||+.||+|+||+||++.+|++||+|+.+++.+|+.++|+.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 45555555543 34679999999999999999999999999999999999999999999999998863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-13 Score=134.30 Aligned_cols=154 Identities=23% Similarity=0.310 Sum_probs=105.8
Q ss_pred EEeeccCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC-CC-ccc-c---ccc-----ccc----
Q 005879 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PS-SAL-L---GQD-----KDE---- 548 (672)
Q Consensus 485 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~-~~~-~---~~~-----~~~---- 548 (672)
|.+.-.|. +.+.+.++|++|+++|++++++|||+...+..+.+.+|+....+ .+ ..+ . +.. ++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 44444444 78999999999999999999999999999999999999864321 00 000 0 000 000
Q ss_pred ----------------cC------------CC---ccHHHHhhccC--e-------ecccChh--hHHHHHHHHhh----
Q 005879 549 ----------------SI------------AA---LPIDELIEKAD--G-------FAGVFPE--HKYEIVKRLQA---- 582 (672)
Q Consensus 549 ----------------~~------------~~---~~~~~~~~~~~--v-------~~~~~p~--~K~~iv~~l~~---- 582 (672)
.. .. ....+.+++.. + +....|. .|...++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 00 01111111111 0 1122332 36666655543
Q ss_pred CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 583 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 583 ~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
..+.++++||+.||.+|++.|++|+||+|+++.+|+.||+|+.+++.+|+.++|+.
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 34679999999999999999999999999999999999999999999999998863
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-13 Score=137.30 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=57.5
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC--EEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad--~v~~~~~~~~i~~~i~~ 638 (672)
.|..-++.+.+ ..+.|++||||.||.+||+.|+.||||+||++.+|++|| .|+.+|+.+|+.++|+.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 46655555543 346799999999999999999999999999999999988 78889999999999863
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.8e-13 Score=136.40 Aligned_cols=154 Identities=21% Similarity=0.231 Sum_probs=107.6
Q ss_pred EEeeccCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC---------Ccccccccccc------
Q 005879 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSALLGQDKDE------ 548 (672)
Q Consensus 485 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---------~~~~~~~~~~~------ 548 (672)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++....+. ...+....++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44554555 899999999999999999999999999999999999999752210 00000000000
Q ss_pred -----------------------------------------------cCC----------CccHHHHh---hc-----cC
Q 005879 549 -----------------------------------------------SIA----------ALPIDELI---EK-----AD 563 (672)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (672)
... .....+.. .. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00011110 00 00
Q ss_pred ee-------cccCh--hhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChh
Q 005879 564 GF-------AGVFP--EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (672)
Q Consensus 564 v~-------~~~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~ 630 (672)
.+ ....| .+|...++.+.+. .+.|++|||+.||.+||+.|+.|||||||++.+|+.||+++.+++.+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 22233 3577777666552 34699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 005879 631 VIISAVLT 638 (672)
Q Consensus 631 ~i~~~i~~ 638 (672)
||.++|++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99999875
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.7e-13 Score=135.53 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=57.7
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCE--EEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~--v~~~~~~~~i~~~i~ 637 (672)
.|..-++.+.+ ..+.|++||||.||++||+.|+.||||+||.+.+|++||+ |+.+++.+|+.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 47666666644 3467999999999999999999999999999999999996 788999999999986
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.1e-13 Score=131.24 Aligned_cols=145 Identities=19% Similarity=0.279 Sum_probs=101.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--Cccccc--cc------cccc------------
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLG--QD------KDES------------ 549 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~--~~~~~~--~~------~~~~------------ 549 (672)
++.+.+.++|++|+++|++++++|||+...+..+++.+++....+. ...+.. .. ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998643220 000000 00 0000
Q ss_pred --C-------------CC---ccHHHHhhccC--e-----ecccC--hhhHHHHHHHHhhC----CCEEEEECCCccCHH
Q 005879 550 --I-------------AA---LPIDELIEKAD--G-----FAGVF--PEHKYEIVKRLQAR----KHICGMTGDGVNDAP 598 (672)
Q Consensus 550 --~-------------~~---~~~~~~~~~~~--v-----~~~~~--p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ 598 (672)
. .. ..+...+.... + +..++ ...|...++.+.+. .+.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 00 00111111111 0 11222 34677777766543 446999999999999
Q ss_pred HHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005879 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 599 al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
|++.|++|+||+|+.+.+|+.||+|+.+++.+|+.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999999999998764
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.2e-12 Score=140.34 Aligned_cols=66 Identities=23% Similarity=0.308 Sum_probs=56.9
Q ss_pred HHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 573 KYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 573 K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
|..-++.+.+. .+.|++||||.||++||+.||+|||||||.+.+|++||+|+.+|+.+||.++|+.
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 44444444332 3579999999999999999999999999999999999999999999999999873
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-12 Score=101.42 Aligned_cols=67 Identities=39% Similarity=0.545 Sum_probs=60.3
Q ss_pred ccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCc-ccchHHHHHHHHHHhHHHHHHHHHHHHH
Q 005879 18 LENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEE-KKESKFLKFLGFMWNPLSWVMEAAAIMA 84 (672)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (672)
||.++.+++++.|+++ .+||+++|+++|+++||+|+++. +++++|..|+++|++|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 8999999999999966 89999999999999999999965 4577778999999999999999988875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.7e-12 Score=126.67 Aligned_cols=146 Identities=21% Similarity=0.275 Sum_probs=100.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-ccc--------cccc------------
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSAL-LGQ--------DKDE------------ 548 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--~~~~~-~~~--------~~~~------------ 548 (672)
.+.+.+.++|++|+++|++++++|||+...+..+.+.+|+....+ ....+ ... ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 488899999999999999999999999999999999999643211 00000 000 0000
Q ss_pred -------cC-------------CCccHHHHhhccC---------eecccCh--hhHHHHHHHHhh----CCCEEEEECCC
Q 005879 549 -------SI-------------AALPIDELIEKAD---------GFAGVFP--EHKYEIVKRLQA----RKHICGMTGDG 593 (672)
Q Consensus 549 -------~~-------------~~~~~~~~~~~~~---------v~~~~~p--~~K~~iv~~l~~----~~~~v~~iGDg 593 (672)
.. .......+.+... .+....| ..|...++.+.+ ..+.+++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0000111111110 1112223 367666666544 34679999999
Q ss_pred ccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH----HHHHHH
Q 005879 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 637 (672)
Q Consensus 594 ~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~----i~~~i~ 637 (672)
.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.++ +.++|+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 766664
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.1e-11 Score=127.16 Aligned_cols=66 Identities=23% Similarity=0.326 Sum_probs=56.7
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.|...++.+.+ ..+.+++|||+.||.+|++.|++|+||||+.+.+|+.||+|+.+++.+|+.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 35555554433 3457999999999999999999999999999999999999999999999999986
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=124.00 Aligned_cols=66 Identities=23% Similarity=0.194 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005879 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 571 ~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
..|...++.+.+ ..+.++++||+.||.+||+.||.|+||+|+++.+|+.||+++.+++.++|+++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 457666666653 457899999999999999999999999999999999999999988889999875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.6e-11 Score=119.19 Aligned_cols=62 Identities=18% Similarity=0.175 Sum_probs=52.4
Q ss_pred HHHHhhC--CCEEEEECCCccCHHHHhhCCeeEEccccc---HHHhhc--c-CEEEcCCChhHHHHHHHH
Q 005879 577 VKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 577 v~~l~~~--~~~v~~iGDg~ND~~al~~A~vgIamg~~~---~~~k~~--a-d~v~~~~~~~~i~~~i~~ 638 (672)
.+.++.. .+.++++||+.||.+||+.||+||||+|+. +.+|+. | ++|+.+++.+|+.++++.
T Consensus 185 ~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 185 KQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 3444444 678999999999999999999999999987 478886 4 599999999999999873
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.5e-11 Score=110.67 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=88.1
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHH
Q 005879 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (672)
Q Consensus 499 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (672)
.+|+.|+++|+++.++|+.+...+....+.+|+..-.. ...-.|+--..+++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~----------------------------~~kpkp~~~~~~~~ 92 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE----------------------------GIKKKTEPYAQMLE 92 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe----------------------------cCCCCHHHHHHHHH
Confidence 68999999999999999999999999999999852100 00123455566666
Q ss_pred HHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH
Q 005879 579 RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 579 ~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
.++...+.+++|||+.||.+|++.|++++||+|+.+.++..|++|+.+++.++++
T Consensus 93 ~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 93 EMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHH
Confidence 6666667899999999999999999999999999999999999999877766553
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.5e-11 Score=121.69 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=97.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-----CcccccccccccCCCccHHHHhhccCeec
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----SSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++..... ...++|.... .
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g------------------~ 242 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG------------------D 242 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC------------------c
Confidence 5789999999999999999999999998888888999998531100 0011110000 0
Q ss_pred ccChhhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 567 GVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
-.....|...++.+.++ .+.++++|||.||.+|++.||+|||| |+.+.+++.||+++..++++++...+-
T Consensus 243 iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 243 IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 01235677776666543 46899999999999999999999999 999999999999999999999987764
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-10 Score=117.36 Aligned_cols=63 Identities=21% Similarity=0.202 Sum_probs=51.2
Q ss_pred HHHHHhh---CCCEEEEECCCccCHHHHhhCCeeEEccccc-HH-----HhhccCEEEcCCChhHHHHHHHH
Q 005879 576 IVKRLQA---RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 576 iv~~l~~---~~~~v~~iGDg~ND~~al~~A~vgIamg~~~-~~-----~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
+++.++. ..+.|+++|||.||++||+.|++||||||+. +. .+..||+++...+.+|+.++++.
T Consensus 195 l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 195 LIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred HHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 3344444 5678999999999999999999999999654 22 44579999999999999998873
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.13 E-value=3e-10 Score=110.11 Aligned_cols=130 Identities=14% Similarity=0.082 Sum_probs=97.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccc-ccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG-QDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|++........+.+ .... . .....+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t----G------------~~~~~~ 130 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV----G------------YQLRQK 130 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE----C------------eeecCc
Confidence 57899999999999975 9999999999999999999999632111111100 0000 0 001346
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
+.|...++.+++.+..++++|||.||++|++.||+||++.. .+.++++||-...-.+.+.+..++.++
T Consensus 131 ~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~a-k~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 131 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHA-PENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred chHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecC-CHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 78999999998888889999999999999999999999974 556666666554456678888887765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-10 Score=105.91 Aligned_cols=110 Identities=25% Similarity=0.289 Sum_probs=86.9
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHH
Q 005879 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (672)
+|++|+++|+++.++||++...+..+.+.+|+.... .+ ....|+-...+++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~------~~----------------------~~~k~~~~~~~~~~ 87 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY------QG----------------------QSNKLIAFSDILEK 87 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE------ec----------------------ccchHHHHHHHHHH
Confidence 899999999999999999999999999999985310 00 01123333444454
Q ss_pred HhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH-HHHHHH
Q 005879 580 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAVL 637 (672)
Q Consensus 580 l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~-i~~~i~ 637 (672)
+....+.++|+||+.||.+|++.|+++++|.++.+..+..||+++.++..++ +.++++
T Consensus 88 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 88 LALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 4445678999999999999999999999999999999999999998886555 666654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-10 Score=116.05 Aligned_cols=65 Identities=23% Similarity=0.273 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
.|...++.+.+. .+.++++||+.||++|++.|++|+||+|+++.+|+.||+++.+++.+||.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 477777766553 45799999999999999999999999999999999999999999999998764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.8e-09 Score=109.09 Aligned_cols=67 Identities=24% Similarity=0.291 Sum_probs=55.7
Q ss_pred hHHHHHHHHh----hCC-CEEEEECCCccCHHHHhhCCeeEEcccccHHHh----hcc-CEEE--cCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQ----ARK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~----~~~-~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k----~~a-d~v~--~~~~~~~i~~~i~~ 638 (672)
.|...++.+. ... +.|+++||+.||++|++.|++|+||+||.+.+| .+| +.++ .+++.+|+.++|+.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 5655555444 456 899999999999999999999999999999999 666 7777 57789999998863
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-09 Score=95.61 Aligned_cols=115 Identities=23% Similarity=0.376 Sum_probs=90.0
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHH
Q 005879 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (672)
Q Consensus 499 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (672)
-.|+.|.+.||++.++|||+...+..-++++||.. +|-. ..+|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eeec--hHhHHHHHH
Confidence 57999999999999999999999999999999951 1111 245655554
Q ss_pred HHh----hCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH----HHHHHHHHHHHHHH
Q 005879 579 RLQ----ARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVLTSRAIFQR 645 (672)
Q Consensus 579 ~l~----~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~----i~~~i~~gr~~~~~ 645 (672)
.|. -..+.|+++||..||.|+|+..+.++|+.++++..++.||+|+..+.-.+ +.+.|..++..++-
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 443 34568999999999999999999999999999999999999998765333 44455555554443
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.4e-09 Score=83.27 Aligned_cols=59 Identities=41% Similarity=0.617 Sum_probs=52.4
Q ss_pred HcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005879 29 NLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (672)
Q Consensus 29 ~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 87 (672)
.|+++ ..||+.+|+++|+++||.|+++.++ .++|..|+++|++|+.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 36677 4599999999999999999998876 77788999999999999999999998875
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.3e-09 Score=102.59 Aligned_cols=114 Identities=23% Similarity=0.247 Sum_probs=85.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC-----cccccccccccCCCccHHHHhhccCee
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-----SALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
.++.|++.+.++.++++|.+|+++||-...-+..+++.+|++...... ..++|. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~-------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR-------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece-------------------ee
Confidence 578999999999999999999999999999999999999997532111 112221 22
Q ss_pred cc-cChhhHHHHHHHHhhC-C---CEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEE
Q 005879 566 AG-VFPEHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624 (672)
Q Consensus 566 ~~-~~p~~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~ 624 (672)
.. +..+.|...++.+... | +.+.++|||.||.|||+.||.++++.. .+..+..|+...
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~-~~~l~~~a~~~~ 199 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNP-KPKLRALADVRI 199 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCc-CHHHHHHHHHhc
Confidence 22 3346787777555443 3 469999999999999999999999964 444555666544
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=97.96 Aligned_cols=103 Identities=24% Similarity=0.335 Sum_probs=81.4
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH----
Q 005879 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY---- 574 (672)
Q Consensus 499 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~---- 574 (672)
.+|+.|+++|+++.++||++...+..+++.+|+... |. ..+.|.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998521 11 012233
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH
Q 005879 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
.+++.++...+.++|+||+.||.+|++.|+++++++++.+..+..||+++..+.-++..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~ 161 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAV 161 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHH
Confidence 33344444456899999999999999999999999988888899999999765544443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.9e-09 Score=104.35 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=58.5
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC----EEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad----~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.++ ...++++||+.||.+|++.++.||+|+|+.+.+|+.|| +|+.+++.+|+.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 577777766543 34699999999999999999999999999999999999 88888999999999874
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.6e-09 Score=101.94 Aligned_cols=128 Identities=20% Similarity=0.235 Sum_probs=91.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc-cccccccCCCccHHHHhhccCeecc-cC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-GQDKDESIAALPIDELIEKADGFAG-VF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~-~~ 569 (672)
++.|++++.++.|+++|+++.++||.....+..+.+.+|+.... ...... +..... .+... ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~-~~~~~~~~~~~~~--------------~~~~~~~~ 149 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF-ANRLEVEDGKLTG--------------LVEGPIVD 149 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-eeEEEEECCEEEE--------------EecCcccC
Confidence 57899999999999999999999999999999999999986311 100000 000000 00011 11
Q ss_pred hhhHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHH
Q 005879 570 PEHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 570 p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~ 635 (672)
+..|..+++.+.+ ..+.++++||+.||.+|++.||++++++ +.+.++++||+++.++++..+...
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 2235555554433 3356999999999999999999999985 568888999999999888776543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.6e-08 Score=98.09 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=99.5
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--C--CCccc-ccc-cc-cc--------------
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y--PSSAL-LGQ-DK-DE-------------- 548 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~--~~~~~-~~~-~~-~~-------------- 548 (672)
..+..|...+++++++++|+.++++|||+...+..+.+++++..+. + ....+ .+. .. +.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456789999999999999999999999999999999988876431 1 00000 000 00 00
Q ss_pred ---------c-----------------CCCcc----H---HHHhhcc--Ce---e-----cccCh--hhHHHHHHHHhhC
Q 005879 549 ---------S-----------------IAALP----I---DELIEKA--DG---F-----AGVFP--EHKYEIVKRLQAR 583 (672)
Q Consensus 549 ---------~-----------------~~~~~----~---~~~~~~~--~v---~-----~~~~p--~~K~~iv~~l~~~ 583 (672)
. ..... + .+.+... .+ + ....| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 00000 1 1111110 11 1 12233 4577777776543
Q ss_pred ----CCEEEEECCCccCHHHHhh-CCeeEEcccccHHHhhccC-------EEEcCCChhHHHHHHHH
Q 005879 584 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 584 ----~~~v~~iGDg~ND~~al~~-A~vgIamg~~~~~~k~~ad-------~v~~~~~~~~i~~~i~~ 638 (672)
.+.|+++||+.||.+|++. ++.|++|+|+.+.+|+.++ +++....-+|+.++++.
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4689999999999999998 6799999999999997654 77777788999998864
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.9e-08 Score=82.10 Aligned_cols=65 Identities=31% Similarity=0.404 Sum_probs=52.3
Q ss_pred ccchHHHHHHhhcCC------hHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccC
Q 005879 374 NQDAIDAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN 439 (672)
Q Consensus 374 ~~~~~~~ai~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~ 439 (672)
.++|.|.|++.+... ....+..++.++.+||+|++|||++++. .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 456788888776532 3456678999999999999999999987 3345777999999999999974
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.7e-07 Score=91.66 Aligned_cols=128 Identities=18% Similarity=0.168 Sum_probs=89.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++ +++.++|+.....+..+.+.+|+...........++..- . . .....|.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i---~---------~---~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI---T---------G---YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE---E---------C---ccccccc
Confidence 4679999999999999 999999999999999999999985311110000000000 0 0 0012367
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCE-EEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~-v~~~~~~~~i~~~i~ 637 (672)
.|...++.++..+..++|+|||.||.+|.+.||+|++.+...+.....+++ ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 788888888888899999999999999999999999887544444455665 43 44555555443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.4e-07 Score=99.77 Aligned_cols=146 Identities=18% Similarity=0.140 Sum_probs=93.4
Q ss_pred CCcchHHHH-HHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC----CC-cccccccc--------------------
Q 005879 493 PRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----PS-SALLGQDK-------------------- 546 (672)
Q Consensus 493 ~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~----~~-~~~~~~~~-------------------- 546 (672)
+.+...+++ +++++.|+.++++|||++.....+.++.++..+.+ .. .+..+...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 444455666 88999999999999999999999999998765421 00 00000000
Q ss_pred ---------------ccc-------CCCcc-------HHHHhhc----cC------eecccCh--hhHHHHHHHHhhC--
Q 005879 547 ---------------DES-------IAALP-------IDELIEK----AD------GFAGVFP--EHKYEIVKRLQAR-- 583 (672)
Q Consensus 547 ---------------~~~-------~~~~~-------~~~~~~~----~~------v~~~~~p--~~K~~iv~~l~~~-- 583 (672)
+.. ..... +.+.+.. .. .+..+.| ..|...++.|.+.
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 00000 1111110 01 1223334 3487777766543
Q ss_pred -----CCEEEEECCCccCHHHHhhCC-eeEEcccccHHHhhcc--------CEEEc-CCChhHHHHHHHH
Q 005879 584 -----KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVIISAVLT 638 (672)
Q Consensus 584 -----~~~v~~iGDg~ND~~al~~A~-vgIamg~~~~~~k~~a--------d~v~~-~~~~~~i~~~i~~ 638 (672)
.+.++++||+.||++||+.|+ .||||+|+.+.+|+.+ ++++. +++-+||.++|+.
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 458999999999999999999 6999999999999743 55533 6678999998864
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.3e-07 Score=88.40 Aligned_cols=117 Identities=26% Similarity=0.362 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
+++|++.+.|+.|++.|+++.++|+.....+..+++.+|+... +......... ..... ..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~--g~~~p----------~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDEK--GFIQP----------DGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcCC--CeEec----------ceeeEEccc
Confidence 5789999999999999999999999999999999999997521 1111110000 00000 011123355
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad 621 (672)
.|...++.+.+ ..+.++++||+.||.+|++.||++++++......+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 67666555433 345799999999999999999999999754554555554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.5e-07 Score=86.94 Aligned_cols=139 Identities=13% Similarity=0.050 Sum_probs=87.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-CcccccccccccCCCccHHHHhhccCee-ccc
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SSALLGQDKDESIAALPIDELIEKADGF-AGV 568 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 568 (672)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....... ...+.+..+...... ..... ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~--------~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH--------PCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC--------CCccccccC
Confidence 36899999999999999999999999999888888887754322211 111222211100000 00000 011
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
....|..+++.++...+.++|+|||.||.+|++.||+.+|-+.-.+..++.---...=++|..+...++
T Consensus 141 cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 135689999998888888999999999999999999988865322222211111122255777776664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.1e-07 Score=85.26 Aligned_cols=114 Identities=21% Similarity=0.260 Sum_probs=82.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc--------cccccccccCCCccHHHHhhccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA--------LLGQDKDESIAALPIDELIEKAD 563 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 563 (672)
.+.|++++.++.|++.|.++.++||--...+..++.++||+...+.... +.|-+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 4679999999999999999999999999999999999999853322211 11111000
Q ss_pred eecccChhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhCCeeEEcc-c-ccHHHhhccCE
Q 005879 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARSASDI 622 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgIamg-~-~~~~~k~~ad~ 622 (672)
.-.....|..++..+++. -+.++|+|||.||.+|+.-|+.=|+.+ + -.+.+|..|+.
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~ 213 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKW 213 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHH
Confidence 011134688888888774 457999999999999999988888775 3 33445555543
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.0001 Score=79.39 Aligned_cols=184 Identities=20% Similarity=0.237 Sum_probs=121.0
Q ss_pred CeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC-----------CCc-------cc
Q 005879 480 PWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSS-------AL 541 (672)
Q Consensus 480 ~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-----------~~~-------~~ 541 (672)
+-.|+|++....+.+++....|+.|-++-|+.+-.|-.+....+-+|+++||..... +.. ..
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 347999999999999999999999999999999999999999999999999853111 000 00
Q ss_pred cc-------------------ccccc-----------cC--------CCccHHHH-------------hh----ccCeec
Q 005879 542 LG-------------------QDKDE-----------SI--------AALPIDEL-------------IE----KADGFA 566 (672)
Q Consensus 542 ~~-------------------~~~~~-----------~~--------~~~~~~~~-------------~~----~~~v~~ 566 (672)
.+ ..++. .+ ....+.++ ++ -...|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 00 00000 00 00000000 00 112578
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHH--HHhhCCeeEEccccc-------------HH-HhhccC---------
Q 005879 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAP--ALKKADIGIAVADAT-------------DA-ARSASD--------- 621 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~--al~~A~vgIamg~~~-------------~~-~k~~ad--------- 621 (672)
.++|+.-.++++.+|+.|++|+.+|...|-.. .+-+||++||+..-. .. ..++.|
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 89999999999999999999999999988543 457889999874210 01 111222
Q ss_pred --------EEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 005879 622 --------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVS 663 (672)
Q Consensus 622 --------~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~ 663 (672)
+-......-.+..+|+-+|.....+|+.+.|.+.....+.+.
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi 1103 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVI 1103 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 111111122355677889998999999988887766665443
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.37 E-value=2e-06 Score=85.18 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=36.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
..+.++++|+.|+++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4445899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.2e-06 Score=84.66 Aligned_cols=135 Identities=12% Similarity=0.031 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--CcccccccccccCCCccHHHHhhccCeecccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +....+. ...+.++............ -+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~-------~~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDE-------HCQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccc-------cccccC
Confidence 57899999999999999999999999998888888887 6431111 1111221111000000000 000000
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhh--ccCEEEcCCChhHHHHHH
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~--~ad~v~~~~~~~~i~~~i 636 (672)
...|..+++.++.....++|+|||.||++|.+.||+.++-+.-.+.+++ .+.+.. ++|..+...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1347889998888878899999999999999999997774321122222 233333 4466665554
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.6e-06 Score=85.77 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=41.5
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005879 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
|.+.-.+...+++.++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 8 GTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 8 GTLLPPGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 3333345667789999999999999999999999999999999999853
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.4e-06 Score=88.62 Aligned_cols=140 Identities=11% Similarity=0.092 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHh-CCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc---c-------------------------
Q 005879 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL---L------------------------- 542 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~---~------------------------- 542 (672)
.+.++++++|+.|++ .|+.++++|||+...+..+.+.+++.-...+...+ .
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 79999999999999988887766542000000000 0
Q ss_pred ---cccccc----------cCCC--ccHHHH----hhccC--------eecccCh--hhHHHHHHHHhhC----CCEEEE
Q 005879 543 ---GQDKDE----------SIAA--LPIDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (672)
Q Consensus 543 ---~~~~~~----------~~~~--~~~~~~----~~~~~--------v~~~~~p--~~K~~iv~~l~~~----~~~v~~ 589 (672)
|..++. .... ..+..+ .+... .+..+.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0000 000000 00110 1112223 3677777765443 467999
Q ss_pred ECCCccCHHHHhhC----CeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 590 iGDg~ND~~al~~A----~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+||+.||.+||+.+ +.||+||++.+ .|++.+. +-+.+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCC--CHHHHHHHHH
Confidence 99999999999999 99999998753 4677774 4566665554
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.4e-06 Score=82.21 Aligned_cols=124 Identities=21% Similarity=0.291 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcc-------cccccccccCCCccHHHHhhccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSA-------LLGQDKDESIAALPIDELIEKAD 563 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 563 (672)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+.. +.+.... +.|.... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~---------------~ 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN---------------E 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC---------------C
Confidence 367999999999999999999999999999999999999863 1111100 1110000 0
Q ss_pred eecccChhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhh--CCeeEEcccc--cHHHhhccCEEEcCCChhHHHH
Q 005879 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~--A~vgIamg~~--~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
. ...+..|...++.+... .+.++++||+.||+.|.+. ++++++.|.. .+.....+|+++. ++..+..
T Consensus 149 ~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 149 P--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred c--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 0 00123466666665543 3579999999999999888 4555655532 2334556899884 4555544
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=5e-06 Score=82.14 Aligned_cols=126 Identities=18% Similarity=0.194 Sum_probs=92.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
..+-|++++++..|+++|++..++|+++...+..+.+..|+...... ++.+... ....-.|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~--i~g~~~~-----------------~~~KP~P 148 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV--IVGGDDV-----------------PPPKPDP 148 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--EEcCCCC-----------------CCCCcCH
Confidence 45679999999999999999999999999999999999998643211 1111111 1122346
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCC---eeEEccc--ccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~---vgIamg~--~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.....+++.+....+.++||||..+|+.|-+.|| +|+..|. ........+|+++ +++..+...+.
T Consensus 149 ~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 149 EPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 6667777777776558999999999999999999 6777773 3445556699998 44666665543
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.1e-06 Score=81.87 Aligned_cols=128 Identities=16% Similarity=0.136 Sum_probs=90.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ..++.+.... .....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 357899999999999999999999999999888999999985321 1111111100 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEccc----ccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~----~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
+--..+++.++...+.++++||+.||+.|.+.||+ +|.+.. ..+.....+++++ +++..+...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 33356667777677889999999999999999999 555532 2334445788888 6688888777643
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.1e-06 Score=84.78 Aligned_cols=92 Identities=24% Similarity=0.301 Sum_probs=68.4
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh-h-
Q 005879 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE-H- 572 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-~- 572 (672)
+++.+.|+.++++|++++++||.+...+..+++.+|++...+....+.... ......+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999974211111110000 01123444444 3
Q ss_pred -HHHHHHHH------hhCCCEEEEECCCccCHHHHh
Q 005879 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (672)
Q Consensus 573 -K~~iv~~l------~~~~~~v~~iGDg~ND~~al~ 601 (672)
|...++.+ +.....++++|||.||.+|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 456789999999999999996
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.1e-05 Score=78.93 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+.... ..++..++. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 57799999999999999999999999988888888888885321 111111110 01222343
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---cc--ccHHHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---AD--ATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g~--~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++...+.++||||+.+|+.+-+.||+.... |. ..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 34566666766678899999999999999999997542 32 2234566789987 4465555443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.6e-06 Score=78.75 Aligned_cols=98 Identities=20% Similarity=0.217 Sum_probs=68.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCee--cccCh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF--AGVFP 570 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~p 570 (672)
++|++.+.++.+++.|++++++||.....+..+++.+|+... +.......++ ..+.. .+. ....+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~~~--g~~~g----------~~~~~~~~~~ 140 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFDDN--GLLTG----------PIEGQVNPEG 140 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEECCC--CEEeC----------ccCCcccCCc
Confidence 579999999999999999999999999999999999998631 1110000000 00000 000 12345
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhC
Q 005879 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 571 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A 603 (672)
..|...++.+... .+.++++|||.||.+|++.|
T Consensus 141 ~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 141 ECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred chHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 7788888876543 45699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.10 E-value=1e-05 Score=77.71 Aligned_cols=113 Identities=15% Similarity=0.065 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc-cCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG-VFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~p 570 (672)
++.|++.+.++.|++.|+++.++|+........+.+..|+.... ..++........ ...+.....++..+.. ...
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~--~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN--DGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC--CCcEEEecCCCCccCcCCCC
Confidence 67899999999999999999999999999999988888875321 111111100000 0000000000111111 112
Q ss_pred hhHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeEE
Q 005879 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 571 ~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
..|..+++.++.+ .+.++++|||.||+.|.+.||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3588899998887 8899999999999999999987655
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.09 E-value=9.8e-06 Score=78.93 Aligned_cols=102 Identities=18% Similarity=0.145 Sum_probs=74.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC------CcccccccccccCCCccHHHHhhccCe
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP------SSALLGQDKDESIAALPIDELIEKADG 564 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (672)
.+++|++.+.++.+++.|++++++||.....+..+++.+|+..-... +..++|...
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~------------------ 147 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID------------------ 147 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc------------------
Confidence 46789999999999999999999999999999999999998632111 001111100
Q ss_pred ecccChhhHHHHHHHHhh-C---CCEEEEECCCccCHHHHhhCCeeEEcc
Q 005879 565 FAGVFPEHKYEIVKRLQA-R---KHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~-~---~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
-..+.++.|...++.+.. . .+.++++||+.+|.+|++.||.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012335677776665543 2 346899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.2e-05 Score=89.33 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=40.5
Q ss_pred EEeeccCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005879 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 485 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
|.+.-.|. +.+.+.++|++|+++|+.++++|||+...+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55554333 5568899999999999999999999999999999999974
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.5e-05 Score=80.34 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CccCHHHHhhC-CeeEEcccccHHHhhccCEEE
Q 005879 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~A-~vgIamg~~~~~~k~~ad~v~ 624 (672)
.+|..-++.|.+..+.|++||| |.||.+||+.| -.|++++|+++.+|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4688888888777889999999 99999999976 577777799999998776543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.9e-05 Score=70.91 Aligned_cols=117 Identities=15% Similarity=0.074 Sum_probs=75.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
...++.+++.+.++.|+++|++++++||+....+....+.+|+.... ..++........ ................+-
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAIY-YPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhhh-cccccccccccccccCCC
Confidence 34578999999999999999999999999999999999999874211 111110000000 000000000011123345
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhh-CCeeEE
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~-A~vgIa 608 (672)
.|..+..+.+.+....+.++++||+.||+.|++. ..-+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5666677777777667889999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.5e-05 Score=77.87 Aligned_cols=126 Identities=15% Similarity=0.156 Sum_probs=85.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++.|++.++|+.|+++|+++.++||.+...+..+.+..|+.... ..++.++... .....|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 367899999999999999999999999988888888888875321 1111111100 111122
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEc--c-c-ccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV--A-D-ATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iam--g-~-~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+--..+++.++...+.+++|||+.||+.|.+.||+. +++ | + ..+..+..+|+++ +++..+.+++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 223455566665667899999999999999999973 444 3 2 2233445789888 45777776544
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.6e-05 Score=74.95 Aligned_cols=124 Identities=19% Similarity=0.156 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.... ..++..+... .....|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999999988889999985321 1111111100 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE---ccc-ccH-HHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA---VAD-ATD-AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa---mg~-~~~-~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--.++++.++...+.+++|||+.+|+.|-+.||+-.. -|. ..+ .....+|+++ +++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 4456666666666789999999999999999998533 332 222 2344588887 4566666554
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.2e-05 Score=76.02 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
+...+.+.++|++|+++||.++++||+.......+.+++++..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4467789999999999999999999999999999999999864
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.6e-05 Score=74.83 Aligned_cols=121 Identities=14% Similarity=0.121 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+.... ..++.+++.. ..+..|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999998999999999985321 1111111100 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---ccc-c-HHHhhccCEEEcCCChhHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADA-T-DAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g~~-~-~~~k~~ad~v~~~~~~~~i~ 633 (672)
-=..+++.++...+.++++||+.||+.|.+.||+.... |.. . +.....||+++ +++..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 33555666666667899999999999999999987653 221 1 22234688887 3455443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=8.5e-05 Score=73.52 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=81.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
-++-|++.++|+.|++.|+++.++|+........+.+.+|+.... ..++.+.... ..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 357799999999999999999999999999999999999986432 1111111100 122233
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-c---ccHHHhhccCEEEcCCChhHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-D---ATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~---~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
+-=..+.+.++...+.++++||+.||+.+.+.||+....- . ..+.-...+|+++. ++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 3334455555555677999999999999999999876553 2 22222345777763 354443
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00011 Score=72.99 Aligned_cols=124 Identities=13% Similarity=0.103 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+.... ..++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 46799999999999999999999999988888888888875321 111111110 01223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE-c--cc--ccH-HHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--AD--ATD-AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa-m--g~--~~~-~~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++...+.++||||+.||+.|-+.||+... + |. ..+ .....+|+++ +++..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 4466777777777889999999999999999998753 2 21 111 2234589988 4466665544
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00011 Score=80.50 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+.+. ++.++. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC-------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111111 1134456
Q ss_pred hHHHHHH-HHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHH
Q 005879 572 HKYEIVK-RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA 615 (672)
Q Consensus 572 ~K~~iv~-~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~ 615 (672)
.|...+. .+.+ +.+.++||+.||.+|++.|+-.++++.+...
T Consensus 128 ~K~~~l~~~l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 128 AKAAALVEAFGE--RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred hHHHHHHHHhCc--cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 6655444 3332 2267899999999999999999999855443
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=71.29 Aligned_cols=124 Identities=17% Similarity=0.171 Sum_probs=82.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.. ..++.+.+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 3688999999999999999999999999999999999998751 111 1222221110 11223
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeEE--cccc---cHHH-hhccCEEEcCCChhHHHH
Q 005879 570 PEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA--VADA---TDAA-RSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 570 p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgIa--mg~~---~~~~-k~~ad~v~~~~~~~~i~~ 634 (672)
|+-=...++.+... .+.+++|||+.+|+.+-+.||+..+ +..+ .+.. ...+|+++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 33334555666554 4789999999999999999999863 3222 2222 23477777 34555443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.72 E-value=6.9e-05 Score=75.27 Aligned_cols=68 Identities=21% Similarity=0.228 Sum_probs=48.8
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHH-----Hhhcc---C-EEEcCCChhHHHHHHH
Q 005879 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSAS---D-IVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~-----~k~~a---d-~v~~~~~~~~i~~~i~ 637 (672)
..|...++.++.+ .+.|+++||+.||.+||..++-||.++|+.++ ..... . +....+.-.||.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5688888887765 35688899999999999999999999999887 32222 2 5666777888888876
Q ss_pred H
Q 005879 638 T 638 (672)
Q Consensus 638 ~ 638 (672)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00035 Score=81.50 Aligned_cols=172 Identities=16% Similarity=0.155 Sum_probs=101.2
Q ss_pred HHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeec--cCCCCcchHHHHHHHHh-CCCcEEEEcCCcHHHHH
Q 005879 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGK 523 (672)
Q Consensus 447 ~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~--~d~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~ 523 (672)
.+.....|...-.|.+++-+.. +++....- ...+.+++.++|++|.+ .|+.|+++|||+.....
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~ 546 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLE 546 (726)
T ss_pred HHHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHH
Confidence 3445566666667888776654 43332110 12367899999999999 59999999999998887
Q ss_pred HHHHHhCCCCCCCCCccc--ccccccccC---------------------------------------CCccH-------
Q 005879 524 ETGRRLGMGTNMYPSSAL--LGQDKDESI---------------------------------------AALPI------- 555 (672)
Q Consensus 524 ~ia~~~gi~~~~~~~~~~--~~~~~~~~~---------------------------------------~~~~~------- 555 (672)
.....+++.--..+...+ .+....... ...++
T Consensus 547 ~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~ 626 (726)
T PRK14501 547 RWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANE 626 (726)
T ss_pred HHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHH
Confidence 766544431000000000 000000000 00000
Q ss_pred -HHHhh----ccC--e-----ecccCh--hhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhC---CeeEEcccccHHH
Q 005879 556 -DELIE----KAD--G-----FAGVFP--EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAA 616 (672)
Q Consensus 556 -~~~~~----~~~--v-----~~~~~p--~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A---~vgIamg~~~~~~ 616 (672)
.+.+. ... + +..+.| .+|...++.+.+. ...++++||+.||.+||+.+ +.+|+||++
T Consensus 627 l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---- 702 (726)
T PRK14501 627 LILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---- 702 (726)
T ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----
Confidence 00010 000 0 112223 4688888887764 35899999999999999996 689999885
Q ss_pred hhccCEEEcCCChhHHHHHHH
Q 005879 617 RSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 617 k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+.+|++.+.++ +.+...++
T Consensus 703 ~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 703 ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCcceEeCCCH--HHHHHHHH
Confidence 45788988654 55666655
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00033 Score=71.41 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.+.|+.|++.|+++.++||.....+..+.+..|+..... ..++.+++.. ..+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 467899999999999999999999999988887777777643211 1222221110 1122333
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCe
Q 005879 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI 605 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v 605 (672)
-=...++.+... .+.++||||+.+|+.+-+.||+
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 334555566543 4679999999999999999997
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00034 Score=70.74 Aligned_cols=98 Identities=15% Similarity=0.073 Sum_probs=70.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.+.++.|+++|+++.++|+.....+..+.+.+|+..... ..++.+++.. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 457899999999999999999999999999998888888764321 2222222111 1222344
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCeeE
Q 005879 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=...++.+... .+.++||||+.+|+.+-+.||+-.
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 335556666643 567999999999999999999754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00012 Score=71.51 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g 530 (672)
++.+.+.++|++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00084 Score=67.57 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=82.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC----------CCcccccccccccCCCccHHHHhh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------PSSALLGQDKDESIAALPIDELIE 560 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 560 (672)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..... ....+.|...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~-------------- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG-------------- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC--------------
Confidence 3679999999999999999999999999999999999999853221 0111212100
Q ss_pred ccCeecccChhhHHHHH-----HHHh--hCCCEEEEECCCccCHHHHhhC---CeeEEcc--ccc-H----HHhhccCEE
Q 005879 561 KADGFAGVFPEHKYEIV-----KRLQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-D----AARSASDIV 623 (672)
Q Consensus 561 ~~~v~~~~~p~~K~~iv-----~~l~--~~~~~v~~iGDg~ND~~al~~A---~vgIamg--~~~-~----~~k~~ad~v 623 (672)
. -+....|...+ +.++ .....|+++|||.||++|..-. .--+.+| |.. + .-+++=|+|
T Consensus 186 --P---~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 --P---LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred --C---cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0 00112344333 2333 3456799999999999997654 2234444 432 2 234678999
Q ss_pred EcCCChhHHHHHH
Q 005879 624 LTEPGLSVIISAV 636 (672)
Q Consensus 624 ~~~~~~~~i~~~i 636 (672)
+.++.--.++.+|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9987655555544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00043 Score=70.08 Aligned_cols=116 Identities=18% Similarity=0.114 Sum_probs=80.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999998889885321 1222222111 1222343
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE-Ec-ccccHHHhhccCEEEcC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI-am-g~~~~~~k~~ad~v~~~ 626 (672)
-=...++.++...+.++||||+.+|+.+-+.||+-. ++ |.........+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 335666777766778999999999999999999854 33 32222233457888743
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00035 Score=68.53 Aligned_cols=106 Identities=13% Similarity=0.030 Sum_probs=74.2
Q ss_pred CCCcchHHHH-HHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCe-ecccC
Q 005879 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG-FAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~ 569 (672)
.+.|++.+.| +.+++.|++++++|+.....+..+++.+|+.. . ..+.+..++.... ..+ -..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~---~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-R---VNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-c---CceEEEEEEEEEc----------cEECCccCC
Confidence 3479999999 57888999999999999999999999998621 0 0111222211000 001 12355
Q ss_pred hhhHHHHHHHH-hhCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005879 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 570 p~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
.++|..-++.. ........+-||+.||.|||+.|+.+++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 67888776644 4445566789999999999999999999963
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00054 Score=69.00 Aligned_cols=117 Identities=12% Similarity=0.133 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+.... ..++.+++.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1222222211 1223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---ccccHH-HhhccCEEEcCC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDA-ARSASDIVLTEP 627 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g~~~~~-~k~~ad~v~~~~ 627 (672)
--...++.++...+.+++|||+.+|+.+-+.||+-... |...+. ....+|+++.+-
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 44666677776678899999999999999999986443 222222 234688888553
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00078 Score=68.64 Aligned_cols=121 Identities=12% Similarity=0.091 Sum_probs=82.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.+.++.|++.|+++.++|+.....+....+.+|+..... .++.+++. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCCC------------------C--CCHH
Confidence 467999999999999999999999999999999999999853211 11111110 0 0122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---c-cccH-HHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---A-DATD-AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g-~~~~-~~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++...+.+++|||+.+|+.+-+.||+-... | +..+ .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 22334445555567899999999999999999987543 3 2222 2234689988 4566666644
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00048 Score=67.32 Aligned_cols=106 Identities=12% Similarity=0.035 Sum_probs=73.5
Q ss_pred CCCcchHHHHH-HHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~-~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.+.|++.+.|+ .+++.|++++++|+-+...+..+++..++... .. +.+..++.. .... ..-..+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~-~i~t~le~~-~gg~--------~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LN-LIASQIERG-NGGW--------VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---Cc-EEEEEeEEe-CCce--------EcCccCCC
Confidence 46899999996 78889999999999999999999988665321 01 112222110 0000 01123556
Q ss_pred hhHHHHHHH-HhhCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005879 571 EHKYEIVKR-LQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 571 ~~K~~iv~~-l~~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
++|..-++. +........+-||+.||.|||+.||.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 788876664 3433445678999999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00091 Score=65.94 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+.. ...++.++... ...-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc-----------------CCCCCcH
Confidence 467999999999999999999999988766666666677631 11122111110 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEccccc-HHHhhccCEEEcC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~~-~~~k~~ad~v~~~ 626 (672)
-=...++.+....+.+++|||+.+|+.+-+.||+. |++.++. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 34555666766678899999999999999999985 5554332 2223457877643
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00068 Score=66.91 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=68.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+++|++++++|+-+...+....+.+|+.... ..++.+.+.. ..+-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEEG-----------------VEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccCC-----------------CCCCCHH
Confidence 46799999999999999999999999888788888888875321 1112111110 1122333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgI 607 (672)
-=..+++.+....+.+++|||.. +|+.+-+.||+-.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEE
Confidence 33455566665667899999998 9999999999843
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00073 Score=65.48 Aligned_cols=93 Identities=18% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
+++.+...++++.|++.|+++.++||.+...+..+.+.+|+.... ..++.+++ +..+..|
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~p 164 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPNP 164 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcCH
Confidence 446677799999999999999999999999999999999985321 11111111 1113445
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhC
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 603 (672)
+--..+++.++...+.+++|||+.+|+.+-+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 555666777777778899999999999987764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00091 Score=68.80 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=76.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+......+-+..+.......-..+.+.+.. ..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 46799999999999999999999999887777665555321100000111111100 1222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cc--cHHHhhccCEEEcC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DA--TDAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~--~~~~k~~ad~v~~~ 626 (672)
-=..+++.+....+.++||||+.+|+.|-+.||+..... .+ ++.....+|+++.+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 345666777766778999999999999999999876553 22 22112358888743
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0027 Score=60.13 Aligned_cols=146 Identities=19% Similarity=0.200 Sum_probs=90.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccccccc-------cc------CCCccHHHH
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD-------ES------IAALPIDEL 558 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~ 558 (672)
.+-|++.++++.|++.= ..+++|-.-.+-+..+|..+|++........+.-++.. +. .....-+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 35699999999998754 44555656667788999999985322211111000000 00 000011111
Q ss_pred hhcc-CeecccChhhHHHH---------------HHHHhhC---CCEEEEECCCccCHHHHhhCC-ee-EEcc-cccHHH
Q 005879 559 IEKA-DGFAGVFPEHKYEI---------------VKRLQAR---KHICGMTGDGVNDAPALKKAD-IG-IAVA-DATDAA 616 (672)
Q Consensus 559 ~~~~-~v~~~~~p~~K~~i---------------v~~l~~~---~~~v~~iGDg~ND~~al~~A~-vg-Iamg-~~~~~~ 616 (672)
.++. .+|.|..|.+-.++ ++.+... ....+++||++.|+.||+.+. -| +|+. ||.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 1111 25778877654444 4433332 234788999999999999873 33 7776 888888
Q ss_pred hhccCEEEcCCChhHHHHHHHH
Q 005879 617 RSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 617 k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
...||+.+.+.+..++...|+.
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8899999988888888877764
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0016 Score=68.67 Aligned_cols=63 Identities=21% Similarity=0.143 Sum_probs=46.6
Q ss_pred hhHHHHHHHHhhC-C---C---EEEEECCCccCHHHHhh-----CCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 571 EHKYEIVKRLQAR-K---H---ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~-~---~---~v~~iGDg~ND~~al~~-----A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.+|...++.+.+. + . .++++||+.||.+||+. +++||+||++.+.. .|++.+. +-+.+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcC--CHHHHHHHHH
Confidence 3788888777544 2 1 24899999999999996 69999999876533 5788774 4666766664
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0014 Score=62.11 Aligned_cols=99 Identities=9% Similarity=-0.003 Sum_probs=62.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH--------HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCe
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG 564 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (672)
+-|+++++++.|++.|+++.++|+.+.. ......+..|+..-. ......++.. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-ECcCCCCCCC-----------------C
Confidence 5799999999999999999999987631 122223445553110 0000000000 0
Q ss_pred ecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
..+-.|+-=..+++.++...+.++||||..+|+.+-+.||+-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 122234333566666666667899999999999999999987654
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00094 Score=66.08 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc----HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
.+.+++++.++.|++.|+++.++|||. ..++..+.+..|++........+.++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 366789999999999999999999985 4588888888998422111122222110
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
.-.+|...+ ++.+ .++++||..+|..+-+.||+-.
T Consensus 173 -~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 -GQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred -CCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 012344433 3333 4889999999999999998864
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0013 Score=63.70 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+++|+++.++|+-+........+.+|+.... ..++..++.. .....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~~-----------------~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADAVR-----------------AYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhhcC-----------------CCCCCHH
Confidence 46799999999999999999999999888888888888874321 1111111110 1112222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
-=..+.+.++...+.+++|||+.+|+.+-+.||+-..
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 2245566676667889999999999999999988643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0011 Score=65.57 Aligned_cols=102 Identities=10% Similarity=0.014 Sum_probs=71.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+.... ..++.+++.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeeeCC-----------------CCCCCHH
Confidence 56799999999999999999999998888877777778874321 1112111110 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee--EEcccc
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVADA 612 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg--Iamg~~ 612 (672)
-=..+.+.++-..+.+++|||+.+|+.+-+.||+. +++.++
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 33455566666677899999999999999999996 344443
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0018 Score=71.39 Aligned_cols=123 Identities=11% Similarity=0.074 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 57899999999999999999999999999999999999885321 1122222111 111232
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcc--cccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg--~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
--...++.++ .+.+++|||+.+|+.+-+.||+- |++. ...+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2223333332 46799999999999999999984 3443 22222234588887 457777666543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0032 Score=60.07 Aligned_cols=126 Identities=20% Similarity=0.134 Sum_probs=73.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCcccccccc-cccCCCccHH
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDK-DESIAALPID 556 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~ 556 (672)
+.|++.++++.|+++|+++.++|..+. .....+.+..|+.- . ..+..... .+
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~-~i~~~~~~~~~-------- 97 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---D-GIYYCPHHPED-------- 97 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---c-eEEECCCCCCC--------
Confidence 579999999999999999999998762 11122233444410 0 01100000 00
Q ss_pred HHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-cccc--H-HHhhcc--CEEEcCCChh
Q 005879 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADAT--D-AARSAS--DIVLTEPGLS 630 (672)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g~~~--~-~~k~~a--d~v~~~~~~~ 630 (672)
..-..+-.|+--..+++.+....+.++||||+.+|+.+-+.||+..-. ..+. + .....+ |+++ +++.
T Consensus 98 -----~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 98 -----GCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred -----CCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 000122334444566666776678899999999999999999975322 2222 1 122235 7776 4466
Q ss_pred HHHHHHH
Q 005879 631 VIISAVL 637 (672)
Q Consensus 631 ~i~~~i~ 637 (672)
.+.+.+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6655443
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0031 Score=66.59 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985321 1122221110 1122333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-ccccHHH-hhccCEEEcCCChhHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADATDAA-RSASDIVLTEPGLSVI 632 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g~~~~~~-k~~ad~v~~~~~~~~i 632 (672)
-=...++.++...+.++||||..+|+.|-+.||+-... ..+.+.. ...||+++. ++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 34566777777788899999999999999999986544 2332222 235888874 45554
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0017 Score=67.41 Aligned_cols=109 Identities=14% Similarity=0.056 Sum_probs=76.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
..+++.+++.++++.|++.|++++++||++...+..+.+.+|+....+. .+.+.+. ...++... .-.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc--------hhhhcccC-CCCCC
Confidence 5678999999999999999999999999999999999999887531111 1111110 00000000 01234
Q ss_pred ChhhHHHHHHHHhh-CCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 569 FPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 569 ~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
.|+-+...++.+.. ..+.++||||..+|+.+-+.||+-..
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 46667777776654 34789999999999999999998753
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0025 Score=62.95 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+-....+....+.+|+.... ..++.+.+.. ..+..|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 4678999999999999 999999999888888888888885321 1111111100 1122233
Q ss_pred hHHHHHHHH-hhCCCEEEEECCCc-cCHHHHhhCCeeE-Ec--ccccHHHhhccCEEEcCCChhHHHH
Q 005879 572 HKYEIVKRL-QARKHICGMTGDGV-NDAPALKKADIGI-AV--ADATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 572 ~K~~iv~~l-~~~~~~v~~iGDg~-ND~~al~~A~vgI-am--g~~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
-=...++.+ ....+.+++|||+. +|+.+-+.+|+-. .. +..++.....+++++ +++..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 234556666 55567899999998 8999999999733 33 222222233566766 34555443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0022 Score=57.67 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKAD 563 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (672)
++.|++.++++.|+++|+++.++|+.. ........+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 577999999999999999999999998 66777788888874210 00000
Q ss_pred eecccChhhHHHHHHHHh-hCCCEEEEECC-CccCHHHHhhCCeeE
Q 005879 564 GFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADIGI 607 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~-~~~~~v~~iGD-g~ND~~al~~A~vgI 607 (672)
...+-.|+-=..+++.++ ...+.++|||| ..+|+.+-+.+|+-.
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 011222333346666663 66778999999 699999999998743
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0042 Score=57.64 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=64.3
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCcccccccccccCCCccHHHHhhc
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
+|.+.|++++++++++++|++++++|||+...+. .....+ | ++. .+...-.|.... . ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~---------~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFA---------A-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchh---------h-hhc
Confidence 4678999999999999999999999999988774 444442 2 321 000001111000 0 000
Q ss_pred cCeecccCh-hhHHHHHHHHhh-----CCCEEEEECCCccCHHHHhhCCee
Q 005879 562 ADGFAGVFP-EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 562 ~~v~~~~~p-~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
.+. ...| +.|...++.+.. ....++.+||+.+|+.+-+++++-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 1223 337667766665 345677899999999999988764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00091 Score=62.87 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=71.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|++++++|+.+........+.+|+... ...++...+.. .....|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHHH
Confidence 4679999999999999999999999999999999999998621 11222221111 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=..+++.++...+.+++|||+..|+.+-+.||+.-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 335667777777788999999999999999998753
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0014 Score=62.67 Aligned_cols=95 Identities=11% Similarity=0.036 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++|+.|+++|+++.++|+... +....+.+|+.... ..++.+.+.. ..+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC-----------------CCCCChH
Confidence 5679999999999999999999997543 34567777775321 1111111110 1222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=...++.++...+.++||||+.+|+.+-+.||+-.
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 334555556555667999999999999999998853
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0019 Score=63.94 Aligned_cols=88 Identities=19% Similarity=0.199 Sum_probs=60.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCC----cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
+.+.+++.++.++++|+++.++|++ ...++..+.+.+|+.... ..++.++... ..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f--~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN--PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe--eEEECCCCCC-------------------CC
Confidence 3455999999999999999999999 667888999999996321 1112211110 01
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
.| +|.. .+++.+ .++|+||..||..+-+.|++-
T Consensus 174 Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 2332 334444 479999999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0037 Score=59.42 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+..... ..+..++|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 567999999999999999999999988777 5555557774321 111111110 01222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
--..+.+.+......+++|||...|+.+-+.+|+-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 33556666666678899999999999999999873
|
HAD subfamilies caused by an overly broad single model. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0019 Score=59.22 Aligned_cols=105 Identities=11% Similarity=0.030 Sum_probs=72.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC----CCCCCC--CCcccccccccccCCCccHHHHhhccCee
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG----MGTNMY--PSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
.++|+-++.++.+++.+++++++|+-.......+-+.++ |.+..+ +...+..+... ..++
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h--------------~i~~ 138 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH--------------SIKY 138 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce--------------eeec
Confidence 478999999999999999999999888777777776665 221100 00000000000 0011
Q ss_pred c--ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005879 566 A--GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 566 ~--~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
- ..-..+|...|+.+.++.+.+.++|||+.|++|-+.+|+=.|-.
T Consensus 139 ~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~ 185 (220)
T COG4359 139 TDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKD 185 (220)
T ss_pred CCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhHH
Confidence 1 11235799999999999999999999999999999988877653
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0062 Score=60.22 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+.... ..++.+.+.. ...-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC-----------------CCCCCHH
Confidence 36799999999999 68999999998888888777888874311 1111111110 1112232
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCc-cCHHHHhhCCeeE-Ecc-cccHH-HhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIGI-AVA-DATDA-ARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~-ND~~al~~A~vgI-amg-~~~~~-~k~~ad~v~~~~~~~~i~~~i 636 (672)
-=..+++.++.. .+.+++|||+. +|+.+-+.||+-. .+. .+.+. ....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 224555666533 36799999998 7999999999863 333 22211 112478877 4466666544
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0023 Score=61.15 Aligned_cols=95 Identities=13% Similarity=0.115 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+. ..+..+.+..|+.... ..++.+.... ..+..|+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~~~-----------------~~kp~~~ 146 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADEVK-----------------EGKPHPE 146 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhhCC-----------------CCCCChH
Confidence 57899999999999999999999987 5567777778874321 1111111000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=..+.+.+....+.+++|||+.+|+.+-+.||+..
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 223445555555677999999999999999998853
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0061 Score=57.45 Aligned_cols=110 Identities=8% Similarity=0.053 Sum_probs=74.4
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeec--cCCCCcchHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhC
Q 005879 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL--FDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLG 530 (672)
Q Consensus 454 ~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~--~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~g 530 (672)
+.+.|.+.+.+-... .+.- ...+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|
T Consensus 20 ~~~~~v~~vv~D~Dg-----------------tl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~g 82 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-----------------TLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALG 82 (170)
T ss_pred HHHCCCCEEEEecCC-----------------ccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcC
Confidence 456788888776432 1111 23567899999999999999999999988 566777777777
Q ss_pred CCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEE
Q 005879 531 MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIA 608 (672)
Q Consensus 531 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIa 608 (672)
+... .+ ...-.|+-=..+++.+....+.++||||.. .|+.+-+.||+-..
T Consensus 83 l~~~-------~~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i 133 (170)
T TIGR01668 83 IPVL-------PH---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTI 133 (170)
T ss_pred CEEE-------cC---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEE
Confidence 6310 00 011122222344455555567799999998 79999999998543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0049 Score=66.09 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=75.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH-HhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+++.. ...-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC-----------------CCCCCH
Confidence 456999999999999999999999998877766554 56663211 1111111100 122233
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-ccc--cHHHhhccCEEEc
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARSASDIVLT 625 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g~~--~~~~k~~ad~v~~ 625 (672)
+-=..+++.+....+.+++|||+.+|+.+-+.||+.... ..+ .......+|.++.
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 333566666666678899999999999999999987443 332 2223345677663
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0043 Score=56.95 Aligned_cols=100 Identities=19% Similarity=0.195 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCcccccccc-cccCCCccH
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDK-DESIAALPI 555 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~ 555 (672)
++.|++.++++.|++.|+++.++|+.+. ..+....+.+|+... ..+..... ...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~------ 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD----GVLFCPHHPADN------ 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee----EEEECCCCCCCC------
Confidence 4679999999999999999999998652 344556677776411 00000000 000
Q ss_pred HHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
.-...-.|+-=..+++.++...+.++||||...|+.+-+.+|+-..
T Consensus 97 -------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 97 -------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0001112222244555555556789999999999999999987543
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0078 Score=57.12 Aligned_cols=120 Identities=15% Similarity=0.071 Sum_probs=66.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCC-C-Ccccccc-cccccCCCcc
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMY-P-SSALLGQ-DKDESIAALP 554 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~-~-~~~~~~~-~~~~~~~~~~ 554 (672)
+.|++.++|+.|+++|+++.++|.-+. .....+....++.-..+ . .....+. ....
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~------ 100 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQ------ 100 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccC------
Confidence 568999999999999999999997663 11112233333321000 0 0000000 0000
Q ss_pred HHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE--EcccccH---HHhhccCEEEc
Q 005879 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI--AVADATD---AARSASDIVLT 625 (672)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI--amg~~~~---~~k~~ad~v~~ 625 (672)
......-.|+-=....+.++...+.++||||..+|+.+-+.||+.. .+..|.. .....||+++.
T Consensus 101 -------~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 101 -------VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 0001112233334555556556678999999999999999999964 3333321 12234888883
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0043 Score=57.83 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=62.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCcccc----cccccccCCC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALL----GQDKDESIAA 552 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~----~~~~~~~~~~ 552 (672)
++-|++.++|+.|+++|+++.++|... ...+..+.+.+|+. +....+. .++..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~----- 100 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDDNCD----- 100 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCCCCC-----
Confidence 356899999999999999999999752 34556667777774 1111111 00000
Q ss_pred ccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 553 LPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 553 ~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+..-.|+-=..+++.++...+.++||||+.+|..+-+.|++....
T Consensus 101 ------------~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 101 ------------CRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------------CCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 111112222344444444456799999999999999999987654
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0087 Score=58.13 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=62.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.++++.|+++|+++.++|+-... .....+.+|+.... ..++...+.. ...-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC-----------------CCCCCHH
Confidence 46789999999999999999999986654 45666777774211 1111111100 1122232
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCee
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg 606 (672)
-=..+++.+....+.+++|||+. +|+.+-+.||+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 23455566665667899999997 899999998864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.011 Score=55.67 Aligned_cols=106 Identities=7% Similarity=-0.026 Sum_probs=67.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 489 LFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+..... ...+...++. .+.+.
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd~-iv~~~ 105 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFDD-RIEIY 105 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhcee-eeecc
Confidence 34467899999999999999999999987 8888888888888741100 0000000000 01111
Q ss_pred cChhhH--HHHHHHHh------hCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005879 568 VFPEHK--YEIVKRLQ------ARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 568 ~~p~~K--~~iv~~l~------~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
-.+..| ..+.+.+. -..+.++||||...|+.+-+.|++-+..-
T Consensus 106 ~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 106 KPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred CCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 111111 23344443 23468999999999999999999877553
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.028 Score=51.20 Aligned_cols=112 Identities=12% Similarity=0.166 Sum_probs=80.8
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 005879 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (672)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~ 529 (672)
..+.+.++|++.+.+-..+ +++..= .....|+.++-+..++++|+++.++|..+...+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567889999998775443 332221 1236689999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH--HHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCee
Q 005879 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDG-VNDAPALKKADIG 606 (672)
Q Consensus 530 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vg 606 (672)
|++. ++.-..|--+ .+.++.++...+.|+|+||. ..|+-+=+.||+-
T Consensus 84 ~v~f------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred CCce------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 9862 1222233322 45667777778899999999 4677766666554
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0075 Score=55.68 Aligned_cols=90 Identities=20% Similarity=0.200 Sum_probs=60.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
..+++.+.++.|++.|+++.++|+.....+....+.. +... . ..++..+ .+..+..|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecC------------------CCCCCcCHHH
Confidence 3478999999999999999999999988888777764 3211 1 1111110 0112222333
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCC
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 604 (672)
=..+++.++... .++++||+.+|+.+-+.||
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 345555565555 8999999999999988875
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.04 Score=64.84 Aligned_cols=68 Identities=9% Similarity=0.132 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHH-HhCCCcEEEEcCCcHHHHHHHH
Q 005879 448 HAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETG 526 (672)
Q Consensus 448 ~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l-~~~Gi~v~~~TGd~~~~a~~ia 526 (672)
......|.+...|.+++-|.. +++-.-...-.+.++..+++++| ++.|+.|+++|||.........
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence 334556666666777766554 33321111235668999999997 7789999999999998887765
Q ss_pred HH
Q 005879 527 RR 528 (672)
Q Consensus 527 ~~ 528 (672)
..
T Consensus 652 ~~ 653 (854)
T PLN02205 652 SP 653 (854)
T ss_pred CC
Confidence 43
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.017 Score=56.94 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH-HHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.|+.|++.|+++.++||-....... ..+..++... -...+.+++.+ .-...-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhh---------------ccCCCCCc
Confidence 467999999999999999999999987643322 2222233210 01111111000 00111223
Q ss_pred hhHHHHHHHHh---hCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 571 EHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+-=...++.+. ...+.+++|||+..|+.+-+.||+-...
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 33345556664 4457899999999999999999986544
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.0074 Score=55.46 Aligned_cols=97 Identities=13% Similarity=-0.042 Sum_probs=67.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+++.... ...++.+++.. +..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d~~-------------------~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDECV-------------------FVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECcccc-------------------ccCC
Confidence 357999999999998 57999999999999999999888874311 11122221111 1112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
. =.+.++.+....+.+++|||..+|..|-+.+++-|..
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 1 1222455555678899999999999998888776654
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.082 Score=55.46 Aligned_cols=63 Identities=19% Similarity=0.161 Sum_probs=44.5
Q ss_pred hhHHHHHHHHhhC-------CCEEEEECCCccCHHHHhhC-----CeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 571 EHKYEIVKRLQAR-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~-------~~~v~~iGDg~ND~~al~~A-----~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.+|...++.|.+. ...++++||...|-.||+.. ++||.+|.... ...|++.+ ++-+.+...|+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL~ 356 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFLA 356 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHHH
Confidence 3788888877653 23589999999999999865 57777774322 24678877 44667766654
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.032 Score=54.77 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=68.0
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC---CCCCCCCCcccccccccccCCCccHHHHhhccCeec
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
+-++.|++.++++.|+++|+++.++|..+......+.+..+ +... .. ..+ + ..+-.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f~-~~f-----d--------------~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-FS-GYF-----D--------------TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-cc-eEE-----E--------------eCccc
Confidence 34688999999999999999999999988776666555442 2110 00 000 0 00111
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
.-.|+-=..+++.++...+.++++||...|+.+-+.||+-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2233333666777776678899999999999999999997654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.014 Score=58.52 Aligned_cols=66 Identities=21% Similarity=0.191 Sum_probs=47.6
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhC--------CeeEEcccccHHHhhccCEEEcCCChhHHHHH
Q 005879 568 VFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A--------~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~ 635 (672)
..+.+|...++.+.+. ...++++||+.||.+|++.+ +.+|+|+.+. .+..|++++. +.+.+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHH
Confidence 3456787777665443 45799999999999999999 5888886432 4567899885 45666665
Q ss_pred HH
Q 005879 636 VL 637 (672)
Q Consensus 636 i~ 637 (672)
++
T Consensus 239 L~ 240 (244)
T TIGR00685 239 LG 240 (244)
T ss_pred HH
Confidence 53
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.04 Score=51.62 Aligned_cols=93 Identities=8% Similarity=-0.011 Sum_probs=59.0
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhc
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ...+.+...
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~--------------- 104 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG--------------- 104 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC---------------
Confidence 489999999999999999999975532 3456677788742 111111100
Q ss_pred cCeecccChhhHHHHHHHHh--hCCCEEEEECCCc--------cCHHHHhhCCeeE
Q 005879 562 ADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGV--------NDAPALKKADIGI 607 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~--~~~~~v~~iGDg~--------ND~~al~~A~vgI 607 (672)
....-.|+-=..+++.++ ...+.++||||.. +|+.+-+.||+-.
T Consensus 105 --~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 --LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred --CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 011111222234455554 3456799999986 6999999887753
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.061 Score=54.21 Aligned_cols=87 Identities=14% Similarity=0.068 Sum_probs=57.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
.++-|++.+.++.|++.|+++.++|++.... +....+..|+...... .++.|
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lllr 171 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLLK 171 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEeC
Confidence 4567999999999999999999999998443 3355566787532111 11222
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhh
Q 005879 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~ 602 (672)
-....|..-.+.+.+....++++||..+|......
T Consensus 172 ~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 172 KDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFFY 206 (266)
T ss_pred CCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhhc
Confidence 11123444444454555679999999999976543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.071 Score=64.69 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=83.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+-|++.+.++.|+++|+++.++|+.....+....+..|+....+ ..++.+++.. ...-.|+-
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~~~-----------------~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADAFE-----------------NLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcccc-----------------cCCCCHHH
Confidence 56899999999999999999999999888888888888852111 1112111110 11222333
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE-Ecccc---cHHHhhccCEEEcCCChhHHHHHHH
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA---TDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI-amg~~---~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
=...++.++...+.+++|||..+|+.+-+.||+-. ++..+ .+.....+|+++.+-..-.+...+.
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 35566777766788999999999999999999843 33322 2223346788885543333444443
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.088 Score=52.72 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=60.0
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH--HHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhcc
Q 005879 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (672)
|.+.-.+.+-|++.+++++|+++|+++.++|........ ...+.+|+..+.. ..++.....
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~s~~~---------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIISSGEI---------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEccHHH----------------
Confidence 555666778899999999999999999999986654433 5567788753111 111111000
Q ss_pred CeecccChhhHHHHHHHHh---hCCCEEEEECCCccCHHHHhhCC
Q 005879 563 DGFAGVFPEHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKAD 604 (672)
Q Consensus 563 ~v~~~~~p~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~ 604 (672)
....+.+.++ ..+..+.++||+.+|...+..++
T Consensus 80 ---------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 ---------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0112222222 23567999999999999886544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.041 Score=49.12 Aligned_cols=93 Identities=9% Similarity=0.054 Sum_probs=58.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC-
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF- 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 569 (672)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+... ... .+...... .+.+...
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~-----~i~------------~l~~~f~~-~~~~~~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFG-----IIF------------PLAEYFDP-LTIGYWLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccc-----cch------------hhHhhhhh-hhhcCCCc
Confidence 57899999999999999999999999 7777767666665100 000 00000000 0011111
Q ss_pred -hhhHHHHHHHHh--hCCCEEEEECCCccCHHHHhh
Q 005879 570 -PEHKYEIVKRLQ--ARKHICGMTGDGVNDAPALKK 602 (672)
Q Consensus 570 -p~~K~~iv~~l~--~~~~~v~~iGDg~ND~~al~~ 602 (672)
|+-=..+++.++ ...+.++||||...|...++.
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 222245566666 567899999999999877653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.12 Score=49.09 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=34.1
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005879 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
.+.+.+.+|+++|++|+.+|.........+-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999986
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.075 Score=52.09 Aligned_cols=88 Identities=18% Similarity=0.226 Sum_probs=54.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
-|.-|++.++++.|++.|++|+++|||+... +..-.++.|++.. ....+.+..-. ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCCCC------------------Cc
Confidence 3677899999999999999999999999754 3344456677531 11111110000 00
Q ss_pred cChhhHHHHHHHHhhCCC-EEEEECCCccCHH
Q 005879 568 VFPEHKYEIVKRLQARKH-ICGMTGDGVNDAP 598 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~ 598 (672)
....-|...-+.+.+.|. +++.+||..+|..
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 001125555556666655 5778999999974
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.045 Score=57.53 Aligned_cols=100 Identities=10% Similarity=0.013 Sum_probs=61.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHH
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (672)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.- ....+......+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f---d~i~i~~~~~sd-------- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF---DEVLICPHFPED-------- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce---eeEEEeCCcCcc--------
Confidence 57899999999999999999999983 2334555666666631 111110000000
Q ss_pred HHhhccCeecccChhhH--HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 557 ~~~~~~~v~~~~~p~~K--~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
...++ .|... ..+.+.+......++||||+.+|..+-+.|++-...
T Consensus 99 ------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 ------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred ------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00111 22211 233333444457899999999999999999987544
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.071 Score=52.58 Aligned_cols=104 Identities=18% Similarity=0.145 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHH--HhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccc-ccccccCCCccHHHHhhccCeeccc
Q 005879 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG-QDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 492 ~~r~~~~~~I~~l--~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
|+.|+.+++++.+ ++.|+.+.++|--+......+.+.-|+..... .+++. ..++.. ....+.... .+-+.++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~-G~l~v~pyh--~h~C~~C 145 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTNPACFDAD-GRLRVRPYH--SHGCSLC 145 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeCCceecCC-ceEEEeCcc--CCCCCcC
Confidence 6788999999999 55899999999999988899999989853211 11111 001000 000000000 0223344
Q ss_pred Ch-hhHHHHHHHHhhC----C---CEEEEECCCccCHHHH
Q 005879 569 FP-EHKYEIVKRLQAR----K---HICGMTGDGVNDAPAL 600 (672)
Q Consensus 569 ~p-~~K~~iv~~l~~~----~---~~v~~iGDg~ND~~al 600 (672)
.| -=|..+++.+... | .+|.++|||.||....
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 33 3588888887764 3 6899999999997544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.026 Score=55.16 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHH--HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
++.|++.+.++.|+++|+++.++|+..... ........++.... ..++...+. -...-.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~-----------------~~~KP~ 154 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCLE-----------------GLRKPD 154 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeeec-----------------CCCCCC
Confidence 578999999999999999999999865432 22222223332110 011110000 011222
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
|+-=..+++.++...+.+++|||...|+.+-+.||+-..
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i 193 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTI 193 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 333345556666666789999999999999999998543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.058 Score=52.19 Aligned_cols=99 Identities=9% Similarity=-0.002 Sum_probs=62.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.++++.|+++|+++.++|.-+.......... .++... . ..++...+.. ...-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~~-----------------~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDLG-----------------MRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecccC-----------------CCCCCH
Confidence 3679999999999999999999999876544332211 222110 0 0111111100 112223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+-=..+++.++...+.+++|||...|+.+-+.||+-...
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 333556667766678899999999999999999986543
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.048 Score=53.69 Aligned_cols=97 Identities=12% Similarity=0.140 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.| ++++.++|+.+...+...-+..|+.... ...++.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4899999999888888877778875321 11122221110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
-=....+.+....+.+++|||+.+|+.+-+.||+.+..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33555666665667799999999999999999988764
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.18 Score=48.08 Aligned_cols=114 Identities=18% Similarity=0.189 Sum_probs=67.6
Q ss_pred CCCcchHHHHHHHHhCCC-cEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccc-cccccCCCccHHHHhhccCeecccC
Q 005879 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ-DKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
|+.|+..++|+.+++.|. .+.++|--|.-....+.+..|+.+-.. .+++.. ..+. --...+.... ..+-+.+ .
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~--~IfTNPa~~da-~G~L~v~pyH-~~hsC~~-C 158 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS--EIFTNPACVDA-SGRLLVRPYH-TQHSCNL-C 158 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH--HHhcCCcccCC-CCcEEeecCC-CCCccCc-C
Confidence 678999999999999997 899999988888888888877642100 000000 0000 0000000000 0011233 3
Q ss_pred hhh--HHHHHHHHhhC-------CCEEEEECCCccCH-HHHhhCCeeEEcc
Q 005879 570 PEH--KYEIVKRLQAR-------KHICGMTGDGVNDA-PALKKADIGIAVA 610 (672)
Q Consensus 570 p~~--K~~iv~~l~~~-------~~~v~~iGDg~ND~-~al~~A~vgIamg 610 (672)
|.+ |..+++.++.. -+++.++|||.||. |+++...--+||-
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 443 66666666543 24799999999994 6777777777773
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.11 Score=49.59 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=64.1
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
-|+ .+.++.|++. +++.++||.....+....+..|+.... ..++..++.. ..+..|+-=
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~ 148 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTF 148 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHH
Confidence 344 6899999865 899999999999999988989885321 1122211110 122233334
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
....+.++.....+++|||..+|+.+-+.||+-.
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 5566666666677999999999999999998754
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.13 Score=53.91 Aligned_cols=95 Identities=14% Similarity=0.049 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH----hCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
++.+++.++|+.|++.|+++.++|..+...+..+.+. +++..... ...+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~------------------------~~~~~~~ 86 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD------------------------ARSINWG 86 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee------------------------EEEEecC
Confidence 3468999999999999999999999999999988887 66542110 0000111
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005879 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
..|+.=..+++.+......++||||...|+.+.+.+...+.+-
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2233445566666666688999999999999999998876553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.3 Score=46.11 Aligned_cols=51 Identities=22% Similarity=0.334 Sum_probs=41.5
Q ss_pred EEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHH---HHHhCCC
Q 005879 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMG 532 (672)
Q Consensus 482 ~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~i---a~~~gi~ 532 (672)
.+-|.+.++|..-|++.+|++.|+.++.+|..+|.-..+.-..+ .+.+|++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 56799999999999999999999999999999987665544444 4456664
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.084 Score=44.91 Aligned_cols=89 Identities=15% Similarity=0.183 Sum_probs=54.1
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCCCCCCCCcccccccccccCCCccHHHHhhc
Q 005879 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (672)
|++...+++-|++.++|+.|+++|++++++|..+..+...++ +.+|+.-. +..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~--~~~---------------------- 62 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVD--EDE---------------------- 62 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGG----------------------
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCC--cCE----------------------
Confidence 445556778899999999999999999999987754433333 56777521 111
Q ss_pred cCeecccChhhHHHHHHHHhh--CCCEEEEECCCccCHHHHhhCCe
Q 005879 562 ADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVNDAPALKKADI 605 (672)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~--~~~~v~~iGDg~ND~~al~~A~v 605 (672)
++. |. ....+.|++ .+..|.++|.. .....++.+|+
T Consensus 63 --i~t---s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 63 --IIT---SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp --EEE---HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred --EEC---hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 111 11 233344444 47889999876 56666666653
|
... |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.54 Score=47.24 Aligned_cols=49 Identities=8% Similarity=-0.023 Sum_probs=40.8
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcC---CcHHHHHHHHHHhCCCC
Q 005879 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMGT 533 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~~ 533 (672)
|.+.-.+.+-|++.++|++|+++|++++++|| ++........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 55555667778999999999999999999996 77888888888888854
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.13 Score=48.91 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.+++.+++++|+ .+++++|+.+...+....+.+|+.... ..++...+.... .....-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 36689999999997 478999999988888888999885321 112211111000 000122333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
-=..+++.++...+.+++|||...|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 335666777767788999999999999999998754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.31 Score=45.41 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=75.8
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCc--EEEEcCC-------cHHHHHH
Q 005879 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 524 (672)
Q Consensus 454 ~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~--v~~~TGd-------~~~~a~~ 524 (672)
+.+.|.|.+.+=... ++. .-=++++.|+..+.+++|++.+.. ++++|.. ....|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL~--~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TLT--PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CCC--CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888774432 100 012567889999999999999875 9999986 3788999
Q ss_pred HHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhC-----CCEEEEECCC-ccCHH
Q 005879 525 TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDG-VNDAP 598 (672)
Q Consensus 525 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-----~~~v~~iGDg-~ND~~ 598 (672)
+.+.+|+.- -.+....|.-..++.+.++.+ .+.+++|||- ..|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999851 012334575566777877654 6789999998 46776
Q ss_pred HHhhCC
Q 005879 599 ALKKAD 604 (672)
Q Consensus 599 al~~A~ 604 (672)
|=...|
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 665554
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.22 Score=51.95 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=40.0
Q ss_pred EEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCC
Q 005879 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 532 (672)
Q Consensus 483 ~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~ 532 (672)
+=|.+.-.+.+-|++.++|+.|+++|++++++|+++..+...++ +.+|+.
T Consensus 35 ~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 35 CDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 33666666777899999999999999999999999966666655 456763
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.34 Score=47.72 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=76.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++.|++.+.++.|++.|+.+.++|+.+...+..+.+.+|+.... ...+.+.+.. -.+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 367899999999999999999999999999999999999986421 1111111111 123345
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
+-=...++.|.-....+++|.|+.|.+.|-++||.-+-.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 555777777777788999999999999999999987654
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.94 Score=47.51 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=43.7
Q ss_pred hHHHHHHHHhhC-C------CEEEEECCCccCHHHHhhC-----CeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQAR-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~-~------~~v~~iGDg~ND~~al~~A-----~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+|...++.+.+. + ..++++||...|-.||+.. |+||-+|.+.. ...|++.+. +-+.+...++
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCC--CHHHHHHHHH
Confidence 788888877654 1 2489999999999999853 67777774332 236888884 4666666664
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.29 Score=49.12 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=35.0
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CccCHHHHhh-CCeeEEccc
Q 005879 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKK-ADIGIAVAD 611 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~-A~vgIamg~ 611 (672)
.+|...++.|+ ..+.|++||| |.||.+||+. -=.|+++.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 57999999999 7889999999 8999999996 667888764
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.7 Score=46.07 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=57.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-|++.++++.|++. +++.++|..+.. .+..|+.... ..++...+.. ...-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF--EFVLRAGPHG-----------------RSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh--ceeEecccCC-----------------cCCCcHH
Confidence 4568999999999975 899999986543 1445653211 0111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEcc
Q 005879 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAVA 610 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIamg 610 (672)
-=...++.++...+.++||||+ ..|+.+-+.||+-....
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 2234455565556789999999 59999999999876554
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.56 Score=45.14 Aligned_cols=95 Identities=11% Similarity=0.064 Sum_probs=55.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--CCCcccccccccccCCCccHHHHhhccCeecccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
++.|++.++++.|++.+ +.+++|..+........+.+++.... .-..++.+.. ....
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~--------------------~~~k 132 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH--------------------DESK 132 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc--------------------Cccc
Confidence 36789999999999875 56677765444433344555553110 0011111110 0011
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhC--CeeEEc
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA--DIGIAV 609 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A--~vgIam 609 (672)
|+--..+++.++ .+.+++|||..+|+.+-++| |+-...
T Consensus 133 p~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 133 EKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred HHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 322233444444 35688999999999999999 986543
|
2 hypothetical protein; Provisional |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=90.66 E-value=1.9 Score=44.13 Aligned_cols=48 Identities=21% Similarity=0.228 Sum_probs=36.0
Q ss_pred EEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH---HHHHhCCC
Q 005879 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRLGMG 532 (672)
Q Consensus 485 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~---ia~~~gi~ 532 (672)
|.+.-.+.+-|++.++|++|+++|++++++|+++..+... -.+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 5555567777889999999999999999999976543333 33556764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=90.12 E-value=0.4 Score=47.44 Aligned_cols=88 Identities=20% Similarity=0.149 Sum_probs=54.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH---HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
.-|++.+.++.+++.|++|+.+|||+.. .+..-.++.|+... ....+.+.... -....
T Consensus 116 aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~~ 176 (229)
T PF03767_consen 116 AIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKSA 176 (229)
T ss_dssp EETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS---
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------ccccc
Confidence 3478999999999999999999999864 33334556676421 11111111100 00011
Q ss_pred hhhHHHHHHHHhhCC-CEEEEECCCccCHHH
Q 005879 570 PEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (672)
Q Consensus 570 p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~a 599 (672)
...|...-+.+.++| ++++.+||..+|..-
T Consensus 177 ~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 233677777787775 467789999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=88.92 E-value=2.5 Score=38.79 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=66.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH---HHHHHhCCCCCCCCCc-ccccccccccCCCccHHHHhhccCeec
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRLGMGTNMYPSS-ALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~---~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
|..++++.+..+.++++|++++-+|+|+...+. .......=.....|.. ++.. ...+...+. ..+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~s--------P~~l~~al~-rEvi~ 96 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLS--------PDSLFSALH-REVIS 96 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEEC--------Ccchhhhhh-ccccc
Confidence 689999999999999999999999999965443 3333330000011111 1111 000000000 01334
Q ss_pred ccChhhHHHHHHHHhhC-----CCEEEEECCCccCHHHHhhCCee
Q 005879 567 GVFPEHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~-----~~~v~~iGDg~ND~~al~~A~vg 606 (672)
+-.-+.|...++.++.. ....+.+|...+|+.+-+++|+-
T Consensus 97 ~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 97 KDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 43446788888888754 34678899999999999988765
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=88.92 E-value=1.7 Score=48.04 Aligned_cols=98 Identities=16% Similarity=0.049 Sum_probs=62.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCC------CCcccccccccccCCCccHHHHhhccCee
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMY------PSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
+++++.+ .+++.|. ++++|+-+...++.++++ +|++.-.- ....++|.... -
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 4555444 4556775 499999999999999987 89862100 11222221100 0
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005879 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
..+.-++|..-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0123456777666432111223789999999999999999999985
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.73 E-value=1.6 Score=42.92 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-+++.++++.+++. +++.++|.-.........+++|+... +......+. .....|.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~--------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED--------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc--------------------cccCCCC
Confidence 4568999999999998 99999998777777888889996432 111111110 1122233
Q ss_pred h--HHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCee-EEccccc---HHHhhccCEEEcCCChhHHHHHH
Q 005879 572 H--KYEIVKRLQARKHICGMTGDG-VNDAPALKKADIG-IAVADAT---DAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~--K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vg-Iamg~~~---~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
. =..+.+.+....+.+++|||+ .||+..-+.+|.- |-+.... .......|+.+ .++..+...+
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 2 255666666667889999997 6775666666664 3343221 11114556555 3355555444
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=86.76 E-value=0.91 Score=45.85 Aligned_cols=48 Identities=25% Similarity=0.337 Sum_probs=37.8
Q ss_pred EEeeccCC----CCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCC
Q 005879 485 GLMPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMG 532 (672)
Q Consensus 485 G~i~~~d~----~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~ 532 (672)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+.+|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 56666666 88999999999999999999999987654 44445567774
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=86.51 E-value=3.4 Score=41.49 Aligned_cols=31 Identities=13% Similarity=0.320 Sum_probs=27.1
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHH
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 520 (672)
+.|.-|++.+..+.+++.|++|+++|||...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3456689999999999999999999999854
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=85.45 E-value=0.96 Score=42.46 Aligned_cols=86 Identities=14% Similarity=0.037 Sum_probs=55.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++ ++.++|.-+........+..|+.... ..++.+++. -...-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 46789999998 36799998888888888888875321 011111110 01222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 603 (672)
-=....+.++...+.++||||+..|+.+-+.+
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 33566677776678899999999999876653
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=85.43 E-value=1.1 Score=45.22 Aligned_cols=118 Identities=14% Similarity=0.142 Sum_probs=68.1
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhh-----ccCeecccC
Q 005879 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE-----KADGFAGVF 569 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~ 569 (672)
++..++++.|++.|.++.++|+.............|+. .+-..+. ...++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999987643222111111110 0000000 001123333
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc-cccc---H---HHhhccCEEEcCCChhHHHHH
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV-ADAT---D---AARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam-g~~~---~---~~k~~ad~v~~~~~~~~i~~~ 635 (672)
|+-=..+++.++...+.++||||.. +|+.+-+.+|+--.. ..|. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 4433455566666678899999996 999999999886544 3331 1 1223478777 446555543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.29 E-value=0.9 Score=45.60 Aligned_cols=48 Identities=21% Similarity=0.318 Sum_probs=40.7
Q ss_pred EEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH---hCC
Q 005879 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR---LGM 531 (672)
Q Consensus 484 lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~---~gi 531 (672)
=|.+.-.+.+-|++.++|+.|+++|++++++|++...+...++++ +|+
T Consensus 9 DGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 9 DGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 366777788899999999999999999999999998777776665 466
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=85.25 E-value=1.5 Score=44.59 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.7
Q ss_pred CC-cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005879 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 493 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
+| |++.+++++|+++|+++.++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 45 999999999999999999999999888889999999974
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=84.23 E-value=6 Score=38.13 Aligned_cols=142 Identities=11% Similarity=0.125 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEE-----E-------eeccCCCCcchHHHHHHHHhCCCcE
Q 005879 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMG-----L-------MPLFDPPRHDSAETIRRALNLGVNV 511 (672)
Q Consensus 444 ~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG-----~-------i~~~d~~r~~~~~~I~~l~~~Gi~v 511 (672)
.+..+...+.+.+.|.|++++=+.. ++++ . ..+--.++|+.+.-+++|+++||++
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 4455566778899999999886543 3322 1 1111237999999999999999999
Q ss_pred EEEcCCcHHH---------------HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH---
Q 005879 512 KMITGDQLAI---------------GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK--- 573 (672)
Q Consensus 512 ~~~TGd~~~~---------------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--- 573 (672)
.++|=-.... +....+..+.........++...-++. -... .+ .-...-.|+.|
T Consensus 95 ~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~------p~~y-~~-~gl~KPdp~iK~yH 166 (219)
T PTZ00445 95 SVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQE------PSDY-RP-LGLDAPMPLDKSYH 166 (219)
T ss_pred EEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCC------hhhh-hh-hcccCCCccchHHH
Confidence 9999443322 122222222111100000000000000 0000 00 00112234553
Q ss_pred -HHHHHHHhhCCCEEEEECCCccCHHHHhhCCee
Q 005879 574 -YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 574 -~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 606 (672)
..+++..+...+.++++=|....+.+-+..|+-
T Consensus 167 le~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ 200 (219)
T PTZ00445 167 LKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYI 200 (219)
T ss_pred HHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCE
Confidence 345555555677899999999999998887654
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=84.17 E-value=2.8 Score=46.72 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=32.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH------------HHHHHHHHHhCCC
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 532 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~------------~~a~~ia~~~gi~ 532 (672)
+-|++.++|+.|+++|++++++|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999997554 3456677777764
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=83.77 E-value=5 Score=42.09 Aligned_cols=107 Identities=14% Similarity=0.088 Sum_probs=65.4
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh-C-------CCCCCCCCccccccc----------cc------cc
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G-------MGTNMYPSSALLGQD----------KD------ES 549 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~-g-------i~~~~~~~~~~~~~~----------~~------~~ 549 (672)
.|++.+.++.|+++|+++.++|+-+...+..+.+.+ | +.... +.++.+.. +. ..
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yF--D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYF--DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhC--cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 579999999999999999999999999999988886 6 22110 11111111 00 00
Q ss_pred CCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCC-ccCHHHHh-hCCee
Q 005879 550 IAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDG-VNDAPALK-KADIG 606 (672)
Q Consensus 550 ~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~-~A~vg 606 (672)
+....... +++..+|+.=+- ..+.+.++..+..|++|||. ..|+-.-+ .+|.-
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~ 318 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWR 318 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcE
Confidence 11111111 222334443332 45566677789999999998 46777665 55543
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=83.44 E-value=1.3 Score=39.27 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHH
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 521 (672)
+++.+++.++++.++++|+.++++|||+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 5678899999999999999999999998754
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.51 E-value=8.1 Score=36.48 Aligned_cols=25 Identities=8% Similarity=0.077 Sum_probs=22.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCC
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGD 517 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd 517 (672)
+.+++.++++.|+++|++++|+|.-
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ 56 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ 56 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC
Confidence 5689999999999999999999963
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=82.28 E-value=6 Score=39.20 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=66.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc--cC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--VF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 569 (672)
.+|+++.+.++.|++.+|++.+.|+-=-.....+.++-|...+.. .+......-. +...+ .-|.. .-
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv---~VvSN~M~Fd-~~g~l-------~gF~~~lIH 158 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV---KVVSNFMDFD-EDGVL-------VGFKGPLIH 158 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE---EEEEE-EEE--TTSBE-------EEE-SS---
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe---EEEeeeEEEC-CcceE-------eecCCCceE
Confidence 579999999999999999999999877777777777766543211 1111100000 00000 00000 00
Q ss_pred hhhHHH-------HHHHHhhCCCEEEEECCCccCHHHHhhC---CeeEEcc--ccc-H----HHhhccCEEEcCCChhHH
Q 005879 570 PEHKYE-------IVKRLQARKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-D----AARSASDIVLTEPGLSVI 632 (672)
Q Consensus 570 p~~K~~-------iv~~l~~~~~~v~~iGDg~ND~~al~~A---~vgIamg--~~~-~----~~k~~ad~v~~~~~~~~i 632 (672)
+-.|-. .-+.++ ....|+..||+.-|+.|-.-. +.-+.+| |.. + .-+++=|+|+.++.--.+
T Consensus 159 ~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v 237 (246)
T PF05822_consen 159 TFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDV 237 (246)
T ss_dssp TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HH
T ss_pred EeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchH
Confidence 111211 112222 245799999999999998666 4444455 433 2 234577999998764444
Q ss_pred HHHH
Q 005879 633 ISAV 636 (672)
Q Consensus 633 ~~~i 636 (672)
+..|
T Consensus 238 ~~~i 241 (246)
T PF05822_consen 238 PNAI 241 (246)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.54 E-value=12 Score=37.79 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=69.0
Q ss_pred EEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC----CCCCCCCCcccccccccccCCCccHHHH
Q 005879 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG----MGTNMYPSSALLGQDKDESIAALPIDEL 558 (672)
Q Consensus 483 ~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (672)
+=|++.--+.+=|++.++|+.|+++|++++.+|..+..+...+++++. ++.. +..+++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~--~~~i~T---------------- 76 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVT--PDDIVT---------------- 76 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCC--HHHeec----------------
Confidence 447888888899999999999999999999999887766664544432 2110 011110
Q ss_pred hhccCeecccChhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCC
Q 005879 559 IEKADGFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627 (672)
Q Consensus 559 ~~~~~v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~ 627 (672)
+. ....+.++++ +.+|.++| ...+.+.++.+|+-+.-.... + ..|+|+...
T Consensus 77 -----------S~--~at~~~l~~~~~~~kv~viG-~~~l~~~l~~~G~~~~~~~~~--~--~~d~Vv~g~ 129 (269)
T COG0647 77 -----------SG--DATADYLAKQKPGKKVYVIG-EEGLKEELEGAGFELVDEEEP--A--RVDAVVVGL 129 (269)
T ss_pred -----------HH--HHHHHHHHhhCCCCEEEEEC-CcchHHHHHhCCcEEeccCCC--C--cccEEEEec
Confidence 00 1222334433 36899999 445778899888777654211 1 156666543
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=80.54 E-value=13 Score=45.21 Aligned_cols=200 Identities=15% Similarity=0.133 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceE-E----EECCeEEEEeCCCCCCCcEEEEcCCCeecc
Q 005879 99 DFVGIITLLVINSTISFIEENNAGNAAAALMARL-----APKGK-V----LRDGRWNEQDASILVPGDIISIKLGDIIPA 168 (672)
Q Consensus 99 ~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~-V----~r~g~~~~i~~~~L~~GDiI~l~~G~~iPa 168 (672)
..+++++.++++.+.++.+++..++..+...+.. ..+.. + +.-|....+...|.+|.|.+.++ |+..-+
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~V 212 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLEI 212 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEEE
Confidence 3445556667778888888887776544332211 12211 1 23477899999999999999996 444556
Q ss_pred cEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHHH
Q 005879 169 DARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (672)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (672)
|=-.+.|++.-++-. .|+.. .-..|..+..|+...--...+.=+..|.=... +......+.-...+.+..+.+.
T Consensus 213 dES~LTGES~pv~K~--~~~~n--~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~~ 286 (941)
T TIGR01517 213 DESSITGESDPIKKG--APKDS--FLLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLIG 286 (941)
T ss_pred EecccCCCCCccccc--CCCCc--eEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHHH
Confidence 666666665323221 12221 12456777777643221111222222211100 0000011111223344444444
Q ss_pred HHHHHH---HHHHHHHHHHHH------------hhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHH
Q 005879 249 NFCICS---IAVGMIVEIIVM------------YPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (672)
Q Consensus 249 ~~~~~~---~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~ 305 (672)
.+.+.+ +++..++.++.. .......+..++..+++.+.+++|.++++++..+.....
T Consensus 287 ~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 287 KFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 332211 111111111110 001112344556677778889999999999888876544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 672 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-101 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 9e-38 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-37 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 6e-37 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 6e-37 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-21 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-21 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-21 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-21 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-17 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-17 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-10 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-04 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 3e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 2e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 4e-05 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-05 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 672 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-135 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-134 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 4e-71 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 9e-49 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-47 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-46 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-43 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 4e-31 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-29 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-28 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 5e-16 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 5e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 2e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 2e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 2e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 3e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 4e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 8e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 4e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 974 bits (2519), Expect = 0.0
Identities = 562/656 (85%), Positives = 607/656 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + ETVDLE IPIEEVF+ L+CSREGL++Q E+R+ IFG NKLEEKKESK LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANG G+PPDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDG+W+EQ+A+ILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLTAI
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GM++EIIVMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
ASR ENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID +G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL LA +D+ ++V ++IDK+AERGLRSLAVA Q VPE K+SPG PW+F+GL+
Sbjct: 424 GAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
++A++P++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVS 663
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 659
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 901 bits (2330), Expect = 0.0
Identities = 258/671 (38%), Positives = 394/671 (58%), Gaps = 33/671 (4%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKF 62
D + E + T + E++ + +R GL+S+ +R +G N+++E+KE+ F
Sbjct: 56 DGHDAEEEEEEATPGGGRVVPEDMLQT--DTRVGLTSEEVVQRRRKYGLNQMKEEKENHF 113
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 122
LKFLGF P+ +VME AA++A L DW DF I LL++N+ + F++E AG
Sbjct: 114 LKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAG 166
Query: 123 NAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP-LKID 181
+ L LA K VLRDG E +A +VPGDI+ ++ G IIPAD R++ D L++D
Sbjct: 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226
Query: 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHF 240
QSALTGESL V K GD V++ S K+GE V+ ATG +TF G+AA LV+ GHF
Sbjct: 227 QSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
+VL IG + + +++ + + + ++ L + I G+P+ +P V++ T
Sbjct: 287 TEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTT 345
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MA+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GVD +
Sbjct: 346 MAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPE 402
Query: 361 TVVLMAAQASRTENQ--DAIDAAIVGMLADPKEARAGIQE---VHFLPFNPTDKRTALTY 415
++L A A+ + + DAID A + L A++ + + + F PF+P K+
Sbjct: 403 DLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 416 IDNAGKMHRVSKGAPEQILNLAHNKS----DIERRVHAVIDKFAERGLRSLAVAYQEVPE 471
G+ KGAP +L ++++ + +FA RG RSL VA +
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-- 520
Query: 472 GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531
G W+ +G+MP DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 532 GTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTG 591
GTN+Y + L + + + + +E ADGFA VFP+HKY +V+ LQ R ++ MTG
Sbjct: 575 GTNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTG 633
Query: 592 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
DGVNDAP+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +
Sbjct: 634 DGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
Query: 652 YAVSITIRIVV 662
Y ++++I + +
Sbjct: 694 YRIALSIHLEI 704
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 420 bits (1082), Expect = e-135
Identities = 173/755 (22%), Positives = 314/755 (41%), Gaps = 125/755 (16%)
Query: 12 LKETVDLE--NIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKLEE-KKESKFLKFLG 67
LK+ V ++ + ++E+ GL++ A+E L+ G N L +++KF
Sbjct: 40 LKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCR 99
Query: 68 FMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIITLLVINSTISFIEENNA 121
++ S ++ AI+ + V + T++++ S+ +E +
Sbjct: 100 QLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKS 159
Query: 122 GNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181
+ + + V+RDG + +A +V GD++ +K GD IPAD R++ K+D
Sbjct: 160 SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVD 219
Query: 182 QSALTGESLPVTK-------GPGDG---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
S+LTGES P T+ P + + + C +G VV+ TG T G+ A L
Sbjct: 220 NSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLA 279
Query: 232 DTTN--------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLV 283
++ HF ++T + + I+ +I+ Y ++ ++
Sbjct: 280 SGLEVGRTPIAIEIEHFIHIITGV---AVFLGVSFFILSLILGYSW--------LEAVIF 328
Query: 284 ---LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
+++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 329 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 388
Query: 341 NKLTV-----DKNLIEV----------FTKGVDADTVVLMAAQ----ASRTENQ------ 375
N++TV D + E F K + + A A Q
Sbjct: 389 NRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPIL 448
Query: 376 ------DAIDAAIVGM----LADPKEARAGIQEVHFLPFNPTDKR--TALTYIDNAGKMH 423
DA ++A++ + R ++ +PFN T+K + ++ +
Sbjct: 449 KRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRY 508
Query: 424 RV-SKGAPEQILN-----LAHNK-----SDIERRVHAVIDKFAERGLRSLAVAYQEVPEG 472
+ KGAPE+IL+ L + D++ + G R L + +PE
Sbjct: 509 LLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPED 568
Query: 473 R--------KDSPGGPWQ---FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ--- 518
+ D P P F+GLM + DPPR + + + + G+ V M+TGD
Sbjct: 569 KYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 628
Query: 519 -LAIGKETG---------RRLGMGTNMYPSSALLGQDKDESI-----AALPIDELIEKAD 563
AI K G + N+ K + L + L +
Sbjct: 629 AKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILH 688
Query: 564 G-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAAR 617
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ + +D ++
Sbjct: 689 YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSK 748
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652
A+D++L + + I++ V R IF +K Y
Sbjct: 749 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 783
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 420 bits (1082), Expect = e-134
Identities = 178/763 (23%), Positives = 308/763 (40%), Gaps = 126/763 (16%)
Query: 4 KEEVLEAVLKET-VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEE-KKES 60
++E LE + KE ++ + + E+ + + S +GLS+ A E L G N L +
Sbjct: 38 RKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTP 97
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIITLLVINSTIS 114
+++KF + L +M AA + + + + +I ++V+
Sbjct: 98 EYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFG 157
Query: 115 FIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174
+ +E + N A+ + + V+RDG + +A LV GD++ +K GD +PAD R+L+
Sbjct: 158 YYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQ 217
Query: 175 GDPLKIDQSALTGESLPVTK-------GPGDG---VYSGSTCKQGEIEAVVIATGVHTFF 224
K+D S+LTGES P T+ P + + + C +G + +V+ TG T
Sbjct: 218 AQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTII 277
Query: 225 GKAAHLVDTTN--------QVGHFQKVLTAIGNFCICSIAVGM-IVEIIVMYPIQDREYR 275
G+ A L ++ HF ++ + IV + + Y
Sbjct: 278 GRIASLASGVENEKTPIAIEIEHFVDIIAGL----AILFGATFFIVAMCIGYTF------ 327
Query: 276 PGIDNLLV---LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 332
+ ++ +++ +P + ++V +++ + RL+ + + K + A+E + V+CS
Sbjct: 328 --LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICS 385
Query: 333 DKTGTLTLNKLTV-----DKNLIEV----------FTKGVDADTVVLMAAQ----ASRTE 373
DKTGTLT N++TV D ++ F + + + A+
Sbjct: 386 DKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKS 445
Query: 374 NQ------------DAIDAAIVGM----LADPKEARAGIQEVHFLPFNPTDKR--TALTY 415
Q DA + A++ L + R +V +PFN T+K + T
Sbjct: 446 GQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTL 505
Query: 416 IDNAGKMHRV-SKGAPEQILN-----LAHNK-----SDIERRVHAVIDKFAERGLRSLAV 464
D H + KGAPE++L L + G R L
Sbjct: 506 EDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGF 565
Query: 465 AYQEVPEGRKDSPGGPWQ-----------FMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513
+ E F GL+ + DPPR + + + G+ V M
Sbjct: 566 CQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIM 625
Query: 514 ITGDQ----LAIGKETG--------RRLGMGTNMYPSSALLGQDKDES------IAALPI 555
+TGD AI G P + +D + +
Sbjct: 626 VTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDP 685
Query: 556 DELIEKADG-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+
Sbjct: 686 SELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMG 745
Query: 611 DA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652
A +DAA++A+D++L + + I++ V R IF +K Y
Sbjct: 746 IAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAY 788
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 4e-71
Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 36/360 (10%)
Query: 22 PIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVMEA 79
EE S GL+ + L +G+N+L E+ +S + + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 80 AAIMAIALA---NGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKG 136
AA ++ LA G + + I+ +L+ N+ + +E NA NA AL G
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 137 KVLRDGRWNEQ--DASILVPGDIISIKLGDIIPADARLL--EGDPLKIDQSALTGESLPV 192
KV R R + Q A +VPGDI+ + +GD +PAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 193 TKGP----------GDG---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN---- 235
K D ++SG+ G+ +V TGV T GK + T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 236 ----QVGHFQKVLT-AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLV---LLIG 287
++ F + L+ I C+ + + ++ R I + L +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH--GGSWIRGAIYYFKIAVALAVA 306
Query: 288 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK 347
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++V K
Sbjct: 307 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 9e-49
Identities = 91/328 (27%), Positives = 148/328 (45%), Gaps = 42/328 (12%)
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
+ + + + + + A R +++ L F+ K + Y A
Sbjct: 447 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMS-VYCSPAKSS 505
Query: 423 HRVS------KGAPEQILNLAHNK----------SDIERRVHAVIDKF--AERGLRSLAV 464
KGAPE +++ + ++ ++ +VI ++ LR LA+
Sbjct: 506 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 565
Query: 465 AYQEVPEGRKDSPGGPWQ----------FMGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514
A ++ P R++ F+G++ + DPPR + +I+ + G+ V MI
Sbjct: 566 ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMI 625
Query: 515 TGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG---FAG 567
TGD +AI + G + A G++ LP+ E E FA
Sbjct: 626 TGDNKGTAIAICRRIG--IFGENEEVADRAYTGRE----FDDLPLAEQREACRRACCFAR 679
Query: 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627
V P HK +IV+ LQ+ I MTGDGVNDAPALKKA+IGIA+ T A++AS++VL +
Sbjct: 680 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADD 739
Query: 628 GLSVIISAVLTSRAIFQRMKNYTIYAVS 655
S I++AV RAI+ MK + Y +S
Sbjct: 740 NFSTIVAAVEEGRAIYNNMKQFIRYLIS 767
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 176 bits (450), Expect = 3e-47
Identities = 133/545 (24%), Positives = 211/545 (38%), Gaps = 111/545 (20%)
Query: 120 NAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ L K V+RDG+ + GDI+ ++ G+ IP D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 179 KIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFF------------GK 226
+D+S ++GE +PV K GD V+ + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 227 A--AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVL 284
L D V +F + T + +A I I Y I L+ +
Sbjct: 315 PPIQRLADKV--VAYF--IPTVLL------VA---ISAFIYWYFIAHAPLLFAFTTLIAV 361
Query: 285 LIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
L+ P A PT L+V G + ++ G + K A+E + + DKTGTLT
Sbjct: 362 LVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTK 417
Query: 341 NKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTENQDAIDAAIVGMLADPKEARAGIQEV 399
K V ++ D ++ +AA A R+E+ A AIV K+A
Sbjct: 418 GKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE----- 460
Query: 400 HFLPFNPTDKRTALTYIDNAGK---MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAE 456
H + +K + G+ + G + + V ++K
Sbjct: 461 HGIELGEPEKVEVIA-----GEGVVADGILVGNKRL---MEDFGVAVSNEVELALEKLER 512
Query: 457 RGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITG 516
++ VA + G++ + D + + ++ +G+ V MITG
Sbjct: 513 EAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 559
Query: 517 DQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEI 576
D + R L +D +I A V P K E
Sbjct: 560 DNWRSAEAISRELN------------------------LDLVI------AEVLPHQKSEE 589
Query: 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
VK+LQA K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +++A+
Sbjct: 590 VKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 648
Query: 637 LTSRA 641
SR
Sbjct: 649 QLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 171 bits (437), Expect = 7e-46
Identities = 132/548 (24%), Positives = 214/548 (39%), Gaps = 105/548 (19%)
Query: 120 NAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ L K V+RDG+ + GDI+ ++ G+ IP D ++EG+
Sbjct: 119 RTGEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 179 KIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFF------------GK 226
+D+S ++GE +PV K GD V+ + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 227 A--AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVL 284
L D V +F + T + +A I I Y I L+ +
Sbjct: 237 PPIQRLADKV--VAYF--IPTVLL------VA---ISAFIYWYFIAHAPLLFAFTTLIAV 283
Query: 285 LIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 284 LVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLTK 339
Query: 341 NKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTENQDAIDAAIVGMLADPKEARAGIQEV 399
K V ++ D ++ +AA A R+E+ A AIV K+A
Sbjct: 340 GKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE----- 382
Query: 400 HFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGL 459
H + +K + + G + + V ++K
Sbjct: 383 HGIELGEPEKVEVIAGEGVVAD--GILVGNKRL---MEDFGVAVSNEVELALEKLEREAK 437
Query: 460 RSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 519
++ VA + G++ + D + + ++ +G+ V MITGD
Sbjct: 438 TAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNW 484
Query: 520 AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579
+ R L +D +I A V P K E VK+
Sbjct: 485 RSAEAISRELN------------------------LDLVI------AEVLPHQKSEEVKK 514
Query: 580 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639
LQA K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +++A+ S
Sbjct: 515 LQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLS 573
Query: 640 RAIFQRMK 647
R ++K
Sbjct: 574 RKTMSKIK 581
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 1e-43
Identities = 133/556 (23%), Positives = 211/556 (37%), Gaps = 120/556 (21%)
Query: 122 GNAAAALMARLAPK--GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLK 179
G+A AL+ +L P+ ++ DG E + GD++ ++ G+ IP D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 180 IDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFG------------KA 227
+D+S +TGE +PV K V + + G + G T +A
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 228 --AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLL 285
L DT G F V I +AV + I+ G+ + +L
Sbjct: 331 PIQRLADTV--SGWF--VPAVIL------VAV--LSFIVWALLGPQPALSYGLIAAVSVL 378
Query: 286 IGGIPIAMP------TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
I IA P T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT
Sbjct: 379 I----IACPCALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT 432
Query: 340 LNKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTENQDAIDAAIVGMLADPKEARAGIQE 398
+ + T D + +AA ++E+ A AIV A+
Sbjct: 433 EGHPKL----TRIVTDDFVEDNALALAAALEHQSEHPLA--NAIV------HAAKE---- 476
Query: 399 VHFLPFNPTDKRTALT------YIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVID 452
L + A T +D H V+ G + + + + + D
Sbjct: 477 -KGLSLGSVEAFEAPTGKGVVGQVDG----HHVAIGNARLMQEHGGDNAPLFEK----AD 527
Query: 453 KFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVK 512
+ +G + +A + + L+ + DP + + ETI G+ +
Sbjct: 528 ELRGKGASVMFMAVDG-------------KTVALLVVEDPIKSSTPETILELQQSGIEIV 574
Query: 513 MITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572
M+TGD + LG I +++ A + PE
Sbjct: 575 MLTGDSKRTAEAVAGTLG------------------------IKKVV------AEIMPED 604
Query: 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632
K IV L+ + I M GDGVNDAPAL KADIGIA+ TD A ++ + L L I
Sbjct: 605 KSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGI 664
Query: 633 ISAVLTSRAIFQRMKN 648
A S + M N
Sbjct: 665 AKARRLSEST---MSN 677
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 4e-31
Identities = 77/339 (22%), Positives = 125/339 (36%), Gaps = 79/339 (23%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTEN 374
+ A E + + DKTGTLT + V ++ D ++ +AA +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 375 QDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT------YIDNAGKMHRVSKG 428
A AAIV +EA ++ A+ ++ R
Sbjct: 58 PIA--AAIV------EEAEK-----RGFGLTEVEEFRAIPGKGVEGIVNG----RRYMVV 100
Query: 429 APEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMP 488
+P + + ++K ++G + + + G++
Sbjct: 101 SPGY---IRELGIKTD----ESVEKLKQQGKTVVFILKNG-------------EVSGVIA 140
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 548
L D R +S E I + +G+ M+TGD + K LG
Sbjct: 141 LADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------------ 182
Query: 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
+D+ A V P K E VK +Q + M GDGVNDAPAL +AD+GIA
Sbjct: 183 ------LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIA 229
Query: 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+ TD A +DIVL + + V SR + +
Sbjct: 230 IGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 117 bits (297), Expect = 1e-29
Identities = 86/346 (24%), Positives = 135/346 (39%), Gaps = 81/346 (23%)
Query: 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQA 369
+ G + K A+E + + DKTGTLT K V ++ D ++ +AA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 370 -SRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGK---MHRV 425
R+E+ A AIV K+A H + +K + G+ +
Sbjct: 71 ERRSEHPIA--EAIV------KKALE-----HGIELGEPEKVEVIA-----GEGVVADGI 112
Query: 426 SKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMG 485
G + + V ++K ++ VA GR G
Sbjct: 113 LVGNKRL---MEDFGVAVSNEVELALEKLEREAKTAVIVAR----NGR---------VEG 156
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSAL 541
++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 157 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN--------------- 201
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
+D +I A V P K E VK+LQA K + GDG+NDAPAL
Sbjct: 202 -------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALA 241
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 242 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-28
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 30/166 (18%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
I E + + PE K I+++L+ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 5e-16
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 124 AAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
A L+ L K V+RDG+ + GDI+ ++ G+ IP D ++EG+ +D+
Sbjct: 2 AIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGV 220
S ++GE +PV K GD V+ + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 3e-14
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 120 NAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVP------GDIISIKLGDIIPADARL 172
A A L++ L ++ N + V GDII + G P D R+
Sbjct: 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 173 LEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGV 220
+EG +D+S +TGE++PV K PG V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 9e-13
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 17/157 (10%)
Query: 356 GVDADTVVLMAAQASRTENQ--DAIDAAIV--GMLADPKEARAGIQEVHFLPFNPTDKRT 411
G ++ V+ A S + + +D A++ + + Q++ +PF+ +R
Sbjct: 12 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRM 71
Query: 412 ALTYIDNAGKMHRVSKGAPEQILN-----LAHNK-----SDIERRVHAVIDKFAERGLRS 461
++ +N V KGA ++ILN + + + R++ V D +GLR
Sbjct: 72 SVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRV 131
Query: 462 LAVAYQEVPEGRKDSPGGPWQ---FMGLMPLFDPPRH 495
+AVA + +P D G + D H
Sbjct: 132 VAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 3e-09
Identities = 78/561 (13%), Positives = 153/561 (27%), Gaps = 178/561 (31%)
Query: 2 GDKEEVLEAVLKETVDLENIP--IEEVFENLRCSREGLSSQAAEERLS-IFGYNKLEEKK 58
D V E + D +++ + + + S+ A +F L K+
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-DHIIMSKDAVSGTLRLFW--TLLSKQ 75
Query: 59 ESKFLKFLGFMWNP-LSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIE 117
E KF+ + ++M + +P T +IE
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSP-------IKTEQRQPSM--------------MTRMYIE 114
Query: 118 ENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP 177
+ RD +N D + ++ +RL P
Sbjct: 115 Q---------------------RDRLYN--DNQVFAKYNV------------SRL---QP 136
Query: 178 LKIDQSALTGESLPVTKGPGDGVY----SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDT 233
+ AL L + + SG T + V ++ V ++
Sbjct: 137 YLKLRQAL----LELRPAKNVLIDGVLGSGKTWVALD---VCLSYKVQCKMDFKIFWLN- 188
Query: 234 TNQVGHFQK---VLTAIGNFC------ICSIAVGMIVEIIVMYPIQDR-----EYRPGID 279
+ + VL + S + + ++ IQ + +P +
Sbjct: 189 ---LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245
Query: 280 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
LLVLL + + + L +T R + D L + T ++
Sbjct: 246 CLLVLL----NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHIS 290
Query: 340 LNK----LTVDKNLIEVFTK--GVDADT------------VVLMAAQ----ASRTEN--- 374
L+ LT D+ + K + ++A + +N
Sbjct: 291 LDHHSMTLTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
Query: 375 --QDAIDAAIVGMLA--DPKEARAGIQEVHFLPFN---PTDKRTAL----TYIDNAGKMH 423
D + I L +P E R + P + PT + + D
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD------ 403
Query: 424 RVSKGAPEQILNLAHNKSDIERR-------VHAVIDKFA-----ERGL-RSLAVAYQEVP 470
++N H S +E++ + ++ + E L RS+ Y
Sbjct: 404 ------VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 471 EGRKDSPGGPW------QFMG 485
D P+ +G
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIG 478
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 3e-06
Identities = 46/334 (13%), Positives = 91/334 (27%), Gaps = 93/334 (27%)
Query: 425 VSKGAPEQILNLAHNKSD-------IERRVHAVIDKFAERGLRS----LAVAYQEVPEGR 473
+SK + I+ S + + ++ KF E LR L +
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ- 104
Query: 474 KDSPGGPWQ--------FMGLMPLFDP---PRHDSAETIRRAL-----NLGVNVK-MI-T 515
P + +F R +R+AL V + ++ +
Sbjct: 105 ---PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS 161
Query: 516 GDQ-LAIG--KETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572
G +A+ + M ++ + L + +L+ + D +H
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 573 KYEI----------VKRLQARKH--ICGMTGDGVNDAPALKKADIG---------IAVAD 611
I ++RL K C + V +A A ++ V D
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 612 ATDAAR----------------------------SASD----IVLTEPGLSVIISAVLTS 639
AA D ++ T P II+ +
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339
Query: 640 R-AIFQRMKNYTIYAVSITIRIVVSGSLDFSNNR 672
A + K+ ++ I ++ L+ + R
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLN-VLEPAEYR 372
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 5e-06
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K V + + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 627 PG 628
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K +K+ + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 627 PG 628
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+K L + I GD + D P ++K + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 627 PG 628
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-05
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K EI ++++ + + G GD V D +KK +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 627 PG 628
G
Sbjct: 143 NG 144
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-05
Identities = 29/132 (21%), Positives = 42/132 (31%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
I A N G+ V ++TG++ I + +L +D L +
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLK------------------------VDYLFQ 75
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
K + L I GD +NDA LK+ I A A
Sbjct: 76 GV--------VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYI 127
Query: 617 RSASDIVLTEPG 628
R S I L + G
Sbjct: 128 RRLSTIFLEKRG 139
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
I+ ++ + V +++G I + LG I
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLG------------------------IKLF-- 77
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
F G K L + + GD D PA AVADA
Sbjct: 78 ----FLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYV 131
Query: 617 RSASDIVLTEPG 628
++A D VL+ G
Sbjct: 132 KNAVDHVLSTHG 143
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K + L+ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 627 PG 628
G
Sbjct: 153 TG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
IR + ++V +ITG + + ++ LG I L
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLG------------------------ITHL-- 118
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
+ G K L A GD + D P + + + +AVADA
Sbjct: 119 ----YQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLL 172
Query: 617 RSASDIVLTEPG 628
+ V G
Sbjct: 173 LPKAHYVTRIKG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-05
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
I+ + GV +I+G + AI + + LG I+ L
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLG------------------------IEHL-- 88
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
F G E K ++ +L A + GD + D P +++ +G+AVA+A
Sbjct: 89 ----FQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFV 142
Query: 617 RSASDIVLTEPG 628
R + + G
Sbjct: 143 REHAHGITRAQG 154
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-05
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
++ +N G+ + +ITG + + R+ AL I +
Sbjct: 61 VKALMNAGIEIAIITGRR---SQIVENRM---------------------KALGISLI-- 94
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
+ G + K + + + I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 617 RSASDIVLTEPG 628
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 18/110 (16%), Positives = 29/110 (26%), Gaps = 6/110 (5%)
Query: 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL 558
E + + +I+G + +Y + A D
Sbjct: 84 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 143
Query: 559 IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
G K ++ L M GD V D A K +D+ A
Sbjct: 144 CSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 624 LTEPGLSVII 633
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ K EI++++ + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 624 LTEPGLSVII 633
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
V + K +I+ L + + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 624 LTEPGLSVII 633
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ +K + + L AR +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 624 LTEPGLSVII 633
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 672 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.96 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.96 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.95 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.95 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.84 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.51 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.43 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.42 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.42 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.37 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.36 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.34 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.33 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.32 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.32 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.31 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.29 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.27 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.26 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.25 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.25 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.24 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.17 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.16 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.15 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.08 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.03 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.02 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.01 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.01 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.01 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.99 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.96 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.94 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.94 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.93 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.9 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.9 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.87 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.87 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.86 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.83 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.82 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.79 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.76 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.72 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.71 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.7 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.69 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.68 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.68 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.64 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.63 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.62 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.57 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.56 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.52 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.51 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.51 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.48 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.48 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.48 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.47 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.47 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.46 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.44 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.44 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.42 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.41 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.4 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.4 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.4 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.39 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.39 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.38 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.37 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.36 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.32 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.32 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.31 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.3 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.28 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.26 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.25 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.25 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.24 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.23 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.23 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.22 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.22 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.22 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.21 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.21 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.2 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.17 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.11 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.09 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.07 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.99 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.99 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.99 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.92 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.9 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.88 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.87 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.85 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.84 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.79 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.71 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.71 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.7 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.62 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.6 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.59 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.55 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.48 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.46 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.42 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.4 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.37 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.25 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.1 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.95 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.92 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.89 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.87 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.84 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.77 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.74 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.69 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.52 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 96.37 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.05 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.04 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.92 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.76 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.71 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.73 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 94.66 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 93.76 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 93.49 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 93.16 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 93.1 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 91.4 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 90.26 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 87.43 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 85.52 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 85.35 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 83.33 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 80.3 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-118 Score=1036.04 Aligned_cols=654 Identities=86% Similarity=1.286 Sum_probs=581.9
Q ss_pred HHHhhcccccccCCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005879 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (672)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 87 (672)
.++..++..+||.++.+|+++.|+++.+|||++|+++|+++||+|+++.+++++|..|+++|++|+.|+|++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l 83 (885)
T 3b8c_A 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIAL 83 (885)
T ss_dssp --------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGS
T ss_pred hhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777899999999999999999999999999999999999999988888888899999999999999999999887
Q ss_pred hcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeec
Q 005879 88 ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIP 167 (672)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iP 167 (672)
+...+.+..|.+++.|+++++++.++++++++++++++++|+++.+++++|+|||++++|++++|+|||+|.|++||+||
T Consensus 84 ~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IP 163 (885)
T 3b8c_A 84 ANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIP 163 (885)
T ss_dssp SCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCS
T ss_pred HhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEe
Confidence 65445556888988888888999999999999999999999988899999999999999999999999999999999999
Q ss_pred ccEEEEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHH
Q 005879 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247 (672)
Q Consensus 168 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (672)
|||+|++|+++.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|++.+++++..+++++++.++++
T Consensus 164 aDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i 243 (885)
T 3b8c_A 164 ADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243 (885)
T ss_dssp SCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHH
T ss_pred eceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999988777788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCc
Q 005879 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (672)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v 327 (672)
+.+++..+++++++..++.|.+.+.+|..++..++++++++|||+||++++++++.++.+|+++|+++|++.++|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v 323 (885)
T 3b8c_A 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 323 (885)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCC
Confidence 88755444433333333334444567888899999999999999999999999999999999999999999999999999
Q ss_pred cEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCC
Q 005879 328 DVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPT 407 (672)
Q Consensus 328 ~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~ 407 (672)
|+||||||||||+|+|+|.+..++.+..+.++++++.+++.++...+.||++.|++.+..++...+.+++.++.+||+|.
T Consensus 324 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~ 403 (885)
T 3b8c_A 324 DVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPV 403 (885)
T ss_dssp CCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTT
T ss_pred CEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcc
Confidence 99999999999999999986443334445677788888777776557889999999987765445566788889999999
Q ss_pred CceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEe
Q 005879 408 DKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487 (672)
Q Consensus 408 ~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i 487 (672)
+++|++.++..+|+.+.++||+||.++++|+.+.+.++.+.+.+++|+++|+||+++|++++++.+.+..|.+++|+|++
T Consensus 404 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli 483 (885)
T 3b8c_A 404 DKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483 (885)
T ss_dssp TCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEE
T ss_pred cceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEE
Confidence 99999887766788888999999999999986555566788889999999999999999998877777788899999999
Q ss_pred eccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 488 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
+++||+||+++++|++|+++||+++|+|||+..+|.++|+++||..+..+...+.|.+.+..++..++++.+++..+|+|
T Consensus 484 ~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ar 563 (885)
T 3b8c_A 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAG 563 (885)
T ss_dssp EECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEEC
T ss_pred EeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEE
Confidence 99999999999999999999999999999999999999999999765555567777777766778889999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHH
Q 005879 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~ 647 (672)
++|+||.++|+.+|++|+.|+|+|||.||+|||+.||+|||||+|++.+|++||+|+.+++++++.+++++||++|+||+
T Consensus 564 v~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~ 643 (885)
T 3b8c_A 564 VFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 643 (885)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHH
Q 005879 648 NYTIYAVSITIRIV 661 (672)
Q Consensus 648 ~~i~~~~~~n~~~~ 661 (672)
+|+.|++++|+..+
T Consensus 644 ~~i~~~l~~n~~~~ 657 (885)
T 3b8c_A 644 NYTIYAVSITIRIV 657 (885)
T ss_dssp HHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-109 Score=960.66 Aligned_cols=611 Identities=42% Similarity=0.708 Sum_probs=534.6
Q ss_pred HHcCCC-CCCCCHHHHHHHHHhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHH
Q 005879 28 ENLRCS-REGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITL 106 (672)
Q Consensus 28 ~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ii~~ 106 (672)
+.|+++ .+|||++|+++|+++||+|+++.+++++|..|+++|++|++++++++++++++++ .|.+++.|+++
T Consensus 78 ~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~v 150 (920)
T 1mhs_A 78 DMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICGL 150 (920)
T ss_dssp TTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHHH
T ss_pred HHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHHH
Confidence 457776 6899999999999999999999888888999999999999999999998887753 78888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCC-eEEeccCc
Q 005879 107 LVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP-LKIDQSAL 185 (672)
Q Consensus 107 v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~-l~Vdes~L 185 (672)
++++.++++++++++++++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ +.||||+|
T Consensus 151 v~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~L 230 (920)
T 1mhs_A 151 LLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSAL 230 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeecccc
Confidence 89999999999999999999999888999999999999999999999999999999999999999999996 89999999
Q ss_pred CCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 186 TGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEII 264 (672)
Q Consensus 186 TGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 264 (672)
||||.|+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|++.++++++ .+++++++.+++++.++++++++.+++.++
T Consensus 231 TGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~ 310 (920)
T 1mhs_A 231 TGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWV 310 (920)
T ss_dssp SSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999877 567899999999988766554444333333
Q ss_pred HHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccc
Q 005879 265 VMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT 344 (672)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~ 344 (672)
. +.+.+.+|...+..++++++++|||+||++++++++.++.+|+++|+++|++.++|+||++|+||||||||||+|+|+
T Consensus 311 ~-~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~ 389 (920)
T 1mhs_A 311 S-SFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLS 389 (920)
T ss_dssp T-TTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSC
T ss_pred H-HHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCcccccee
Confidence 2 223345677778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEecccCCChHHHHHHHHHccccccc--chHHHHHHhhcCC---hHHHhcccceEEEecCCCCCceEEEEEEeCC
Q 005879 345 VDKNLIEVFTKGVDADTVVLMAAQASRTENQ--DAIDAAIVGMLAD---PKEARAGIQEVHFLPFNPTDKRTALTYIDNA 419 (672)
Q Consensus 345 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ai~~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~ 419 (672)
|.+++. ..+.++++++..++.++...+. ||++.|++.+... .......++.++.+||++.+|+|++++...+
T Consensus 390 v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~ 466 (920)
T 1mhs_A 390 LHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQ 466 (920)
T ss_dssp CCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSS
T ss_pred EEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCC
Confidence 988642 1244555665555554443333 8999999885421 1122346788999999999999999887667
Q ss_pred CeEEEEEcCcHHHHHHhccC----ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCCc
Q 005879 420 GKMHRVSKGAPEQILNLAHN----KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRH 495 (672)
Q Consensus 420 ~~~~~~~KGa~e~i~~~~~~----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~ 495 (672)
|+.+.++||+|+.++++|+. +.+.++.+.+.+++|+++|+||+++||+. .|.+++|+|+++++||+||
T Consensus 467 g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R~ 538 (920)
T 1mhs_A 467 GERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPRH 538 (920)
T ss_dssp SSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCCH
T ss_pred CcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEeccccc
Confidence 88889999999999999975 23456678889999999999999999984 2567899999999999999
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005879 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 496 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
+++++|+.|+++||+++|+|||++.+|.++|+++||..+.. ....+.|. ..++..++.+.+++..+|+|++|+||
T Consensus 539 ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~K 615 (920)
T 1mhs_A 539 DTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQHK 615 (920)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTHH
T ss_pred cHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHHH
Confidence 99999999999999999999999999999999999974321 12233443 23455667777788899999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 653 (672)
.++|+.||+.|+.|+|+|||.||+|||+.||+|||||+|++.+|++||+|+++++++++.+++++||++|+||++++.|.
T Consensus 616 ~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~ 695 (920)
T 1mhs_A 616 YNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYR 695 (920)
T ss_dssp HHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHH
Q 005879 654 VSITIRI 660 (672)
Q Consensus 654 ~~~n~~~ 660 (672)
++.|+..
T Consensus 696 l~~n~~~ 702 (920)
T 1mhs_A 696 IALSIHL 702 (920)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-107 Score=964.46 Aligned_cols=660 Identities=25% Similarity=0.376 Sum_probs=553.2
Q ss_pred hHHHHHhhcc-cccccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHH
Q 005879 5 EEVLEAVLKE-TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAA 81 (672)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 81 (672)
+.++++++.| ..+||.++.+|+++.|+++ .+|||++|+++|+++||+|+++.++. ++|..|++||++|+.+++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa 118 (1034)
T 3ixz_A 39 KEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAA 118 (1034)
T ss_pred hhhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHH
Confidence 4677888888 4489999999999999999 58999999999999999999988764 6677899999999999999999
Q ss_pred HHHHHHhc---CC---CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCC
Q 005879 82 IMAIALAN---GG---GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPG 155 (672)
Q Consensus 82 ~l~~~~~~---~~---~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~G 155 (672)
+++++... .. .....|+++++|+++++++.+++++||+++++++++|+++.+++++|+|||++++|++++|+||
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~G 198 (1034)
T 3ixz_A 119 AICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVG 198 (1034)
T ss_pred HHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCC
Confidence 88877542 11 1123567778888888999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCC----------CcceeceeeeeCceEEEEEEecccccch
Q 005879 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG----------DGVYSGSTCKQGEIEAVVIATGVHTFFG 225 (672)
Q Consensus 156 DiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~----------~~v~aGt~v~~g~~~~~V~~tG~~T~~g 225 (672)
|+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|
T Consensus 199 DiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~G 278 (1034)
T 3ixz_A 199 DLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIG 278 (1034)
T ss_pred cEEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhh
Confidence 999999999999999999998889999999999999999875 5689999999999999999999999999
Q ss_pred hhhhhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHH
Q 005879 226 KAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304 (672)
Q Consensus 226 ~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~ 304 (672)
++.+++... .+++++++.++++..++..+++++.++.+++ +...+.+|...+..++++++++|||+||++++++++++
T Consensus 279 kI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~ 357 (1034)
T 3ixz_A 279 RIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIV-AMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357 (1034)
T ss_pred HHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHH
Confidence 999988876 6778999999999877654443333332322 33345677788888999999999999999999999999
Q ss_pred HHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccC-----------C--Ch---HHHHHHHHH
Q 005879 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG-----------V--DA---DTVVLMAAQ 368 (672)
Q Consensus 305 ~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-----------~--~~---~~~~~~~~~ 368 (672)
+.||+++|++||++.++|+||++++||||||||||+|+|+|.++++...... . .. ..++..++.
T Consensus 358 ~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 437 (1034)
T 3ixz_A 358 AKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTL 437 (1034)
T ss_pred HHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988664321100 0 00 123333333
Q ss_pred cccc---------------cccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeC---CCeEEEEE
Q 005879 369 ASRT---------------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRVS 426 (672)
Q Consensus 369 ~~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~~~~~~~~ 426 (672)
++.. ..++|.+.|++.+.. +....+..++.+..+||+|.+|+|+.++... ++++++++
T Consensus 438 c~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~ 517 (1034)
T 3ixz_A 438 CNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVM 517 (1034)
T ss_pred hccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEE
Confidence 3211 124688888876642 3334466788999999999999998776642 36789999
Q ss_pred cCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCeEEEE
Q 005879 427 KGAPEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQFMG 485 (672)
Q Consensus 427 KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-----------~~~e~~l~~lG 485 (672)
|||||.|+++|+. +.+.++.+.+..++|+.+|+||+++||+.++..+. +..|.+|+|+|
T Consensus 518 KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 597 (1034)
T 3ixz_A 518 KGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAG 597 (1034)
T ss_pred eCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEE
Confidence 9999999999973 23456778899999999999999999999875431 23478999999
Q ss_pred EeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------Cccccc
Q 005879 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLG 543 (672)
Q Consensus 486 ~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~ 543 (672)
+++++||+|++++++|++|+++||+++|+|||++.+|..+|+++|+..+... ...+.|
T Consensus 598 lv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g 677 (1034)
T 3ixz_A 598 LVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVING 677 (1034)
T ss_pred EEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEec
Confidence 9999999999999999999999999999999999999999999999643210 112233
Q ss_pred ccccccCCCccHHHHhhcc--CeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhcc
Q 005879 544 QDKDESIAALPIDELIEKA--DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 620 (672)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~a 620 (672)
.... .+...++.+..... .+|+|++|+||.++++.+|+.|+.|+|+|||.||++||+.||+||||| ||++.+|++|
T Consensus 678 ~~l~-~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aA 756 (1034)
T 3ixz_A 678 MQLK-DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAA 756 (1034)
T ss_pred Hhhh-hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhc
Confidence 2222 23334455555544 389999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 005879 621 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGSL 666 (672)
Q Consensus 621 d~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 666 (672)
|+|+.++++++++.++++||++|+|+++++.|.+++|+..++..++
T Consensus 757 D~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~ 802 (1034)
T 3ixz_A 757 DMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLI 802 (1034)
T ss_pred CEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987655443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-107 Score=968.15 Aligned_cols=656 Identities=25% Similarity=0.400 Sum_probs=551.8
Q ss_pred HHHhhcc-cccccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHH
Q 005879 8 LEAVLKE-TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMA 84 (672)
Q Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (672)
+++++++ ..+||..+.+++++.|+++ .+|||++|+++|+++||+|+++.++ .++|..|+++|++|++++++++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls 116 (1028)
T 2zxe_A 37 LDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILC 116 (1028)
T ss_dssp CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHH
T ss_pred HHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3444444 4489999999999999998 6899999999999999999999875 67788999999999999999999998
Q ss_pred HHHhcC-----C-CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEE
Q 005879 85 IALANG-----G-GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDII 158 (672)
Q Consensus 85 ~~~~~~-----~-~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI 158 (672)
+++... . ....+|+++++++++++++.++++++++++++++++|+++.+++++|+|||++++|++++|+|||+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 117 FLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 876321 1 1112466777788888999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCC----------cceeceeeeeCceEEEEEEecccccchhhh
Q 005879 159 SIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAA 228 (672)
Q Consensus 159 ~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~ 228 (672)
.|++||+|||||+|++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 9999999999999999987799999999999999999876 499999999999999999999999999999
Q ss_pred hhhccc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHH
Q 005879 229 HLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307 (672)
Q Consensus 229 ~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~ 307 (672)
+++..+ .+++++++.++++..+++.+.++.+++.+++. .+.+.+|...+..++++++++|||+||++++++++.++.+
T Consensus 277 ~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 998876 67899999999998876654444333333332 2334567777888888999999999999999999999999
Q ss_pred HhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEe--cc-cC-----------CCh--HHHHHHHHHccc
Q 005879 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV--FT-KG-----------VDA--DTVVLMAAQASR 371 (672)
Q Consensus 308 l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~--~~-~~-----------~~~--~~~~~~~~~~~~ 371 (672)
|+++|++||+++++|+||++++||||||||||+|+|+|.++++.. +. .+ .++ +.++..++.++.
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999998865421 10 00 011 134445554431
Q ss_pred c---------------cccchHHHHHHhhcC----ChHHHhcccceEEEecCCCCCceEEEEEEeC---CCeEEEEEcCc
Q 005879 372 T---------------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRVSKGA 429 (672)
Q Consensus 372 ~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~~~~~~~~KGa 429 (672)
. ..++|.|.|++.+.. +....+..++.+..+||+|.+|||++++... ++++++++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 1 124788889987653 2233456788999999999999999998753 57889999999
Q ss_pred HHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCeEEEEEee
Q 005879 430 PEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQFMGLMP 488 (672)
Q Consensus 430 ~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~-----------~~~e~~l~~lG~i~ 488 (672)
||.|+++|+. +.+.++.+.+.+++|+++|+||+++||+.++..++ +..|.+++|+|+++
T Consensus 516 ~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~ 595 (1028)
T 2zxe_A 516 PERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595 (1028)
T ss_dssp HHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEE
T ss_pred cHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeec
Confidence 9999999963 23456778889999999999999999999865421 22368999999999
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------Ccccccccc
Q 005879 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLGQDK 546 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~~~~ 546 (672)
++||+||+++++|++|+++||+++|+|||+..+|.++|+++||..+... ..++.|.++
T Consensus 596 i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 596 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred cCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence 9999999999999999999999999999999999999999999743111 112333333
Q ss_pred cccCCCccHHHHhhccC--eecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc-cccHHHhhccCEE
Q 005879 547 DESIAALPIDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIV 623 (672)
Q Consensus 547 ~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg-~~~~~~k~~ad~v 623 (672)
+ .+...+++++..... +|+|++|+||..+|+.+|+.|+.|+|+|||.||+|||++||+||||| +|++.+|++||+|
T Consensus 676 ~-~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 676 K-DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp T-TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEE
T ss_pred h-hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEE
Confidence 2 133445666666665 99999999999999999999999999999999999999999999999 7999999999999
Q ss_pred EcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005879 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSGS 665 (672)
Q Consensus 624 ~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 665 (672)
+.+++++++.+++++||++|+|+++++.|++++|+..++.++
T Consensus 755 l~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~ 796 (1028)
T 2zxe_A 755 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 796 (1028)
T ss_dssp ETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998755443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-104 Score=942.91 Aligned_cols=648 Identities=29% Similarity=0.420 Sum_probs=541.6
Q ss_pred ccccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--
Q 005879 16 VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGG-- 91 (672)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 91 (672)
.+||..+.+++++.|+++ .+|||++|+++|+++||+|+++.++ +++|..|++||++|+++++++++++++++....
T Consensus 3 ~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~ 82 (995)
T 3ar4_A 3 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 82 (995)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred chhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 378999999999999998 6799999999999999999999865 567788999999999999999999999875432
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCe--EEEEeCCCCCCCcEEEEcCCCeecc
Q 005879 92 -GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGR--WNEQDASILVPGDIISIKLGDIIPA 168 (672)
Q Consensus 92 -~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~--~~~i~~~~L~~GDiI~l~~G~~iPa 168 (672)
++...|.+.+.++++++++..+++++|+++++++++|+++.+++++|+|||+ .++|++++|+|||+|.|++||+|||
T Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 83 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 1123677778888888899999999999999999999999999999999887 6999999999999999999999999
Q ss_pred cEEEEe--cCCeEEeccCcCCCCcccccCCC-------------CcceeceeeeeCceEEEEEEecccccchhhhhhhcc
Q 005879 169 DARLLE--GDPLKIDQSALTGESLPVTKGPG-------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDT 233 (672)
Q Consensus 169 D~~ll~--g~~l~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 233 (672)
||+|++ +..+.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|++.++++.
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 999965 44578999999999999999987 689999999999999999999999999999999987
Q ss_pred c-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c----cCcccc----chhhHHHHHHHhhcCCcchHHHHHHHHH
Q 005879 234 T-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYP-I----QDREYR----PGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (672)
Q Consensus 234 ~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~----~~~~~~~~~l~~~~P~~L~~~~~~~~~~ 303 (672)
+ .+++++++.+++++.++..++++.+++.+++.+. + .+.+|. ..+..++++++++|||+||++++++++.
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~ 322 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLAL 322 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 6 6789999999999888765554444443333221 1 111121 1244667888999999999999999999
Q ss_pred HHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEec--------------ccCCCh----------
Q 005879 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF--------------TKGVDA---------- 359 (672)
Q Consensus 304 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--------------~~~~~~---------- 359 (672)
+..+|+++|+++|+++++|+||++++||||||||||+|+|+|.++..... ....++
T Consensus 323 ~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 402 (995)
T 3ar4_A 323 GTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKP 402 (995)
T ss_dssp HHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEE
T ss_pred HHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccc
Confidence 99999999999999999999999999999999999999999988754210 000011
Q ss_pred ---------HHHHHHHHHcccc------------cccchHHHHHHhhcCCh-------H-------------HHhcccce
Q 005879 360 ---------DTVVLMAAQASRT------------ENQDAIDAAIVGMLADP-------K-------------EARAGIQE 398 (672)
Q Consensus 360 ---------~~~~~~~~~~~~~------------~~~~~~~~ai~~~~~~~-------~-------------~~~~~~~~ 398 (672)
..+..+++.++.. ..++|.+.|++.+.... . ..+..++.
T Consensus 403 ~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 482 (995)
T 3ar4_A 403 IRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKK 482 (995)
T ss_dssp CCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEE
T ss_pred ccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCce
Confidence 1122233333211 12579999887543210 0 12346788
Q ss_pred EEEecCCCCCceEEEEEEeCCC-----eEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHH--HHcCCeE
Q 005879 399 VHFLPFNPTDKRTALTYIDNAG-----KMHRVSKGAPEQILNLAHN----------KSDIERRVHAVIDKF--AERGLRS 461 (672)
Q Consensus 399 ~~~~~f~~~~~~~~v~~~~~~~-----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~r~ 461 (672)
++.+||+|++|||+++++.++| +..+++||+||.|+++|+. +.+.++.+.+.+++| +++|+||
T Consensus 483 ~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRv 562 (995)
T 3ar4_A 483 EFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRC 562 (995)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEE
T ss_pred EEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceE
Confidence 9999999999999999887666 6789999999999999964 234567788889999 9999999
Q ss_pred EEEEeeecCCCCC----------CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 005879 462 LAVAYQEVPEGRK----------DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (672)
Q Consensus 462 l~~a~~~l~~~~~----------~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi 531 (672)
+++|||+++..+. +..|.+++|+|+++++||+||+++++|+.|+++||+++|+|||+..+|.++|+++|+
T Consensus 563 La~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 563 LALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp EEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred EEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 9999998864321 223789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 532 GTNMY--PSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 532 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
..... ...++.|.+++ .+...++.+.+.+..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||+.||+||||
T Consensus 643 ~~~~~~i~~~~~~g~~~~-~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam 721 (995)
T 3ar4_A 643 FGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721 (995)
T ss_dssp SCTTCCCTTTEEEHHHHH-TSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred CCCCCcccceEEEchhhh-hCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence 75321 23455565544 3444566777788899999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 005879 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSG 664 (672)
Q Consensus 610 g~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~ 664 (672)
|+|++.++++||+++.+++++++.+++++||++|+||++++.|++++|+..++..
T Consensus 722 g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~ 776 (995)
T 3ar4_A 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCI 776 (995)
T ss_dssp TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998764433
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-86 Score=753.85 Aligned_cols=508 Identities=23% Similarity=0.366 Sum_probs=445.7
Q ss_pred Chhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE-CCeEEEEeCCCCCCCcEEEEcCCCeecccEEEE
Q 005879 96 DWQD-FVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLL 173 (672)
Q Consensus 96 ~~~~-~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll 173 (672)
.|++ ...++++++++.+++.+.++++.+++++|+++.|.+++++| ||++++|++++|+|||+|.|++||+|||||+|+
T Consensus 186 ~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl 265 (736)
T 3rfu_A 186 VYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ 265 (736)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEE
Confidence 4555 44667888999999999999999999999999999999888 999999999999999999999999999999999
Q ss_pred ecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHH
Q 005879 174 EGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCI 252 (672)
Q Consensus 174 ~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~ 252 (672)
+|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|++.++++++ .+++++++.+++++.+++
T Consensus 266 ~G~~-~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v 344 (736)
T 3rfu_A 266 EGRS-FVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFV 344 (736)
T ss_dssp SSCE-EEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHH
T ss_pred ECce-EeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHH
Confidence 9997 79999999999999999999999999999999999999999999999999999887 678899999999999887
Q ss_pred HHHHHHHHHHHHHHhhccC-ccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEE
Q 005879 253 CSIAVGMIVEIIVMYPIQD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331 (672)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~ 331 (672)
+++++++++.+++|+.+.. ..|..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|+||
T Consensus 345 ~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~ 424 (736)
T 3rfu_A 345 PAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLV 424 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEE
Confidence 7666665555555544433 247788999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceE
Q 005879 332 SDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRT 411 (672)
Q Consensus 332 ~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 411 (672)
||||||||+|+|++.++. ..+.+.++++.+++..+. .+.||++.|++.+... .++......+|++..++.
T Consensus 425 fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~-~s~hPla~Aiv~~a~~-----~~~~~~~~~~f~~~~g~g 494 (736)
T 3rfu_A 425 VDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEH-QSEHPLANAIVHAAKE-----KGLSLGSVEAFEAPTGKG 494 (736)
T ss_dssp ECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHH-SSCCHHHHHHHHHHHT-----TCCCCCCCSCCCCCTTTE
T ss_pred EeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhh-cCCChHHHHHHHHHHh-----cCCCccCcccccccCCce
Confidence 999999999999998865 235677777777766544 3457999999987532 122223345677766654
Q ss_pred EEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccC
Q 005879 412 ALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFD 491 (672)
Q Consensus 412 ~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d 491 (672)
... ..+|+. +.+|+++.+.+..... +.+.+..++++.+|+|++++|++. +++|+++++|
T Consensus 495 v~~--~~~g~~--~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~D 553 (736)
T 3rfu_A 495 VVG--QVDGHH--VAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVED 553 (736)
T ss_dssp EEE--CSSSSC--EEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEEC
T ss_pred EEE--EECCEE--EEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEeec
Confidence 322 224443 4569999887754332 245667789999999999999975 8999999999
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++|++++++|++|+++|++++|+|||+..++..+++++|++ .++++++|+
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P~ 603 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMPE 603 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCHH
Confidence 99999999999999999999999999999999999999996 379999999
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~ 651 (672)
+|..+++.++++|+.|+|+|||.||+|||+.||+|||||+|++.++++||+|+.+++++++.+++++||++++||++|+.
T Consensus 604 ~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~ 683 (736)
T 3rfu_A 604 DKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLF 683 (736)
T ss_dssp HHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHH
Q 005879 652 YAVSITIRIVVSGS 665 (672)
Q Consensus 652 ~~~~~n~~~~~~~~ 665 (672)
|++.+|+..+..++
T Consensus 684 ~a~~yN~~~iplAa 697 (736)
T 3rfu_A 684 FAFIYNVLGVPLAA 697 (736)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987765
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-85 Score=737.98 Aligned_cols=506 Identities=24% Similarity=0.373 Sum_probs=436.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
+|...+.++++++++.+++.+.++++.++++++++..|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456667777888888888888888888899999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005879 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|++.++++++ .+++++++.+++++.+++++
T Consensus 175 ~~-~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 ES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp CE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred cE-EEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 97 79999999999999999999999999999999999999999999999999999887 67899999999999988776
Q ss_pred HHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeec
Q 005879 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (672)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (672)
+++.+++.++.++...+.++..++..++++++++|||+|++++++++..+..+++++|++||+++++|+||++|++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence 66555555555444445567788899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEE
Q 005879 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT 414 (672)
Q Consensus 335 TGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~ 414 (672)
|||||+|+|++.++.. .+.+.++++.+++..+. .+.||++.|++.+.... +.......+|.....+. +.
T Consensus 334 TGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~-~s~hPla~Aiv~~a~~~-----g~~~~~~~~~~~~~g~g-~~ 402 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAER-RSEHPIAEAIVKKALEH-----GIELGEPEKVEVIAGEG-VV 402 (645)
T ss_dssp GGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTE-EE
T ss_pred cccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhh-cCCChhHHHHHHHHHhc-----CCCcCCccceEEecCCc-eE
Confidence 9999999999988542 24567777777766544 45679999998864321 11111011111111111 11
Q ss_pred EEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCC
Q 005879 415 YIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494 (672)
Q Consensus 415 ~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r 494 (672)
. ..+.+|+++.+.+... +.++.+.+..+++..+|+|+++++++. +++|+++++|++|
T Consensus 403 ~-------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 403 A-------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp E-------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred E-------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 0 2345799988766432 223556777889999999999999975 8999999999999
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH
Q 005879 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (672)
|+++++|++|+++|++++|+|||+..++..+++++|++ .++++++|++|.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHH
Confidence 99999999999999999999999999999999999995 379999999999
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~ 654 (672)
.+++.+++. +.|+|+|||.||+|||+.||+|||||+|++.++++||+++.+++++++.+++++||++++|+++|+.|++
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhc
Q 005879 655 SITIRIVVSGSLD 667 (672)
Q Consensus 655 ~~n~~~~~~~~~~ 667 (672)
++|+.++..++++
T Consensus 589 ~~N~~~i~la~~~ 601 (645)
T 3j08_A 589 IYNVILIPAAAGL 601 (645)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHh
Confidence 9999998877766
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-84 Score=745.09 Aligned_cols=507 Identities=24% Similarity=0.376 Sum_probs=436.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEec
Q 005879 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (672)
Q Consensus 96 ~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g 175 (672)
+|...+.++++++++.+++.+.+++++++++++++..|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34445667777788888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc-CCCChHHHHHHHHHHHHHHH
Q 005879 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (672)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (672)
++ .||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|+++|.+|.+|++.++++++ .+++++++.+++++.+++++
T Consensus 253 ~~-~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 ES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp CE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred Ce-EEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 97 79999999999999999999999999999999999999999999999999999887 67899999999999988776
Q ss_pred HHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEEeec
Q 005879 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (672)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (672)
+++++++.++.++...+.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|+|||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 66555554544444445567788999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEE
Q 005879 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT 414 (672)
Q Consensus 335 TGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~ 414 (672)
|||||+|+|++.++. . .+.+.++++.+++..+. .+.||++.|++.+.... +.......+|.....+ ++.
T Consensus 412 TGTLT~g~~~v~~~~--~--~~~~~~~~l~~aa~~e~-~s~hP~~~Ai~~~a~~~-----~~~~~~~~~~~~~~g~-g~~ 480 (723)
T 3j09_A 412 TGTLTKGKPEVTDLV--P--LNGDERELLRLAAIAER-RSEHPIAEAIVKKALEH-----GIELGEPEKVEVIAGE-GVV 480 (723)
T ss_dssp HHHTSCSCCEEEEEE--E--SSSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHT-----TCCCCSCCCCEEETTT-EEE
T ss_pred CCccccCceEEEEEE--e--CCCCHHHHHHHHHHHhc-cCCCchhHHHHHHHHhc-----CCCcCCccceEEecCC-ceE
Confidence 999999999998854 2 24567777777766544 45679999998864321 1111000111111111 111
Q ss_pred EEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCC
Q 005879 415 YIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494 (672)
Q Consensus 415 ~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r 494 (672)
...+.+|+++.+.+... +.++.+.+..++++.+|+|+++++++. +++|+++++|++|
T Consensus 481 -------~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 481 -------ADGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp -------ETTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred -------EEEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 02345799988766432 223567778889999999999999865 8999999999999
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHH
Q 005879 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (672)
Q Consensus 495 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (672)
|+++++|+.|+++|++++|+|||+..++..+++++|++ .++++++|++|.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHH
Confidence 99999999999999999999999999999999999995 379999999999
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005879 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (672)
Q Consensus 575 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~ 654 (672)
.+++.+++. +.|+|+|||.||+|||+.||+|||||+|++.++++||+++.+++++++.+++++||++++|+++|+.|++
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhcc
Q 005879 655 SITIRIVVSGSLDF 668 (672)
Q Consensus 655 ~~n~~~~~~~~~~~ 668 (672)
++|+.++..++++|
T Consensus 667 ~~n~~~i~~a~~~~ 680 (723)
T 3j09_A 667 IYNVILIPAAAGLL 680 (723)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999988777663
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-34 Score=293.40 Aligned_cols=258 Identities=21% Similarity=0.334 Sum_probs=198.7
Q ss_pred HHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHH
Q 005879 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIV 383 (672)
Q Consensus 304 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ 383 (672)
++.+++++|+++|+++++|.|+++++||||||||||+|++.+..+. +.++++.+++..+. .+.||++.++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~-~s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEA-LSSHPIAKAIV 75 (263)
Confidence 5688999999999999999999999999999999999999997642 33445555555443 45579999988
Q ss_pred hhcCChHHHhcccceEEEecCCCCCceEEEEEEe-CCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEE
Q 005879 384 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYID-NAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSL 462 (672)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~-~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l 462 (672)
.++.... +.....-.|.. ..+.-+.. -++. .+.-|+++ +|.+ +
T Consensus 76 ~~~~~~g-----~~~~~~~~~~~---~~G~g~~~~~~~~--~~~~G~~~-------------------------~~~~-~ 119 (263)
T 2yj3_A 76 KYAKEQG-----VKILEVKDFKE---ISGIGVRGKISDK--IIEVKKAE-------------------------NNND-I 119 (263)
Confidence 7643211 10000000000 00000000 0000 00011111 2344 5
Q ss_pred EEEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc
Q 005879 463 AVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542 (672)
Q Consensus 463 ~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~ 542 (672)
.++++. .+.|.+.+.|+++|++.++|+.|++.|++++|+||++...+..+++.+|+.
T Consensus 120 ~~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------- 176 (263)
T 2yj3_A 120 AVYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ---------- 176 (263)
Confidence 555554 789999999999999999999999999999999999999999999999985
Q ss_pred cccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCE
Q 005879 543 GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622 (672)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~ 622 (672)
.+|..+.|+.|..+++.++..++.|+|||||.||++|++.||+|+++|++++.+++.||+
T Consensus 177 --------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~ 236 (263)
T 2yj3_A 177 --------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADI 236 (263)
Confidence 246677799999999999999999999999999999999999999999988999999999
Q ss_pred EEcCCChhHHHHHHHHHHHHHHHHHHH
Q 005879 623 VLTEPGLSVIISAVLTSRAIFQRMKNY 649 (672)
Q Consensus 623 v~~~~~~~~i~~~i~~gr~~~~~i~~~ 649 (672)
++.++++..+..+++.+|+++++|++|
T Consensus 237 v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 237 ILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=255.31 Aligned_cols=279 Identities=28% Similarity=0.429 Sum_probs=207.1
Q ss_pred HHHHHhhCCCcccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHH
Q 005879 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIV 383 (672)
Q Consensus 304 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ 383 (672)
++++++++|+++|+++++|+++++++||||||||||.+.+.+.++. ... + +.++++.+++..+. .+.||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~--~~~-~-~~~~~l~~~~~~e~-~s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV--PLN-G-DERELLRLAAIAER-RSEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEE--ESS-S-CHHHHHHHHHHHTT-TCCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEE--eCC-C-CHHHHHHHHHHHhh-cCCCHHHHHHH
Confidence 5688999999999999999999999999999999999999887643 222 3 67777777766644 45679999988
Q ss_pred hhcCChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005879 384 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLA 463 (672)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 463 (672)
.++..........+.+..++ .. ++. . ..+.+|+++.+.+.... .++.+....+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----G~-~~~--~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIA-----GE-GVV--A-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEET-----TT-EEE--E-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeec-----CC-CeE--E-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 76421110000001111110 00 000 0 12345776655432211 112345566778889999999
Q ss_pred EEeeecCCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccc
Q 005879 464 VAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 543 (672)
Q Consensus 464 ~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 543 (672)
+++.. .+.+.+...++++|++.++|+.|+++|+++.++||++...+..+.+.+|+..
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------- 204 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------- 204 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----------
Confidence 99876 8999999999999999999999999999999999999999999999999852
Q ss_pred ccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEE
Q 005879 544 QDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (672)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v 623 (672)
.|....|..|...++.++.. +.++||||+.||++|++.||++++++++.+..+..||++
T Consensus 205 --------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 205 --------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp --------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred --------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 35666788999999999988 899999999999999999999999998777778889999
Q ss_pred EcCCChhHHHHHHHHHHHHHHHHH
Q 005879 624 LTEPGLSVIISAVLTSRAIFQRMK 647 (672)
Q Consensus 624 ~~~~~~~~i~~~i~~gr~~~~~i~ 647 (672)
+.++++..+..+++.+|+++++|+
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 988899999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-29 Score=215.11 Aligned_cols=110 Identities=28% Similarity=0.492 Sum_probs=104.7
Q ss_pred HHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcccccCCCCcceec
Q 005879 124 AAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSG 203 (672)
Q Consensus 124 ~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aG 203 (672)
++++|+++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCCEEEeC
Confidence 456778888999999999999999999999999999999999999999999995 8999999999999999999999999
Q ss_pred eeeeeCceEEEEEEecccccchhhhhhhccc
Q 005879 204 STCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234 (672)
Q Consensus 204 t~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 234 (672)
|.+.+|.+.++|+++|.+|.+|+|.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=214.83 Aligned_cols=116 Identities=28% Similarity=0.478 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHhcCCceEEEECCe------EEEEeCCCCCCCcEEEEcCCCeecccEEEEecCCeEEeccCcCCCCcc
Q 005879 118 ENNAGNAAAALMARLAPKGKVLRDGR------WNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLP 191 (672)
Q Consensus 118 ~~~~~~~~~~l~~~~~~~~~V~r~g~------~~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~p 191 (672)
++++.+++++|+++.|.+++|+|+|+ ++.|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 45677788999999999999999764 7899999999999999999999999999999998 7999999999999
Q ss_pred cccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhccc
Q 005879 192 VTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234 (672)
Q Consensus 192 v~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 234 (672)
+.|.+|+.+|+||.+.+|.+.++|+++|.+|.+|+|.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999988754
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-27 Score=240.11 Aligned_cols=276 Identities=28% Similarity=0.402 Sum_probs=199.5
Q ss_pred ccchhhhhhhcCccEEEeeccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhc
Q 005879 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA 394 (672)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 394 (672)
+|+++++|.+++++.||||++||||.|++.+..+. ... + +.+.++.+++..... +.+++..++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~--~~~-~-~~~~~~~~~~~~~~~-s~~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIV--GFN-H-SEDELLQIAASLEAR-SEHPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEE--ESS-S-CHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEE--ecC-C-CHHHHHHHHHHhhcc-CCCHHHHHHHHHHHhcCCCCC
Confidence 58899999999999999999999999999998744 333 2 667777666655433 345677776655321110001
Q ss_pred ccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC
Q 005879 395 GIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK 474 (672)
Q Consensus 395 ~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~ 474 (672)
....+..++- .. .... .++..+ ..|+++.+........ .....+...+.+.+.+++..
T Consensus 76 ~~~~~~~~~g---~~---~~~~-~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPG---KG---VEGI-VNGRRY--MVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETT---TE---EEEE-ETTEEE--EEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCC---CE---EEEE-ECCEEE--EEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 1112222211 11 1111 123333 3477777665443221 23456677889998888865
Q ss_pred CCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCcc
Q 005879 475 DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALP 554 (672)
Q Consensus 475 ~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 554 (672)
.++|.+.+.++++|++.++++.|++.|+++.++||++...+..+.+.+|+..
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------- 185 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------- 185 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh---------------------
Confidence 8999999999999999999999999999999999999999999999999852
Q ss_pred HHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHH
Q 005879 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
.|..+.|.+|...++.+.+.. .++||||+.||++|++.||+|++||++++..++.||+++..++++++.+
T Consensus 186 ---------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 186 ---------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp ---------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred ---------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 477778999999999998876 5799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 005879 635 AVLTSRAIFQRMKNYTIYAVS 655 (672)
Q Consensus 635 ~i~~gr~~~~~i~~~i~~~~~ 655 (672)
+++.+|++++++++|+.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999874
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-21 Score=201.77 Aligned_cols=144 Identities=12% Similarity=0.013 Sum_probs=113.3
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHH--hhccCeecc
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL--IEKADGFAG 567 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~ 567 (672)
.+++||+++++++.|+++|++++|+||+...++.++++++|+..+.. .+...... .+...+... ....+.+++
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l~--~~~~~~~~~~~~~~i~~~~k 213 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMD--FDENGVLKGFKGELIHVFNK 213 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECEE--ECTTSBEEEECSSCCCTTCH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeEE--EcccceeEeccccccchhhc
Confidence 47899999999999999999999999999999999999999864321 01110000 000000000 011245778
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHH---hhCCeeEEcc-------cccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL---KKADIGIAVA-------DATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al---~~A~vgIamg-------~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
..|.+|...+..++..++.|+|+|||.||+||+ +.||+||||| ++.+.+++++|+|++++++..++.+|.
T Consensus 214 ~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 214 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred ccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 889999999999999999999999999999995 4999999999 788999999999999999999998875
Q ss_pred H
Q 005879 638 T 638 (672)
Q Consensus 638 ~ 638 (672)
.
T Consensus 294 ~ 294 (297)
T 4fe3_A 294 Q 294 (297)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=156.89 Aligned_cols=138 Identities=22% Similarity=0.363 Sum_probs=114.7
Q ss_pred cCCChHHHHHHHHHcc--cccccchHHHHHHhhcCCh--HHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcH
Q 005879 355 KGVDADTVVLMAAQAS--RTENQDAIDAAIVGMLADP--KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAP 430 (672)
Q Consensus 355 ~~~~~~~~~~~~~~~~--~~~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~ 430 (672)
.+.+.+.++.+++.++ .....||+|.|++.+.... ...+..++.+..+||+|.+|||++++...+|+.++++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 4667788888888877 4456789999999886532 22356789999999999999999999877788899999999
Q ss_pred HHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC---CCCCCCCeEEEEEeeccCC
Q 005879 431 EQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR---KDSPGGPWQFMGLMPLFDP 492 (672)
Q Consensus 431 e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~---~~~~e~~l~~lG~i~~~d~ 492 (672)
|.|+++|+. +.+.++.+.+.++.|+++|+|||++|||.++..+ ....|.+|+|+|+++|-|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999974 3456788999999999999999999999987653 2346899999999999875
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-14 Score=139.22 Aligned_cols=127 Identities=21% Similarity=0.337 Sum_probs=103.6
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHH
Q 005879 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (672)
+|+.|+++|+++.++||++...+..+++.+|+.. +|... ..|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 8999999999999999999999999999999852 12221 345444444
Q ss_pred ----HhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCCh----hHHHHHHHHHHHHHHHHHHHHH
Q 005879 580 ----LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL----SVIISAVLTSRAIFQRMKNYTI 651 (672)
Q Consensus 580 ----l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~----~~i~~~i~~gr~~~~~i~~~i~ 651 (672)
++...+.++|+||+.||++|++.||++++++++.+.+++.||+++.+++. ..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 44446789999999999999999999999999999999999999988754 4566778889999999999999
Q ss_pred HHHHHhH
Q 005879 652 YAVSITI 658 (672)
Q Consensus 652 ~~~~~n~ 658 (672)
|++.+|-
T Consensus 182 ~~~~~~~ 188 (189)
T 3mn1_A 182 EGHHHHH 188 (189)
T ss_dssp TTC----
T ss_pred ccccccC
Confidence 9988874
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3e-13 Score=128.19 Aligned_cols=132 Identities=20% Similarity=0.218 Sum_probs=106.0
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
.+++.++|+.|+++|++++++||++...+..+.+.+|+... |... ..|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------------------------------~~~~--k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------------------------------FLGK--LEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------------------------------EESC--SCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecCC--CCc
Confidence 45678999999999999999999999999999999998521 1111 234
Q ss_pred HHH----HHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH-HHH---HHHHHHHHH
Q 005879 574 YEI----VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAV---LTSRAIFQR 645 (672)
Q Consensus 574 ~~i----v~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~-~~i---~~gr~~~~~ 645 (672)
... ++.+....+.++|+||+.||++|++.||++++|+++.+.+++.||+++.+++..++. +++ ...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 443 344444457899999999999999999999999999999999999999998888877 433 446667889
Q ss_pred HHHHHHHHHHHh
Q 005879 646 MKNYTIYAVSIT 657 (672)
Q Consensus 646 i~~~i~~~~~~n 657 (672)
++.++.|..+.+
T Consensus 165 ~~~~~~~~~~~~ 176 (180)
T 1k1e_A 165 FDTAQGFLKSVK 176 (180)
T ss_dssp HHCHHHHHHHGG
T ss_pred hhhccchhhhhc
Confidence 998888887654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-13 Score=134.03 Aligned_cols=149 Identities=19% Similarity=0.103 Sum_probs=105.7
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--Cc-cc--ccccc-cc-cC------------
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SS-AL--LGQDK-DE-SI------------ 550 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~--~~-~~--~~~~~-~~-~~------------ 550 (672)
...+.+++.++|++|+++|++++++|||+...+..+++.+|+..+.+. .. +. .+... .. .+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999998642110 00 11 11111 00 00
Q ss_pred -----------------------CCccHHHHhhc--cC-----eecccCh--hhHHHHHHHHhhC----CCEEEEECCCc
Q 005879 551 -----------------------AALPIDELIEK--AD-----GFAGVFP--EHKYEIVKRLQAR----KHICGMTGDGV 594 (672)
Q Consensus 551 -----------------------~~~~~~~~~~~--~~-----v~~~~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ 594 (672)
......++.+. .. .+..+.| .+|...++.+.+. .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 00001111110 00 1122334 5788877776543 35799999999
Q ss_pred cCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 595 ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
||.+|++.|++|++|+|+.+.+++.||+++.+++.+++.++++.
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999998863
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-13 Score=144.49 Aligned_cols=151 Identities=16% Similarity=0.150 Sum_probs=114.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-----CcccccccccccCCCccHHHHhhccCeec
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----SSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
++.|++.+.++.|+++|+++.++||+....+..+.+.+|+...... ...+.|.... .....
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~--------------~~~~~ 243 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLG--------------EVVSA 243 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEES--------------CCCCH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecc--------------cccCh
Confidence 6889999999999999999999999999999999999998531100 0000110000 01123
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHH
Q 005879 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i 646 (672)
+..|+-...+++.++...+.++|+|||.||++|++.||+|++| ++.+.+++.||+++..++++++..+++......+++
T Consensus 244 kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 244 QTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 3345556677777777778899999999999999999999999 899999999999999999999999999988888899
Q ss_pred HHHHHHHHHHh
Q 005879 647 KNYTIYAVSIT 657 (672)
Q Consensus 647 ~~~i~~~~~~n 657 (672)
+.|+.|++.+|
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 99999998877
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2.5e-12 Score=130.77 Aligned_cols=67 Identities=22% Similarity=0.281 Sum_probs=58.4
Q ss_pred hHHHHHHHH----hhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRL----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l----~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+ ....+.|++|||+.||++|++.||+||||||+.+.+|++||+|+.+++.+||+++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 565555444 4445679999999999999999999999999999999999999999999999999874
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=1e-12 Score=122.44 Aligned_cols=137 Identities=19% Similarity=0.169 Sum_probs=97.9
Q ss_pred HcCCeEEEEEeeec-CCCCCCCCCCCeEEEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH--HhCCC
Q 005879 456 ERGLRSLAVAYQEV-PEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR--RLGMG 532 (672)
Q Consensus 456 ~~G~r~l~~a~~~l-~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~--~~gi~ 532 (672)
.++.+.+++-.... ..... ....+-..++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 6 ~~~ikliv~D~DGtL~d~~~-~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~ 76 (168)
T 3ewi_A 6 LKEIKLLVCNIDGCLTNGHI-YVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK 76 (168)
T ss_dssp -CCCCEEEEECCCCCSCSCC-BCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC
T ss_pred HhcCcEEEEeCccceECCcE-EEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE
Confidence 34567776665442 22211 11111246666777776 3899999999999999999 66777888 55552
Q ss_pred CCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 533 TNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
. |. .+.+|...++.+.+ ..+.++|+||+.||++|++.|+++++
T Consensus 77 -~------------------------------~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a 123 (168)
T 3ewi_A 77 -T------------------------------EV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV 123 (168)
T ss_dssp -E------------------------------EC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE
T ss_pred -E------------------------------EE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE
Confidence 0 11 12346555554433 35689999999999999999999999
Q ss_pred cccccHHHhhccCEEEcCCChhHHHH
Q 005879 609 VADATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 609 mg~~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
|+|+.+.+++.||+|+.+++.++++.
T Consensus 124 ~~na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 124 PADACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp CTTCCHHHHTTCSEECSSCTTTTHHH
T ss_pred eCChhHHHHHhCCEEeCCCCCccHHH
Confidence 99999999999999999998888543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.7e-12 Score=124.30 Aligned_cols=107 Identities=21% Similarity=0.347 Sum_probs=87.0
Q ss_pred HHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh--hhHHH
Q 005879 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP--EHKYE 575 (672)
Q Consensus 498 ~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~ 575 (672)
..+|+.|+++|+++.++||++...+..+++.+|+.. +|....| .--..
T Consensus 58 ~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~k~k~~~~~~ 107 (195)
T 3n07_A 58 GYGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQDDKVQAYYD 107 (195)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSCSSHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCCCCcHHHHHH
Confidence 346999999999999999999999999999999852 1222222 11234
Q ss_pred HHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHH
Q 005879 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 576 iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
+++.++...+.++++||+.||++|++.||++++|+|+.+.+++.||+++.+++.++++.
T Consensus 108 ~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~ 166 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVR 166 (195)
T ss_dssp HHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHH
T ss_pred HHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHH
Confidence 44555555678999999999999999999999999999999999999999888777543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-12 Score=123.51 Aligned_cols=124 Identities=17% Similarity=0.194 Sum_probs=102.5
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeec--ccChhhHHHHH
Q 005879 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA--GVFPEHKYEIV 577 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~p~~K~~iv 577 (672)
+|+.|+++|+++.++||++...+..+++.+|+.. +|. ...|+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 5999999999999999999999999999999863 122 22455566777
Q ss_pred HHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH----HHHHHHHHHHHHHHHHHHHH
Q 005879 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII----SAVLTSRAIFQRMKNYTIYA 653 (672)
Q Consensus 578 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~----~~i~~gr~~~~~i~~~i~~~ 653 (672)
+.++...+.++|+||+.||++|++.||++++|+++.+.+++.||+++.+++.++++ +.+...|..+.++.+++.++
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 77777778899999999999999999999999999999999999999998866644 45556777777777766543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.32 E-value=4e-12 Score=129.78 Aligned_cols=68 Identities=21% Similarity=0.199 Sum_probs=58.3
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC--EEEcCCChhHHHHHHHH
Q 005879 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 571 ~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad--~v~~~~~~~~i~~~i~~ 638 (672)
..|...++.+.+ ..+.+++|||+.||.+|++.|++|||||||.+.+|++|| .++.+++.+||+++|+.
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~ 281 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRK 281 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHH
Confidence 347666666543 346799999999999999999999999999999999998 47889999999999874
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=5.2e-12 Score=129.10 Aligned_cols=68 Identities=15% Similarity=0.132 Sum_probs=59.1
Q ss_pred hhHHHHHHHHh----hCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 571 EHKYEIVKRLQ----ARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 571 ~~K~~iv~~l~----~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
..|...++.+. ...+.|++|||+.||++|++.||+|+||||+.+.+|+.||+|+.+++.+||.++|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 34666555554 345679999999999999999999999999999999999999999999999999974
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-12 Score=131.94 Aligned_cols=67 Identities=22% Similarity=0.236 Sum_probs=47.1
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.+++|||+.||++|++.||+|||||||.+.+|++||+|+.+++.+||+++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC-
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHH
Confidence 36666555443 34679999999999999999999999999999999999999999999999998853
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-12 Score=133.38 Aligned_cols=67 Identities=21% Similarity=0.195 Sum_probs=58.9
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.|++|||+.||.+|++.|++|||||||.+.+|+.||+|+.+++.+||.++|+.
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 47666665543 34679999999999999999999999999999999999999999999999999863
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=124.00 Aligned_cols=67 Identities=24% Similarity=0.258 Sum_probs=57.7
Q ss_pred hHHHHHHH----HhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKR----LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~----l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++. ++...+.++++||+.||++|++.||+||||||+.+.+|+.||+|+.+++.+|+.++|+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 35444444 44455679999999999999999999999999999999999999999999999999874
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-11 Score=120.16 Aligned_cols=105 Identities=22% Similarity=0.302 Sum_probs=86.2
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHHH
Q 005879 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (672)
+|+.|+++|+++.++||++...+..+++.+|+.. +|... ..|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 8999999999999999999999999999999852 22222 345444444
Q ss_pred ----HhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH-HHHHH
Q 005879 580 ----LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 636 (672)
Q Consensus 580 ----l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~-i~~~i 636 (672)
++...+.++|+||+.||++|++.||++++|+++.+.+++.||+++.+++..+ +.+++
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~ 193 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVC 193 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHH
Confidence 4444678999999999999999999999999999999999999999887666 44443
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=7.3e-12 Score=126.45 Aligned_cols=67 Identities=28% Similarity=0.328 Sum_probs=58.6
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.++++||+.||.+|++.||+||||||+++.+|++||+|+.+++.+||.++|+.
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 46555555443 45679999999999999999999999999999999999999999999999999874
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-11 Score=114.59 Aligned_cols=105 Identities=24% Similarity=0.303 Sum_probs=86.7
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHHHHH-
Q 005879 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK- 578 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~- 578 (672)
+|+.|+++|+++.++||++...+..+++.+|+. . +... ..|...++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------~------------------------~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------V------------------------LHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------E------------------------EESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------e------------------------EeCC--CChHHHHHH
Confidence 899999999999999999999999999999984 1 1111 33444444
Q ss_pred ---HHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 579 ---RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 579 ---~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.++...+.++++||+.||++|++.||++++|+++.+.+++.||+++.+++.+++...+.
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 44434577999999999999999999999999999999999999999988777666543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=4.9e-12 Score=128.01 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=58.7
Q ss_pred hHHHHH----HHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIV----KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv----~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...+ +.++...+.+++|||+.||++|++.||+||||||+++.+|+.||+|+.+++.+||.++|++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 465444 4444456789999999999999999999999999999999999999999999999999874
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=6.4e-11 Score=110.04 Aligned_cols=108 Identities=28% Similarity=0.283 Sum_probs=88.9
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC--hhhHHHHH
Q 005879 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF--PEHKYEIV 577 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~iv 577 (672)
+++.|+++|+++.++||++...+..+.+.+|+... +.... |+--..+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~kpk~~~~~~~~ 88 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGVVDKLSAAEELC 88 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSCSCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------ecccCChHHHHHHHH
Confidence 89999999999999999999999999999998531 22222 23334555
Q ss_pred HHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH-HHHHHH
Q 005879 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAVL 637 (672)
Q Consensus 578 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~-i~~~i~ 637 (672)
+.++...+.++|+||+.||++|++.||++++++++.+.+++.||+++.+++..+ +.++++
T Consensus 89 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 89 NELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 666555678999999999999999999999999999999999999999988777 655554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.16 E-value=7.8e-11 Score=116.17 Aligned_cols=148 Identities=19% Similarity=0.205 Sum_probs=101.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-Cc--ccc-cccc-c---------------c--
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SS--ALL-GQDK-D---------------E-- 548 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~--~~~-~~~~-~---------------~-- 548 (672)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+.+. .. +.. +... . .
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34778999999999999999999999999999999999998542110 00 000 0000 0 0
Q ss_pred --cC------------------CCccHHHHhhcc----Cee-----cccCh--hhHHHHHHHHhh----CCCEEEEECCC
Q 005879 549 --SI------------------AALPIDELIEKA----DGF-----AGVFP--EHKYEIVKRLQA----RKHICGMTGDG 593 (672)
Q Consensus 549 --~~------------------~~~~~~~~~~~~----~v~-----~~~~p--~~K~~iv~~l~~----~~~~v~~iGDg 593 (672)
.. .......+.+.. .+. ....| ..|...++.+.+ ..+.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 00 001111122111 111 12222 356666655543 34679999999
Q ss_pred ccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 594 ~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.||.+|++.||++++|+|+.+..++.||+++.+++.+|+.++++.
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 999999999999999999999999999999999999999998864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.3e-11 Score=125.34 Aligned_cols=68 Identities=24% Similarity=0.206 Sum_probs=59.7
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 571 ~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
..|...++.+.+ ..+.+++|||+.||++|++.|++||||||+.+.+|++||+|+.+++.+||.++|+.
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 457766665543 34679999999999999999999999999999999999999999999999999873
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-10 Score=113.77 Aligned_cols=67 Identities=22% Similarity=0.219 Sum_probs=58.4
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.++++||+.||.+|++.|++|+||+|+.+.+++.||+++.+++.+|+.++|+.
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 57666666543 34579999999999999999999999999999999999999999999999998863
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.05 E-value=4.1e-10 Score=115.64 Aligned_cols=67 Identities=27% Similarity=0.293 Sum_probs=58.5
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEc-CCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT-EPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~-~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.++++||+.||.+|++.|++|+||+|+.+.+++.||+++. +++.+||.++|+.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 57776666543 2457999999999999999999999999999999999999999 9999999998874
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-10 Score=109.97 Aligned_cols=132 Identities=19% Similarity=0.201 Sum_probs=95.0
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccccc--ccccCCCccHHHHhhccCeecc-
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD--KDESIAALPIDELIEKADGFAG- 567 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~- 567 (672)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+...+ ... .+...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~~--------------~~~~~~ 137 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS--NTLIVENDALNG--------------LVTGHM 137 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEE--------------EEEESC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc--ceeEEeCCEEEe--------------eeccCC
Confidence 3578999999999999999999999999999999999999853110 0000000 000 00000
Q ss_pred cChhhHH----HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005879 568 VFPEHKY----EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 568 ~~p~~K~----~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
..+..|. .+.+.++...+.++++||+.||++|++.||++++| ++.+..++.||+++.++++.++..++++-
T Consensus 138 ~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp CSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 0123343 44445555567899999999999999999999999 88899999999999999999998877754
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.3e-10 Score=105.44 Aligned_cols=108 Identities=23% Similarity=0.288 Sum_probs=86.2
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC--hhhHHHHH
Q 005879 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF--PEHKYEIV 577 (672)
Q Consensus 500 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~iv 577 (672)
+|+.|+++|+++.++||++...+..+.+.+|+... |.... |+--..+.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------------------------------~~~~kpk~~~~~~~~ 110 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------------------------------YQGQSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------------------------------ECSCSCSHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------------------------------ecCCCCCHHHHHHHH
Confidence 89999999999999999999999999999998521 11111 22223344
Q ss_pred HHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH-HHHH
Q 005879 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAVL 637 (672)
Q Consensus 578 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~-~~i~ 637 (672)
+.+....+.++|+||+.||++|++.||++++++++.+.+++.||+++.+++..+++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 44444456799999999999999999999999988888888999999988777777 6654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.01 E-value=9.6e-10 Score=101.77 Aligned_cols=116 Identities=18% Similarity=0.167 Sum_probs=92.6
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhH
Q 005879 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (672)
Q Consensus 494 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (672)
.+++.++|+.|+++|+++.++||++...+..+.+.+|+... +. .....|+--
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------~~----------------------~~kp~~~~~ 89 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------YT----------------------GSYKKLEIY 89 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------EE----------------------CC--CHHHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------cc----------------------CCCCCHHHH
Confidence 46789999999999999999999999999999999998521 00 011223333
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHH-HHHH
Q 005879 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAVL 637 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~-~~i~ 637 (672)
..+++.++...+.++++||+.||++|.+.||++++++++.+..++.||+++.+.+.+++. ++++
T Consensus 90 ~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 90 EKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 455666665667899999999999999999999999988888899999999998888877 4443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-10 Score=119.93 Aligned_cols=152 Identities=13% Similarity=0.142 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccc--------------cccCCC---cc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDK--------------DESIAA---LP 554 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--------------~~~~~~---~~ 554 (672)
++++++.++++.|++ |+.+.++||+....+....+.+++..... ......... +..+.. ..
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH-GTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE-EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc-ccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 457899999999999 99999999998666666777777632110 000000000 000000 00
Q ss_pred HHHHhhc----c--Ceec----ccChhhHHHHHHHHhhCC--CEEEEECCCccCHHHHhhC----CeeEEcccccHHHhh
Q 005879 555 IDELIEK----A--DGFA----GVFPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARS 618 (672)
Q Consensus 555 ~~~~~~~----~--~v~~----~~~p~~K~~iv~~l~~~~--~~v~~iGDg~ND~~al~~A----~vgIamg~~~~~~k~ 618 (672)
+ +.+.. . ..+. -..+.+|...++.+.... +.|+++|||.||++|++.| |+|||| |+.+.+|+
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 0 00000 0 0111 112567888888665432 3499999999999999999 999999 99999999
Q ss_pred ccCEEEcCCChhHHHHHHH----HHHHHHHHHHH
Q 005879 619 ASDIVLTEPGLSVIISAVL----TSRAIFQRMKN 648 (672)
Q Consensus 619 ~ad~v~~~~~~~~i~~~i~----~gr~~~~~i~~ 648 (672)
.||+|+.+++.+++.++|+ .||..+ ++.+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 9999999999999887764 466666 4444
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.9e-10 Score=120.62 Aligned_cols=136 Identities=21% Similarity=0.221 Sum_probs=104.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-----CcccccccccccCCCccHHHHhhccCeec
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----SSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+...... ...++|.... .
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~------------------~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVG------------------P 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECS------------------S
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEcc------------------C
Confidence 6789999999999999999999999999999999999998531100 0111111000 0
Q ss_pred ccChhhHHHHHH----HHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHH
Q 005879 567 GVFPEHKYEIVK----RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (672)
Q Consensus 567 ~~~p~~K~~iv~----~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~ 642 (672)
-..+..|..+++ .++...+.++|+||+.||++|++.||+|+++ ++.+.+++.||+++..++++++..++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 011344544444 4444456799999999999999999999999 78899999999999999999999999988877
Q ss_pred HHHH
Q 005879 643 FQRM 646 (672)
Q Consensus 643 ~~~i 646 (672)
++..
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=4.9e-10 Score=107.90 Aligned_cols=127 Identities=23% Similarity=0.287 Sum_probs=88.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccc-cccccCCCccHHHHhhccCeecc-cC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ-DKDESIAALPIDELIEKADGFAG-VF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~-~~ 569 (672)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+.... ........ .... .+... ..
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------------~~~~~~~~ 140 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF-ANRLIVKDGKLTG--------------DVEGEVLK 140 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-EEEEEEETTEEEE--------------EEECSSCS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEE-EeeeEEECCEEcC--------------CcccCccC
Confidence 46689999999999999999999999988888888888874210 00000000 0000 00000 12
Q ss_pred hhhHHHHHHH----HhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHH
Q 005879 570 PEHKYEIVKR----LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 570 p~~K~~iv~~----l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
+..|...+.. +....+.++++||+.||++|++.||++++|+ +.+..+..||+++.+++++.+..
T Consensus 141 ~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 141 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp TTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 3456444443 3334567999999999999999999999998 67778889999998877877654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.96 E-value=5.8e-10 Score=112.73 Aligned_cols=67 Identities=21% Similarity=0.239 Sum_probs=58.2
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.++++||+.||.+|++.|++|++|+|+.+.+++.||+++.+++.+|+.++|+.
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 57666655543 34679999999999999999999999999999999999999999999999998873
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=109.82 Aligned_cols=61 Identities=20% Similarity=0.114 Sum_probs=30.4
Q ss_pred HHHh-hCCCE--EEEECCCccCHHHHhhCCeeEEccccc---HHHhhc--cC-EEEcCCChhHHHHHHHH
Q 005879 578 KRLQ-ARKHI--CGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 578 ~~l~-~~~~~--v~~iGDg~ND~~al~~A~vgIamg~~~---~~~k~~--ad-~v~~~~~~~~i~~~i~~ 638 (672)
+.++ ...+. ++++||+.||.+|++.|++||||+|+. +.+++. || +++.+++.+|++++|+.
T Consensus 199 ~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~ 268 (275)
T 1xvi_A 199 ATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDH 268 (275)
T ss_dssp HHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC-------------------------------
T ss_pred HHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHHH
Confidence 3344 34456 999999999999999999999999987 566653 79 89999999999998863
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.7e-09 Score=109.02 Aligned_cols=66 Identities=24% Similarity=0.254 Sum_probs=57.6
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.|...++.+.+ ..+.++++||+.||.+|++.||+|++|+|+.+.+++.||+++.+++.+|+.++|+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 57666665543 3467999999999999999999999999999999999999999999999999886
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=108.60 Aligned_cols=62 Identities=13% Similarity=0.286 Sum_probs=55.4
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhC--CeeEEcccccHHHhhccCEEEcC-CChhHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARSASDIVLTE-PGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A--~vgIamg~~~~~~k~~ad~v~~~-~~~~~i~~~i~~ 638 (672)
+|...++.+.+.-. |+++||+.||.+||+.| ++||||||+ ++.||+++.+ ++.++|.++|+.
T Consensus 160 ~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 160 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 68999988887644 99999999999999999 999999998 6789999988 889999998874
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.90 E-value=6.2e-10 Score=106.29 Aligned_cols=119 Identities=21% Similarity=0.256 Sum_probs=88.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+..+ +.+|+... ............ -....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGKFQ-----------------GIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTEEE-----------------EEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCceE-----------------CCcCCcc
Confidence 6889999999999999999999999988777777 77776321 000000000000 0234567
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.|...++.+ ..+.++++||+.||++|++.||++++|+++.+ .||+++. +++.+.+.++
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 799998888 56789999999999999999999999998776 8999985 4666766664
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.6e-09 Score=108.67 Aligned_cols=65 Identities=25% Similarity=0.307 Sum_probs=55.9
Q ss_pred hhHHHHHHHHhhC----C--CEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 571 EHKYEIVKRLQAR----K--HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 571 ~~K~~iv~~l~~~----~--~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
..|...++.+.+. . +.++++||+.||.+|++.|++|+||+|+.+ + .+++++.+++.+|+.++++.
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 4677777776554 3 779999999999999999999999999988 5 78899999999999998864
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.3e-09 Score=112.41 Aligned_cols=131 Identities=16% Similarity=0.160 Sum_probs=94.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeec-ccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA-GVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~p 570 (672)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+...........+...... +.. -..+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~--------------i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDN--------------ITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEE--------------ECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeee--------------EecccCCC
Confidence 4789999999999999999999999999999999999998532110000000000000 000 0112
Q ss_pred hhHH----HHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 571 EHKY----EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~----~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
..|. .+++.++...+.++|+||+.||++|++.||+|+++ ++.+..++.||.++..+++.++..+++
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 3343 44445555567899999999999999999999999 678888999999999889998877654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.4e-09 Score=102.97 Aligned_cols=129 Identities=12% Similarity=0.102 Sum_probs=97.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+........++..+. ......|.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~------------------~~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE------------------APPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT------------------SCCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC------------------CCCCCCHH
Confidence 346899999999999999999999999999999999999753210011111110 01222334
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcccccHHHhhccCEEEcCCChhHHHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr 640 (672)
--..+++.++...+.+++|||+.||+.|.+.||+ +|+|+++.+..++.||+++ ++++.+...++..+
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence 4466677777667789999999999999999999 9999988888888999999 45888888777544
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=4.1e-09 Score=95.90 Aligned_cols=140 Identities=19% Similarity=0.277 Sum_probs=90.9
Q ss_pred ccccccCCccccccceEEecccCCChHHHHHHHHHcccccccchHHHHHHhhcCCh-HHHhcccc--eEEEecCCCCCce
Q 005879 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADP-KEARAGIQ--EVHFLPFNPTDKR 410 (672)
Q Consensus 334 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~~~~~~f~~~~~~ 410 (672)
..||+|-|++.+..+. .. .+.+.++++.+++.++. .+.||++.|++.++... ........ ..++.+|++..++
T Consensus 13 ~~~tit~gnr~vt~v~--~~-~g~~e~elL~lAAs~E~-~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFI--PA-QGVDEKTLADAAQLASL-ADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEE--EC-TTSCHHHHHHHHHHTTS-SCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEE--ec-CCCCHHHHHHHHHHHhC-cCCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 4799999999998753 22 46788899988888774 45679999999875321 10000000 1235688887776
Q ss_pred EEEEEEeCCCeEEEEEcCcHHHHHHhccC-ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeec
Q 005879 411 TALTYIDNAGKMHRVSKGAPEQILNLAHN-KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL 489 (672)
Q Consensus 411 ~~v~~~~~~~~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~ 489 (672)
.++.+ +|+ .+.+|+++.|..++.. ..+.+..+.+.++.++.+|.+++++|... +++|+|++
T Consensus 89 ~Gv~v---~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 67643 564 4567998766555431 11223357778889999999999999865 89999999
Q ss_pred cCCCCc
Q 005879 490 FDPPRH 495 (672)
Q Consensus 490 ~d~~r~ 495 (672)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.83 E-value=7.1e-09 Score=101.85 Aligned_cols=128 Identities=19% Similarity=0.260 Sum_probs=96.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... ...-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSVE-----------------RGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCCC-----------------CCCCCHH
Confidence 46789999999999999999999999999899999999875321 1111111110 1222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe---eEEccc-ccHHHhh-ccCEEEcCCChhHHHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVAD-ATDAARS-ASDIVLTEPGLSVIISAVLTSR 640 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gIamg~-~~~~~k~-~ad~v~~~~~~~~i~~~i~~gr 640 (672)
--..+++.++...+.+++|||+.||+.|++.||+ +|++|+ ..+..++ .||+++ +++..+.+.++.++
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 4567778888778889999999999999999999 999985 4455555 799998 55888888887653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.82 E-value=2.4e-09 Score=107.55 Aligned_cols=67 Identities=25% Similarity=0.288 Sum_probs=56.6
Q ss_pred hHHHHHHH----HhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKR----LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~----l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++. ++...+.++++||+.||.+|++.||+|++|+|+.+..++.||+++.+++.+|+.++++.
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 45544444 44445679999999999999999999999999999999999999999999999988863
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=98.62 Aligned_cols=128 Identities=12% Similarity=0.048 Sum_probs=89.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC-CCCcccc-cccccccCCCccHHHHhhccCeecccCh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM-YPSSALL-GQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
+.|++.+.++.|++.|+++.++|+.....+....+.+|+.... +...... ...... ........|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 149 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK-------------ELDNSNGAC 149 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE-------------EEECTTSTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee-------------ccCCCCCCc
Confidence 6799999999999999999999999999999999999985211 1000000 000000 001123345
Q ss_pred hhHHHHHHHH-hhCCCEEEEECCCccCHHHHhh----CCeeEEcccccHHHhhccCEEEcCCChhHHHHH
Q 005879 571 EHKYEIVKRL-QARKHICGMTGDGVNDAPALKK----ADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 571 ~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~----A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~ 635 (672)
..+...+..+ +...+.++++||+.||++|++. +.++++++++.+..+..||+++. +++.+.+.
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~--~~~el~~~ 217 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR--NVAELASL 217 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES--SHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC--CHHHHHHh
Confidence 6676666544 6678899999999999999976 45556666778888999999984 46666554
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.76 E-value=8.6e-09 Score=99.84 Aligned_cols=124 Identities=5% Similarity=-0.055 Sum_probs=89.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+. ..+....+.+|+.... ...+.+.... .....|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccCC-----------------CCCCChH
Confidence 35689999999999999999999998 3445666777764211 1111111100 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+.||++|++.||++++|.|+.+..+ .||+++.+++..++..+++
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHHH
Confidence 4456777777777889999999999999999999999998888887 8999998777666666553
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.72 E-value=5.2e-08 Score=93.59 Aligned_cols=129 Identities=15% Similarity=0.112 Sum_probs=93.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+.... ......+.+... .......|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~~~--------------~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDSDRV--------------VGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-EEEEEECTTSCE--------------EEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-cceeEEcCCceE--------------EeeecCCCc
Confidence 5689999999999999 999999999999999999999986321 011111111000 001124678
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.|...++.++..++.++|+||+.||++|.+.||+++++.. .+..++.++.++..+++..+...++
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHA-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESC-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECC-cHHHHHHHhhhccccchHHHHHHHH
Confidence 8999999999888999999999999999999999999854 4445544443322366888877664
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.71 E-value=7.9e-09 Score=102.94 Aligned_cols=56 Identities=23% Similarity=0.182 Sum_probs=46.2
Q ss_pred hhHHHHHHHHhh-----CCCEEEEECCCccCHHHHhhCCeeEEccccc-HHHhhccCEEEcC
Q 005879 571 EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADIGIAVADAT-DAARSASDIVLTE 626 (672)
Q Consensus 571 ~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~-~~~k~~ad~v~~~ 626 (672)
..|...++.+.+ ..+.|++|||+.||.+||+.|++||||||+. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 357666665543 4568999999999999999999999999998 7788889988754
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-08 Score=96.85 Aligned_cols=124 Identities=10% Similarity=0.041 Sum_probs=85.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+.|++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.++... .....|+-
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~~~ 151 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTLA-----------------KGKPDPDI 151 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhCC-----------------CCCCChHH
Confidence 678999999999999999999999754 66778888875321 1111111100 11122333
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
-..+++.++...+.+++|||+.||+.|.+.||++++|.++.+..+ .||+++.+.+...+..++++
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 367778888777889999999999999999999999998777776 89999987766666666654
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=2e-08 Score=97.79 Aligned_cols=127 Identities=9% Similarity=0.083 Sum_probs=93.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++... .....|+
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 146 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLDG-----------------KLSTKED 146 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------SSCSHHH
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCCC-----------------CCCCCHH
Confidence 56799999999999999999999999998889999999875321 1111111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe---eEEcccccHHH--hhccCEEEcCCChhHHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDAA--RSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gIamg~~~~~~--k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
--..+++.++...+.+++|||+.||++|++.||+ +|++|++.... +..||+++. +++.+...+...
T Consensus 147 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~~ 217 (226)
T 3mc1_A 147 VIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILEL 217 (226)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHTC
T ss_pred HHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHHH
Confidence 3456677777777789999999999999999999 88888655433 578999994 578888777643
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.68 E-value=5e-08 Score=97.77 Aligned_cols=127 Identities=14% Similarity=0.165 Sum_probs=90.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ....+.++... .....|.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~-----------------~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP-----------------AGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCccC-----------------CCCCCHH
Confidence 45689999999999999999999999988888888877764221 11122111110 1122344
Q ss_pred hHHHHHHHHhhCC-CEEEEECCCccCHHHHhhCC---eeEEcccc------------------------cHHHhhc-cCE
Q 005879 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-SDI 622 (672)
Q Consensus 572 ~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~---vgIamg~~------------------------~~~~k~~-ad~ 622 (672)
--..+++.++... +.+++|||+.||++|++.|| +++++|++ .+..++. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4567778887776 78999999999999999999 67778765 3445555 999
Q ss_pred EEcCCChhHHHHHHHH
Q 005879 623 VLTEPGLSVIISAVLT 638 (672)
Q Consensus 623 v~~~~~~~~i~~~i~~ 638 (672)
++ +++..+...+..
T Consensus 245 v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 245 TI--ETMQELESVMEH 258 (267)
T ss_dssp EE--SSGGGHHHHHHH
T ss_pred ec--cCHHHHHHHHHH
Confidence 98 457778777654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.64 E-value=4.9e-08 Score=94.60 Aligned_cols=116 Identities=15% Similarity=0.172 Sum_probs=86.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.+++.+.++.|++.|++++++|+..........+.+|+.... ...+.+.... .....|.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccC-----------------CCCCChH
Confidence 45689999999999999999999999988888888888874211 1111111100 1112244
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc----ccccHHHhhccCEEEcC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam----g~~~~~~k~~ad~v~~~ 626 (672)
--..+++.++...+.+++|||+.||++|++.||++++| +++.+..+..||+++.+
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~ 213 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 213 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECC
Confidence 45667777777778899999999999999999999999 66666678899999854
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.63 E-value=5.9e-08 Score=94.68 Aligned_cols=127 Identities=13% Similarity=0.096 Sum_probs=93.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.... .....|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS-----------------YGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS-----------------CCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC-----------------CCCCChH
Confidence 35689999999999999999999999998888888888885321 1112111110 1222234
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe---eEEcc-cccHHHhhc-cCEEEcCCChhHHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gIamg-~~~~~~k~~-ad~v~~~~~~~~i~~~i~~g 639 (672)
--..+++.++...+.+++|||+.||+.|++.||+ +|++| ++.+..++. ||+++ +++..+...++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 4456667777667789999999999999999999 77777 566666665 99998 4588888777643
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-08 Score=103.53 Aligned_cols=132 Identities=16% Similarity=0.168 Sum_probs=89.5
Q ss_pred CCCcchHHHHHHHHhC-CCcEEEEcCC---------------------cHHHHHHHHHHhCCCCCCCCCccccccccccc
Q 005879 492 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDES 549 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~-Gi~v~~~TGd---------------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 549 (672)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~--- 198 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPE--- 198 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCT---
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCC---
Confidence 3567899999999988 9999888866 33444555555665311100000000000
Q ss_pred CCCccHHHHhhccCeecccCh--hhHHHHHH----HHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEE
Q 005879 550 IAALPIDELIEKADGFAGVFP--EHKYEIVK----RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (672)
Q Consensus 550 ~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~----~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v 623 (672)
...+....| ..|...++ .++...+.++++||+.||.+|++.||+|++|+++.+..++.||++
T Consensus 199 ------------~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 199 ------------DSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp ------------TEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred ------------CceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 001222222 24544444 444445679999999999999999999999999999999999999
Q ss_pred EcCCChhHHHHHHHH
Q 005879 624 LTEPGLSVIISAVLT 638 (672)
Q Consensus 624 ~~~~~~~~i~~~i~~ 638 (672)
+.+++.+|+.++++.
T Consensus 267 ~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 267 TDSEYSKGITNTLKK 281 (289)
T ss_dssp CSSCHHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHH
Confidence 999999999998873
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.57 E-value=5.5e-08 Score=94.16 Aligned_cols=124 Identities=17% Similarity=0.095 Sum_probs=84.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+.+++.+.++.|++.|+++.++|+..........+.+|+.... ...+...... .....|.-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----------------~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVT-----------------HHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCS-----------------SCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcC-----------------CCCCChHH
Confidence 3589999999999999999999999988888888888775321 1111111100 01112233
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc----ccccHHHhhc-cCEEEcCCChhHHHHHHH
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSA-SDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam----g~~~~~~k~~-ad~v~~~~~~~~i~~~i~ 637 (672)
-..+++.++...+.++++||+.||++|++.||++++| +++.+..++. ||+++.+ ++.+...++
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 218 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIST--LGQLISVPE 218 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESS--GGGGC----
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECC--HHHHHHhhh
Confidence 3566677776677899999999999999999999888 4555556655 9999854 555555543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.56 E-value=6.5e-08 Score=94.54 Aligned_cols=126 Identities=9% Similarity=0.019 Sum_probs=95.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+... ......|.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEeccc-----------------CCCCcCHH
Confidence 35689999999999999999999999998888888888875321 111111110 01222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc----ccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam----g~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
--..+++.++...+.+++|||+.||+.|.+.||++++| +++.+..+..||+++ +++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 44567777777778899999999999999999999999 666666777899999 458888887764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.52 E-value=3.2e-07 Score=89.49 Aligned_cols=124 Identities=17% Similarity=0.150 Sum_probs=92.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.+... -.....|.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSEEA-----------------GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHHHH-----------------TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecccc-----------------CCCCcCHH
Confidence 4568999999999999 999999999998888888888875321 111111000 01122333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCC---eeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~---vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+. ||+.|.+.|| +++++|++.+..++.||+++. ++..+...++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeC--CHHHHHHHHH
Confidence 34667777777778899999997 9999999999 678888877878889999994 5777777664
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.9e-07 Score=91.03 Aligned_cols=124 Identities=9% Similarity=0.064 Sum_probs=87.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc---HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
+.|++.+.++.|++.|+++.++|+.. ........+.+|+.... ...+.+.+.. .....
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVL-----------------SYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT-----------------CCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheeccccC-----------------CCCCC
Confidence 46899999999999999999999998 77778888888875321 1111111000 11122
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc---ccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam---g~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
|+--..+++.++...+.+++|||+. ||+.|++.||++++| +++.+..+..+|+++ +++..+...++
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 3334566677766677899999999 999999999999999 444444455688887 45677776654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-07 Score=92.49 Aligned_cols=124 Identities=11% Similarity=0.091 Sum_probs=91.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+........+.+|+.... ..++.+... -.....|.
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 156 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEV-----------------RLFKPHQK 156 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTCHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhc-----------------ccCCCChH
Confidence 56789999999999999999999999998888888888875321 111111110 01122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc----ccccHHHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam----g~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+++.++...+.+++|||+.||+.|.+.||++++| +++.+..+..+|+++. ++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 157 VYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 44667777777778899999999999999999999999 4555666778999984 466666544
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-07 Score=92.45 Aligned_cols=124 Identities=13% Similarity=0.053 Sum_probs=88.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++... .....|.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLDG-----------------TRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------CCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEeccccC-----------------CCCCCHH
Confidence 46789999999999999999999999998899999999885321 1111111100 0111233
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCe---eEEcccccHH--HhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v---gIamg~~~~~--~k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+++.++.. .+.+++|||+.||+.|.+.||+ ++++|++... .+..||+++.+ ++.+.+.|
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 335666777777 7889999999999999999999 7777755443 35789999954 66666543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.48 E-value=8.1e-08 Score=97.76 Aligned_cols=67 Identities=24% Similarity=0.285 Sum_probs=58.5
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
+|...++.+.+ ..+.++++||+.||++|++.||+|++|+|+.+.+++.||+++.+++.+||+++|+.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 57666665544 34579999999999999999999999999999999999999999999999999873
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.48 E-value=3.7e-07 Score=91.56 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=90.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.++... .....|.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVV-----------------RGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSS-----------------SCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcC-----------------CCCCCHH
Confidence 467899999999999999999999999888888888887643211 1111111110 1122233
Q ss_pred hHHHHHHHHhhCC-CEEEEECCCccCHHHHhhCC---eeEEccc------------------------ccHHHhhc-cCE
Q 005879 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVAD------------------------ATDAARSA-SDI 622 (672)
Q Consensus 572 ~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~---vgIamg~------------------------~~~~~k~~-ad~ 622 (672)
--..+++.++... +.+++|||+.||+.|.+.|| ++|++|. +.+..++. ||+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 4467778888777 88999999999999999999 5677773 23445544 999
Q ss_pred EEcCCChhHHHHHHHH
Q 005879 623 VLTEPGLSVIISAVLT 638 (672)
Q Consensus 623 v~~~~~~~~i~~~i~~ 638 (672)
++ +++..+...+..
T Consensus 253 v~--~~~~el~~~l~~ 266 (277)
T 3iru_A 253 VI--DSVADLETVITD 266 (277)
T ss_dssp EE--SSGGGTHHHHHH
T ss_pred Ee--cCHHHHHHHHHH
Confidence 99 457777777754
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.5e-07 Score=89.56 Aligned_cols=119 Identities=16% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
.+.|++.+.++.|++.|+++.++|+....... ..+.+|+.... ...+..... ......|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSG-----------------FVRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcC-----------------CCCCCCcH
Confidence 35789999999999999999999999887777 77778774210 011111100 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+++.++...+.++++||+.||++|++.||++ ++|+++. . .||+++.+ +..+.+.+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECSS--TTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeCC--HHHHHHHH
Confidence 44577777877778899999999999999999997 8888776 3 68998854 55565543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.47 E-value=2.9e-07 Score=90.77 Aligned_cols=126 Identities=13% Similarity=0.075 Sum_probs=86.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+. |+........++.+.... .....|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCChH
Confidence 4678999999999999999999999887777666666 775321101222221111 1222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE-EcccccHH----HhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATDA----ARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI-amg~~~~~----~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+.||+.|.+.||++. ++.++... .+..||+++ +++..+...++
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 445677777777788999999999999999999954 44443322 234699998 45777777665
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=8.4e-08 Score=95.15 Aligned_cols=67 Identities=18% Similarity=0.150 Sum_probs=57.3
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhc-------cCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA-------SDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~-------ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.++++||+.||.+|++.|++|++|||+.+.+++. ||+++.+++.+|+.++|+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 46666655543 3457999999999999999999999999999999986 8899999999999998864
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.7e-07 Score=85.60 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=85.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhC--CCCCCCCCcccccccccccCCCcc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLG--MGTNMYPSSALLGQDKDESIAALP 554 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 554 (672)
++.|++.++|+.|+++|+++.++|+.+. ..+....+.+| +..... .....++..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~~~-------- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFM-CPHGPDDGC-------- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEE-ECCCTTSCC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE-cCCCCCCCC--------
Confidence 4678999999999999999999999985 45566677777 321000 000000000
Q ss_pred HHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe---eEEcccccHHHh----hccCEEEcCC
Q 005879 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----SASDIVLTEP 627 (672)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gIamg~~~~~~k----~~ad~v~~~~ 627 (672)
......|+-=..+++.++...+.++||||+.||+.|.+.||+ +|+.|++..... ..+|+++ +
T Consensus 98 ---------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 98 ---------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ---------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 012222333456777777777889999999999999999994 777776655544 4579998 4
Q ss_pred ChhHHHHHHH
Q 005879 628 GLSVIISAVL 637 (672)
Q Consensus 628 ~~~~i~~~i~ 637 (672)
++..+.+.+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4777776654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.44 E-value=4.3e-07 Score=89.44 Aligned_cols=126 Identities=12% Similarity=0.053 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+. |+.....+..++.+.... .....|+
T Consensus 108 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-----------------~~kp~~~ 169 (247)
T 3dv9_A 108 ERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-----------------YGKPNPE 169 (247)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-----------------CCCCCCH
Confidence 5678999999999999999999999887766666666 775321101122221110 1222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcccc--cH-H-HhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TD-A-ARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~--~~-~-~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+.||+.|.+.||++ |++.++ .. . .+..||+++. ++..+...++
T Consensus 170 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 170 PYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 44677788887778899999999999999999965 334333 22 2 2347999984 5777776665
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.42 E-value=4.7e-07 Score=88.29 Aligned_cols=123 Identities=13% Similarity=0.092 Sum_probs=82.1
Q ss_pred CCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh-
Q 005879 493 PRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP- 570 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p- 570 (672)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+.... . ....+.+. ..+..|
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~------------------~~~~k~~ 153 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDA------------------LDRNELP 153 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTC------------------SSGGGHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCCC------------------cCccchH
Confidence 568999999999999 9999999999988888888888875321 1 11111110 001111
Q ss_pred -hhHHHHHHHHh--hCCCEEEEECCCccCHHHHhhCC---eeEEcccccHHHh-h-ccCEEEcCCChhHHHHHHH
Q 005879 571 -EHKYEIVKRLQ--ARKHICGMTGDGVNDAPALKKAD---IGIAVADATDAAR-S-ASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 -~~K~~iv~~l~--~~~~~v~~iGDg~ND~~al~~A~---vgIamg~~~~~~k-~-~ad~v~~~~~~~~i~~~i~ 637 (672)
.--..+.+.++ ...+.+++|||+.||++|.+.|| +++++|++..... . .||+++.+ +..+...++
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l~ 226 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHHH
Confidence 11144556666 45678999999999999999999 5555565444333 2 38999854 455555543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.2e-07 Score=88.94 Aligned_cols=121 Identities=14% Similarity=0.068 Sum_probs=88.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++.. ......|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeecccc-----------------cCCCCChH
Confidence 46789999999999999999999999999999999999885321 111111110 01122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccc--cHHHhhccCEEEcCCChhHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~--~~~~k~~ad~v~~~~~~~~i~ 633 (672)
--..+++.++...+.+++|||+.||+.|.+.||+++++.+. .+..+..||+++.+ +..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHHH
Confidence 44677778877778899999999999999999999988642 34445789999854 54443
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.40 E-value=7.2e-07 Score=87.18 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc------ccccccccccCCCccHHHHhhccCee
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS------ALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
.+.|++.+.++.|++.|+++.++||.....+..+++.+|+..- +... .+.|... -
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~g~~~------------------~ 152 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYRDGRYTGRIE------------------G 152 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEETTEEEEEEE------------------S
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEECCEEeeeec------------------C
Confidence 4689999999999999999999999999999999999998521 1000 0111000 0
Q ss_pred cccChhhHHHHHHHH----h---hCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005879 566 AGVFPEHKYEIVKRL----Q---ARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l----~---~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
....+..|...++.+ . ...+.++++||+.||++|++.||+++++..
T Consensus 153 ~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~ 205 (232)
T 3fvv_A 153 TPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANP 205 (232)
T ss_dssp SCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESC
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECc
Confidence 111234565554433 2 334789999999999999999999999953
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=2.3e-07 Score=93.91 Aligned_cols=128 Identities=10% Similarity=0.026 Sum_probs=90.3
Q ss_pred CCCcchHHHHHHHHhCCC--cEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccC
Q 005879 492 PPRHDSAETIRRALNLGV--NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi--~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (672)
++.|++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ..++.++.... ........
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~-------------~~~~~Kp~ 206 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRT-------------DTLVCKPH 206 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSC-------------SSCCCTTS
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCC-------------cccCCCcC
Confidence 567899999999999999 99999999998889999999986421 11111111000 00112223
Q ss_pred hhhHHHHHHHHhhCC-CEEEEECCCccCHHHHhhCCeeEEcccccHHH------hhccCEEEcCCChhHHHHHH
Q 005879 570 PEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 570 p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~------k~~ad~v~~~~~~~~i~~~i 636 (672)
|+--..+++.++... +.+++|||+.||+.|.+.||+|.+|+++.+.. ...||+++. ++..+..++
T Consensus 207 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 207 VKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 444456677777776 88999999999999999999999998654433 337889884 466655443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.40 E-value=3.7e-07 Score=88.89 Aligned_cols=126 Identities=19% Similarity=0.240 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcc-------cccccccccCCCccHHHHhhccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSA-------LLGQDKDESIAALPIDELIEKAD 563 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 563 (672)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.. +.+.... +.+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~----------------- 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE----------------- 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT-----------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC-----------------
Confidence 578999999999999999999999999999999999999863 1111000 011000
Q ss_pred eecccChhhHHHHHHHHhhC-C-CEEEEECCCccCHHHHhhCCeeEEcccc--cHHHhhccCEEEcCCChhHHHHHH
Q 005879 564 GFAGVFPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~-~-~~v~~iGDg~ND~~al~~A~vgIamg~~--~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
......+..|-..++.+.+. | +.++++||+.||+.|.+.||++|+++.. .+.....+|+++. ++..+...+
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 00011122454454443322 2 5799999999999999999999888743 3444557899884 465554443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.39 E-value=6.5e-07 Score=87.34 Aligned_cols=122 Identities=9% Similarity=0.043 Sum_probs=85.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.... .....|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDTG-----------------TIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSSS-----------------CCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEcccccC-----------------CCCCChH
Confidence 35789999999999999999999999999999999999975321 1111111100 1122334
Q ss_pred hHHHHHHHHhhCCC-EEEEECCCccCHHHHhhCCe-eEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~-~v~~iGDg~ND~~al~~A~v-gIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+ .+++|||+.||+.|.+.||+ +|.++++.+ ..+|+++ +++..+...+.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 44677788877777 89999999999999999997 677776554 3577777 45777776664
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.39 E-value=2.7e-07 Score=91.25 Aligned_cols=122 Identities=17% Similarity=0.132 Sum_probs=86.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC-----------------CCCcCHH
Confidence 46689999999999999999999999998889999999975321 1111111100 1112244
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc-cc----ccHHHhhccCEEEcCCChhHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-AD----ATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam-g~----~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
--..+++.++...+.+++|||+.||++|.+.||+++.. .. +.+..+..||+++. ++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 45667777777777899999999999999999998543 32 23445678999984 3555443
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=6.1e-07 Score=88.21 Aligned_cols=124 Identities=14% Similarity=0.075 Sum_probs=87.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccC-----------------CCCCCHH
Confidence 46799999999999999999999999998888888899875321 1111111110 1222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE---EcccccHHHhhcc-CEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI---AVADATDAARSAS-DIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI---amg~~~~~~k~~a-d~v~~~~~~~~i~~~i 636 (672)
--..+++.++...+.+++|||+.||+.|.+.||+.. ..|++.+..+..+ |+++. ++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeC--CHHHHHHHH
Confidence 445677777777778999999999999999999554 4454433344567 99884 577776655
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.37 E-value=4.7e-07 Score=88.06 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=88.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+. ......|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcC-----------------CCCCCChH
Confidence 45789999999999999999999999988888889999874211 111111110 01223355
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcc--cccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg--~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+.||++|.+.||+. |++. .+.+.. ..+|+++. ++..+...+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 55677777877777899999999999999999988 6654 322222 57898884 4777776654
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.36 E-value=3.1e-07 Score=89.71 Aligned_cols=124 Identities=9% Similarity=0.057 Sum_probs=89.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.... ..++.+.... .....|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEecccC-----------------CCCCCHH
Confidence 46789999999999999999999999988888888888874321 1111111110 1223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc----cccHHHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg----~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+++.++...+.+++|||+.||+.|.+.||+++++- +..+..+..+|+++. ++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 456677777777778999999999999999999999983 333444567899884 466665544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.32 E-value=9.2e-07 Score=88.00 Aligned_cols=128 Identities=16% Similarity=0.047 Sum_probs=88.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ...++.++... ......|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~~~----------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSWVG----------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGGGT----------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhhcC----------------cCCCCChH
Confidence 35689999999999999999999999998888888888874211 00011111100 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcccc-------cHHHh-hccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA-------TDAAR-SASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~-------~~~~k-~~ad~v~~~~~~~~i~~~i~~ 638 (672)
--..+++.++...+.+++|||+.||+.|.+.||++ |.+.++ .+..+ ..||+++ +++..+.+.++.
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 33566677776778899999999999999999998 444433 23333 4589999 558888888764
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.6e-06 Score=82.70 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=87.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++... .....|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCC-----------------CCCCCHH
Confidence 35689999999999999999999999888888888888875321 1111111100 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc---ccccHHHhh---ccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARS---ASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam---g~~~~~~k~---~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+. ||+.|.+.||++++. |.+...... .+|+++. ++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 33566677777777899999998 999999999998665 444443332 6899884 4777766654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.4e-06 Score=85.21 Aligned_cols=123 Identities=13% Similarity=0.092 Sum_probs=87.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+ .|+++.++|+..........+.+|+.... ..++.+.... .....|.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCC-----------------CCCCCHH
Confidence 45789999999999 99999999999888888888888875321 1111111100 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEcccccH--HHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIamg~~~~--~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+++.++...+.+++|||+. ||+.|.+.||++++|.+... ..+..+|+++.+ +..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHHH
Confidence 34556666766678899999995 99999999999999985443 556689999944 66665543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.30 E-value=7e-07 Score=88.33 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=88.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+........+.+.+|+.- ..++.++.. -.....|.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f----~~~~~~~~~-----------------~~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW----DMLLCADLF-----------------GHYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC----SEECCHHHH-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc----ceEEeeccc-----------------ccCCCCHH
Confidence 3568999999999985 9999999999888888888888741 111111100 01122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEccc--------ccHHH--hhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD--------ATDAA--RSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~--------~~~~~--k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+.||+.|.+.||++++|.+ +.+.. +..||+++ +++..+...+.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 4456777777777889999999999999999999999986 22233 66799999 45777777664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.28 E-value=9.8e-07 Score=86.75 Aligned_cols=138 Identities=14% Similarity=0.067 Sum_probs=90.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHH-hhccCe-ecccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL-IEKADG-FAGVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v-~~~~~ 569 (672)
++.|++.+.|+.|+++|+++.++|+.+...+..+.+ |+... ..++....... ...+... .+.... +.+..
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~---~~v~~~~~~~~---~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK---DRIYCNHASFD---NDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG---GGEEEEEEECS---SSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC---CeEEeeeeEEc---CCceEEecCCCCcccccccc
Confidence 578999999999999999999999999888877776 65321 22222211100 0000000 000000 11113
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhc--cCEEEcCCChhHHHHHHHHH
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~--ad~v~~~~~~~~i~~~i~~g 639 (672)
+..|..+++.++...+.++|+||+.||++|.+.||+.++.....+..+.. +|+++ +++..+...+...
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 55788999999888899999999999999999999998764323334333 67766 5688888777644
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-06 Score=87.78 Aligned_cols=114 Identities=15% Similarity=0.013 Sum_probs=82.2
Q ss_pred CCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 493 PRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+.. . ..++.+.+.. .....|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 468999999999999 99999999999888888888888752 1 2222222111 1112234
Q ss_pred hHHHHHHHHhh-------CCCEEEEECCCccCHHHHhhCCeeEEc---ccccHHHhh-ccCEEEcC
Q 005879 572 HKYEIVKRLQA-------RKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARS-ASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~-------~~~~v~~iGDg~ND~~al~~A~vgIam---g~~~~~~k~-~ad~v~~~ 626 (672)
--..+++.++. ..+.+++|||+.||++|++.||+++++ +++.+..++ .||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 44566777776 667899999999999999999977666 544444444 59999865
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.25 E-value=5.2e-07 Score=89.32 Aligned_cols=121 Identities=16% Similarity=0.114 Sum_probs=79.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH-HHhCCCCCCCCCcccccc--cccccCCCccHHHHhhccCeeccc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGQ--DKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia-~~~gi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
++.|++.+.++.|++.|+++.++|+.......... +..|+... -..++.++ .. .....
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~--f~~~~~~~~~~~-----------------~~~Kp 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL--FSHIVLGDDPEV-----------------QHGKP 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT--SSCEECTTCTTC-----------------CSCTT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh--eeeEEecchhhc-----------------cCCCC
Confidence 46789999999999999999999999865544332 21233211 01111111 00 01112
Q ss_pred ChhhHHHHHHHHhhCC--CEEEEECCCccCHHHHhhCC---eeEEcccccHHHhhccCEEEcCCChhHHH
Q 005879 569 FPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~--~~v~~iGDg~ND~~al~~A~---vgIamg~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
.|+--..+++.++... +.+++|||+.||+.|.+.|| ++|++|++.+..+..||+++.+ +..+.
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~s--l~el~ 240 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNS--LQDFQ 240 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSC--GGGCC
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecC--HHHhh
Confidence 2333345556665555 78999999999999999999 6666787777788899999854 54443
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.5e-06 Score=85.66 Aligned_cols=123 Identities=9% Similarity=0.020 Sum_probs=88.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+........+.+.+|+.- ..++.++... .....|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f----~~~~~~~~~~-----------------~~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW----DVIIGSDINR-----------------KYKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC----SCCCCHHHHT-----------------CCTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe----eEEEEcCcCC-----------------CCCCCHH
Confidence 4578999999999997 9999999999988888889998741 1111111000 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHH----------HhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA----------ARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~----------~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
-=..+++.++...+.+++|||+.||+.|.+.||++++|.+.... .+..+|+++ +++..+...+..
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 33456666666677899999999999999999999999753221 356789999 558888887754
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.8e-06 Score=84.90 Aligned_cols=122 Identities=14% Similarity=0.158 Sum_probs=84.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+. . + ..++.+.... ...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f-~~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-F-DFALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-C-SEEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-e-eEEEecCCCC-----------------CCCCCHHH
Confidence 4589999999999999999999999888888888888874 2 1 1222221110 11222333
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee---EEccccc-HHHh-hccCEEEcCCChhHHHHHH
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADAT-DAAR-SASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg---Iamg~~~-~~~k-~~ad~v~~~~~~~~i~~~i 636 (672)
=..+++.++...+.+++|||+.||+.|.+.||+. +++|++. +..+ ..||+++. ++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 3566677777778899999999999999999994 5555433 3444 36898884 466665544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.23 E-value=5.4e-07 Score=94.99 Aligned_cols=115 Identities=14% Similarity=0.143 Sum_probs=74.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
-.+.|+.++.|+.|+++|++|+|+||.....++.+|+++|+.... +...+.|..+...-+. .+...+. ...--...
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~i-p~~~Vig~~l~~~~dG-~~tg~~~--~~~p~~~~ 295 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKM-KEEKVLGLRLMKDDEG-KILPKFD--KDFPISIR 295 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCC-CGGGEEEECEEECTTC-CEEEEEC--TTSCCCST
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCC-CcceEEEeEEEEecCC-ceeeeec--CccceeCC
Confidence 347899999999999999999999999999999999999875332 2222223222100000 0000000 00011235
Q ss_pred hhHHHHHHHHhhC---CCEEEEECCCccCHHHHhh-CCeeEEc
Q 005879 571 EHKYEIVKRLQAR---KHICGMTGDGVNDAPALKK-ADIGIAV 609 (672)
Q Consensus 571 ~~K~~iv~~l~~~---~~~v~~iGDg~ND~~al~~-A~vgIam 609 (672)
+.|...++.+-.. ...++++|||.||.+||+. +|.++++
T Consensus 296 ~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 296 EGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp HHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 6798888876432 2358899999999999986 5655555
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-06 Score=84.97 Aligned_cols=119 Identities=12% Similarity=0.035 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCC-CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.++.|++.| +++.++|+..........+.+|+.... ..++ ....-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~----------------------~~~kpk~ 160 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--DHIE----------------------VMSDKTE 160 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--SEEE----------------------EESCCSH
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--heee----------------------ecCCCCH
Confidence 45789999999999999 999999998888888888888874211 0000 0111233
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc-------ccccHHHhhcc-CEEEcCCChhHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV-------ADATDAARSAS-DIVLTEPGLSVIISAV 636 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam-------g~~~~~~k~~a-d~v~~~~~~~~i~~~i 636 (672)
+--..+++.++...+.+++|||+. ||+.|.+.||+++++ |++.+..+..+ |+++ +++..+...+
T Consensus 161 ~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 161 KEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred HHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 334566677777778899999996 999999999999887 34444434444 8887 4477666543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.22 E-value=3e-06 Score=82.71 Aligned_cols=124 Identities=10% Similarity=0.075 Sum_probs=87.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ...+.+.... .....|.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTG-----------------FQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------SCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccC-----------------CCCCChH
Confidence 4678999999999999 999999999988888888888875321 1111111100 1122233
Q ss_pred hHHHHHHHHh-hCCCEEEEECCCc-cCHHHHhhCCeeEEc-c--cccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQ-ARKHICGMTGDGV-NDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~-~~~~~v~~iGDg~-ND~~al~~A~vgIam-g--~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++ ...+.+++|||+. ||+.|.+.||++..+ + +..+..+..||+++. +++.+.+.+.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 3355566666 5567899999998 999999999995443 3 335666778999994 5777777664
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=2.6e-06 Score=82.29 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHH
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (672)
++.|++.++|+.|+++|+++.++|+.. ...+....+.+|+. +..........+. ...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~-~~~---- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQG-SVE---- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTC-SSG----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCC-ccc----
Confidence 678999999999999999999999998 46677788888875 1111111100000 000
Q ss_pred HHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee--EEc--ccc-cHHHhhccCEEEcCCChhH
Q 005879 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSV 631 (672)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg--Iam--g~~-~~~~k~~ad~v~~~~~~~~ 631 (672)
. .........-.|+--..+++.+....+.++||||+.||+.|.+.||+. |.+ |.. .+.....+|+++ +++..
T Consensus 122 ~-~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 122 E-FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp G-GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred c-cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 0 000001222334444566777777777899999999999999999964 333 432 233344689988 45777
Q ss_pred HHHHHH
Q 005879 632 IISAVL 637 (672)
Q Consensus 632 i~~~i~ 637 (672)
+.+.+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.22 E-value=2e-06 Score=85.37 Aligned_cols=123 Identities=13% Similarity=0.126 Sum_probs=88.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+.... ..++.++... .....|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccC-----------------CCCCCHH
Confidence 56799999999999 9999999999998888888888875321 1111111110 1222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccc---------------------------cHHHhhccCEEE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARSASDIVL 624 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~---------------------------~~~~k~~ad~v~ 624 (672)
--..+++.++...+.+++|||+.||+.|.+.||++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 45667777776677899999999999999999999998765 223345689988
Q ss_pred cCCChhHHHHHHH
Q 005879 625 TEPGLSVIISAVL 637 (672)
Q Consensus 625 ~~~~~~~i~~~i~ 637 (672)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 45777777664
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.21 E-value=2e-06 Score=83.43 Aligned_cols=123 Identities=9% Similarity=0.054 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeec--ccC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA--GVF 569 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~ 569 (672)
++.+++.+.++.++. ++.++|+..........+.+|+.... +..++.++... .. ...
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~-----------------~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG-----------------ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC-----------------TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-cceEEeccccc-----------------cCCCCcC
Confidence 346788888887764 89999999988888888888875211 01111111100 01 122
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcccccH-------HHhhc-cCEEEcCCChhHHHHHHH
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~~~-------~~k~~-ad~v~~~~~~~~i~~~i~ 637 (672)
|.--..+++.++...+.+++|||+.||++|++.||++ ++++++.+ ..++. ||+++. +++.+...++
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 3334566777777778899999999999999999998 66765543 46666 999985 4666666553
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.21 E-value=2.8e-07 Score=88.47 Aligned_cols=119 Identities=10% Similarity=0.068 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+.... ..++.+... -.....|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 3578999999999999 999999999988888888777764210 011111100 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEccc----ccHHHhhccCEEEcCCChhHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD----ATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~----~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
--..+++.++...+.+++|||+.||++|.+.||++++|.+ +.+..++ ||+++.+ +..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHH
Confidence 3466677777667789999999999999999999999843 3455555 9999854 44443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.20 E-value=2.2e-06 Score=81.65 Aligned_cols=121 Identities=10% Similarity=0.099 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+.... ..++.+.... .....|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVK-----------------EYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcC-----------------CCCCCHH
Confidence 35689999 9999999 999999999988888888888875321 1111111110 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc----ccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam----g~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++ .+.+++|||+.||+.|.+.||++.++ +++.+..+..+|+++. ++..+...+.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 4456677777 56799999999999999999999887 3333334556898884 4666666553
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.3e-06 Score=83.51 Aligned_cols=122 Identities=13% Similarity=0.092 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++ |+++.++|+..........+.++-. + ..++.+.+.. .....|.
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~---f-d~i~~~~~~~-----------------~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE---F-DHIITAQDVG-----------------SYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC---C-SEEEEHHHHT-----------------SCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc---c-CEEEEccccC-----------------CCCCCHH
Confidence 567899999999999 8999999999887766665543311 1 1111111100 1223344
Q ss_pred hHHHH---HHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEccccc-----------HHHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEI---VKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~i---v~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIamg~~~-----------~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
-.... ++.++...+.+++|||+. ||+.|.+.||++++|.+.. +..+..||+++ +++..+.+.+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 33445 555666677899999996 9999999999999995422 33447899999 4577777766
Q ss_pred H
Q 005879 637 L 637 (672)
Q Consensus 637 ~ 637 (672)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.11 E-value=4.2e-06 Score=78.68 Aligned_cols=107 Identities=12% Similarity=0.019 Sum_probs=73.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+.|++.+.++.|++.|+++.++|+... .+....+.+|+.... ...+.+... ......|+-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~~ 142 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSG-----------------FKRKPNPES 142 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGC-----------------CCCTTSCHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeecccc-----------------CCCCCCHHH
Confidence 568999999999999999999998864 466677777764211 011111100 011122333
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad 621 (672)
-..+++.++.. .+++|||+.||++|++.||+++++.+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 35566666655 799999999999999999999998876666666554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.09 E-value=2.7e-06 Score=81.87 Aligned_cols=119 Identities=8% Similarity=0.016 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+.... ..++.++ . ...-.|+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~--~-----------------~~Kp~p~ 141 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSS--P-----------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEEC--S-----------------SCCSHHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeeecCC--C-----------------CCCCChH
Confidence 356899999999999 9999999999888888888888885321 1111111 0 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe---eEEcccc-cHHHh-hccCEEEcCCChhHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIIS 634 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gIamg~~-~~~~k-~~ad~v~~~~~~~~i~~ 634 (672)
-=..+++.++...+.+++|||+.||+.|.+.||+ ++++|++ .+..+ ..+|+++.+ +..+..
T Consensus 142 ~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 2244555666566789999999999999999999 7777765 44444 368999854 555543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.07 E-value=3e-06 Score=84.69 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=87.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+.|++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+... ......|+-
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~~ 166 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSEAA-----------------GWPKPDPRI 166 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHHHH-----------------SSCTTSHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeeccc-----------------CCCCCCHHH
Confidence 5689999999999999999999987654 57778888874321 111111100 012334455
Q ss_pred HHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEcccccHHH------hhccCEEEcCCChhHHHHHHHH
Q 005879 573 KYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIamg~~~~~~------k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
-..+++.++...+.+++|||+. ||+.|.+.||+++++.+..... ...+|+++ +++..+...+..
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~~ 237 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALDC 237 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHHH
Confidence 5677788877778899999997 9999999999999997433222 23689998 457777777653
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.1e-05 Score=74.31 Aligned_cols=135 Identities=15% Similarity=0.101 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---HHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+.... ..++...+... .......
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~KP 98 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEKP 98 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCTT
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCCc
Confidence 5789999999999999999999998876 7888888999985321 11111111000 0012233
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEc-ccccH-----HHh-hccCEEEcCCChhHHHHHHHHHH
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV-ADATD-----AAR-SASDIVLTEPGLSVIISAVLTSR 640 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIam-g~~~~-----~~k-~~ad~v~~~~~~~~i~~~i~~gr 640 (672)
.|+--..+++.+....+.+++|||+ .+|+.+-+.||+.... .++.. ... ..+|+++...++..+.++++..+
T Consensus 99 ~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 99 DKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 3444566777777777889999999 7999999999997655 23221 111 26789997567999998887765
Q ss_pred H
Q 005879 641 A 641 (672)
Q Consensus 641 ~ 641 (672)
.
T Consensus 179 ~ 179 (189)
T 3ib6_A 179 K 179 (189)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=3.1e-05 Score=72.51 Aligned_cols=134 Identities=13% Similarity=0.207 Sum_probs=80.5
Q ss_pred ccccCCccccccceEEecc--cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHH--hcccceEEEecCCCCCceE
Q 005879 336 GTLTLNKLTVDKNLIEVFT--KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA--RAGIQEVHFLPFNPTDKRT 411 (672)
Q Consensus 336 GTLT~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~ 411 (672)
||||+|+++|..+. .+. .+.+.++++.+++.++. .+.||++.||+.++...... .......+..| .+..
T Consensus 1 GTLT~G~p~V~~v~--~~~~~~~~~~~~lL~laaa~E~-~SeHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G~Gv- 73 (185)
T 2kmv_A 1 SFTMHGTPVVNQVK--VLTESNRISHHKILAIVGTAES-NSEHPLGTAITKYCKQELDTETLGTCIDFQVVP---GCGI- 73 (185)
T ss_dssp CCCCSCCCEEEEEE--ECSCTTTSCHHHHHHHHHHGGG-SSSCHHHHHHHHHHHHHHTCSCCCCCBCCEEET---TTEE-
T ss_pred CCCcCCcEEEEEEE--ecCCcCCCCHHHHHHHHHHHHc-cCCCHHHHHHHHHHHhhcCCCCCCCccceEEec---cceE-
Confidence 89999999998753 332 24567778887777654 44579999999875321000 00111222222 1111
Q ss_pred EEEEEeCC-----------------------------------------------CeEEEEEcCcHHHHHHhccCChHHH
Q 005879 412 ALTYIDNA-----------------------------------------------GKMHRVSKGAPEQILNLAHNKSDIE 444 (672)
Q Consensus 412 ~v~~~~~~-----------------------------------------------~~~~~~~KGa~e~i~~~~~~~~~~~ 444 (672)
...+...+ .+.+.+..|++++|.+..- ..+
T Consensus 74 ~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~ 150 (185)
T 2kmv_A 74 SCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VIN 150 (185)
T ss_dssp EEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCC
T ss_pred EEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCC
Confidence 11111100 0114566799999876321 122
Q ss_pred HHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCC
Q 005879 445 RRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492 (672)
Q Consensus 445 ~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~ 492 (672)
+.+...+..+..+|..++.+|... .++|++++.|+
T Consensus 151 ~~~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 151 NDVNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 334556677888999999999876 89999999995
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.9e-06 Score=86.27 Aligned_cols=60 Identities=20% Similarity=0.256 Sum_probs=49.5
Q ss_pred hhHHHHHHHH-hhCCCEEEEECC----CccCHHHHhhCC-eeEEcccccHHHhhccCEEEcCCChh
Q 005879 571 EHKYEIVKRL-QARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEPGLS 630 (672)
Q Consensus 571 ~~K~~iv~~l-~~~~~~v~~iGD----g~ND~~al~~A~-vgIamg~~~~~~k~~ad~v~~~~~~~ 630 (672)
..|...++.| +...+.|++||| +.||.+||+.|+ +|++|+|+.+.+|+.||+|+.+++.+
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~~~ 261 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETAHE 261 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC---
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCcCC
Confidence 4577777777 333578999999 999999999999 69999999999999999999877653
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.92 E-value=8.6e-06 Score=76.84 Aligned_cols=93 Identities=10% Similarity=0.030 Sum_probs=68.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.++|+.|+++|+++.++||++ ...+..+.+.+|+..... .. .++....|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~-~~-----------------------~~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV-HR-----------------------EIYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE-EE-----------------------EESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc-ee-----------------------EEEeCchH
Confidence 578999999999999999999999999 688899999999853210 00 00111112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
+.-..+++.++...+.+++|||+.||+.+.+.||+...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 22344556666566789999999999999999998654
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=79.55 Aligned_cols=62 Identities=15% Similarity=0.115 Sum_probs=44.1
Q ss_pred HHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEccc----ccHHHhh---ccCEEEcCCChhHHHHHHH
Q 005879 574 YEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAVAD----ATDAARS---ASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIamg~----~~~~~k~---~ad~v~~~~~~~~i~~~i~ 637 (672)
..+.+.+....+.++||||+ .||+.|++.||++.++.+ +.+..++ .||+++. ++..+..-++
T Consensus 190 ~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~--~~~el~~~~~ 259 (266)
T 3pdw_A 190 EQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID--SLTEWIPYIE 259 (266)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES--SGGGGHHHHH
T ss_pred HHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC--CHHHHHHHhh
Confidence 45556666666789999999 799999999999777643 4455555 4999994 4666766554
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.2e-05 Score=80.40 Aligned_cols=61 Identities=20% Similarity=0.168 Sum_probs=45.5
Q ss_pred HHHHHHHhhCCCEEEEECCC-ccCHHHHhhCC---eeEEcccccHHHhh--------ccCEEEcCCChhHHHHHH
Q 005879 574 YEIVKRLQARKHICGMTGDG-VNDAPALKKAD---IGIAVADATDAARS--------ASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~---vgIamg~~~~~~k~--------~ad~v~~~~~~~~i~~~i 636 (672)
..+.+.+....+.++||||+ .||+.|.+.|| ++|++|++.....+ .+|+++ +++..+.+.+
T Consensus 194 ~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~--~~~~el~~~l 266 (268)
T 3qgm_A 194 REALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVF--NSLKDMVEAL 266 (268)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEE--CCHHHHHHHH
Confidence 45556666666789999999 69999999999 78888866544333 689998 4476666544
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.87 E-value=4e-06 Score=80.38 Aligned_cols=105 Identities=6% Similarity=-0.021 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH------hCCCCCCCCCcccccccccccCCCccHHHHhhccCee
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.... ..++.+... ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~~~-----------------~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASCQM-----------------GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHHHH-----------------TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeeccc-----------------CC
Confidence 356899999999999 999999999887776666555 4542110 011111000 01
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHH
Q 005879 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAA 616 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~ 616 (672)
....|+--..+++.++...+.+++|||+.||+.|.+.||+++++.++.+..
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~ 199 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGENW 199 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCC
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHH
Confidence 222344445677777777788999999999999999999999998654433
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.85 E-value=4.1e-05 Score=75.51 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+.... . .++. ...-.|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~i~~----------------------~~kp~~~ 166 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-RIEV----------------------VSEKDPQ 166 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-CEEE----------------------ESCCSHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-eeee----------------------eCCCCHH
Confidence 45789999999999 99999999999888888888888874321 0 0000 0112244
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEcc-cccH--------HHhhccCE-EEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVA-DATD--------AARSASDI-VLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIamg-~~~~--------~~k~~ad~-v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+. ||+.|.+.||+++++- .+.. .....+|+ ++ +++..+...+.
T Consensus 167 ~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 167 TYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 44566777777778899999999 9999999999998873 3221 11245787 66 45777776664
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.84 E-value=2e-05 Score=74.68 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.| ++.++|+.+........+.+|+.... ..++.+... ......|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSAL-----------------GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHHH-----------------SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 35699999999999999 99999999988888888888874321 111111100 01222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEccc
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~ 611 (672)
--..+++.++...+.+++|||+.||+.|.+.||+...+-+
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEEC
Confidence 4456677777777789999999999999999999988754
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.79 E-value=8.9e-05 Score=71.16 Aligned_cols=125 Identities=16% Similarity=0.135 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+.... ...+.+++. -.....|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~~-----------------~~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQV-----------------KNGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGGS-----------------SSCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--ccccccccc-----------------CCCcccHH
Confidence 35689999999999999999999999999999999999985321 111111111 01223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE----Ecc-cccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI----AVA-DATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI----amg-~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
-=..+++.++...+.++||||+.+|+.+-+.||+.. .-| +..+..+++.+.++.+ .+.+.+.++
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l~ 213 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHHH
Confidence 446677888877888999999999999999999853 224 3345555554333333 344555443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.71 E-value=1.2e-05 Score=77.89 Aligned_cols=108 Identities=19% Similarity=0.042 Sum_probs=68.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCcccccccccccCCCccH
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPI 555 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (672)
.++.|++.++|+.|+++|+++.++|+... ..+....+.+|+.-. .........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD---MVLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee---eEEEeecCCCCcee----
Confidence 46789999999999999999999999987 677778888887311 00000000000000
Q ss_pred HHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
+. ........-.|.-=..+.+.+....+.++||||+.||+.|.+.||+..
T Consensus 128 -~~-~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -LA-IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -TC-CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -ec-ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00 000001112232234556666666678999999999999999999865
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0001 Score=73.35 Aligned_cols=123 Identities=11% Similarity=0.144 Sum_probs=85.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|++ ++++.++|+.+...+....+.+|+.... ..++.+.+.. ...-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCCC-----------------CCCCCHH
Confidence 467999999999998 6999999999988888888899985321 1111111110 1222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCe--eEEcccccH---HHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADI--GIAVADATD---AARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v--gIamg~~~~---~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+++.++...+.++||||+ .||+.+-+.||+ .|.+..+.. .....+|+++. ++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 4466677777777789999995 999999999999 577754321 13346888884 466676655
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.70 E-value=8.3e-06 Score=80.65 Aligned_cols=52 Identities=19% Similarity=0.243 Sum_probs=42.7
Q ss_pred hHHHHHHHH-hhCCCEEEEECC----CccCHHHHhhCCe-eEEcccccHHHhhccCEE
Q 005879 572 HKYEIVKRL-QARKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARSASDIV 623 (672)
Q Consensus 572 ~K~~iv~~l-~~~~~~v~~iGD----g~ND~~al~~A~v-gIamg~~~~~~k~~ad~v 623 (672)
+|...++.+ +...+.|++||| |.||.+||+.|+. |++|+|+.+.+|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 566666665 334678999999 9999999999998 999999999999999986
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.62 E-value=6.8e-05 Score=72.55 Aligned_cols=118 Identities=20% Similarity=0.210 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++. +++.++|+.+.. .+.+|+.... ..++.+... -.....|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--AFALCAEDL-----------------GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--SEEEEHHHH-----------------TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--eeeEEcccc-----------------CCCCcCHH
Confidence 4568999999999998 999999987653 2334442110 001100000 01122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCeeEEc---c-cccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---A-DATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgIam---g-~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--..+++.++...+.+++|||+. ||+.|.+.||++.++ + +..+. +..+|+++ +++..+.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 44667777777778899999997 999999999999887 2 22222 66789998 45777777664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.60 E-value=3.2e-05 Score=68.32 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=68.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.... ..++.+.+. ......|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGEL-----------------GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHHH-----------------SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEeccC-----------------CCCCCCHH
Confidence 35688999999999999999999999888777777888764321 111111000 01222344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
--..+++.+....+.+++|||+.+|+.+.+.+|+....
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~ 116 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVY 116 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEE
Confidence 34556666666666799999999999999999985443
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00023 Score=67.59 Aligned_cols=95 Identities=9% Similarity=0.031 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+++|+++.++||.....+..+.. . ....++.+++.. ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 467999999999999999999999998876644332 1 111122221110 1222333
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCe-eEEcc
Q 005879 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI-GIAVA 610 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v-gIamg 610 (672)
-=...++.+... .+.++||||+.+|+.+-+.||+ .|++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 334455666553 3679999999999999999997 34443
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.55 E-value=6.4e-06 Score=78.47 Aligned_cols=107 Identities=8% Similarity=0.020 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.++.|++.|+++.++|+.+......+.+. +|+.... ..++.+... ....-.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA--DHIYLSQDL-----------------GMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHC--SEEEEHHHH-----------------TCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhe--eeEEEeccc-----------------CCCCCCH
Confidence 3568999999999999999999998764332221111 1211000 000000000 0112234
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHh
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k 617 (672)
+--..+++.++...+.+++|||+.||+.|.+.||+...+.+..+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~ 198 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIP 198 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHH
Confidence 44566777777777889999999999999999999988875544433
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.48 E-value=4.6e-05 Score=74.07 Aligned_cols=107 Identities=8% Similarity=-0.023 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH------hCCCCCCCCCcccccccccccCCCccHHHHhhccCee
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
++.|++.+.++.|++. +++.++|+........+.+. .|+.... ..++.+.+. ..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~~~~~~-----------------~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTYLSYEM-----------------KM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEEEHHHH-----------------TC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEEeeccc-----------------CC
Confidence 3568999999999998 99999999998877766533 3331100 000000000 01
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhh
Q 005879 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~ 618 (672)
....|+--..+++.++...+.+++|||+.||+.|.+.||++.++.++.+..++
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~ 224 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSH 224 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 22334545677788877778899999999999999999999999876554443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00017 Score=75.66 Aligned_cols=138 Identities=13% Similarity=0.094 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+........++.+++.... ........-...-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~------~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA------ENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH------HHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc------ccccccccCCCCCCHH
Confidence 5778999999999999999999999999888888889998643211122322221100 0000000000112222
Q ss_pred hHHHHHHHHh--------------hCCCEEEEECCCccCHHHHhhCCeeE-Ecccc------cHHH-hhccCEEEcCCCh
Q 005879 572 HKYEIVKRLQ--------------ARKHICGMTGDGVNDAPALKKADIGI-AVADA------TDAA-RSASDIVLTEPGL 629 (672)
Q Consensus 572 ~K~~iv~~l~--------------~~~~~v~~iGDg~ND~~al~~A~vgI-amg~~------~~~~-k~~ad~v~~~~~~ 629 (672)
-=...++.++ ...+.++||||+.+|+.+-+.||+.. ++..+ .+.. ...||+++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 2223333332 23567999999999999999999864 33332 1222 23689998 457
Q ss_pred hHHHHHHH
Q 005879 630 SVIISAVL 637 (672)
Q Consensus 630 ~~i~~~i~ 637 (672)
..+...++
T Consensus 367 ~eL~~~l~ 374 (384)
T 1qyi_A 367 GELRGVLD 374 (384)
T ss_dssp GGHHHHHS
T ss_pred HHHHHHHH
Confidence 77776653
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00024 Score=70.92 Aligned_cols=42 Identities=14% Similarity=0.000 Sum_probs=37.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 532 (672)
.++.+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88888888888888875
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00032 Score=69.18 Aligned_cols=116 Identities=10% Similarity=0.101 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.+.|+... +..+.+.+|+.... ..++.+++.. .....|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~F--d~i~~~~~~~-----------------~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKF--DFIADAGKCK-----------------NNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGC--SEECCGGGCC-----------------SCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccch--hhhHhhhccccccc--ceeecccccC-----------------CCCCcHH
Confidence 4678999999999999999998877643 45667888885321 1122221111 2233455
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcccccHHHhhccCEEEcCCChhHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVI 632 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~~~~~~k~~ad~v~~~~~~~~i 632 (672)
-=..+++.++-..+.++||||+.+|+.+-+.||+ .|++++..+ ...||+++.+ +..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi~~--l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEESS--GGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEECC--hHhC
Confidence 5567778888778889999999999999999998 555654333 2358999854 5544
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0012 Score=65.25 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=35.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 005879 493 PRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 532 (672)
+.+.+.++++.+++.|+++.++| |++........+.+|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 56789999999999999999999 99988888888888875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00025 Score=69.23 Aligned_cols=53 Identities=15% Similarity=0.148 Sum_probs=39.1
Q ss_pred HHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEc---cccc-HHHh---hccCEEEcC
Q 005879 574 YEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---SASDIVLTE 626 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIam---g~~~-~~~k---~~ad~v~~~ 626 (672)
..+.+.++...+.+++|||+ .||++|++.||+++++ |++. +..+ ..+|+++.+
T Consensus 183 ~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred HHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 44555666666789999999 7999999999998554 5444 4444 468998854
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00028 Score=70.27 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=35.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 532 (672)
++ |+++++|++++++|++++++| |++........+.+|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 35 899999999999999999999 88888888888888885
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0029 Score=58.00 Aligned_cols=131 Identities=12% Similarity=0.123 Sum_probs=76.1
Q ss_pred ccCCccccccceEEeccc--CCChHHHHHHHHHcccccccchHHHHHHhhcCChHHH--hcccceEEEecCCCCCceEEE
Q 005879 338 LTLNKLTVDKNLIEVFTK--GVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA--RAGIQEVHFLPFNPTDKRTAL 413 (672)
Q Consensus 338 LT~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~v 413 (672)
||+|+++|..+. .+.. +.+.++++.+++.++. .+.||++.|++.++...... .......+.+| .+...+
T Consensus 1 LT~G~p~V~~v~--~~~~~~~~~~~~lL~laaslE~-~SeHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G~Gv~a- 73 (165)
T 2arf_A 1 AGHMVPRVMRVL--LLGDVATLPLRKVLAVVGTAEA-SSEHPLGVAVTKYCKEELGTETLGYCTDFQAVP---GCGIGC- 73 (165)
T ss_dssp CCCCCCCEEEEE--ECCCTTTSCHHHHHHHHHHHHT-TSCSTTHHHHHHHHHHHHTCCCCCCEEEEEEET---TTEEEE-
T ss_pred CCCceeEEEEEE--eeCCcCCCCHHHHHHHHHHHHc-cCCChHHHHHHHHHHHhcCCCCCCCcCceEEec---CccEEE-
Confidence 799999998743 2221 2466777877777654 44579999999875321000 01112222222 122111
Q ss_pred EEEeC------------------------------CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005879 414 TYIDN------------------------------AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLA 463 (672)
Q Consensus 414 ~~~~~------------------------------~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 463 (672)
.+... ..+.+.+.-|++++|.+..-. .++.+...+..+..+|..++.
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLT---ISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCS---SCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCC---CCHHHHHHHHHHHhCCCeEEE
Confidence 12110 011234556999988653211 122344556677889999999
Q ss_pred EEeeecCCCCCCCCCCCeEEEEEeeccC
Q 005879 464 VAYQEVPEGRKDSPGGPWQFMGLMPLFD 491 (672)
Q Consensus 464 ~a~~~l~~~~~~~~e~~l~~lG~i~~~d 491 (672)
+|... .++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99876 8999999987
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00018 Score=70.93 Aligned_cols=51 Identities=20% Similarity=0.151 Sum_probs=43.1
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CccCHHHHhhCC-eeEEcccccHHHhhccC
Q 005879 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASD 621 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~A~-vgIamg~~~~~~k~~ad 621 (672)
.+|...++.|.+..+.|+++|| |.||.+||+.|+ +|++|+|+.+.+|..++
T Consensus 186 v~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~ 241 (246)
T 3f9r_A 186 WDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK 241 (246)
T ss_dssp CSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence 3687777777766789999999 699999999996 89999999888886544
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00084 Score=65.99 Aligned_cols=84 Identities=15% Similarity=0.049 Sum_probs=61.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcH----HHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeec
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
.++.|++.+.++.|+++|+++.++||++. ..+..-.+.+||..... . .++.
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-~------------------------~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND-K------------------------TLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST-T------------------------TEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc-c------------------------eeEe
Confidence 45678999999999999999999999975 37777788899963100 0 1222
Q ss_pred ccChhhHHHHHHHHhhC-CCEEEEECCCccCHHH
Q 005879 567 GVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPA 599 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~a 599 (672)
+.....|....+.+... -..++++||..+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 22234577777777764 4578999999999997
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00089 Score=64.39 Aligned_cols=95 Identities=11% Similarity=0.022 Sum_probs=62.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|+++|+++.++|+... .+....+.+|+.... ..++.+.+.. .....|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEIK-----------------AVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEeccccC-----------------CCCCCHH
Confidence 3568999999999999999999999876 467788888875321 1111111100 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCcc-CHHHHhhCCeeEEc
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVN-DAPALKKADIGIAV 609 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~N-D~~al~~A~vgIam 609 (672)
--..+++.++... ++|||+.+ |+.+.+.||+....
T Consensus 155 ~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEE
Confidence 3345556665433 99999999 99999999998664
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0015 Score=63.32 Aligned_cols=116 Identities=8% Similarity=0.001 Sum_probs=72.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.| ++.++|+.+...+....+.+|+..... ... ......|.
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~-~~~-----------------------~~~~~K~~ 150 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE-GRV-----------------------LIYIHKEL 150 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT-TCE-----------------------EEESSGGG
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC-eeE-----------------------EecCChHH
Confidence 57899999999999999 999999998888888888888742110 000 00000121
Q ss_pred hHHHHHHHHhhCCCEEEEECCCcc---CHHHHhhCCeeE-Ecccc-----cHHHhhc--cCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVN---DAPALKKADIGI-AVADA-----TDAARSA--SDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~N---D~~al~~A~vgI-amg~~-----~~~~k~~--ad~v~~~~~~~~i~~~i 636 (672)
--..+.+ +...+.+++|||+.| |+.+-+.||+.. .+..+ .+..++. +|+++. ++..+...+
T Consensus 151 ~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~l 222 (231)
T 2p11_A 151 MLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEMD 222 (231)
T ss_dssp CHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGCG
T ss_pred HHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHHH
Confidence 1112222 345678999999999 666667788643 33322 2334443 899884 455554433
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00037 Score=64.81 Aligned_cols=105 Identities=9% Similarity=0.005 Sum_probs=64.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHH
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (672)
++.|++.++|+.|+++|+++.++|+. ....+..+.+.+|+. +......+.......
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~------ 112 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADEC------ 112 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCC------
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccc------
Confidence 57799999999999999999999997 456777788888874 111111100000000
Q ss_pred HHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE-Ecccc
Q 005879 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA 612 (672)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI-amg~~ 612 (672)
....-.|+-=..+++.+....+.++||||+.+|+.+-+.||+.. .+..+
T Consensus 113 -------~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 113 -------DCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp -------SSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred -------cccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 00011111112233445555667999999999999999999864 44433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00085 Score=66.05 Aligned_cols=84 Identities=14% Similarity=0.040 Sum_probs=60.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcH----HHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeec
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (672)
.++.|++.+.++.|++.|+++.++||++. ..+..-.+.+||.... .. .++.
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~-~~------------------------~Lil 154 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE-ES------------------------AFYL 154 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS-GG------------------------GEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc-cc------------------------ceec
Confidence 45679999999999999999999999975 4667777889986310 00 1122
Q ss_pred ccChhhHHHHHHHHhhC-CCEEEEECCCccCHHH
Q 005879 567 GVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPA 599 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~a 599 (672)
|.....|....+.+.+. -..|+++||..+|.++
T Consensus 155 r~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 KKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 22224466666666666 3578999999999986
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0024 Score=64.75 Aligned_cols=97 Identities=11% Similarity=-0.016 Sum_probs=67.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHH---HHHHHH--------hCCCCCCCCCcccccccccccCCCccHHH
Q 005879 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG---KETGRR--------LGMGTNMYPSSALLGQDKDESIAALPIDE 557 (672)
Q Consensus 489 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (672)
.++++.|++.++++.|+++|+++.++||++...+ ....+. .|+. + ...+.+...
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~----------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---L-VMQCQREQG----------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---C-SEEEECCTT-----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---c-hheeeccCC-----------
Confidence 4677899999999999999999999999985432 333444 6762 1 111111110
Q ss_pred HhhccCeecccChhhHHHHHHHHhhCCC-EEEEECCCccCHHHHhhCCeeE
Q 005879 558 LIEKADGFAGVFPEHKYEIVKRLQARKH-ICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 558 ~~~~~~v~~~~~p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~al~~A~vgI 607 (672)
..+-.|+-|..+++.+..... .++||||..+|+.|-+.||+-.
T Consensus 250 -------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 250 -------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp -------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred -------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 112336677888888865543 4689999999999999999864
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0043 Score=60.64 Aligned_cols=110 Identities=8% Similarity=0.028 Sum_probs=74.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--TFCADASQLK-----------------NSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--SEECCGGGCS-----------------SCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--cccccccccc-----------------CCCCcHH
Confidence 4678999999999999999999998754 45566778875321 1122221111 1223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEcccccHHHhhccCEEEcC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~~~~~k~~ad~v~~~ 626 (672)
-=...++.++-..+.+++|||+.+|+.+-+.||+- |+++.|. ..+|.++.+
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLPS 205 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEESS
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcCC
Confidence 44667778887788899999999999999999974 3444442 246666543
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0049 Score=62.63 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=35.4
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 532 (672)
.+++-+++.+++++|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45667899999999999999999999 57777666666777775
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.021 Score=55.87 Aligned_cols=43 Identities=19% Similarity=0.163 Sum_probs=31.5
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 532 (672)
.++.-+++.++++.+++.|++++++| |+.........+.+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555788999999999999999999 55555555555666764
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0063 Score=60.30 Aligned_cols=113 Identities=14% Similarity=0.051 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh---CCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL---GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+.... ..++.+ + +...-
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f--d~i~~~-~------------------~~~KP 188 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV--DGHFDT-K------------------IGHKV 188 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC--SEEECG-G------------------GCCTT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc--cEEEec-C------------------CCCCC
Confidence 57899999999999999999999999887777666543 343211 011111 0 01222
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE-ccc-c--c-HHHhhccCEEEc
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VAD-A--T-DAARSASDIVLT 625 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa-mg~-~--~-~~~k~~ad~v~~ 625 (672)
.|+-=..+++.++...+.++||||..+|+.+-+.||+-.. +.. + . +.....+|+++.
T Consensus 189 ~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 189 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 2333356677777777889999999999999999998543 321 1 1 122235777774
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0062 Score=60.21 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=34.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---HHHHHHHHHhCCC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMG 532 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---~~a~~ia~~~gi~ 532 (672)
++.|++.++|+.|+++|+++.++||++. ..+....+.+|+.
T Consensus 101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999984 4455556777885
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0089 Score=61.16 Aligned_cols=116 Identities=14% Similarity=0.091 Sum_probs=70.5
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh----CCCCCCCCCcccccccccccCC----Ccc-HHHHhh
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL----GMGTNMYPSSALLGQDKDESIA----ALP-IDELIE 560 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~----gi~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~ 560 (672)
...+.|+.++.++.|+++|++|+++||-+...++.+|..+ ||+.+ .+.|........ ... ..+..+
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e-----~ViG~~~~~~~~~~~~~~~~~~~~~d 215 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE-----NVIGVTTLLKNRKTGELTTARKQIAE 215 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG-----GEEEECEEEECTTTCCEECHHHHHHT
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH-----HeEeeeeeeecccccccccccccccc
Confidence 3457799999999999999999999999999999999875 44322 222221110000 000 000000
Q ss_pred cc-------C--e-----ecccChhhHHHHHHHHhhC-CCEEEEECCC-ccCHHHHhh--CCeeEEcc
Q 005879 561 KA-------D--G-----FAGVFPEHKYEIVKRLQAR-KHICGMTGDG-VNDAPALKK--ADIGIAVA 610 (672)
Q Consensus 561 ~~-------~--v-----~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg-~ND~~al~~--A~vgIamg 610 (672)
.. . . .-.+.-+.|...|+..-.. ...++++||+ ..|.+||+. ++.|+++-
T Consensus 216 g~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 216 GKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp TCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred ccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 00 0 0 0112235677777765433 3579999999 579999965 45555553
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.73 E-value=0.011 Score=56.55 Aligned_cols=88 Identities=14% Similarity=0.095 Sum_probs=54.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHH----HHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCee--c
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKET----GRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF--A 566 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~i----a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~ 566 (672)
+.+++.+.++.|+++|+++.++|+.+...+..+ .+..+... .+... ..+ .
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 367899999999999999999999975432222 22222210 00000 001 1
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
...|+-...+++.++ - ++++||..+|+.+-+.||+-..
T Consensus 145 KP~p~~~~~~~~~~g---~-~l~VGDs~~Di~aA~~aG~~~i 182 (211)
T 2b82_A 145 KPGQNTKSQWLQDKN---I-RIFYGDSDNDITAARDVGARGI 182 (211)
T ss_dssp CTTCCCSHHHHHHTT---E-EEEEESSHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHCC---C-EEEEECCHHHHHHHHHCCCeEE
Confidence 122333344444443 2 9999999999999999998643
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=0.029 Score=61.27 Aligned_cols=98 Identities=6% Similarity=-0.077 Sum_probs=64.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC------cHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCee
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGD------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
++.|++.++++.|+++|+++.++|+. .......... |+... -..++.+++.. .
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~--fd~i~~~~~~~-----------------~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMH--FDFLIESCQVG-----------------M 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTT--SSEEEEHHHHT-----------------C
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhh--eeEEEeccccC-----------------C
Confidence 46789999999999999999999986 2222222111 33211 01122221110 1
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc
Q 005879 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg 610 (672)
..-.|+-=..+++.++...+.+++|||+.||+.+.+.||+....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 223344456777778777788999999999999999999987764
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=93.76 E-value=0.049 Score=57.79 Aligned_cols=94 Identities=7% Similarity=-0.011 Sum_probs=61.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc------------HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (672)
+-|++.++|+.|+++|+++.++|+.+ ...+..+.+.+|+.- ..++...+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~f----d~i~~~~~~-------------- 149 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPF----QVLVATHAG-------------- 149 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCC----EEEEECSSS--------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCE----EEEEECCCC--------------
Confidence 67999999999999999999999965 123667788888741 111111110
Q ss_pred ccCeecccChhhHHHHHHHHh----hCCCEEEEECCCc-----------------cCHHHHhhCCeeE
Q 005879 561 KADGFAGVFPEHKYEIVKRLQ----ARKHICGMTGDGV-----------------NDAPALKKADIGI 607 (672)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~~l~----~~~~~v~~iGDg~-----------------ND~~al~~A~vgI 607 (672)
.+..-.|.-=..+++.++ ...+.++||||.. +|..+-+.||+-.
T Consensus 150 ---~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 150 ---LNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp ---TTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred ---CCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 011222322244455554 3456799999997 6888888888775
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=93.49 E-value=0.093 Score=51.49 Aligned_cols=115 Identities=10% Similarity=-0.006 Sum_probs=65.3
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHH--HHH-HHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCe-e
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKE-TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG-F 565 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~--a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~ 565 (672)
...+.+++.++++.|+ .|+++ ++|+..... ... +....++. ..++.+.....+ .
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~--------------------~~f~~~~~~~~~~~ 181 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVV--------------------TFVETATQTKPVYI 181 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHH--------------------HHHHHHHTCCCEEC
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHH--------------------HHHHHHhCCCcccc
Confidence 4456789999999997 89987 777754310 000 00000000 000111110011 1
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCee---EEcccccH-HHhh---ccCEEEcC
Q 005879 566 AGVFPEHKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIG---IAVADATD-AARS---ASDIVLTE 626 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vg---Iamg~~~~-~~k~---~ad~v~~~ 626 (672)
..-.|.-=..+.+.+....+.++||||+ .||+.|.+.||+. |..|.+.. ..++ .+|+++.+
T Consensus 182 ~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 2223334455667776667789999999 6999999999987 44454332 3333 58998843
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=93.16 E-value=0.095 Score=46.28 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=34.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc---HHHHHHHHHHhCCCC
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMGT 533 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~ 533 (672)
+.|++.++|++|+++|++++++|||+ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 35789999999999999999999998 556667777888753
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=93.10 E-value=0.0028 Score=59.59 Aligned_cols=81 Identities=16% Similarity=0.211 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.++++.|+++ |+++.++|+.+...+..+.+.+|+. +.+ ++ +
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~glf-----------------------~~i------~~---~ 120 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWV-----------------------EQH------LG---P 120 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHHH-----------------------HHH------HC---H
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCch-----------------------hhh------cC---H
Confidence 5679999999999999 9999999999876666666666541 000 11 1
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccC----HHHHh-hCCeeEE
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVND----APALK-KADIGIA 608 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND----~~al~-~A~vgIa 608 (672)
..++.+....+.++++||+.+| +.+-+ .||+-..
T Consensus 121 ----~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i 159 (193)
T 2i7d_A 121 ----QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHI 159 (193)
T ss_dssp ----HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEE
T ss_pred ----HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceE
Confidence 1344455556778999999999 76666 6766443
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=91.40 E-value=0.17 Score=49.60 Aligned_cols=93 Identities=14% Similarity=0.061 Sum_probs=62.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh--C---------CCCCCCCCcccccccccccCCCccHHHHhh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL--G---------MGTNMYPSSALLGQDKDESIAALPIDELIE 560 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (672)
++.|++.+.++. |+++.++|+.+...+..+.+.+ | +... ++.. ++....
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~-----------~~~~-----f~~~~~ 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY-----------IDGY-----FDINTS 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG-----------CCEE-----ECHHHH
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh-----------cceE-----Eeeecc
Confidence 567888888887 9999999999988777776655 3 2100 0000 000000
Q ss_pred ccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
-..-.|+-=..+++.++...+.+++|||+.+|+.+-+.||+-..
T Consensus 185 ----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i 228 (253)
T 2g80_A 185 ----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATG 228 (253)
T ss_dssp ----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 01233444466677787777889999999999999999998644
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=90.26 E-value=0.0043 Score=58.52 Aligned_cols=80 Identities=10% Similarity=0.103 Sum_probs=54.6
Q ss_pred CCCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.+.++.|++. |+++.++|+.+...+....+.+|+... . |.
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~-----------------------~------f~---- 121 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEK-----------------------Y------FG---- 121 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHH-----------------------H------HC----
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHH-----------------------h------ch----
Confidence 5679999999999999 999999999886655555555554210 0 00
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccC----HHHHh-hCCeeE
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVND----APALK-KADIGI 607 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND----~~al~-~A~vgI 607 (672)
....+.+....+.++++||..+| ..+-+ .||+-.
T Consensus 122 ---~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~ 160 (197)
T 1q92_A 122 ---PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEH 160 (197)
T ss_dssp ---GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEE
T ss_pred ---HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceE
Confidence 11223333445668899999999 76666 776643
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=87.43 E-value=0.65 Score=42.38 Aligned_cols=101 Identities=7% Similarity=-0.026 Sum_probs=58.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC---cHHH---HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCee
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGD---QLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (672)
++.|++.+.++.|++ ++++.++|+. +... ...+.+..+.... ...+ +
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~--~~~i------------------------~ 121 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP--QHFV------------------------F 121 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC--CCSHHHHHHHHHHHHCTTSCG--GGEE------------------------E
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc--ccEE------------------------E
Confidence 577999999999998 4999999997 3211 1223332333210 0111 1
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005879 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
+. ++ . .+ +.+++|||+.+|+. +.||-.|++..+.. ....+++++ ++...+...+
T Consensus 122 ~~---~~-~----~l----~~~l~ieDs~~~i~--~aaG~~i~~~~~~~-~~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 122 CG---RK-N----II----LADYLIDDNPKQLE--IFEGKSIMFTASHN-VYEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp CS---CG-G----GB----CCSEEEESCHHHHH--HCSSEEEEECCGGG-TTCCSSEEE--CSHHHHHHHH
T ss_pred eC---Cc-C----ee----cccEEecCCcchHH--HhCCCeEEeCCCcc-cCCCCceec--CCHHHHHHHH
Confidence 11 11 0 01 45789999999985 56776666643322 113567776 4466666554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.52 E-value=3 Score=40.49 Aligned_cols=51 Identities=24% Similarity=0.269 Sum_probs=35.0
Q ss_pred hCCCEEEEECCCc-cCHHHHhhCCee-EEcccc---cHHHhh---ccCEEEcCCChhHHHH
Q 005879 582 ARKHICGMTGDGV-NDAPALKKADIG-IAVADA---TDAARS---ASDIVLTEPGLSVIIS 634 (672)
Q Consensus 582 ~~~~~v~~iGDg~-ND~~al~~A~vg-Iamg~~---~~~~k~---~ad~v~~~~~~~~i~~ 634 (672)
...+.++||||+. +|+.+-+.||+. |.+..| .+...+ .+|+++. ++..+.+
T Consensus 200 ~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~--~l~el~~ 258 (263)
T 1zjj_A 200 FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLP--SVYELID 258 (263)
T ss_dssp STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEES--SGGGGGG
T ss_pred CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEEC--CHHHHHH
Confidence 4578999999995 999999999986 444322 223332 5888884 3555544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=85.35 E-value=0.79 Score=45.50 Aligned_cols=43 Identities=21% Similarity=0.187 Sum_probs=38.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
..+.+.+.++|+++++.|++++++|||+...+..+.+.+|+..
T Consensus 20 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 62 (288)
T 1nrw_A 20 HQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 62 (288)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 3477899999999999999999999999999999988888753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=83.33 E-value=1.2 Score=43.26 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=32.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi 531 (672)
.+.+.+.++|++|+++|++++++|||+... +.+.++.
T Consensus 21 ~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 21 CQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 578999999999999999999999999874 5566664
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.30 E-value=0.32 Score=45.53 Aligned_cols=92 Identities=13% Similarity=0.065 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
.+||++.+.++.|++. +++++.|.-....|..+.+.+++... + ...+.+++.. .
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~-f-~~~l~rd~~~-----------------------~ 121 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV-F-RARLFRESCV-----------------------F 121 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC-E-EEEECGGGCE-----------------------E
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc-E-EEEEEcccce-----------------------e
Confidence 4689999999999998 99999999999999999999997531 1 1112111110 0
Q ss_pred hHHHHHH---HHhhCCCEEEEECCCccCHHHHhhCCeeEEc
Q 005879 572 HKYEIVK---RLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (672)
Q Consensus 572 ~K~~iv~---~l~~~~~~v~~iGDg~ND~~al~~A~vgIam 609 (672)
.|...++ .+....+.|++|+|..++..+-+.|++-|..
T Consensus 122 ~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 122 HRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp ETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCC
T ss_pred cCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEee
Confidence 1111122 2233446799999999999987777766643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 672 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-30 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 7e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 9e-28 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 8e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-13 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-11 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-09 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 5e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 1e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 122 bits (306), Expect = 4e-30
Identities = 48/328 (14%), Positives = 100/328 (30%), Gaps = 93/328 (28%)
Query: 20 NIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVM 77
+ EE S GL+ + L +G+N+L E+ +S + + + L ++
Sbjct: 6 SKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 78 EAAAIMAIAL---ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAP 134
AA ++ L G + + I+ +L+ N+ + +E NA NA AL
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA 125
Query: 135 KGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTK 194
+ + P +L E GE L
Sbjct: 126 ATEQDKT-------------------------PLQQKLDE-----------FGEQL---- 145
Query: 195 GPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICS 254
++ +++ G V + +
Sbjct: 146 --------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK--------- 182
Query: 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314
IAV + V IP +P V++ +A+G+ R++++ AI
Sbjct: 183 IAVALAV-------------------------AAIPEGLPAVITTCLALGTRRMAKKNAI 217
Query: 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNK 342
+ + ++E + + ++
Sbjct: 218 VRSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 111 bits (277), Expect = 7e-29
Identities = 59/156 (37%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSA 540
DPPR + +I+ + G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
+ + + E +A FA V P HK +IV+ LQ+ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 113 bits (283), Expect = 9e-28
Identities = 29/346 (8%), Positives = 82/346 (23%), Gaps = 37/346 (10%)
Query: 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV-----DKNLIEVFTKGVDAD-------T 361
+ + + + + + + + DK L ++ + G++++
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 362 VVLMAAQASRTENQD--AIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNA 419
+ + + + + A + + + + L + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 420 GKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGG 479
+ + A ++ ++ + A+ + + + + K
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 480 PWQFMGLMPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 537
+ G + P + + G + + TG LG+
Sbjct: 202 TF-KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 538 SSALLGQD--------KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589
D P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 590 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 627
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.0 bits (207), Expect = 8e-20
Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 31/155 (20%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
P K E VK+LQA+ + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.4 bits (195), Expect = 2e-18
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 17/113 (15%)
Query: 136 GKVLRDGRWNEQ--DASILVPGDIISIKLGDIIPADARLLEGDP--LKIDQSALTGESLP 191
GKV R R + Q A +VPGDI+ + +GD +PAD R+L L++DQS LTGES+
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 192 VTKGPG-------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
V K + ++SG+ G+ +V TGV T GK +
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.3 bits (166), Expect = 1e-13
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 376 DAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKR--TALTYIDNAGKMHRVSKGA 429
DA ++A++ + ++ R +V + FN T+K + DN V KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 430 PEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR------ 473
PE+IL+ + +++ + G R L +P G+
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 474 -----KDSPGGPWQFMGLMPLFDPPRHD 496
+ P F+GLM + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 60.8 bits (146), Expect = 5e-11
Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 6/157 (3%)
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIA 551
R E + + +I+G + +Y + A D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
+ K ++ L M GD V D A K +D+ A
Sbjct: 135 PHSCKGT------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 56.8 bits (136), Expect = 1e-09
Identities = 25/189 (13%), Positives = 58/189 (30%), Gaps = 23/189 (12%)
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVV 363
G + + + + + E+A + LC+D + + + +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALT 86
Query: 364 LMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMH 423
+ + + + + + A R +++ L F+ K ++
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 424 R-----VSKGAPEQILNLAHNKSDIERRV------------HAVIDKFAERGLRSLAVAY 466
KGAPE +++ + RV LR LA+A
Sbjct: 147 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 467 QEVPEGRKD 475
++ P R++
Sbjct: 207 RDTPPKREE 215
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (120), Expect = 1e-07
Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 13/151 (8%)
Query: 480 PWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 539
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 540 ALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHI--CGMTGDGVNDA 597
L E + K +++K L+ + H M GDG D
Sbjct: 130 RLKFY---------FNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 598 PALKKADIGIAVA--DATDAARSASDIVLTE 626
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 49.7 bits (118), Expect = 1e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 629 LSVIISAV 636
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.0 bits (108), Expect = 4e-06
Identities = 11/58 (18%), Positives = 18/58 (31%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K + V ++ + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 46.0 bits (107), Expect = 5e-06
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 625 TEPGLSVIISAV 636
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.7 bits (107), Expect = 6e-06
Identities = 33/193 (17%), Positives = 57/193 (29%), Gaps = 55/193 (28%)
Query: 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL 558
E+IR A G+ V +++G+ + + LG+ ++ + + D D SI +E
Sbjct: 27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEG 86
Query: 559 IEK---------------------ADGFAGVFPEHKYEIVKRLQARKHI----------- 586
K A + PE + K ++R +
Sbjct: 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLM 146
Query: 587 -----------------------CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ GD ND P + A+ATD ++ SD V
Sbjct: 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 206
Query: 624 LTEPGLSVIISAV 636
I
Sbjct: 207 SDYSYGEEIGQIF 219
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 544 QDKDESIAALPIDELIEKADGFAGVFPE--HKYEIVKRLQARKHI----CGMTGDGVNDA 597
+++ E + ++P E+ FA V + K + + + I GDG ND
Sbjct: 156 EEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDI 215
Query: 598 PALKKADIGIAVADATDAARSASDIV 623
L+ A IG+A+ A + ++A+D V
Sbjct: 216 SMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 643
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIV 623
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ GD ND ++A + +A+ +A + + ASDIV
Sbjct: 209 IVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 672 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.95 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.9 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.75 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.49 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.47 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.47 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.43 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.38 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.37 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.34 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.31 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.3 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.25 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.12 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.12 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.11 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.1 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.08 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.03 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.87 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.44 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.34 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.99 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.97 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.89 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.88 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.84 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.74 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.6 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.54 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.5 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.39 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.25 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.24 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.11 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.1 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.08 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.98 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.71 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.66 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.43 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.38 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.36 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.35 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.34 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 96.32 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.18 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.17 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.16 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.67 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 95.29 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.2 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.92 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 94.64 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 90.45 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=3e-31 Score=244.79 Aligned_cols=148 Identities=41% Similarity=0.572 Sum_probs=133.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
||+|++++++|+.|+++||+++|+|||+..+|..+|+++||..+.. ....+.+.+++ .....+..+..++..+|+|+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHH-HSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccc-hhhHHHHhhhhhhhhhhhcc
Confidence 9999999999999999999999999999999999999999975432 22334444443 34555677788889999999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
+|+||..+++.||+.|++|+|+|||.||++||++|||||||+++++.++++||++++++++..+.++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.95 E-value=2.9e-28 Score=215.44 Aligned_cols=124 Identities=35% Similarity=0.504 Sum_probs=109.0
Q ss_pred EEEEeeccCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhcc
Q 005879 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (672)
Q Consensus 483 ~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (672)
..+.++++|++||+++++|+.|+++|++++|+|||+..++..+|+++||+
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~------------------------------ 61 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------ 61 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh------------------------------
Confidence 44568899999999999999999999999999999999999999999995
Q ss_pred CeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 563 DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 563 ~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.+|++++|++|..+++.+|.. +.|+|+|||.||+|||++||+||||+++++.++++||++++++++..++++|+
T Consensus 62 ~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 379999999999999999874 68999999999999999999999999999999999999999999999998874
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=1e-28 Score=268.04 Aligned_cols=243 Identities=20% Similarity=0.221 Sum_probs=187.4
Q ss_pred cccCCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC---
Q 005879 17 DLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGG--- 91 (672)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--- 91 (672)
+||..+.||++++|++| ++|||++|+++|+++||+|+++.++ .++|..|+++|++|+.++++++++++++++...
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 79999999999999999 6899999999999999999998866 566778999999999999999999999987532
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCeEEEEeCCCCCCCcEEEEcCCCeecccEE
Q 005879 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (672)
Q Consensus 92 ~~~~~~~~~~~ii~~v~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~l~~G~~iPaD~~ 171 (672)
.....|.+++.|++++++++.++++||++++++++++.+..++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 22347889999999999999999999999999999987765543 35778888865
Q ss_pred EEecCCeEEeccCcCCCCcccccCCCCcceeceeeeeCceEEEEEEecccccchhhhhhhcccCCCChHHHHHHHHHHHH
Q 005879 172 LLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFC 251 (672)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~~~~ 251 (672)
+.+ +||+.+ .+.+.|..+|..|..|++...+....
T Consensus 138 l~~-----------~g~~i~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 172 (472)
T d1wpga4 138 LDE-----------FGEQLS------------------KVISLICVAVWLINIGHFNDPVHGGS---------------- 172 (472)
T ss_dssp HHH-----------HHHHHH------------------HHHHHHHHHHHHHCCTTSSSCCSSSC----------------
T ss_pred HHH-----------HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHhhhh----------------
Confidence 422 122110 01111222233333333222211110
Q ss_pred HHHHHHHHHHHHHHHhhccCccccchhhHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCcccchhhhhhhcCccEEE
Q 005879 252 ICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331 (672)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~ 331 (672)
....+.+.+...++++++++|++||++++++++++++||+|+|++||+..++|++|+..+.|
T Consensus 173 ------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 173 ------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp ------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred ------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 01223344556677888999999999999999999999999999999999999999999999
Q ss_pred eecc--ccccCCcccccc
Q 005879 332 SDKT--GTLTLNKLTVDK 347 (672)
Q Consensus 332 ~DKT--GTLT~~~~~v~~ 347 (672)
+||| +|||.|-+.+..
T Consensus 235 ~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 235 MKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHhhhhhhhhhHHHHHH
Confidence 9998 999999887653
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=1e-25 Score=191.98 Aligned_cols=96 Identities=41% Similarity=0.605 Sum_probs=87.4
Q ss_pred ceEEEECCeE--EEEeCCCCCCCcEEEEcCCCeecccEEEEec--CCeEEeccCcCCCCcccccCC-------------C
Q 005879 135 KGKVLRDGRW--NEQDASILVPGDIISIKLGDIIPADARLLEG--DPLKIDQSALTGESLPVTKGP-------------G 197 (672)
Q Consensus 135 ~~~V~r~g~~--~~i~~~~L~~GDiI~l~~G~~iPaD~~ll~g--~~l~Vdes~LTGEs~pv~k~~-------------~ 197 (672)
.++|+|+|++ ++|++++|+|||+|.|++|++|||||+|+++ .++.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 4789999985 7899999999999999999999999999864 347899999999999999975 3
Q ss_pred CcceeceeeeeCceEEEEEEecccccchhhhhh
Q 005879 198 DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHL 230 (672)
Q Consensus 198 ~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~ 230 (672)
+.+|+||.+.+|.++++|++||.+|.+|++.++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~ 114 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHh
Confidence 569999999999999999999999999998765
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.90 E-value=2.2e-27 Score=250.27 Aligned_cols=311 Identities=10% Similarity=-0.034 Sum_probs=201.8
Q ss_pred hhhhhhcCccEEEeeccccccCCccccccceEE-----ecccCCChH-HHHHHHHH---cc-cccccchHHHHHHhhcCC
Q 005879 319 TAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE-----VFTKGVDAD-TVVLMAAQ---AS-RTENQDAIDAAIVGMLAD 388 (672)
Q Consensus 319 ~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~-----~~~~~~~~~-~~~~~~~~---~~-~~~~~~~~~~ai~~~~~~ 388 (672)
.+.|.||..+++|+|||||+|.+.|++..+.-+ ....+.+.+ .+....+. +. .....++...++......
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDEP 110 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSSC
T ss_pred hchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHhh
Confidence 445899999999999999999999987532100 000122222 11111111 10 111223444444443322
Q ss_pred hHH----HhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEE
Q 005879 389 PKE----ARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAV 464 (672)
Q Consensus 389 ~~~----~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~ 464 (672)
... .+..+.....+||++.+++|+......++.+..+.+|+++.+. ........+...+..++.+|+|++++
T Consensus 111 ~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l~~ 186 (380)
T d1qyia_ 111 VELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEWYL 186 (380)
T ss_dssp HHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 211 2345566677899999999876543323333334456655432 12223345566778899999999999
Q ss_pred EeeecCCCCCCCCCCCeEEEEEeeccCCCCc--chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc
Q 005879 465 AYQEVPEGRKDSPGGPWQFMGLMPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542 (672)
Q Consensus 465 a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r~--~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~ 542 (672)
|++..+..+.+ ........|++..+++++| +++++|+.|+++|++++|+|||+..+|..+++++|+........++.
T Consensus 187 ~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~ 265 (380)
T d1qyia_ 187 GSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIAT 265 (380)
T ss_dssp HHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEEC
T ss_pred hhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEe
Confidence 98765322211 1122235688899999665 99999999999999999999999999999999999965433333333
Q ss_pred ccccc--------ccCCCccHHHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCC---eeEEcc-
Q 005879 543 GQDKD--------ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVA- 610 (672)
Q Consensus 543 ~~~~~--------~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~---vgIamg- 610 (672)
+++.. ......+-...+.....+++.+|.+|..+++.++..++.|+|+|||.||++|+|.|| |||+||
T Consensus 266 ~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~ 345 (380)
T d1qyia_ 266 ASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345 (380)
T ss_dssp HHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBT
T ss_pred cchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCC
Confidence 32210 000011111222333457899999999999999999999999999999999999999 999999
Q ss_pred cccHHHhh----ccCEEEcCCChhHHHHHH
Q 005879 611 DATDAARS----ASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 611 ~~~~~~k~----~ad~v~~~~~~~~i~~~i 636 (672)
.+++..++ .||+++ +++..+.+++
T Consensus 346 ~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 346 KGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 56654443 799999 5577776654
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.75 E-value=8.4e-18 Score=161.57 Aligned_cols=123 Identities=24% Similarity=0.353 Sum_probs=98.1
Q ss_pred ccchHHHHHHhhc----CChHHHhcccceEEEecCCCCCceEEEEEEeC--CCeEEEEEcCcHHHHHHhccC--------
Q 005879 374 NQDAIDAAIVGML----ADPKEARAGIQEVHFLPFNPTDKRTALTYIDN--AGKMHRVSKGAPEQILNLAHN-------- 439 (672)
Q Consensus 374 ~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~--~~~~~~~~KGa~e~i~~~~~~-------- 439 (672)
.++|.+.|++.++ .+....+..++.+..+||+|.+|+|++++... ++++++|+|||||.|+++|+.
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCcee
Confidence 3589999998764 34456677899999999999999999998753 467889999999999999973
Q ss_pred --ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC-----------CCCCCCCeEEEEEeeccCCCCcc
Q 005879 440 --KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR-----------KDSPGGPWQFMGLMPLFDPPRHD 496 (672)
Q Consensus 440 --~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~-----------~~~~e~~l~~lG~i~~~d~~r~~ 496 (672)
+.+.++.+.+.+++|+.+|+|||++|||.++..+ .+..+.+|+|+|++++.||||+.
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred echHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 4567888999999999999999999999987654 23457899999999999999974
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.49 E-value=3.4e-14 Score=137.42 Aligned_cols=148 Identities=20% Similarity=0.214 Sum_probs=103.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC--cc-ccc-c-----c-----------------
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SA-LLG-Q-----D----------------- 545 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--~~-~~~-~-----~----------------- 545 (672)
.+.+.+.++|++|+++|++++++|||+...+..++..+++....... .. ... . .
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 47789999999999999999999999999999999999886432100 00 000 0 0
Q ss_pred ------ccc----------cCCCccHHHHhhccC-----------eecccChhhHHHHHHHH----hhCCCEEEEECCCc
Q 005879 546 ------KDE----------SIAALPIDELIEKAD-----------GFAGVFPEHKYEIVKRL----QARKHICGMTGDGV 594 (672)
Q Consensus 546 ------~~~----------~~~~~~~~~~~~~~~-----------v~~~~~p~~K~~iv~~l----~~~~~~v~~iGDg~ 594 (672)
... ......+.++..... +-.......|...++.+ +...+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000 000011222222111 11112234566666554 33456799999999
Q ss_pred cCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005879 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 595 ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
||++||+.||+||||+|+++.+|+.||+|+..++.+++.+++++.
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999988754
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.47 E-value=1.5e-14 Score=140.97 Aligned_cols=97 Identities=21% Similarity=0.347 Sum_probs=79.9
Q ss_pred hcccceEEEecCCCCCceEEEEEEeCCC-----eEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHH--H
Q 005879 393 RAGIQEVHFLPFNPTDKRTALTYIDNAG-----KMHRVSKGAPEQILNLAHN----------KSDIERRVHAVIDKF--A 455 (672)
Q Consensus 393 ~~~~~~~~~~~f~~~~~~~~v~~~~~~~-----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~ 455 (672)
+..++.+..+||+|.||||++++..+++ .+.+|+|||||.|+++|+. +.+.++.+.+.++.+ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4568899999999999999999986544 3678999999999999973 345677788888876 6
Q ss_pred HcCCeEEEEEeeecCCCCC----------CCCCCCeEEEEEeec
Q 005879 456 ERGLRSLAVAYQEVPEGRK----------DSPGGPWQFMGLMPL 489 (672)
Q Consensus 456 ~~G~r~l~~a~~~l~~~~~----------~~~e~~l~~lG~i~~ 489 (672)
++|+|||++|||+++..+. +..|++|+|+|++++
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999976532 234789999999986
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.47 E-value=1.2e-13 Score=133.63 Aligned_cols=149 Identities=19% Similarity=0.156 Sum_probs=103.9
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC--cccccc--ccccc----------------
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SALLGQ--DKDES---------------- 549 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--~~~~~~--~~~~~---------------- 549 (672)
+.++.+++.++++.|++.|++++++|||+...+..+...+|+....... ..+... .....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3457789999999999999999999999999999999999986532200 000000 00000
Q ss_pred -------------------CCCccHHHHh---hcc--Ce-----ecccCh--hhHHHHHHHHhh----CCCEEEEECCCc
Q 005879 550 -------------------IAALPIDELI---EKA--DG-----FAGVFP--EHKYEIVKRLQA----RKHICGMTGDGV 594 (672)
Q Consensus 550 -------------------~~~~~~~~~~---~~~--~v-----~~~~~p--~~K~~iv~~l~~----~~~~v~~iGDg~ 594 (672)
......+.+. ... .+ .....| ..|...++.+.+ ..+.|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 0001111111 000 01 111222 467777665543 346699999999
Q ss_pred cCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 595 ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
||.+|++.||+||||+|+.+.+|+.||+|+..++.++|.+++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999998874
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=1.6e-13 Score=136.40 Aligned_cols=66 Identities=23% Similarity=0.198 Sum_probs=59.5
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
+|...++.+.+. ...++++|||.||.+||+.|++|+||+|+.+.+|+.||+|+.+++.+|+.++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 588777776553 456999999999999999999999999999999999999999999999999886
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.38 E-value=1.7e-13 Score=137.24 Aligned_cols=67 Identities=24% Similarity=0.285 Sum_probs=59.7
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.+.+ ..+.|+++|||.||.+||+.||.||||+||++.+|+.||+++.+++.+||.++|+.
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 68777776654 34579999999999999999999999999999999999999999999999999863
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.37 E-value=8.2e-14 Score=138.48 Aligned_cols=66 Identities=21% Similarity=0.239 Sum_probs=59.3
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.|...++.|.+ ..+.|+++|||.||.+||+.||.||||+||++.+|+.||+|+.+++.+|++++|+
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 58877766654 3457999999999999999999999999999999999999999999999999887
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.34 E-value=1.2e-12 Score=120.50 Aligned_cols=107 Identities=23% Similarity=0.249 Sum_probs=87.4
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhhHHH---
Q 005879 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYE--- 575 (672)
Q Consensus 499 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~--- 575 (672)
.+|+.|++.|+.+.++||+....+...++++++.. ++.. ..+|..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~--~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------cccc--cccHHHHHH
Confidence 47999999999999999999999999999999852 1222 223433
Q ss_pred -HHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhH-HHHHHH
Q 005879 576 -IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAVL 637 (672)
Q Consensus 576 -iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~-i~~~i~ 637 (672)
+.+.++...+.|+++||+.||.+||+.|++|+||+||++.+|++||+|+..+.-+| +.++++
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e 150 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSD 150 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHH
Confidence 44445555688999999999999999999999999999999999999999887666 555544
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.31 E-value=7.8e-13 Score=130.68 Aligned_cols=67 Identities=25% Similarity=0.289 Sum_probs=59.8
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
.|...++.|.+ ..+.++++|||.||.+||+.||.||||+||++.+|+.||+|+.+++.+|+.++|++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 58777666644 45679999999999999999999999999999999999999999999999999974
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.30 E-value=2.9e-12 Score=127.06 Aligned_cols=66 Identities=24% Similarity=0.254 Sum_probs=58.8
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.|...++.+.+ ....|+++|||.||.+||+.||+||||+||++.+|+.||+|+.+++.+|++++|+
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 58777766543 3557999999999999999999999999999999999999999999999999886
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.25 E-value=1.4e-12 Score=130.09 Aligned_cols=66 Identities=27% Similarity=0.304 Sum_probs=53.7
Q ss_pred hHHHHHHHH----hhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCC-ChhHHHHHHH
Q 005879 572 HKYEIVKRL----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP-GLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l----~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~-~~~~i~~~i~ 637 (672)
.|...++.+ +...+.|+++|||.||.+||+.||+|+||+||++.+|+.||+|+.++ +..++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 455555544 33456899999999999999999999999999999999999999755 4555777765
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.12 E-value=3.4e-11 Score=113.78 Aligned_cols=136 Identities=23% Similarity=0.211 Sum_probs=96.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++.+++.+.++.++..|..+.++||.....+....++.++...... .+.......... .......+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGKLTGD-------VEGEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEEEEE-------EECSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccccccccc-------cccccccccccc
Confidence 46778999999999999999999999999999998888887532110 000000000000 000000111112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
.....+.+.++...+.++++|||.||++|++.||+|||| |+.+.+++.||+|+.++|+++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 333455556666677899999999999999999999999 89999999999999999999988765
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=4.6e-11 Score=114.27 Aligned_cols=122 Identities=18% Similarity=0.167 Sum_probs=89.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc----ccccccccccCCCccHHHHhhccCeecc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----ALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
+++|++.+.|+.|+++|++++++||.....+..+++.+|++...+... ...|..... ......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~-------------~~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF-------------DETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE-------------CTTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc-------------eeeeee
Confidence 367999999999999999999999999999999999999964211000 000100000 000111
Q ss_pred cChhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhCCeeEEcc-c-ccHHHhhccCEEEcC
Q 005879 568 VFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARSASDIVLTE 626 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgIamg-~-~~~~~k~~ad~v~~~ 626 (672)
..+..|..+++.++.. .+.++++|||.||++|++.||++||++ + ..+..++.||+++.+
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 3457799999988753 457999999999999999999999997 3 456777889999843
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.11 E-value=2.3e-11 Score=118.12 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=40.0
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 533 (672)
.+...+.++++|++|+++|++++++|||+...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45566889999999999999999999999999999999999864
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.10 E-value=3.9e-11 Score=115.36 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=107.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc-cccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-GQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+........... +....... ............|
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~-------~~~~~~~~~~~k~ 147 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW-------PHSCKGTCSNQCG 147 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEEC-------TTCCCTTCCSCCS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceecc-------ccccccccccCCH
Confidence 467999999999999999999999999999999999888754321111111 10000000 0000123456788
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHHHHHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~ 647 (672)
..|..+++.++..++.|+|+||+.||++|++.||+++|++...+.+++..--...-++++.+...++.-....+.++
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999987666665543223334679999888877666665543
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.08 E-value=1.2e-10 Score=109.53 Aligned_cols=131 Identities=16% Similarity=0.165 Sum_probs=91.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
+..+.....++.+ +.+.+.+++|+.............++............... ........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC---------------EEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc---------------cccccccchh
Confidence 3455666666665 57899999999999999999988887532110000000000 0112334456
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 639 (672)
.+...++.++...+.|+|||||.||++||+.||+||||++..+..++++|+++. ++++.+.++|...
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHHH
Confidence 667888899999999999999999999999999999995555556677788775 5677788776543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.03 E-value=7.3e-11 Score=114.93 Aligned_cols=69 Identities=19% Similarity=0.156 Sum_probs=59.4
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccC-------EEEcCCChhHHHHHHHH
Q 005879 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVLT 638 (672)
Q Consensus 570 p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad-------~v~~~~~~~~i~~~i~~ 638 (672)
..+|...++.+.+. .+.|+++|||.||.+||+.||.|++|+|+.+.+|+.|| ++...++.+|+.++|+.
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 35688888777654 35699999999999999999999999999999999888 78888889999998864
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=2.4e-09 Score=102.41 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=38.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 532 (672)
.+.+.++++|++|+++|+.++++|||+...+..+.+++++.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 47789999999999999999999999999999999999985
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.44 E-value=7e-08 Score=91.66 Aligned_cols=62 Identities=10% Similarity=0.185 Sum_probs=46.8
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
.+|...++.|... ..++++||+.||.+||+.|+.|+||++|.. +.+|++.+.+ .+.+.+.++
T Consensus 158 ~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~~--~~~A~~~~~~--~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGEG--ETHAKFHVAD--YIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESSS--CCCCSEEESS--HHHHHHHHH
T ss_pred CCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCCC--CccCeEEcCC--HHHHHHHHH
Confidence 4699999999876 468899999999999999977777765432 4688999854 444555444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.34 E-value=6.8e-08 Score=92.41 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=46.3
Q ss_pred hhHHHHHHHHhh-CCCEEEEECCC----ccCHHHHhhCC-eeEEcccccHHHhhccCEEE
Q 005879 571 EHKYEIVKRLQA-RKHICGMTGDG----VNDAPALKKAD-IGIAVADATDAARSASDIVL 624 (672)
Q Consensus 571 ~~K~~iv~~l~~-~~~~v~~iGDg----~ND~~al~~A~-vgIamg~~~~~~k~~ad~v~ 624 (672)
..|...++.|.+ ..+.|+++||+ .||.+||+.|+ .|+||+|+.+.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 357888888765 46789999995 69999999998 69999999999999998865
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.99 E-value=6.1e-06 Score=78.02 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=81.9
Q ss_pred CCcchHHHHHHHHhCC-CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 493 PRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
+-|++.+.++.|++.| +++.++|+.....+....+.+|+.... ...+.+++.. ...-.|.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~-----------------~~k~~p~ 152 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF--PFGAFADDAL-----------------DRNELPH 152 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC--SCEECTTTCS-----------------SGGGHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc--cccccccccc-----------------cccchhH
Confidence 3579999999999987 899999999999999999999986431 1111111100 0011122
Q ss_pred hHHHHHHHHh---hCCCEEEEECCCccCHHHHhhCCe---eEEccccc-HH-HhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADI---GIAVADAT-DA-ARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~v---gIamg~~~-~~-~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
--...++.+. ...+.++||||+.+|+.|-+.||+ +|+-|..+ +. .+..||+++ ++++.+.+.|.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 1122333342 234679999999999999999994 44556433 32 444689998 55777777664
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.97 E-value=1.2e-05 Score=77.50 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|++.|+++.++||.+...+..+.+.+|+.... ....+.+++.. .....|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~-----------------~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP-----------------AGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-ccccccccccc-----------------ccccChH
Confidence 46799999999999999999999999999999999998886422 12223322211 2233455
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCccCHHHHhhCCee
Q 005879 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (672)
Q Consensus 572 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vg 606 (672)
.=...++.+... .+.++||||+.+|+.+-+.||+-
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ 196 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW 196 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCE
Confidence 556777777764 57899999999999999999973
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.89 E-value=5e-06 Score=78.12 Aligned_cols=124 Identities=17% Similarity=0.139 Sum_probs=87.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
.+.|++++.++.|++.|+++.++|+.....+..+.+.+|+.... ...+...+.. .....|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc--cccccccccc-----------------cccccch
Confidence 35799999999999999999999999999999999999986321 1111111110 1222345
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcc---cc-cHHHhhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVA---DA-TDAARSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg---~~-~~~~k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+.+.++...+.++||||+.+|+.+-+.||+ .|.+. +. .+.....+|+++ +++..+.++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 5566777788788899999999999999999997 44443 21 233445689988 4566665543
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.88 E-value=1.2e-05 Score=69.44 Aligned_cols=121 Identities=21% Similarity=0.312 Sum_probs=84.0
Q ss_pred cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHH---hcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHH
Q 005879 355 KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA---RAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPE 431 (672)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~---~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e 431 (672)
.+.+.++++.+++.++.. +.||+++||+.++...... ..........||....+...+. .+|+. +..|++.
T Consensus 11 ~G~~~~ell~~AA~aE~~-SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g~~--v~~G~~~ 84 (136)
T d2a29a1 11 QGVDEKTLADAAQLASLA-DETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDNRM--IRKGSVD 84 (136)
T ss_dssp TTCCHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETTEE--EEEECHH
T ss_pred CCCCHHHHHHHHHHHhCC-CCchHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECCEE--EEecHHH
Confidence 588999999999988754 4469999999876422110 1123334455666555443332 24554 4569998
Q ss_pred HHHHhccC-ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeeccCCCC
Q 005879 432 QILNLAHN-KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494 (672)
Q Consensus 432 ~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~~d~~r 494 (672)
.+..+... ....+..+.+.++.+..+|.+++.+|... +++|++++.|+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 77654321 12345677888999999999999999876 9999999999986
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.84 E-value=1.5e-05 Score=74.64 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F--~~i~~~~~~~-----------------~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc--cccccccccc-----------------cchhhHH
Confidence 34689999999999999999999999999999999999995321 1222222111 2233344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE-ccc--c-cHHHhhccCEEEcC
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VAD--A-TDAARSASDIVLTE 626 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa-mg~--~-~~~~k~~ad~v~~~ 626 (672)
-=..+++.++-..+.+++|||+.+|+.|-+.||+... +.. . .+.....||+++.+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence 4567788888888899999999999999999997543 222 2 22233568888743
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.74 E-value=2.2e-05 Score=76.54 Aligned_cols=134 Identities=10% Similarity=0.018 Sum_probs=79.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++|+++++.++.|++.|+++.++||--......+++++|+..+.. .+.....+- +...+..-+. .--....
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni---~I~sN~l~f--~~~~~~~~~~----~~~i~~~ 205 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMDF--DENGVLKGFK----GELIHVF 205 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE---EEEEECEEE--CTTSBEEEEC----SSCCCTT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc---eEEeeEEEE--eCCeeEeecc----CCccccc
Confidence 589999999999999999999999999999999999999864321 011100000 0000000000 0001122
Q ss_pred hHHHHH----HH--HhhCCCEEEEECCCccCHHHHhh---CCeeEEcc--ccc-----HHHhhccCEEEcCCChhHHHH
Q 005879 572 HKYEIV----KR--LQARKHICGMTGDGVNDAPALKK---ADIGIAVA--DAT-----DAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 572 ~K~~iv----~~--l~~~~~~v~~iGDg~ND~~al~~---A~vgIamg--~~~-----~~~k~~ad~v~~~~~~~~i~~ 634 (672)
.|...+ .. .......|+++|||.||+.|.+. ++..++.| +.. +.-.++-|+|+.++.--.++.
T Consensus 206 ~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~ 284 (291)
T d2bdua1 206 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVN 284 (291)
T ss_dssp CHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHH
T ss_pred cCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHH
Confidence 232221 22 22245689999999999999874 34555554 322 222367799988665444433
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.60 E-value=2e-05 Score=73.13 Aligned_cols=121 Identities=8% Similarity=0.020 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.+++.+.++.++..+ ++.++|+.+...+..+.+.+|+.... ..++.+.+ .....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~~-------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSSP-------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECS-------------------SCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--cccccccc-------------------ccccccc
Confidence 45689999999999775 88999999999999999999986421 11111111 1233355
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEc--c-cccHHH-hhccCEEEcCCChhHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV--A-DATDAA-RSASDIVLTEPGLSVIISAV 636 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIam--g-~~~~~~-k~~ad~v~~~~~~~~i~~~i 636 (672)
--..+++.++-..+.++||||+.||+.|-+.||+ .|++ | ...+.. ...+|+++. ++..+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~l 209 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAYF 209 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHHT
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHHh
Confidence 5566677777777889999999999999999997 4444 4 223333 344899984 466665543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.54 E-value=0.00015 Score=68.14 Aligned_cols=124 Identities=17% Similarity=0.148 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|+ +|+++.++|+..........+.+|+.... ..++...+. -...-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-----------------~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF--DSITTSEEA-----------------GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEHHHH-----------------TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc--ccccccccc-----------------cccchhhH
Confidence 45789999999996 58999999999888888999999985321 111111100 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCC-ccCHHHHhhCCeeEEc---ccccHHHhhccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgIam---g~~~~~~k~~ad~v~~~~~~~~i~~~i~ 637 (672)
-=..+++.++.....+++|||. .+|+.+-+.||+.... +.........+|+++ .+++.+.+.|+
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 3356667777677789999998 6899999999986432 233444556789988 44888887776
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=0.00019 Score=64.94 Aligned_cols=134 Identities=16% Similarity=0.144 Sum_probs=81.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCcccccccccccCCCccHHH
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDE 557 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (672)
+-|++.++++.|+++|++++++|..+.. .........|+... ...+.....+. ...
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~~-----~~~- 98 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQG-----SVE- 98 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTTC-----SSG-
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeeccccccc-----ccc-
Confidence 4589999999999999999999987631 11112222233210 00000000000 000
Q ss_pred HhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee--EEc--ccc-cHHHhhccCEEEcCCChhHH
Q 005879 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSVI 632 (672)
Q Consensus 558 ~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg--Iam--g~~-~~~~k~~ad~v~~~~~~~~i 632 (672)
.......+..-.|.-=..+++.++...+.++||||..+|+.|-+.|+++ +.+ |.+ .+.....||+|+ +++..+
T Consensus 99 ~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 99 EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred cccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 0000111233445555777788887778899999999999999999985 334 322 345556799998 568888
Q ss_pred HHHHH
Q 005879 633 ISAVL 637 (672)
Q Consensus 633 ~~~i~ 637 (672)
.++|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=3.3e-05 Score=72.96 Aligned_cols=49 Identities=18% Similarity=0.302 Sum_probs=34.7
Q ss_pred hHHHHHHHHhh-CCCEEEEECC----CccCHHHHhhCC-eeEEcccccHHHhhccC
Q 005879 572 HKYEIVKRLQA-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASD 621 (672)
Q Consensus 572 ~K~~iv~~l~~-~~~~v~~iGD----g~ND~~al~~A~-vgIamg~~~~~~k~~ad 621 (672)
+|...++.|.. ..+.|++||| |.||.+||+.|+ .|++++|. +..++.++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~-~~~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH-HHHHHHHH
Confidence 46666665543 4678999999 789999999998 67877774 55555554
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.25 E-value=4.5e-05 Score=70.63 Aligned_cols=119 Identities=10% Similarity=0.064 Sum_probs=82.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChhh
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (672)
+.|++.+.++.|+ +++++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+-
T Consensus 83 ~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSHH
T ss_pred cccchhhhhhhhc-ccccccccccccccccccccccccccccc--ccccccccc-----------------ccchhhhhh
Confidence 5589999999997 47999999999999999999888875321 111111110 012233455
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc---ccccHHHhhccCEEEcCCChhHHH
Q 005879 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 633 (672)
Q Consensus 573 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam---g~~~~~~k~~ad~v~~~~~~~~i~ 633 (672)
-..+++.++...+.++||||+.+|+.+-+.||+.... |..+....+.+|+++. ++..+.
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEES--SGGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeC--CHHHHH
Confidence 5677777776667899999999999999999998664 4334444557888873 455443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.24 E-value=9.2e-05 Score=68.20 Aligned_cols=118 Identities=15% Similarity=0.078 Sum_probs=79.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+.... ..++..++. ....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~~s~~~-----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEILTSQSG-----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--ccccccccc-----------------cccchhHH
Confidence 3569999999999999999999998765 456678889986321 111111110 12223455
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE-EcccccHHHhhccCEEEcCCChhHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATDAARSASDIVLTEPGLSVIISA 635 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI-amg~~~~~~k~~ad~v~~~~~~~~i~~~ 635 (672)
--..+++.++-..+.++||||+.+|+.+-+.||+.. ++..+.. .+|..+ +++..+.+.
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHH
Confidence 556777888877889999999999999999999854 3444432 345544 234444443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.0005 Score=64.68 Aligned_cols=116 Identities=16% Similarity=0.049 Sum_probs=80.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
.+.|++.+.+++|+++|+++.++|+............+|+..-. +......+. ....+-.|+
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~-----------------~~~~KP~p~ 188 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-----------------KIGHKVESE 188 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-----------------GGCCTTCHH
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeecc-----------------ccccCCCcH
Confidence 46799999999999999999999999998888888888874311 100000000 011233344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEc----ccc-cHHHhhccCEEEc
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADA-TDAARSASDIVLT 625 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIam----g~~-~~~~k~~ad~v~~ 625 (672)
-=...++.++-..+.++||||..+|+.+-++||+-... |+. .......++.++.
T Consensus 189 ~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 189 SYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 44667777877788999999999999999999996655 332 2233345677763
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.10 E-value=0.00025 Score=62.89 Aligned_cols=92 Identities=11% Similarity=0.067 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH-HHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
++.|++.++++.|+++|+++.++|+.+. ..+....+..++..... .. .....-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--~~----------------------~~~~kp~~ 101 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--QR----------------------EIYPGSKV 101 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--EE----------------------EESSSCHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--ee----------------------ecccCCCh
Confidence 4789999999999999999999997654 45666667766642100 00 00111224
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeE
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgI 607 (672)
+.-..+++.++...+.++||||..+|+.+-+.||+-.
T Consensus 102 ~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 102 THFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 4446677777777889999999999999999998844
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.08 E-value=0.00087 Score=63.28 Aligned_cols=125 Identities=11% Similarity=0.124 Sum_probs=85.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++.++++.|++ |+++.++|+.+........+.+|+.... ..++.+.+.. ...-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~~-----------------~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc--cccccccccc-----------------cchhhhh
Confidence 356999999999984 8999999999988888989999985321 1122211111 1223333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCee-EEcc--cc--cHHHhhccCEEEcCCChhHHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARSASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg-Iamg--~~--~~~~k~~ad~v~~~~~~~~i~~~i~~ 638 (672)
-=..+++.++...+.++||||.. +|+.+-+.||+. +..- .+ .......+|+++ +++..+.++|+.
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHHH
Confidence 33566777777777899999995 899999999996 4332 22 222334578888 457778777763
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.98 E-value=0.00073 Score=61.03 Aligned_cols=109 Identities=13% Similarity=0.043 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++.|++++.++.|++.|+++.++|+.+.... ...+.+++.... ..++.+++.. .....|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc--cccccccccc-----------------ccCCCHH
Confidence 4568999999999999999999999776554 567788875321 1122111110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcccccHHHhhccCE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg~~~~~~k~~ad~ 622 (672)
--..+.+.++- +.+++|||..+|+.+-+.||+-...-++....++..|+
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 34455565553 45899999999999999999886554566666666653
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.71 E-value=0.0004 Score=66.28 Aligned_cols=53 Identities=17% Similarity=0.201 Sum_probs=38.3
Q ss_pred HHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCe-eEEcccc---c---HHHhhccCEEEcC
Q 005879 574 YEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVADA---T---DAARSASDIVLTE 626 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~v-gIamg~~---~---~~~k~~ad~v~~~ 626 (672)
..+++.++...+.++||||+. +|+.|.+.||+ +|.+.+| . ..++..+|+++.+
T Consensus 187 ~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 187 ERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp HHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred HHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECC
Confidence 566777777788999999996 59999999999 6655322 1 2233346999854
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.66 E-value=0.00024 Score=61.77 Aligned_cols=96 Identities=13% Similarity=0.021 Sum_probs=59.9
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHH----HHHHH------H-hCCCCCCCCCcccccccccccCCCccHHHH
Q 005879 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIG----KETGR------R-LGMGTNMYPSSALLGQDKDESIAALPIDEL 558 (672)
Q Consensus 490 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a----~~ia~------~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (672)
++++.|++.+.++.|+++|++++++||++.... ..+.. . .+.. ........
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~-----~~~~~~~~------------- 95 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-----LVMQCQRE------------- 95 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-----CSEEEECC-------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCc-----EEEeeccc-------------
Confidence 578899999999999999999999999974211 11111 0 0110 00000000
Q ss_pred hhccCeecccChhhHHHHHHHHhhCC-CEEEEECCCccCHHHHhhCCeeE
Q 005879 559 IEKADGFAGVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIGI 607 (672)
Q Consensus 559 ~~~~~v~~~~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~vgI 607 (672)
.--.|-.+.-|..+.+.+...+ +.++++||...|+.|.+.+|+-.
T Consensus 96 ----~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 96 ----QGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp ----TTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ----ccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcE
Confidence 0001122345677777665554 45688999999999999998863
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.43 E-value=0.0019 Score=58.70 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=63.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH----HHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
+.|++.+.++.+++.|++|+.+|||.. .++..+.+.+|+.........+.+.. .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC----------------------C
Confidence 357999999999999999999999974 46666677789864322222222211 0
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEc
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV 609 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIam 609 (672)
....|...++. ...++++||..+|..+-+.|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11235555553 3589999999999999999984 4544
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.38 E-value=0.0039 Score=59.27 Aligned_cols=62 Identities=26% Similarity=0.304 Sum_probs=44.6
Q ss_pred HHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCe-eEEcccc---cHHHhh---ccCEEEcCCChhHHHHHHH
Q 005879 574 YEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVADA---TDAARS---ASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 574 ~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~v-gIamg~~---~~~~k~---~ad~v~~~~~~~~i~~~i~ 637 (672)
..+.+.+....+.++||||+. +|+.+-+.||+ +|.+..| .+.... .+|+++ +++..+.++|+
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l~ 261 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAVQ 261 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHHC
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHhC
Confidence 566777777788999999995 69999999997 5555322 222332 359999 46888877663
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.36 E-value=0.0013 Score=62.44 Aligned_cols=57 Identities=18% Similarity=0.126 Sum_probs=38.6
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCc-cCHHHHhhCCe-eEEc--ccccHHHh----hccCEEEcC
Q 005879 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAV--ADATDAAR----SASDIVLTE 626 (672)
Q Consensus 570 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~v-gIam--g~~~~~~k----~~ad~v~~~ 626 (672)
|+--..+++.++...+.++||||+. +|+.+.+.||+ +|.+ |..+.... ..+|+++.+
T Consensus 179 p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 179 PWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred hhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECC
Confidence 3334566777777778899999996 59999999997 4444 42222222 235888854
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.35 E-value=0.0033 Score=57.93 Aligned_cols=125 Identities=9% Similarity=0.056 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
.+.|++.+.+++|+. +..++|+.....+....+.+|+.... +.....+.... .-.+...|+
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~---------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG---------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC---------------TTCCTTSSH
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhccccccccc-ceeeccccccc---------------ccccccCHH
Confidence 356788888877654 55789999999999999999986432 11111111100 001222333
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCee-EEccccc-------HHHh-hccCEEEcCCChhHHHHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAAR-SASDIVLTEPGLSVIISAVL 637 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-Iamg~~~-------~~~k-~~ad~v~~~~~~~~i~~~i~ 637 (672)
-=....+.++...+.++||||+.+|+.+-+.||+- |++.++. +... .-||+++ +++..+..+|.
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 34567777777778899999999999999999974 4443321 1122 2389999 44677766654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.34 E-value=0.0024 Score=58.81 Aligned_cols=122 Identities=8% Similarity=0.049 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
.+.+++.++++.+++.|+++.++|+-.........+..++.... ..++...+. ...+..|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~-----------------~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeee-----------------eccccHHH
Confidence 34579999999999999999999999988888888887764321 111111111 01223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEEcc----cccHHHhhccCEEEcCCChhHHHH
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIIS 634 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIamg----~~~~~~k~~ad~v~~~~~~~~i~~ 634 (672)
-=..+++.++-..+.++||||..+|+.+-+.||+-...- ...+.....+|+++ +++..+.+
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 446677888877888999999999999999999875542 22333445689988 44666654
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.32 E-value=0.0088 Score=48.78 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=68.1
Q ss_pred CCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhcccceEEEecCCCCCceEEEEEEeCCCeEEEEEcCcHHHHHH
Q 005879 356 GVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN 435 (672)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~KGa~e~i~~ 435 (672)
+.+.++++.+++..+.. +.||++.|++.++.+...........+..|-. ++. ++. +.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~-S~HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~------Gi~-----g~~--v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERR-SEHPIAEAIVKKALEHGIELGEPEKVEVIAGE------GVV-----ADG--ILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTT-CCSHHHHHHHHHHHTTTCCCCCCSCEEEETTT------EEE-----ETT--EEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCc-CCCchHHHHHHHHHHhcCCCCccccceeeccc------eEE-----eEE--EEECcHHHHHh
Confidence 45788888888777554 45699999998865432211122222222211 111 122 23499999876
Q ss_pred hccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCeEEEEEeec
Q 005879 436 LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL 489 (672)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~e~~l~~lG~i~~ 489 (672)
..- +.++.+.+.++.+..+|..++.++... .++|++++
T Consensus 75 ~~~---~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cCC---CCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 432 345567788899999999999999987 89999986
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.18 E-value=0.0045 Score=56.91 Aligned_cols=112 Identities=7% Similarity=0.019 Sum_probs=74.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccCh
Q 005879 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (672)
Q Consensus 491 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (672)
.++-|++.+.++.|++.|+++.++|+... +....+..|+.... ..++.+.+. ...+-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF--DAIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC--SEECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc--ccccccccc-----------------cccccCh
Confidence 34678999999999999999999999765 45677778875321 111111111 1223334
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcccccHHHhhccCEEEc
Q 005879 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLT 625 (672)
Q Consensus 571 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~~~~~~k~~ad~v~~ 625 (672)
+-=..+.+.++...+.++||||..+|+.+-+.||+ .|+++.+. ....++.++.
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~~ 202 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEES
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh--hcccccEEcC
Confidence 33356667777777889999999999999999997 44444332 2334666554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.17 E-value=0.0025 Score=58.55 Aligned_cols=138 Identities=19% Similarity=0.090 Sum_probs=73.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCcccccccccccCCCccHH
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (672)
.+-|++.++|+.|+++|+++.++|..+. .......+..|+....+........... .
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~------- 119 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVG-P------- 119 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCS-T-------
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccc-c-------
Confidence 3568999999999999999999996331 1122223334432110000000000000 0
Q ss_pred HHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcccccHHHhhccCEEEcC-CChhHHHH
Q 005879 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTE-PGLSVIIS 634 (672)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~~~~~~k~~ad~v~~~-~~~~~i~~ 634 (672)
.......+..-.|.--..+++.++...+.++||||..+|+.|-+.||+ +|.+..+.... ..+....+ .+...+.+
T Consensus 120 -~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~--~~~~~~~~~~~~~e~~d 196 (209)
T d2o2xa1 120 -LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV--QPGFAIRPLRDSSELGD 196 (209)
T ss_dssp -TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE--ETTEEEEEESSHHHHHH
T ss_pred -ccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc--cCCccccCccchhHHHH
Confidence 000000112233444456677777777789999999999999999999 55554332211 23333321 34555555
Q ss_pred HHHHHH
Q 005879 635 AVLTSR 640 (672)
Q Consensus 635 ~i~~gr 640 (672)
++....
T Consensus 197 ll~~v~ 202 (209)
T d2o2xa1 197 LLAAIE 202 (209)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.16 E-value=0.0044 Score=56.39 Aligned_cols=141 Identities=16% Similarity=0.158 Sum_probs=87.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccccccccc-CCCccHHHHhhcc---------
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDES-IAALPIDELIEKA--------- 562 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------- 562 (672)
+-|++.++++.+++. ....++|---.+-.+++++.+|+..+.... .-+++.. ....+.+++++..
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T----~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGT----EVDFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEE----BCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecc----cccccccCCChHHHHHHHHHhhhccCccHH
Confidence 458999999999865 567777777777889999999996431110 0011100 0000111111000
Q ss_pred -------Ceeccc---------C---hhhHHHHHHHHhhC--CCEEEEECCCccCHHHHhhCCe--eEEcc-cccHHHhh
Q 005879 563 -------DGFAGV---------F---PEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADI--GIAVA-DATDAARS 618 (672)
Q Consensus 563 -------~v~~~~---------~---p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~v--gIamg-~~~~~~k~ 618 (672)
.+|.++ . ...|..+++..-.. -...+++||++.|..||+.|.= |+|++ ||.+-+..
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~ 236 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALK 236 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHT
T ss_pred HHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccc
Confidence 112221 1 13455554433221 1234899999999999999844 78887 88888999
Q ss_pred ccCEEEcCCChhHHHHHHHH
Q 005879 619 ASDIVLTEPGLSVIISAVLT 638 (672)
Q Consensus 619 ~ad~v~~~~~~~~i~~~i~~ 638 (672)
.||+.+.+.+...+...+..
T Consensus 237 eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 237 HADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TCSEEEECSSTHHHHHHHHH
T ss_pred ccceEEeccchhHHHHHHHH
Confidence 99999999888887776654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.67 E-value=0.006 Score=55.96 Aligned_cols=106 Identities=9% Similarity=0.027 Sum_probs=69.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc----HHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecc
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (672)
.+.|++.+.++.|+++|+++.++|+.. ...........|+.... ..++.+.+. ....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f--d~i~~s~~~-----------------~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF--DFLIESCQV-----------------GMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC--SEEEEHHHH-----------------SCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh--ceeeehhhc-----------------cCCC
Confidence 356899999999999999999999633 22334444455543210 011111000 0223
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcccccHHH
Q 005879 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAA 616 (672)
Q Consensus 568 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~~~~~~ 616 (672)
-.|+--...++.++...+.++||||..+|+.+-+.||+ +|.+.++.+..
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 34555677788888888899999999999999999997 55554554443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=95.29 E-value=0.026 Score=52.26 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeecccChh
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (672)
++-+++.+++++|+ |+.+.++|..+...+....+..|+.... ..++.+++.. ..+-.|+
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~~-----------------~~KP~p~ 151 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--cccccccccc-----------------ccCccHH
Confidence 45688999999885 7788999999988888888888875321 1222221111 1223344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE-cc-cccH-------------------------HHhhccCEEE
Q 005879 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VA-DATD-------------------------AARSASDIVL 624 (672)
Q Consensus 572 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa-mg-~~~~-------------------------~~k~~ad~v~ 624 (672)
-=..+++.++.+.+.+++|||+.+|+.+-+.||+--. +. .+.+ .....+|+++
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i 231 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE
Confidence 3466778888777889999999999999999997432 21 1100 0112479998
Q ss_pred cCCChhHHHHHHH
Q 005879 625 TEPGLSVIISAVL 637 (672)
Q Consensus 625 ~~~~~~~i~~~i~ 637 (672)
+++..+..+|+
T Consensus 232 --~~l~el~~lv~ 242 (245)
T d1qq5a_ 232 --PALGDLPRLVR 242 (245)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 56888888775
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.20 E-value=0.0021 Score=56.49 Aligned_cols=100 Identities=11% Similarity=-0.011 Sum_probs=56.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc--------HHH-------HHHHHHHhCCCCCCCC-CcccccccccccCCCccH
Q 005879 492 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAI-------GKETGRRLGMGTNMYP-SSALLGQDKDESIAALPI 555 (672)
Q Consensus 492 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~~-------a~~ia~~~gi~~~~~~-~~~~~~~~~~~~~~~~~~ 555 (672)
.+-|++.++|+.|+++|++++++|..+ ... ........|+....+. ........
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~---------- 99 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADE---------- 99 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGC----------
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeecccccccc----------
Confidence 356899999999999999999999753 111 1122233343210000 00000000
Q ss_pred HHHhhccCeecccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCeeEE
Q 005879 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (672)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgIa 608 (672)
.-+..-.|.-=.++++.++...+.++||||...|..|-+.||+---
T Consensus 100 -------~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i 145 (161)
T d2fpwa1 100 -------CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGL 145 (161)
T ss_dssp -------CSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEE
T ss_pred -------ccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEE
Confidence 0011222333345556666667789999999999999999998743
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.92 E-value=0.015 Score=54.85 Aligned_cols=60 Identities=25% Similarity=0.264 Sum_probs=42.3
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCcc-CHHHHhhCCe-eEEcccc---cHHHhhc---cCEEEcC
Q 005879 567 GVFPEHKYEIVKRLQARKHICGMTGDGVN-DAPALKKADI-GIAVADA---TDAARSA---SDIVLTE 626 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~N-D~~al~~A~v-gIamg~~---~~~~k~~---ad~v~~~ 626 (672)
.-+|.--..+++.++...+.++||||..+ |+.+-+.||+ +|.+..| .+...+. +|+++.+
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 33455556777888877889999999966 9999999999 7776322 2223333 4898843
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.64 E-value=0.011 Score=53.75 Aligned_cols=101 Identities=11% Similarity=0.001 Sum_probs=63.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHH----HHHHHHHhCCCCCCCCCcccccccccccCCCccHHHHhhccCeeccc
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (672)
+.+++.+.++.|++.|++++++|+..... ........++... -..++.+.+. ....-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~--fd~i~~s~~~-----------------~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH--FDFLIESCQV-----------------GMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT--SSEEEEHHHH-----------------TCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh--ccEEEecccc-----------------ccchh
Confidence 56899999999999999999999754322 1222222232110 0111111100 01223
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcccc
Q 005879 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADA 612 (672)
Q Consensus 569 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~~ 612 (672)
.|+-=..+++.++...+.++||||...|+.+-+.||+ +|.+.++
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 3444466777777777789999999999999999999 5555443
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=90.45 E-value=0.011 Score=52.36 Aligned_cols=96 Identities=9% Similarity=0.050 Sum_probs=60.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh-CCCCCCCCCcccccccccccCCCccHHHHhhccC-----eec
Q 005879 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-GMGTNMYPSSALLGQDKDESIAALPIDELIEKAD-----GFA 566 (672)
Q Consensus 493 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~ 566 (672)
+.+++.+.+..++..|+++.++|+-+...+....... |+ ....+..- ...
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l------------------------~~~fd~v~~s~~~~~~ 140 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI------------------------RDAADHIYLSQDLGMR 140 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH------------------------HHHCSEEEEHHHHTCC
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccc------------------------hhhccceeeccccccc
Confidence 5688999999999999999999976533221111110 11 11100000 011
Q ss_pred ccChhhHHHHHHHHhhCCCEEEEECCCccCHHHHhhCCe-eEEcccc
Q 005879 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADA 612 (672)
Q Consensus 567 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gIamg~~ 612 (672)
...|+-=..+++.++-..+.++||||..+|+.+-+.||+ +|.+.+.
T Consensus 141 Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~ 187 (197)
T d2b0ca1 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 187 (197)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred ccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 223333356667777777889999999999999999997 5555543
|