BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005880
(672 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 174/300 (58%), Gaps = 23/300 (7%)
Query: 353 KRFELEDLLRAS-----AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI-GGKREFEQH 406
KRF L +L AS +LG+GGFG YK L DG++VAVKRLK+ GG+ +F+
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E++ H NL+ L+ + E+LLV YM NGS+ L R + PLDW R +I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRI 144
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP------PSTV 520
A G+ARGLA++H C K+ H ++K+ N+LLD+ A V DFGL+ V
Sbjct: 145 ALGSARGLAYLHDHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLP 580
+ G+ APE S+ K S+K+DV+ +GV+LLEL+TG+ + V L
Sbjct: 204 RGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQRAFDL----ARLANDDDVMLL 257
Query: 581 RWVQSVVREEWTAEVFDLELM-RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639
WV+ +++E+ + D++L YKD EE+ L+QVA+ CT +SP +RP MS VV+++E
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 172/300 (57%), Gaps = 23/300 (7%)
Query: 353 KRFELEDLLRAS-----AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI-GGKREFEQH 406
KRF L +L AS +LG+GGFG YK L DG +VAVKRLK+ GG+ +F+
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E++ H NL+ L+ + E+LLV YM NGS+ L R + PLDW R +I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRI 136
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP------PSTV 520
A G+ARGLA++H C K+ H ++K+ N+LLD+ A V DFGL+ V
Sbjct: 137 ALGSARGLAYLHDHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLP 580
G+ APE S+ K S+K+DV+ +GV+LLEL+TG+ D V L
Sbjct: 196 RGXIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQ--RAFDLARLANDDD--VMLL 249
Query: 581 RWVQSVVREEWTAEVFDLELM-RYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639
WV+ +++E+ + D++L YKD EE+ L+QVA+ CT +SP +RP MS VV+++E
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 148/291 (50%), Gaps = 42/291 (14%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLK---DASIGG-KREFEQHMEVLGRLRHPNLVGLKA 423
+G+GGFG YK +++ + VAVK+L D + K++F+Q ++V+ + +H NLV L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ ++ LV YMPNGSL L + G PL W R KIA GAA G+ F+H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPR---SNGYRAPELSSSDG 536
H +IKS N+LLD+ A++SDFGL+ FA R + Y APE +
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE- 210
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVF 596
+ KSD+YSFGV+LLE++TG P+ VD R Q ++ + E
Sbjct: 211 --ITPKSDIYSFGVVLLEIITG-LPA--------------VDEHREPQLLLDIKEEIEDE 253
Query: 597 DLELMRYKDIE------EEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+ + Y D + + + VA C ++RP++ V +L++E+
Sbjct: 254 EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 148/291 (50%), Gaps = 42/291 (14%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLK---DASIGG-KREFEQHMEVLGRLRHPNLVGLKA 423
+G+GGFG YK +++ + VAVK+L D + K++F+Q ++V+ + +H NLV L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ ++ LV YMPNGSL L + G PL W R KIA GAA G+ F+H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPR---SNGYRAPELSSSDG 536
H +IKS N+LLD+ A++SDFGL+ FA R + Y APE +
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE- 210
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVF 596
+ KSD+YSFGV+LLE++TG P+ VD R Q ++ + E
Sbjct: 211 --ITPKSDIYSFGVVLLEIITG-LPA--------------VDEHREPQLLLDIKEEIEDE 253
Query: 597 DLELMRYKDIE------EEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+ + Y D + + + VA C ++RP++ V +L++E+
Sbjct: 254 EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 139/280 (49%), Gaps = 21/280 (7%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF 426
++G G FG YK VL DG+ VA+KR S G EFE +E L RHP+LV L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 427 AREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
R E +L+ +YM NG+L L+G+ P + + W RL+I GAARGL ++H + +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARGLHYLH----TRAI 160
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPP-------STVPRSNGYRAPELSSSDGRKQ 539
H ++KS N+LLD+ +++DFG+S V + GY PE GR
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK-GR-L 218
Query: 540 SQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFDLE 599
++KSDVYSFGV+L E+L + V V+L W ++ D
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIV------QSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639
L K E + A+ C + S + RP+M V+ +E
Sbjct: 273 LAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 148/291 (50%), Gaps = 42/291 (14%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLK---DASIGG-KREFEQHMEVLGRLRHPNLVGLKA 423
+G+GGFG YK +++ + VAVK+L D + K++F+Q ++V+ + +H NLV L
Sbjct: 33 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ ++ LV YMPNGSL L + G PL W R KIA GAA G+ F+H
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 146
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPR---SNGYRAPELSSSDG 536
H +IKS N+LLD+ A++SDFGL+ FA R + Y APE +
Sbjct: 147 -HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE- 204
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVF 596
+ KSD+YSFGV+LLE++TG P+ VD R Q ++ + E
Sbjct: 205 --ITPKSDIYSFGVVLLEIITG-LPA--------------VDEHREPQLLLDIKEEIEDE 247
Query: 597 DLELMRYKDIE------EEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+ + Y D + + + VA C ++RP++ V +L++E+
Sbjct: 248 EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 139/280 (49%), Gaps = 21/280 (7%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF 426
++G G FG YK VL DG+ VA+KR S G EFE +E L RHP+LV L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 427 AREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
R E +L+ +YM NG+L L+G+ P + + W RL+I GAARGL ++H + +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARGLHYLH----TRAI 160
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPP-------STVPRSNGYRAPELSSSDGRKQ 539
H ++KS N+LLD+ +++DFG+S V + GY PE GR
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK-GR-L 218
Query: 540 SQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFDLE 599
++KSDVYSFGV+L E+L + V V+L W ++ D
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIV------QSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 600 LMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIE 639
L K E + A+ C + S + RP+M V+ +E
Sbjct: 273 LAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 21/201 (10%)
Query: 369 GKGGFGTAYKAVLDDGSVVAVKRLK---DASIGG-KREFEQHMEVLGRLRHPNLVGLKAY 424
G+GGFG YK +++ + VAVK+L D + K++F+Q ++V + +H NLV L +
Sbjct: 31 GEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
++ LV Y PNGSL L + G PL W R KIA GAA G+ F+H
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLHEN---- 143
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPR---SNGYRAPELSSSDGR 537
H +IKS N+LLD+ A++SDFGL+ FA R + Y APE +
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE-- 201
Query: 538 KQSQKSDVYSFGVLLLELLTG 558
+ KSD+YSFGV+LLE++TG
Sbjct: 202 -ITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 10/201 (4%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKR--EFEQHMEVLGRLRHPNLVGLKA 423
E +G G FGT ++A GS VAVK L + +R EF + + ++ RLRHPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+V+EY+ GSL+ LLH + R LD RL +A A+G+ ++H ++
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLH--NRN 157
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSD---GRKQS 540
+ H N+KS N+L+DK +V DFGLS + + + PE + + +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+KSDVYSFGV+L EL T + P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKR--EFEQHMEVLGRLRHPNLVGLKA 423
E +G G FGT ++A GS VAVK L + +R EF + + ++ RLRHPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+V+EY+ GSL+ LLH + R LD RL +A A+G+ ++H ++
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLH--NRN 157
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGL-----SIFAPPSTVPRSNGYRAPELSSSDGRK 538
+ H ++KS N+L+DK +V DFGL S F + + APE+ +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE--P 215
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
++KSDVYSFGV+L EL T + P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQH 406
G +++ LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRS 523
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S T+ +
Sbjct: 114 ITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 169
Query: 524 NGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 170 LDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQH 406
G++++ LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 4 GSRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 116
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG- 525
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S G
Sbjct: 117 ITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 172
Query: 526 --YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 173 LDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQH 406
G +++ LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG- 525
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S G
Sbjct: 114 ITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGT 169
Query: 526 --YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 170 LDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQH 406
G++++ LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 4 GSRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 116
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG- 525
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S G
Sbjct: 117 ITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT 172
Query: 526 --YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 173 LDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQH 406
G +++ LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 1 GKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG- 525
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S G
Sbjct: 114 ITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 169
Query: 526 --YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 170 LDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQH 406
G +++ LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 1 GKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG- 525
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S G
Sbjct: 114 ITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGT 169
Query: 526 --YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 170 LDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQH 406
+++ LED LGKG FG Y A + ++A+K L A + G + + +
Sbjct: 1 AKRQWALEDF--EIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG- 525
A L++ C S K+ H +IK N+LL G +++DFG S+ AP S G
Sbjct: 114 ITELANALSY----CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
Query: 526 --YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 170 LDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G ++ L + D A L++ C S
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSY----CHS 131
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEM--IEGRMHD 189
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G ++ L + D A L++ C S
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSY----CHS 131
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 189
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 152
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 210
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPP 231
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 351 GTKR-FELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQ 405
G+KR + LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 4 GSKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 406 HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTAT 116
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPR 522
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S T+
Sbjct: 117 YITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 172
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 173 TLDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 143
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 201
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPP 222
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGK-------REFEQHMEVLGRLRHPNLV 419
+GKGGFG +K ++ D SVVA+K L G+ +EF++ + ++ L HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K Y +V E++P G L+ L P+ W+ +L++ A G+ ++
Sbjct: 87 --KLYGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ- 139
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGN-----ARVSDFGLSIFAPPSTVPRSNGYR--APELS 532
++ + H +++S N+ L A+V+DFGLS + S ++ APE
Sbjct: 140 -NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWT 592
++ ++K+D YSF ++L +LTG+ P D +++REE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFI---------NMIREEG- 246
Query: 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+R E+ L V C S P +RP+ S++VK + EL
Sbjct: 247 --------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 129
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 187
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 131
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 189
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPP 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 127
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM--IEGRMHD 185
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPP 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 366 EMLGKGGFGTAYKA--VLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHPNLVGLK 422
E++G GGFG Y+A + D+ +V A + D I E Q ++ L+HPN++ L+
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
LV E+ G L +L G R P ++W ++ ARG+ ++H
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDEA- 125
Query: 483 SLKLTHGNIKSTNVL-LDKTGNA-------RVSDFGLSIFAPPSTVPRSNG---YRAPEL 531
+ + H ++KS+N+L L K N +++DFGL+ +T + G + APE+
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ S+ SDV+S+GVLL ELLTG+ P
Sbjct: 186 IRAS--MFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 125
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 183
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPP 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 129
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 187
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 128
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM--IEGRMHD 186
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPP 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 152
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM--IEGRMHD 210
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPP 231
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 127
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM--IEGRMHD 185
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPP 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 126
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM--IEGRMHD 184
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 126
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM--IEGRMHD 184
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 131
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM--IEGRMHD 189
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPP 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 131
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE +GR
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE--XIEGRXHD 189
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 123
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S T+ + Y PE+ +GR
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 181
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPP 202
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 129
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM--IEGRMHD 187
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 126
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRKQS 540
++ H +IK N+LL G +++DFG S+ AP S G Y PE+ +GR
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM--IEGRMHD 184
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPP 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 351 GTKR-FELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQ 405
G KR + LED LGKG FG Y A ++A+K L A + G + + +
Sbjct: 1 GKKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 58
Query: 406 HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
+E+ LRHPN++ L Y+ L+ EY P G+++ L + D
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTAT 113
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPR 522
A L++ C S ++ H +IK N+LL G +++DFG S AP S T+
Sbjct: 114 YITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG 169
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ Y PE+ +GR +K D++S GVL E L GK P
Sbjct: 170 TLDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 128
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G ++++FG S+ AP S T+ + Y PE+ +GR
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 186
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPP 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGK-------REFEQHMEVLGRLRHPNLV 419
+GKGGFG +K ++ D SVVA+K L G+ +EF++ + ++ L HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K Y +V E++P G L+ L P+ W+ +L++ A G+ ++
Sbjct: 87 --KLYGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ- 139
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGN-----ARVSDFGLSIFAPPSTVPRSNGYR--APELS 532
++ + H +++S N+ L A+V+DFG S + S ++ APE
Sbjct: 140 -NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETI 198
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWT 592
++ ++K+D YSF ++L +LTG+ P D +++REE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFI---------NMIREEG- 246
Query: 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+R E+ L V C S P +RP+ S++VK + EL
Sbjct: 247 --------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L A + G + + + +E+ LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y+ L+ EY P G+++ L + D A L++ C S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSY----CHS 129
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNGYRAPELSSSDGRKQS 540
++ H +IK N+LL G ++++FG S+ AP S T+ + Y PE+ +GR
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM--IEGRMHD 187
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
+K D++S GVL E L GK P
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPP 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGK-------REFEQHMEVLGRLRHPNLV 419
+GKGGFG +K ++ D SVVA+K L G+ +EF++ + ++ L HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K Y +V E++P G L+ L P+ W+ +L++ A G+ ++
Sbjct: 87 --KLYGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ- 139
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGN-----ARVSDFGLSIFAPPSTVPRSNGYR--APELS 532
++ + H +++S N+ L A+V+DF LS + S ++ APE
Sbjct: 140 -NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWT 592
++ ++K+D YSF ++L +LTG+ P D +++REE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFI---------NMIREEG- 246
Query: 593 AEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+R E+ L V C S P +RP+ S++VK + EL
Sbjct: 247 --------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 351 GTKR-FELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQ 405
G+KR + LED LGKG FG Y A ++A+K L + G + + +
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 406 HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHG-NRGPGRTPLDWTTRL 464
+E+ LRHPN++ L Y+ L+ EY P G+++ L +R + + T L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVP 521
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S T+
Sbjct: 122 ------ANALSY----CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC 171
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ Y PE+ +GR +K D++S GVL E L G P
Sbjct: 172 GTLDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 351 GTKR-FELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQ 405
G+KR + LED LGKG FG Y A ++A+K L + G + + +
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 406 HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHG-NRGPGRTPLDWTTRL 464
+E+ LRHPN++ L Y+ L+ EY P G+++ L +R + + T L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVP 521
A L++ C S ++ H +IK N+LL G +++DFG S+ AP S T+
Sbjct: 122 ------ANALSY----CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC 171
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ Y PE+ +GR +K D++S GVL E L G P
Sbjct: 172 GTLDYLPPEM--IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 131
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H N+ + N+L++ ++ DFGL+ P P P + A
Sbjct: 132 ---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF--WYA 186
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 187 PESLTES---KFSVASDVWSFGVVLYELFT 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 32/242 (13%)
Query: 335 PAQQAGYERGSM-VFFEGTKRFELEDLLRASAEMLGKGGFGTA----YKAVLDD-GSVVA 388
P + Y +G+M FE + E+ + LGKG FG+ Y + D+ G VVA
Sbjct: 15 PTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA 74
Query: 389 VKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA--YYFAREEKLLVSEYMPNGSLFWL 446
VK+L+ ++ R+FE+ +E+L L+H N+V K Y R L+ EY+P GSL
Sbjct: 75 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134
Query: 447 LHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARV 506
L + + +D L+ + +G+ ++ + + H ++ + N+L++ ++
Sbjct: 135 LQKH----KERIDHIKLLQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKI 186
Query: 507 SDFGLSIFAP----------PSTVPRSNGYRAPE-LSSSDGRKQSQKSDVYSFGVLLLEL 555
DFGL+ P P P + APE L+ S K S SDV+SFGV+L EL
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIF--WYAPESLTES---KFSVASDVWSFGVVLYEL 241
Query: 556 LT 557
T
Sbjct: 242 FT 243
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHM 407
T+ F ++D LGKG FG Y A +VA+K L + I G + + + +
Sbjct: 17 TRHFTIDDF--EIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 74
Query: 408 EVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA 467
E+ L HPN++ L Y++ R L+ EY P G L+ L + D I
Sbjct: 75 EIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-----CTFDEQRTATIM 129
Query: 468 AGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP---STVPRSN 524
A L + C K+ H +IK N+LL G +++DFG S+ AP T+ +
Sbjct: 130 EELADALMY----CHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTL 185
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y PE+ +GR ++K D++ GVL ELL G P
Sbjct: 186 DYLPPEM--IEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 72
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 73 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 124
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H N+++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGT 182
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 222
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 223 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 263
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 31/232 (13%)
Query: 344 GSMVFFEGTKRFELEDLLRASAEMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIG 398
GS FE + E+ + LGKG FG+ Y + D+ G VVAVK+L+ ++
Sbjct: 1 GSSGAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 60
Query: 399 GKREFEQHMEVLGRLRHPNLVGLKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRT 456
R+FE+ +E+L L+H N+V K Y R L+ EY+P GSL L + +
Sbjct: 61 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KE 116
Query: 457 PLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516
+D L+ + +G+ ++ + + H ++ + N+L++ ++ DFGL+ P
Sbjct: 117 RIDHIKLLQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 172
Query: 517 ----------PSTVPRSNGYRAPE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
P P + APE L+ S K S SDV+SFGV+L EL T
Sbjct: 173 QDKEXXKVKEPGESPIF--WYAPESLTES---KFSVASDVWSFGVVLYELFT 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 349 FEGTKRFELEDLLRASAEMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREF 403
FE + E+ + LGKG FG+ Y + D+ G VVAVK+L+ ++ R+F
Sbjct: 2 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 404 EQHMEVLGRLRHPNLVGLKA--YYFAREEKLLVSEYMPNGSL--FWLLHGNRGPGRTPLD 459
E+ +E+L L+H N+V K Y R L+ EY+P GSL + H R +D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER------ID 115
Query: 460 WTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP--- 516
L+ + +G+ ++ + + H ++ + N+L++ ++ DFGL+ P
Sbjct: 116 HIKLLQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 517 -------PSTVPRSNGYRAPE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
P P + APE L+ S K S SDV+SFGV+L EL T
Sbjct: 172 EXXKVKEPGESPIF--WYAPESLTES---KFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 32/232 (13%)
Query: 344 GSMVFFEGTKRFELEDLLRASAEMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIG 398
G+M F E + E+ + LGKG FG+ Y + D+ G VVAVK+L+ ++
Sbjct: 1 GAMAF-EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 59
Query: 399 GKREFEQHMEVLGRLRHPNLVGLKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRT 456
R+FE+ +E+L L+H N+V K Y R L+ EY+P GSL L + +
Sbjct: 60 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KE 115
Query: 457 PLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516
+D L+ + +G+ ++ + + H ++ + N+L++ ++ DFGL+ P
Sbjct: 116 RIDHIKLLQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 171
Query: 517 ----------PSTVPRSNGYRAPE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
P P + APE L+ S K S SDV+SFGV+L EL T
Sbjct: 172 QDKEXXKVKEPGESPIF--WYAPESLTES---KFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 128
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 129 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYA 183
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 184 PESLTES---KFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 129
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 130 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYA 184
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 185 PESLTES---KFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 31/227 (13%)
Query: 349 FEGTKRFELEDLLRASAEMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREF 403
FE + E+ + LGKG FG+ Y + D+ G VVAVK+L+ ++ R+F
Sbjct: 4 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 404 EQHMEVLGRLRHPNLVGLKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
E+ +E+L L+H N+V K Y R L+ EY+P GSL L + + +D
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHI 119
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----- 516
L+ + +G+ ++ + + H ++ + N+L++ ++ DFGL+ P
Sbjct: 120 KLLQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 517 -----PSTVPRSNGYRAPE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
P P + APE L+ S K S SDV+SFGV+L EL T
Sbjct: 176 XKVKEPGESPIF--WYAPESLTES---KFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 130
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYA 185
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 186 PESLTES---KFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 31/227 (13%)
Query: 349 FEGTKRFELEDLLRASAEMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREF 403
FE + E+ + LGKG FG+ Y + D+ G VVAVK+L+ ++ R+F
Sbjct: 3 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 404 EQHMEVLGRLRHPNLVGLKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
E+ +E+L L+H N+V K Y R L+ EY+P GSL L + + +D
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHI 118
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----- 516
L+ + +G+ ++ + + H ++ + N+L++ ++ DFGL+ P
Sbjct: 119 KLLQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 517 -----PSTVPRSNGYRAPE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
P P + APE L+ S K S SDV+SFGV+L EL T
Sbjct: 175 XKVKEPGESPIF--WYAPESLTES---KFSVASDVWSFGVVLYELFT 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 130
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF--WYA 185
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 186 PESLTES---KFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 133
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYA 188
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 189 PESLTES---KFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 130
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYA 185
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 186 PESLTES---KFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 148
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 149 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYA 203
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 204 PESLTES---KFSVASDVWSFGVVLYELFT 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 301
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 359
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 366 EMLGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 421 LKA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
K Y R L+ EY+P GSL L + + +D L+ + +G+ ++
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYL- 148
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRA 528
+ + H ++ + N+L++ ++ DFGL+ P P P + A
Sbjct: 149 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYA 203
Query: 529 PE-LSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE L+ S K S SDV+SFGV+L EL T
Sbjct: 204 PESLTES---KFSVASDVWSFGVVLYELFT 230
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 301
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 359
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 72
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 124
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 182
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 183 IKSDVWSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 74
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 126
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 184
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 185 IKSDVWSFGILLTELTTKGRVP 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 73
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 125
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE-AALYGRF-T 183
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 71
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 72 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 123
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGT 181
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 221
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 222 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 76
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 128
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 186
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 187 IKSDVWSFGILLTELTTKGRVP 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 85
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 86 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 137
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGT 195
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 235
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 236 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 276
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 83 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 134
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGT 192
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 232
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 233 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 86
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 87 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 138
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGT 196
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 236
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 237 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 277
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 128
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGT 186
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 226
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 227 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 83 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 134
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGT 192
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 232
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 233 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V+EYM GSL L G G L + +AA A G+A++ + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 136
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-TI 194
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 81
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 82 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 133
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGT 191
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 231
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 232 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 272
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 84
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 85 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 136
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGT 194
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 234
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 235 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 275
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 78
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 79 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 130
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGT 188
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 228
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 229 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 269
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 128
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGT 186
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 226
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 227 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 128
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGT 186
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 226
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 227 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 77
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 78 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 129
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGT 187
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 227
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 228 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 268
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V EYM GSL L G G L + +AA A G+A++ + +
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 136
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-TI 194
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 301
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 359
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ ++RH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V+EYM GSL L G G L + +AA A G+A++ + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 136
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-TI 194
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L + + G + + + +E+ LRHPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 424 YYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
Y+ R+ L+ E+ P G L+ L HG R+ T ++ A A +H+ C
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS----ATFMEELADA------LHY-C 130
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRK 538
K+ H +IK N+L+ G +++DFG S+ AP G Y PE+ +G+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM--IEGKT 188
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
+K D++ GVL E L G P
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 31/208 (14%)
Query: 368 LGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
LGKG FG+ Y + D+ G VVAVK+L+ ++ R+FE+ +E+L L+H N+V K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 423 A--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
Y R L+ E++P GSL L + + +D L+ + +G+ ++
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKH----KERIDHIKLLQYTSQICKGMEYL--- 133
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP----------PSTVPRSNGYRAPE 530
+ + H ++ + N+L++ ++ DFGL+ P P P + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WYAPE 190
Query: 531 -LSSSDGRKQSQKSDVYSFGVLLLELLT 557
L+ S K S SDV+SFGV+L EL T
Sbjct: 191 SLTES---KFSVASDVWSFGVVLYELFT 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 135
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++ + N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 193
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 250
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + +AA A G+A++ + +
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYV----ERMNY 302
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL + G + APE ++ GR +
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 360
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 361 IKSDVWSFGILLTELTTKGRVP 382
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V EYM GSL L G G L + +AA A G+A++ + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 136
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE-AALYGRF-TI 194
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL 413
F DL+ E+LGKG FG A K + G V+ +K L +R F + ++V+ L
Sbjct: 7 FRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL 64
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
HPN++ + + ++EY+ G+L ++ + W+ R+ A A G
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM----DSQYPWSQRVSFAKDIASG 120
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVP----------R 522
+A++H S+ + H ++ S N L+ + N V+DFGL+ + T P R
Sbjct: 121 MAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 523 SNGY--------RAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
Y APE+ +GR +K DV+SFG++L E++
Sbjct: 177 KKRYTVVGNPYWMAPEM--INGRSYDEKVDVFSFGIVLCEII 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L + + G + + + +E+ LRHPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 424 YYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
Y+ R+ L+ E+ P G L+ L HG R+ T ++ A A +H+ C
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS----ATFMEELADA------LHY-C 131
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRK 538
K+ H +IK N+L+ G +++DFG S+ AP G Y PE+ +G+
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM--IEGKT 189
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
+K D++ GVL E L G P
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V EYM GSL L G G L + +AA A G+A++ + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 136
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-TI 194
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG FG Y A ++A+K L + + G + + + +E+ LRHPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 424 YYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
Y+ R+ L+ E+ P G L+ L HG R+ T ++ A A +H+ C
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS----ATFMEELADA------LHY-C 130
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSDGRK 538
K+ H +IK N+L+ G +++DFG S+ AP G Y PE+ +G+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM--IEGKT 188
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
+K D++ GVL E L G P
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V+EYM G L L G G L + +AA A G+A++ + +
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 136
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-TI 194
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 80
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + ++A A G+A++ + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYV----ERMNY 132
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-T 190
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ F Q +V+ +LRH LV L A +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV-VS 332
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V+EYM GSL L G G L + +AA A G+A++ + +
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 385
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-TI 443
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 444 KSDVWSFGILLTELTTKGRVP 464
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 80
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKL 486
E +V+EYM GSL L G G R P + ++A A G+A++ + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYV----ERMNY 132
Query: 487 THGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQS 540
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE-AALYGRF-T 190
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG+G FG + + + VA+K LK ++ + F Q +V+ +LRH LV L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V EYM G L L G G L + +AA A G+A++ + +
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV----ERMNYV 136
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +V+DFGL+ + G + APE ++ GR +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-AALYGRF-TI 194
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
+G G FG + + VA+K +++ ++ + +F + EV+ +L HP LV L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ LV+E+M +G L L RG T L + G+A++ C +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 126
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++ + N L+ + +VSDFG++ F S G + +PE+ S + S
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS--RYSS 184
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFGVL+ E+ + GK P
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIP 205
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEV------LGRLRHPNLVG 420
+G G FG Y A + + VVA+K++ S GK+ E+ ++ L +LRHPN +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKM---SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 421 LKAYYFAREEKLLVSEY-MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
+ Y LV EY + + S +H + PL + GA +GLA++H
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVH------KKPLQEVEIAAVTHGALQGLAYLH- 171
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFG-LSIFAPPSTVPRSNGYRAPE-LSSSDGR 537
S + H ++K+ N+LL + G ++ DFG SI AP + + + APE + + D
Sbjct: 172 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEG 228
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ K DV+S G+ +EL K P
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPP 252
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEV------LGRLRHPNLVG 420
+G G FG Y A + + VVA+K++ S GK+ E+ ++ L +LRHPN +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKM---SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 421 LKAYYFAREEKLLVSEY-MPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
+ Y LV EY + + S +H + PL + GA +GLA++H
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVH------KKPLQEVEIAAVTHGALQGLAYLH- 132
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFG-LSIFAPPSTVPRSNGYRAPE-LSSSDGR 537
S + H ++K+ N+LL + G ++ DFG SI AP + + + APE + + D
Sbjct: 133 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEG 189
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ K DV+S G+ +EL K P
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPP 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 368 LGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
LGKG FG+ Y + D+ G++VAVK+L+ + +R+F++ +++L L +V +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 423 --AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
+Y R E LV EY+P+G L L +R LD + L ++ +G+ ++
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL--- 127
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP---PSTVPRSNG-----YRAPELS 532
S + H ++ + N+L++ + +++DFGL+ P V R G + APE S
Sbjct: 128 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE-S 185
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
SD S++SDV+SFGV+L EL T
Sbjct: 186 LSDN-IFSRQSDVWSFGVVLYELFT 209
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 41/284 (14%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G G + + + VAVK LK S+ F ++ +L+H LV L A
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+E +++EYM NGSL L + P L L +AA A G+AFI +
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFI----EER 128
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRK 538
H ++++ N+L+ T + +++DFGL+ + G + APE + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE--AINYGT 186
Query: 539 QSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFD 597
+ KSDV+SFG+LL E++T G+ P + P +Q++ R
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLER--------G 226
Query: 598 LELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
++R + EE+ L+++ C P+ RP ++ ++E+
Sbjct: 227 YRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
+G G FG + + VA+K +K+ S+ + +F + EV+ +L HP LV L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ LV E+M +G L L RG T L + G+A++ C +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 145
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++ + N L+ + +VSDFG++ F S G + +PE+ S + S
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS--RYSS 203
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFGVL+ E+ + GK P
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIP 224
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG + + + VA+K LK ++ + F + +++ +L+H LV L A +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAV-VS 74
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +V+EYM GSL L G GR L + +AA A G+A+I + +
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKD--GEGRA-LKLPNLVDMAAQVAAGMAYI----ERMNYI 127
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H +++S N+L+ +++DFGL+ + G + APE ++ GR +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE-AALYGRF-TI 185
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL EL+T G+ P
Sbjct: 186 KSDVWSFGILLTELVTKGRVP 206
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
+G G FGT YK V + ++ D + + F + VL + RH N++ L Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYMT 102
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
++ +V+++ SL+ LH T + IA A+G+ ++H + +
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLH----AKNII 154
Query: 488 HGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YRAPE-LSSSDGRKQ 539
H ++KS N+ L + ++ DFGL S ++ V + G + APE + D
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
S +SDVYS+G++L EL+TG+ P
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH + T + + IA ARG+
Sbjct: 67 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGM 121
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H + + H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 122 DYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH + T + + IA ARG+
Sbjct: 79 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGM 133
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H + + H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 134 DYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
+G G FG + + VA+K +++ ++ + +F + EV+ +L HP LV L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ LV E+M +G L L RG T L + G+A++ C +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 125
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++ + N L+ + +VSDFG++ F S G + +PE+ S + S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS--RYSS 183
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFGVL+ E+ + GK P
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIP 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
+G G FG + + VA+K +++ ++ + +F + EV+ +L HP LV L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ LV E+M +G L L RG T L + G+A++ C +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 123
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++ + N L+ + +VSDFG++ F S G + +PE+ S + S
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS--RYSS 181
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFGVL+ E+ + GK P
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIP 202
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ Y A + +V+++ SL+ LH + T + + IA ARG+
Sbjct: 79 HVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGM 133
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H + + H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 134 DYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 368 LGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
LGKG FG+ Y + D+ G++VAVK+L+ + +R+F++ +++L L +V +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 423 --AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
+Y R+ LV EY+P+G L L +R LD + L ++ +G+ ++
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL--- 130
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST---VPRSNG-----YRAPELS 532
S + H ++ + N+L++ + +++DFGL+ P V R G + APE S
Sbjct: 131 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE-S 188
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
SD S++SDV+SFGV+L EL T
Sbjct: 189 LSDN-IFSRQSDVWSFGVVLYELFT 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
+G G FG + + VA+K +++ ++ + +F + EV+ +L HP LV L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ LV E+M +G L L RG T L + G+A++ C +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 128
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++ + N L+ + +VSDFG++ F S G + +PE+ S + S
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS--RYSS 186
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFGVL+ E+ + GK P
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIP 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VAVK +K+ S+ + EF Q + + +L HP LV
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+V+EY+ NG L L + G G P + L++ G+AF+ +S +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSH-GKGLEP---SQLLEMCYDVCEGMAFL----ESHQFI 126
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++ + N L+D+ +VSDFG++ + S G + APE+ K S
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHY--FKYSS 184
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV++FG+L+ E+ + GK P
Sbjct: 185 KSDVWAFGILMWEVFSLGKMP 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 368 LGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
LGKG FG+ Y + D+ G++VAVK+L+ + +R+F++ +++L L +V +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 423 --AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
+Y R+ LV EY+P+G L L +R LD + L ++ +G+ ++
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL--- 143
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST---VPRSNG-----YRAPELS 532
S + H ++ + N+L++ + +++DFGL+ P V R G + APE S
Sbjct: 144 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE-S 201
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
SD S++SDV+SFGV+L EL T
Sbjct: 202 LSDN-IFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 368 LGKGGFGTA----YKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
LGKG FG+ Y + D+ G++VAVK+L+ + +R+F++ +++L L +V +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 423 --AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
+Y R+ LV EY+P+G L L +R LD + L ++ +G+ ++
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL--- 131
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST---VPRSNG-----YRAPELS 532
S + H ++ + N+L++ + +++DFGL+ P V R G + APE S
Sbjct: 132 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE-S 189
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
SD S++SDV+SFGV+L EL T
Sbjct: 190 LSDN-IFSRQSDVWSFGVVLYELFT 213
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 28 DLNALLDFKASSDEANKLTTWNSTSDPC--SWTGVSCLQN----RVSHLVLENLQLSGSL 81
D ALL K L++W T+D C +W GV C + RV++L L L L
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 82 QPLTSLTQLRVLSLKY----NRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFR 136
+SL L L+ Y N GP+P +++ LT L L+++H N +G PD +S +
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 137 LYRLDLSFNNFSGQIPXXXXXXXXXXXXXXEANRFSGPIT---GLDLRNLQDFNVSGNHL 193
L LD S+N SG +P + NR SG I G + +S N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 194 SGQIPKSLS 202
+G+IP + +
Sbjct: 187 TGKIPPTFA 195
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 35/179 (19%)
Query: 77 LSGSLQP-LTSLTQLRVLSLKYNRFTGPVP----SLSNLTALKLLFLSHNNFNGEFPDSV 131
LSG+L P ++SL L ++ NR +G +P S S L + +S N G+ P +
Sbjct: 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL--FTSMTISRNRLTGKIPPTF 194
Query: 132 SSLFRLYRLDLSFNNFSGQIPXXXXXXXXXXXXXXEANRF---------SGPITGLDLRN 182
++L L +DLS N G N S + GLDLRN
Sbjct: 195 ANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRN 253
Query: 183 ----------------LQDFNVSGNHLSGQIPK--SLSGFPDSAFTQNAALCGSPMQAC 223
L NVS N+L G+IP+ +L F SA+ N LCGSP+ AC
Sbjct: 254 NRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 39/275 (14%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG + A + + VAVK +K S+ + F V+ L+H LV L A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAV-VT 247
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+E +++E+M GSL L + G + PL + +A A G+AFI +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPL--PKLIDFSAQIAEGMAFI----EQRNYI 300
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYS 547
H ++++ N+L+ + +++DFGL+ + + APE + + + KSDV+S
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAKFPI----KWTAPE--AINFGSFTIKSDVWS 354
Query: 548 FGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFDLELMRYKDI 606
FG+LL+E++T G+ P + P ++++ R + R ++
Sbjct: 355 FGILLMEIVTYGRIP------------YPGMSNPEVIRALER--------GYRMPRPENC 394
Query: 607 EEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
EE L + M C P++RP ++ ++++
Sbjct: 395 PEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 41/281 (14%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG + A + + VAVK +K S+ + F V+ L+H LV L A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAV-VT 80
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+E +++E+M GSL L + G + PL + +A A G+AFI +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPL--PKLIDFSAQIAEGMAFI----EQRNYI 133
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +++DFGL+ + G + APE + + +
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGSFTI 191
Query: 542 KSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFDLEL 600
KSDV+SFG+LL+E++T G+ P + P ++++ R +
Sbjct: 192 KSDVWSFGILLMEIVTYGRIP------------YPGMSNPEVIRALER--------GYRM 231
Query: 601 MRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
R ++ EE L + M C P++RP ++ ++++
Sbjct: 232 PRPENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 58/291 (19%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
E++G+G FG KA V A+K+++ S ++ F + L R+ HPN+V K Y
Sbjct: 15 EVVGRGAFGVVCKAKWRAKDV-AIKQIESES--ERKAFIVELRQLSRVNHPNIV--KLYG 69
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR---LKIAAGAARGLAFIHFTCK 482
LV EY GSL+ +LHG PL + T + ++G+A++H + +
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLH-SMQ 123
Query: 483 SLKLTHGNIKSTNVLLDKTGNA-RVSDFGLS--IFAPPSTVPRSNGYRAPELSSSDGRKQ 539
L H ++K N+LL G ++ DFG + I + S + APE+ +G
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF--EGSNY 181
Query: 540 SQKSDVYSFGVLLLELLTGKCP---------SVIDXXXXXXXXXXXVDLPRWVQSVVREE 590
S+K DV+S+G++L E++T + P ++ +LP+ ++S++
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR- 240
Query: 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
C S P QRP+M +VK++ L
Sbjct: 241 -----------------------------CWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 58/291 (19%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
E++G+G FG KA V A+K+++ S ++ F + L R+ HPN+V K Y
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDV-AIKQIESES--ERKAFIVELRQLSRVNHPNIV--KLYG 68
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR---LKIAAGAARGLAFIHFTCK 482
LV EY GSL+ +LHG PL + T + ++G+A++H + +
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLH-SMQ 122
Query: 483 SLKLTHGNIKSTNVLLDKTGNA-RVSDFGLS--IFAPPSTVPRSNGYRAPELSSSDGRKQ 539
L H ++K N+LL G ++ DFG + I + S + APE+ +G
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF--EGSNY 180
Query: 540 SQKSDVYSFGVLLLELLTGKCP---------SVIDXXXXXXXXXXXVDLPRWVQSVVREE 590
S+K DV+S+G++L E++T + P ++ +LP+ ++S++
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR- 239
Query: 591 WTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
C S P QRP+M +VK++ L
Sbjct: 240 -----------------------------CWSKDPSQRPSMEEIVKIMTHL 261
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 41/281 (14%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG + A + + VAVK +K S+ + F V+ L+H LV L A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAV-VT 253
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+E +++E+M GSL L + G + PL + +A A G+AFI +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPL--PKLIDFSAQIAEGMAFI----EQRNYI 306
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ N+L+ + +++DFGL+ + G + APE + + +
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGSFTI 364
Query: 542 KSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFDLEL 600
KSDV+SFG+LL+E++T G+ P + P ++++ R +
Sbjct: 365 KSDVWSFGILLMEIVTYGRIP------------YPGMSNPEVIRALER--------GYRM 404
Query: 601 MRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
R ++ EE L + M C P++RP ++ ++++
Sbjct: 405 PRPENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG + A D +VAVK LKDAS +++F + E+L L+H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 422 KAYYFAREEKLLVSEYMPNGSL--FWLLHG------NRGPGRTPLDWTTRLKIAAGAARG 473
+ ++V EYM +G L F HG G T L + L IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGY-----RA 528
+ ++ S H ++ + N L+ + ++ DFG+S + R G+ R
Sbjct: 141 MVYL----ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCP 561
S RK + +SDV+S GV+L E+ T GK P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG + ++ + VAVK LK ++ + F + ++ L+H LV L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +++EYM GSL L + G G+ L + +A A G+A+I +
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYI----ERKNYI 132
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ NVL+ ++ +++DFGL+ + G + APE + +
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF--TI 190
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL E++T GK P
Sbjct: 191 KSDVWSFGILLYEIVTYGKIP 211
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 140
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 141 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 196
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 197 G-ATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 139
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 196 G-ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 158
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 159 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 214
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 215 G-ATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 139
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 196 G-ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 139
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 196 G-ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 151
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 152 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 208 G-ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 147
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 148 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 203
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 204 G-ATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 58/301 (19%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG + A D +VAVK LKD ++ +++F++ E+L L+H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 422 KAYYFAREEKLLVSEYMPNGSL-----------FWLLHGNRGPGRTPLDWTTRLKIAAGA 470
+ ++V EYM +G L L+ G + L + L IA+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGY---- 526
A G+ ++ S H ++ + N L+ ++ DFG+S + R G+
Sbjct: 143 ASGMVYL----ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 527 -RAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQ 584
R S RK + +SDV+SFGV+L E+ T GK P W Q
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP--------------------WFQ 238
Query: 585 ----SVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEE 640
V+ V + + K++ + M+G C P QR N+ + K++
Sbjct: 239 LSNTEVIECITQGRVLERPRVCPKEVYDVMLG-------CWQREPQQRLNIKEIYKILHA 291
Query: 641 L 641
L
Sbjct: 292 L 292
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 152
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 153 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 208
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 209 G-ATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 139
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 196 G-ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
+G G FG + + VA+K +++ ++ + +F + EV+ +L HP LV L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ LV E+M +G L L RG T L + G+A++ + +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYL----EEASVI 125
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++ + N L+ + +VSDFG++ F S G + +PE+ S + S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS--RYSS 183
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KSDV+SFGVL+ E+ + GK P
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIP 204
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 167
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPEL-- 531
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 168 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGK 559
++D + DV+S G +L ELL G+
Sbjct: 224 GATD---YTSSIDVWSAGCVLAELLLGQ 248
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + GK + ++++ +L H N+V L+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 139
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 196 G-ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 144
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 145 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 200
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 201 G-ATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 151
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 152 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 208 G-ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 143
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 144 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 199
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 200 G-ATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + GK + ++++ +L H N+V L+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 139
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 196 G-ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 173
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPEL-- 531
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 174 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 229
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGK 559
++D + DV+S G +L ELL G+
Sbjct: 230 GATD---YTSSIDVWSAGCVLAELLLGQ 254
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 173
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPEL-- 531
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 174 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGK 559
++D + DV+S G +L ELL G+
Sbjct: 230 GATD---YTSSIDVWSAGCVLAELLLGQ 254
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + GK + ++++ +L H N+V L+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 139
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPELSS 533
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGK 559
+ DV+S G +L ELL G+
Sbjct: 196 G-ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 177
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPEL-- 531
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 178 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGK 559
++D + DV+S G +L ELL G+
Sbjct: 234 GATD---YTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 175
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPEL-- 531
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 176 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGK 559
++D + DV+S G +L ELL G+
Sbjct: 232 GATD---YTSSIDVWSAGCVLAELLLGQ 256
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 347 VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQ 405
++F+ ++E+E LG G +G Y V S+ VAVK LK+ ++ EF +
Sbjct: 19 LYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLK 77
Query: 406 HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
V+ ++HPNLV L +V+EYMP G+L L R R + L
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLY 134
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG 525
+A + + ++ + H ++ + N L+ + +V+DFGLS T G
Sbjct: 135 MATQISSAMEYL----EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG 190
Query: 526 ------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE S S KSDV++FGVLL E+ T
Sbjct: 191 AKFPIKWTAPE--SLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL-DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G G FG Y+A L D G +VA+K++ + KR + ++++ +L H N+V L+ +
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 425 YFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+++ EK LV +Y+P H +R P+ + R LA+IH
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--LFRSLAYIH 218
Query: 479 FTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSNGYRAPEL-- 531
S + H +IK N+LLD T ++ DFG L P + S YRAPEL
Sbjct: 219 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGK 559
++D + DV+S G +L ELL G+
Sbjct: 275 GATD---YTSSIDVWSAGCVLAELLLGQ 299
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 366 EMLGKGGFGTAYKAVLDDGS-----VVAVKRLKDASIGGKR-EFEQHMEVLGRLRHPNLV 419
+++G G FG YK +L S VA+K LK +R +F ++G+ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L+ + ++++EYM NG+L L G + L++ G RG+A
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGE-------FSVLQL-VGMLRGIAAGMK 161
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA---PPSTVPRSNG-----YRAPEL 531
++ H ++ + N+L++ +VSDFGLS P +T S G + APE
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
S RK + SDV+SFG+++ E++T
Sbjct: 222 ISY--RKFTSASDVWSFGIVMWEVMT 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 366 EMLGKGGFGTAY--KAVL--DDGSVVAVKRLKDASIGGKREFEQHME--VLGRLRHPNLV 419
++LG+G FG + + V D G + A+K LK A++ + ME +L + HP +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 420 GLKAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
L Y F E KL L+ +++ G LF L ++ T D L A A GL +H
Sbjct: 94 KLH-YAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL---AELALGLDHLH 147
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA-----PPSTVPRSNGYRAPELSS 533
SL + + ++K N+LLD+ G+ +++DFGLS A + + Y APE+ +
Sbjct: 148 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G S +D +S+GVL+ E+LTG P
Sbjct: 204 RQG--HSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 122
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 123 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 63 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 117
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 118 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 65 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 119
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 120 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 176 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 366 EMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG+G +G+ YKA+ + G +VA+K++ S +E + + ++ + P++V
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
YF + +V EY GS+ ++ R T + T I +GL ++HF +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIR-LRNKTLTEDEIAT---ILQSTLKGLEYLHF----M 144
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLS-----IFAPPSTVPRSNGYRAPELSSSDGRKQ 539
+ H +IK+ N+LL+ G+A+++DFG++ A + V + + APE+ G
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGY-- 202
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
+ +D++S G+ +E+ GK P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +G+G GT Y A+ + G VA++++ K + V+ ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
Y +E +V EY+ GSL ++ T +D + + L F+H S
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 136
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-----YRAPELSSSDGRKQ 539
++ H NIKS N+LL G+ +++DFG P RS + APE+ + +
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAY 194
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
K D++S G++ +E++ G+ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 63 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 117
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 118 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 122
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 123 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ Y A + +V+++ SL+ LH T + + IA A+G+
Sbjct: 63 HVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 117
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 118 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 82
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 83 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 137
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 138 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 366 EMLGKGGFGTAYKAVLDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLVG 420
+++G+G FG KA + + A+KR+K+ AS R+F +EVL +L HPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP-----------LDWTTRLKIAAG 469
L R L EY P+G+L L +R P L L AA
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---Y 526
ARG+ ++ + H N+ + N+L+ + A+++DFGLS V ++ G
Sbjct: 148 VARGMDYL----SQKQFIHRNLAARNILVGENYVAKIADFGLS-RGQEVYVKKTMGRLPV 202
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
R + S + + SDV+S+GVLL E+++
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG + A D +VAVK LK+AS +++F++ E+L L+H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 422 KAYYFAREEKLLVSEYMPNGSL--FWLLHG----------NRGPGRTPLDWTTRLKIAAG 469
L+V EYM +G L F HG + PG PL L +A+
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 143
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---- 525
A G+ ++ L H ++ + N L+ + ++ DFG+S + R G
Sbjct: 144 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCP 561
+ PE S RK + +SDV+SFGV+L E+ T GK P
Sbjct: 200 PIRWMPPE--SILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 145
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 146 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 356 ELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH 415
E ++ + +++G G FG ++A L + VA+K++ + KR + ++++ ++H
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKH 91
Query: 416 PNLVGLKAYYFAREEKL------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG 469
PN+V LKA++++ +K LV EY+P H + P+ +L +
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM-LLIKLYMYQ- 149
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFG----LSIFAPPSTVPRSN 524
R LA+IH S+ + H +IK N+LLD +G ++ DFG L P + S
Sbjct: 150 LLRSLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
YRAPEL + D++S G ++ EL+ G+
Sbjct: 206 YYRAPELIFG-ATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 347 VFFEGTKRFELEDLLRASAEM---LGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKRE 402
++F+G+ ++ ++ R M LG G +G Y+ V S+ VAVK LK+ ++ + E
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 68
Query: 403 FEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTT 462
F + V+ ++HPNLV L +++E+M G+L L R R ++
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVV 125
Query: 463 RLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR 522
L +A + + ++ + H ++ + N L+ + +V+DFGLS T
Sbjct: 126 LLYMATQISSAMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
Query: 523 SNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE S K S KSDV++FGVLL E+ T
Sbjct: 182 HAGAKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 145
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 146 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+E+ D + +G G FGT YK V + + + + F+ + VL + R
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
H N++ L Y + + +V+++ SL+ LH T + + IA A+G+
Sbjct: 90 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGM 144
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNG---YR 527
++H KS+ H ++KS N+ L + ++ DFGL S ++ + +G +
Sbjct: 145 DYLH--AKSI--IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 528 APE-LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE + D S +SDVY+FG++L EL+TG+ P
Sbjct: 201 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG + A D +VAVK LK+AS +++F++ E+L L+H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 422 KAYYFAREEKLLVSEYMPNGSL--FWLLHG----------NRGPGRTPLDWTTRLKIAAG 469
L+V EYM +G L F HG + PG PL L +A+
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 137
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---- 525
A G+ ++ L H ++ + N L+ + ++ DFG+S + R G
Sbjct: 138 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCP 561
+ PE S RK + +SDV+SFGV+L E+ T GK P
Sbjct: 194 PIRWMPPE--SILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG + ++ + VAVK LK ++ + F + ++ L+H LV L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
E +++E+M GSL L + G G+ L + +A A G+A+I +
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYI----ERKNYI 131
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQSQ 541
H ++++ NVL+ ++ +++DFGL+ + G + APE + + +
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGCFTI 189
Query: 542 KSDVYSFGVLLLELLT-GKCP 561
KS+V+SFG+LL E++T GK P
Sbjct: 190 KSNVWSFGILLYEIVTYGKIP 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +G+G GT Y A+ + G VA++++ K + V+ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
Y +E +V EY+ GSL ++ T +D + + L F+H S
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-----YRAPELSSSDGRKQ 539
++ H +IKS N+LL G+ +++DFG P RS + APE+ + +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAY 193
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
K D++S G++ +E++ G+ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG + A D +VAVK LK+AS +++F++ E+L L+H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 422 KAYYFAREEKLLVSEYMPNGSL--FWLLHG----------NRGPGRTPLDWTTRLKIAAG 469
L+V EYM +G L F HG + PG PL L +A+
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 166
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---- 525
A G+ ++ L H ++ + N L+ + ++ DFG+S + R G
Sbjct: 167 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCP 561
+ PE S RK + +SDV+SFGV+L E+ T GK P
Sbjct: 223 PIRWMPPE--SILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +G+G GT Y A+ + G VA++++ K + V+ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
Y +E +V EY+ GSL ++ T +D + + L F+H S
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-----YRAPELSSSDGRKQ 539
++ H +IKS N+LL G+ +++DFG P RS + APE+ + +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR--KAY 193
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
K D++S G++ +E++ G+ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Query: 366 EMLGKGGFGTAYKAVLDD--GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+ +GKG FG +L D G+ VAVK +K+ + + F V+ +LRH NLV L
Sbjct: 199 QTIGKGEFG---DVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 253
Query: 424 YYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ L +V+EYM GSL L R GR+ L LK + + ++ +
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL----E 306
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQS 540
H ++ + NVL+ + A+VSDFGL+ A + T + APE +K S
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE--KKFS 364
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL E+ + G+ P
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 366 EMLGKGGFGTAYKAVLDD--GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+ +GKG FG +L D G+ VAVK +K+ + + F V+ +LRH NLV L
Sbjct: 12 QTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 66
Query: 424 YYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ L +V+EYM GSL L R GR+ L LK + + ++
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 121
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQS 540
H ++ + NVL+ + A+VSDFGL+ A + T + APE +K S
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE--KKFS 177
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL E+ + G+ P
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVP 199
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +G+G GT Y A+ + G VA++++ K + V+ ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
Y +E +V EY+ GSL ++ T +D + + L F+H S
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 136
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-----YRAPELSSSDGRKQ 539
++ H +IKS N+LL G+ +++DFG P RS + APE+ + +
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR--KAY 194
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
K D++S G++ +E++ G+ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 366 EMLGKGGFGTAYKAVLDD--GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+ +GKG FG +L D G+ VAVK +K+ + + F V+ +LRH NLV L
Sbjct: 27 QTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 81
Query: 424 YYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ L +V+EYM GSL L R GR+ L LK + + ++
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 136
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQS 540
H ++ + NVL+ + A+VSDFGL+ A + T + APE +K S
Sbjct: 137 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE--KKFS 192
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL E+ + G+ P
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVP 214
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +GKG FG +K + + V ++ D + + +Q + VL + P +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y + ++ EY+ GS LL PG PLD T I +GL ++H S
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH----S 142
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQS--- 540
K H +IK+ NVLL + G +++DFG++ + + R+ P + + KQS
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
K+D++S G+ +EL G+ P
Sbjct: 203 SKADIWSLGITAIELARGEPP 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +G+G GT Y A+ + G VA++++ K + V+ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
Y +E +V EY+ GSL ++ T +D + + L F+H S
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-----YRAPELSSSDGRKQ 539
++ H +IKS N+LL G+ +++DFG P RS + APE+ + +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR--KAY 193
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
K D++S G++ +E++ G+ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 366 EMLGKGGFGTAYKAVLDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLVG 420
+++G+G FG KA + + A+KR+K+ AS R+F +EVL +L HPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP-----------LDWTTRLKIAAG 469
L R L EY P+G+L L +R P L L AA
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---Y 526
ARG+ ++ + H ++ + N+L+ + A+++DFGLS V ++ G
Sbjct: 141 VARGMDYL----SQKQFIHRDLAARNILVGENYVAKIADFGLS-RGQEVYVKKTMGRLPV 195
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
R + S + + SDV+S+GVLL E+++
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGR 412
+ ++ED + +MLGKG FG + A A+K LK + + E M V R
Sbjct: 13 KLKIEDFI--LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM-VEKR 69
Query: 413 L-----RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA 467
+ HP L + + +E V EY+ G L + + D + A
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSRATFYA 124
Query: 468 AGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPR 522
A GL F+H S + + ++K N+LLDK G+ +++DFG+ A +
Sbjct: 125 AEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG 180
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ Y APE+ G+K + D +SFGVLL E+L G+ P
Sbjct: 181 TPDYIAPEILL--GQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 31/209 (14%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHMEV--LGRLRHPNLV 419
+ +G+G FG KA+L +DG +K + + + K E EV L ++HPN+V
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG---PGRTPLDWTTRLKIAAGAARGLAF 476
+ + +V +Y G LF ++ +G LDW ++ +A L
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKH 140
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPE 530
+H K+ H +IKS N+ L K G ++ DFG++ STV + Y +PE
Sbjct: 141 VH----DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPE 195
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ + + + KSD+++ G +L EL T K
Sbjct: 196 I--CENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VA+K +K+ S+ + EF + +V+ L H LV L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ +++EYM NG L L R +T L++ + ++ +S +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL----ESKQFL 127
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDG----RKQSQKS 543
H ++ + N L++ G +VSDFGLS + S G + P S K S KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 544 DVYSFGVLLLELLT-GKCP 561
D+++FGVL+ E+ + GK P
Sbjct: 188 DIWAFGVLMWEIYSLGKMP 206
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ F+
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKFL 150
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ + +V G + P
Sbjct: 151 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 366 EMLGKGGFGTAYKAVLDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLVG 420
+++G+G FG KA + + A+KR+K+ AS R+F +EVL +L HPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP-----------LDWTTRLKIAAG 469
L R L EY P+G+L L +R P L L AA
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG---Y 526
ARG+ ++ + H ++ + N+L+ + A+++DFGLS V ++ G
Sbjct: 151 VARGMDYL----SQKQFIHRDLAARNILVGENYVAKIADFGLS-RGQEVYVKKTMGRLPV 205
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
R + S + + SDV+S+GVLL E+++
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E LG G + T YK + G VA+K +K D+ G + + ++ L+H N+V L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFIHFTC 481
+ LV E+M N ++ +R G TP L+ +GLAF C
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYM--DSRTVGNTPRGLELNLVKYFQWQLLQGLAF----C 124
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSDG 536
K+ H ++K N+L++K G ++ DFGL+ F P S YRAP++
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG-S 183
Query: 537 RKQSQKSDVYSFGVLLLELLTGK 559
R S D++S G +L E++TGK
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGK 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +GKG FG +K + + V ++ D + + +Q + VL + P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y + ++ EY+ GS LL PG PLD T I +GL ++H S
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH----S 122
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQS--- 540
K H +IK+ NVLL + G +++DFG++ + + R+ P + + KQS
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
K+D++S G+ +EL G+ P
Sbjct: 183 SKADIWSLGITAIELARGEPP 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VA+K +K+ S+ + EF + +V+ L H LV L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ +++EYM NG L L R +T L++ + ++ +S +
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL----ESKQFL 126
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDG----RKQSQKS 543
H ++ + N L++ G +VSDFGLS + S G + P S K S KS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 544 DVYSFGVLLLELLT-GKCP 561
D+++FGVL+ E+ + GK P
Sbjct: 187 DIWAFGVLMWEIYSLGKMP 205
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +GKG FG +K + + V ++ D + + +Q + VL + P +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y + ++ EY+ GS LL PG PLD T I +GL ++H S
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH----S 137
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQS--- 540
K H +IK+ NVLL + G +++DFG++ + + R+ P + + KQS
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
K+D++S G+ +EL G+ P
Sbjct: 198 SKADIWSLGITAIELARGEPP 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 366 EMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRL-----RHPNLV 419
+MLGKG FG + A A+K LK + + E M V R+ HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM-VEKRVLSLAWEHPFLT 82
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
+ + +E V EY+ G L + + D + AA GL F+H
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLH- 136
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNGYRAPELSSS 534
S + + ++K N+LLDK G+ +++DFG+ A + + Y APE+
Sbjct: 137 ---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL- 192
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
G+K + D +SFGVLL E+L G+ P
Sbjct: 193 -GQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 32/212 (15%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIGGKREFEQHME--VLGRLRHPNLV 419
++LG+G FG + GS + A+K LK A++ + ME +L + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 420 GLKAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
L Y F E KL L+ +++ G LF L ++ T D L A LA H
Sbjct: 90 KLH-YAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL-----AELALALDH 141
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---------IFAPPSTVPRSNGYRAP 529
SL + + ++K N+LLD+ G+ +++DFGLS ++ TV Y AP
Sbjct: 142 --LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE----YMAP 195
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E+ + G QS +D +SFGVL+ E+LTG P
Sbjct: 196 EVVNRRGHTQS--ADWWSFGVLMFEMLTGTLP 225
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 311
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 312 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 368
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H N+ + N L+ + +V+DFGLS T G +
Sbjct: 369 AMEYL----EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQS 585
APE S K S KSDV++FGVLL E+ T G P +DL + +
Sbjct: 425 TAPE--SLAYNKFSIKSDVWAFGVLLWEIATYGMSP------------YPGIDLSQVYEL 470
Query: 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+ + D + R + E++ L++ AC +P RP+ + + + E +
Sbjct: 471 LEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 515
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 32/212 (15%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIGGKREFEQHME--VLGRLRHPNLV 419
++LG+G FG + GS + A+K LK A++ + ME +L + HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 420 GLKAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
L Y F E KL L+ +++ G LF L ++ T D L A LA H
Sbjct: 91 KLH-YAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL-----AELALALDH 142
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---------IFAPPSTVPRSNGYRAP 529
SL + + ++K N+LLD+ G+ +++DFGLS ++ TV Y AP
Sbjct: 143 --LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE----YMAP 196
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E+ + G QS +D +SFGVL+ E+LTG P
Sbjct: 197 EVVNRRGHTQS--ADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 32/212 (15%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIGGKREFEQHME--VLGRLRHPNLV 419
++LG+G FG + GS + A+K LK A++ + ME +L + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 420 GLKAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
L Y F E KL L+ +++ G LF L ++ T D L A LA H
Sbjct: 90 KLH-YAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL-----AELALALDH 141
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---------IFAPPSTVPRSNGYRAP 529
SL + + ++K N+LLD+ G+ +++DFGLS ++ TV Y AP
Sbjct: 142 --LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE----YMAP 195
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E+ + G QS +D +SFGVL+ E+LTG P
Sbjct: 196 EVVNRRGHTQS--ADWWSFGVLMFEMLTGTLP 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +GKG FG +K + + V ++ D + + +Q + VL + P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y + ++ EY+ GS LL PG PLD T I +GL ++H S
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH----S 122
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQS--- 540
K H +IK+ NVLL + G +++DFG++ + + R+ P + + KQS
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 541 QKSDVYSFGVLLLELLTGKCP 561
K+D++S G+ +EL G+ P
Sbjct: 183 SKADIWSLGITAIELARGEPP 203
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VA+K +K+ S+ + EF + +V+ L H LV L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ +++EYM NG L L R +T L++ + ++ +S +
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL----ESKQFL 122
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDG----RKQSQKS 543
H ++ + N L++ G +VSDFGLS + S G + P S K S KS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 544 DVYSFGVLLLELLT-GKCP 561
D+++FGVL+ E+ + GK P
Sbjct: 183 DIWAFGVLMWEIYSLGKMP 201
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VA+K +K+ S+ + EF + +V+ L H LV L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ +++EYM NG L L R +T L++ + ++ +S +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL----ESKQFL 127
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDG----RKQSQKS 543
H ++ + N L++ G +VSDFGLS + S G + P S K S KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 544 DVYSFGVLLLELLT-GKCP 561
D+++FGVL+ E+ + GK P
Sbjct: 188 DIWAFGVLMWEIYSLGKMP 206
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ F+
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKFL 147
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPP-STVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ ++ +V G + P
Sbjct: 148 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 269
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 270 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 326
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H N+ + N L+ + +V+DFGLS T G +
Sbjct: 327 AMEYL----EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQS 585
APE S K S KSDV++FGVLL E+ T G P +DL + +
Sbjct: 383 TAPE--SLAYNKFSIKSDVWAFGVLLWEIATYGMSP------------YPGIDLSQVYEL 428
Query: 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+ + D + R + E++ L++ AC +P RP+ + + + E +
Sbjct: 429 LEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 473
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ F+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKFL 149
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPP-STVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ ++ +V G + P
Sbjct: 150 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ F+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKFL 149
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 150 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VA+K +K+ S+ + EF + +V+ L H LV L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ +++EYM NG L L R +T L++ + ++ +S +
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL----ESKQFL 133
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDG----RKQSQKS 543
H ++ + N L++ G +VSDFGLS + S G + P S K S KS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 544 DVYSFGVLLLELLT-GKCP 561
D+++FGVL+ E+ + GK P
Sbjct: 194 DIWAFGVLMWEIYSLGKMP 212
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ F+
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKFL 150
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 151 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VA+K +K+ S+ + EF + +V+ L H LV L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ +++EYM NG L L R +T L++ + ++ +S +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL----ESKQFL 142
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDG----RKQSQKS 543
H ++ + N L++ G +VSDFGLS + S G + P S K S KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 544 DVYSFGVLLLELLT-GKCP 561
D+++FGVL+ E+ + GK P
Sbjct: 203 DIWAFGVLMWEIYSLGKMP 221
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ F+
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKFL 154
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPP-STVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ ++ +V G + P
Sbjct: 155 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 41/296 (13%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 272
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R + L +A +
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 329
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H N+ + N L+ + +V+DFGLS T G +
Sbjct: 330 AMEYL----EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 385
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWVQS 585
APE S K S KSDV++FGVLL E+ T G P +DL + +
Sbjct: 386 TAPE--SLAYNKFSIKSDVWAFGVLLWEIATYGMSP------------YPGIDLSQVYEL 431
Query: 586 VVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEEL 641
+ + D + R + E++ L++ AC +P RP+ + + + E +
Sbjct: 432 LEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ F+
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKFL 208
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPP-STVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ ++ +V G + P
Sbjct: 209 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 45/227 (19%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREF--EQHMEVLGRLRHPNLVGL-- 421
E++G+G +G YK LD+ V +K S ++ F E+++ + + H N+
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVA----VKVFSFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 422 ---KAYYFAREEKLLVSEYMPNGSL--FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ R E LLV EY PNGSL + LH + DW + ++A RGLA+
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--------DWVSSCRLAHSVTRGLAY 126
Query: 477 IHFTC-----KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR--------- 522
+H ++H ++ S NVL+ G +SDFGLS+ + + R
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 523 ----SNGYRAPE-----LSSSDGRKQSQKSDVYSFGVLLLELLTGKC 560
+ Y APE ++ D ++ D+Y+ G++ E+ +C
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM-RC 232
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 35/230 (15%)
Query: 347 VFFEGTKRFEL-------EDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG 399
++F+ K++E ED E LG G FG YKA + SV+A ++ D
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTK--S 74
Query: 400 KREFEQHM---EVLGRLRHPNLVGL-KAYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPG 454
+ E E +M ++L HPN+V L A+Y+ +L+ E+ G++ +L R
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELER--- 130
Query: 455 RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514
PL + + L ++H K+ H ++K+ N+L G+ +++DFG+S
Sbjct: 131 --PLTESQIQVVCKQTLDALNYLHDN----KIIHRDLKAGNILFTLDGDIKLADFGVSA- 183
Query: 515 APPSTVPRSNGY------RAPEL---SSSDGRKQSQKSDVYSFGVLLLEL 555
T+ R + + APE+ +S R K+DV+S G+ L+E+
Sbjct: 184 KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 148
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 149 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Query: 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASIGG-----KREFEQHMEVLGRLRHP 416
E++G G FG + L S VA+K LK GG +REF ++G+ HP
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEHP 77
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L+ ++++E+M NG+L L N G T +++ G RG+A
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-------FTVIQL-VGMLRGIAS 129
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNG-----Y 526
+ H ++ + N+L++ +VSDFGLS F + P+ G +
Sbjct: 130 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE + RK + SD +S+G+++ E+++
Sbjct: 190 TAPEAIAF--RKFTSASDAWSYGIVMWEVMS 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 65
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+ LL R R ++ L +A +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 123 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 179 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 70
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 128 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 184 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFA 427
LG G FG VA+K +K+ S+ + EF + +V+ L H LV L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 428 REEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLT 487
+ +++EYM NG L L R +T L++ + ++ +S +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL----ESKQFL 142
Query: 488 HGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDG----RKQSQKS 543
H ++ + N L++ G +VSDFGLS + S G + P S K S KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 544 DVYSFGVLLLELLT-GKCP 561
D+++FGVL+ E+ + GK P
Sbjct: 203 DIWAFGVLMWEIYSLGKMP 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Query: 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASIGG-----KREFEQHMEVLGRLRHP 416
E++G G FG + L S VA+K LK GG +REF ++G+ HP
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEHP 75
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L+ ++++E+M NG+L L N G T +++ G RG+A
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-------FTVIQL-VGMLRGIAS 127
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNG-----Y 526
+ H ++ + N+L++ +VSDFGLS F + P+ G +
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE + RK + SD +S+G+++ E+++
Sbjct: 188 TAPEAIAF--RKFTSASDAWSYGIVMWEVMS 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF 426
LG G FG YKA + G++ A K ++ S ++ +E+L HP +V L Y+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 427 AREEKLLVSEYMPNGSL-FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK 485
+ ++ E+ P G++ +L +RG + R + A L F+H S +
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA-----LNFLH----SKR 129
Query: 486 LTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSDGRKQS 540
+ H ++K+ NVL+ G+ R++DFG+S + R + + APE+ + K +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 541 ---QKSDVYSFGVLLLEL 555
K+D++S G+ L+E+
Sbjct: 190 PYDYKADIWSLGITLIEM 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 66
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 123
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS------IFAPPSTVPRSNGY 526
+ ++ + H ++ + N L+ + +V+DFGLS + P+ +
Sbjct: 124 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 180 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 67
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 124
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS------IFAPPSTVPRSNGY 526
+ ++ + H ++ + N L+ + +V+DFGLS + P+ +
Sbjct: 125 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 181 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 65
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 123 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 179 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVK---RLKDASIGGKR--EFEQHMEVLGRLRHPNL 418
++LG G FGT YK + + +G V + ++ + + G K EF ++ + HP+L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG--PGRTPLDWTTRLKIAAGAARGLAF 476
V L + +L V++ MP+G L +H ++ + L+W ++ A+G+ +
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 132
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----EL 531
+ + +L H ++ + NVL+ + +++DFGL+ + ++G + P L
Sbjct: 133 L----EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
RK + +SDV+S+GV + EL+T
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 70
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 128 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 184 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 69
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 126
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 127 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 183 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF 426
LG G FG YKA + G++ A K ++ S ++ +E+L HP +V L Y+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 427 AREEKLLVSEYMPNGSL-FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK 485
+ ++ E+ P G++ +L +RG + R + A L F+H S +
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA-----LNFLH----SKR 137
Query: 486 LTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSDGRKQS 540
+ H ++K+ NVL+ G+ R++DFG+S + R + + APE+ + K +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 541 ---QKSDVYSFGVLLLEL 555
K+D++S G+ L+E+
Sbjct: 198 PYDYKADIWSLGITLIEM 215
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 168
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 169 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 259
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 149
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 150 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 149
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 150 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 148
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 149 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 67
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 124
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 125 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 181 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G FG Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 63
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R + L +A +
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 120
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 121 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 177 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 167
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 168 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 67
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 124
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 125 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 181 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 70
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R ++ L +A +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 128 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 184 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 147
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 148 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 144
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 145 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 146
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 147 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
L S +K + KSDV+SFGVLL EL+T P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDD-GSVVAVKRLK-DASIGGKREFEQHMEVLG 411
R + E+L + +GKG FG YK + + VVA+K + + + + +Q + VL
Sbjct: 14 RVDPEELF-TKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLS 72
Query: 412 RLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAA 471
+ P + Y + ++ EY+ GS LL PG PL+ T I
Sbjct: 73 QCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK----PG--PLEETYIATILREIL 126
Query: 472 RGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPEL 531
+GL ++H S + H +IK+ NVLL + G+ +++DFG++ + + R+ P
Sbjct: 127 KGLDYLH----SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFW 182
Query: 532 SSSDGRKQSQ---KSDVYSFGVLLLELLTGKCPS 562
+ + KQS K+D++S G+ +EL G+ P+
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN 216
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVK---RLKDASIGGKR--EFEQHMEVLGRLRHPNL 418
++LG G FGT YK + + +G V + ++ + + G K EF ++ + HP+L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG--PGRTPLDWTTRLKIAAGAARGLAF 476
V L + +L V++ MP+G L +H ++ + L+W ++ A+G+ +
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 155
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----EL 531
+ + +L H ++ + NVL+ + +++DFGL+ + ++G + P L
Sbjct: 156 L----EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
RK + +SDV+S+GV + EL+T
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 366 EMLGKGGFGTAYKAVL--DDGSVV--AVKRL-KDASIGGKREFEQHMEVLGRLRHPNLVG 420
E++G+G FG Y L +DG + AVK L + IG +F ++ HPN++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 421 LKAYYFARE-EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFI 477
L E L+V YM +G L + R P T + I G A+G+ ++
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP---TVKDLIGFGLQVAKGMKYL 141
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP----E 530
S K H ++ + N +LD+ +V+DFGL+ +V G + P
Sbjct: 142 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
L S +K + KSDV+SFGVLL EL+T P D
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 232
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGR 412
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
P +VG +++ E + E+M GSL +L + GR P ++ IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP 529
GL ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +P
Sbjct: 116 GLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E G S +SD++S G+ L+E+ G+ P
Sbjct: 173 E--RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGR 412
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
P +VG +++ E + E+M GSL +L + GR P ++ IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP 529
GL ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +P
Sbjct: 116 GLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E G S +SD++S G+ L+E+ G+ P
Sbjct: 173 E--RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGR 412
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
P +VG +++ E + E+M GSL +L + GR P ++ IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP 529
GL ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +P
Sbjct: 116 GLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E G S +SD++S G+ L+E+ G+ P
Sbjct: 173 E--RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGR 412
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
P +VG +++ E + E+M GSL +L + GR P ++ IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP 529
GL ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +P
Sbjct: 116 GLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E G S +SD++S G+ L+E+ G+ P
Sbjct: 173 E--RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGR 412
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
P +VG +++ E + E+M GSL +L + GR P ++ IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAP 529
GL ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +P
Sbjct: 116 GLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E G S +SD++S G+ L+E+ G+ P
Sbjct: 173 E--RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 366 EMLGKGGFGTAYKAVLDD--GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+ +GKG FG +L D G+ VAVK +K+ + + F V+ +LRH NLV L
Sbjct: 18 QTIGKGEFG---DVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 72
Query: 424 YYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ L +V+EYM GSL L R GR+ L LK + + ++
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 127
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--TVPRSNGYRAPELSSSDGRKQS 540
H ++ + NVL+ + A+VSDFGL+ A + T + APE S
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAF--S 183
Query: 541 QKSDVYSFGVLLLELLT-GKCP 561
KSDV+SFG+LL E+ + G+ P
Sbjct: 184 TKSDVWSFGILLWEIYSFGRVP 205
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L VA+K LK + +R+F ++G+ HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ ++++E+M NGSL L N G T +++ G RG+A
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-------FTVIQL-VGMLRGIAAGMKY 150
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNG-----YRAPE 530
+ H ++ + N+L++ +VSDFGLS F + P+ G + APE
Sbjct: 151 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ RK + SDV+S+G+++ E+++
Sbjct: 211 --AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 65
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R + L +A +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 123 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 179 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 354 RFELED--LLRASAEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQHME-- 408
++ L+D +LR LG G FG + +G A+K LK + ++ E +
Sbjct: 2 KYSLQDFQILRT----LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER 57
Query: 409 -VLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLH-GNRGPGRTPLDWTTRLKI 466
+L + HP ++ + + ++ ++ +Y+ G LF LL R P +
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY------ 111
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR--SN 524
AA L ++H S + + ++K N+LLDK G+ +++DFG + + P T +
Sbjct: 112 AAEVCLALEYLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTP 167
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y APE+ S+ + ++ D +SFG+L+ E+L G P
Sbjct: 168 DYIAPEVVST--KPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRL---KDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ +GKG +G + G VAVK ++AS RE E + VL +RH N++G
Sbjct: 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWF--RETEIYQTVL--MRHENILGF 96
Query: 422 KAYYF----AREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
A + + L+++Y NGSL+ L T LD + LK+A + GL +
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHL 150
Query: 478 HFTCKSLK----LTHGNIKSTNVLLDKTGNARVSDFGLSIF---------APPSTVPRSN 524
H S + + H ++KS N+L+ K G ++D GL++ PP+T +
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 525 GYRAPE-LSSSDGRKQSQK---SDVYSFGVLLLEL 555
Y PE L S R Q +D+YSFG++L E+
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 70
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R + L +A +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 128 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 184 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 70
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L ++ E+M G+L L R R ++ L +A +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 128 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 184 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 368 LGKGGFGTAYKAVLD-----DGSVVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG D G +VAVK LK D + ++Q +++L L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 422 KAYYFAREEK--LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K + EK LV EY+P GSL L R + L A G+A++H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLH- 134
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNG-----YRAPEL 531
S H N+ + NVLLD ++ DFGL+ P R +G + APE
Sbjct: 135 ---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
K SDV+SFGV L ELLT
Sbjct: 192 LKE--YKFYYASDVWSFGVTLYELLT 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 65
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R + L +A +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 123 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 179 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 356 ELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRL 413
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
P +VG +++ E + E+M GSL +L + GR P ++ IA +G
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKG 178
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAPE 530
L ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +PE
Sbjct: 179 LTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 235
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G S +SD++S G+ L+E+ G+ P
Sbjct: 236 --RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 63
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L +++E+M G+L L R R + L +A +
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 120
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 121 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKW 176
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 177 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 347 VFFEGTKRFEL-------EDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG 399
++F+ K++E ED E LG G FG YKA + SV+A ++ D
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTK--S 74
Query: 400 KREFEQHM---EVLGRLRHPNLVGL-KAYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPG 454
+ E E +M ++L HPN+V L A+Y+ +L+ E+ G++ +L R
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELER--- 130
Query: 455 RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514
PL + + L ++H K+ H ++K+ N+L G+ +++DFG+S
Sbjct: 131 --PLTESQIQVVCKQTLDALNYLHDN----KIIHRDLKAGNILFTLDGDIKLADFGVSA- 183
Query: 515 APPSTVPRSNGY------RAPEL---SSSDGRKQSQKSDVYSFGVLLLEL 555
+ R + + APE+ +S R K+DV+S G+ L+E+
Sbjct: 184 KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 356 ELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRL 413
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
P +VG +++ E + E+M GSL +L + GR P ++ IA +G
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKG 135
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAPE 530
L ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +PE
Sbjct: 136 LTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 192
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G S +SD++S G+ L+E+ G+ P
Sbjct: 193 --RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 347 VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRL--KDASIGGKREF 403
++F+ +++E + ++G+G +G K D G +VA+K+ D K+
Sbjct: 19 LYFQSMEKYE-------NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA 71
Query: 404 EQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
+ +++L +LRH NLV L ++ LV E++ + L L G LD+
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVV 126
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTV-- 520
K G+ F C S + H +IK N+L+ ++G ++ DFG + A P V
Sbjct: 127 QKYLFQIINGIGF----CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182
Query: 521 --PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPEL D K + DV++ G L+ E+ G+
Sbjct: 183 DEVATRWYRAPELLVGD-VKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLK-DASIGGKREFE-QHMEVLGRLRHPNLVGLKA 423
E +G+G +G YKA G +VA+KR++ DA G + + +L L HPN+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA-AGAARGLAFIHFTCK 482
+ LV E+M L +L N +T L +++KI RG+A C
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDEN----KTGLQ-DSQIKIYLYQLLRGVAH----CH 136
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPP----STVPRSNGYRAPELSSSDGR 537
++ H ++K N+L++ G +++DFGL+ F P + + YRAP++ +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG-SK 195
Query: 538 KQSQKSDVYSFGVLLLELLTGK--CPSVID 565
K S D++S G + E++TGK P V D
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 66
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L ++ E+M G+L L R R ++ L +A +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 123
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 124 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 180 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLK-DASIGGKREFE-QHMEVLGRLRHPNLVGLKA 423
E +G+G +G YKA G +VA+KR++ DA G + + +L L HPN+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA-AGAARGLAFIHFTCK 482
+ LV E+M L +L N +T L +++KI RG+A C
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDEN----KTGLQ-DSQIKIYLYQLLRGVAH----CH 136
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPP----STVPRSNGYRAPELSSSDGR 537
++ H ++K N+L++ G +++DFGL+ F P + + YRAP++ +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG-SK 195
Query: 538 KQSQKSDVYSFGVLLLELLTGK--CPSVID 565
K S D++S G + E++TGK P V D
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 356 ELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRL 413
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
P +VG +++ E + E+M GSL +L + GR P ++ IA +G
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKG 143
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAPE 530
L ++ + K+ H ++K +N+L++ G ++ DFG+S I + ++ + Y +PE
Sbjct: 144 LTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 200
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G S +SD++S G+ L+E+ G+ P
Sbjct: 201 --RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRH 415
EDL+ E +G+G FG + L D ++VAVK ++ K +F Q +L + H
Sbjct: 114 EDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH 171
Query: 416 PNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLA 475
PN+V L ++ +V E + G L R T L++ AA G+
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGME 227
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYR-------A 528
++ C H ++ + N L+ + ++SDFG+S S G R A
Sbjct: 228 YLESKC----CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTA 283
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLE 554
PE + + GR S+ SDV+SFG+LL E
Sbjct: 284 PE-ALNYGRYSSE-SDVWSFGILLWE 307
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRH 415
EDL+ E +G+G FG + L D ++VAVK ++ K +F Q +L + H
Sbjct: 114 EDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH 171
Query: 416 PNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLA 475
PN+V L ++ +V E + G L R T L++ AA G+
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGME 227
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYR-------A 528
++ C H ++ + N L+ + ++SDFG+S S G R A
Sbjct: 228 YLESKC----CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTA 283
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLE 554
PE + + GR S+ SDV+SFG+LL E
Sbjct: 284 PE-ALNYGRYSSE-SDVWSFGILLWE 307
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 33/231 (14%)
Query: 342 ERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSV----VAVKRLKDAS 396
E+ + V K EL L ++LG G FGT +K V + +G V +K ++D S
Sbjct: 18 EKANKVLARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS 72
Query: 397 IGGKREFE---QHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGP 453
G++ F+ HM +G L H ++V L +L V++Y+P GSL + +RG
Sbjct: 73 --GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGA 129
Query: 454 --GRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511
+ L+W ++ A+G+ ++ + + H N+ + NVLL +V+DFG+
Sbjct: 130 LGPQLLLNWGVQI------AKGMYYL----EEHGMVHRNLAARNVLLKSPSQVQVADFGV 179
Query: 512 SIFAPPST-----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ PP + L S K + +SDV+S+GV + EL+T
Sbjct: 180 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 347 VFFEGTKRFEL-------EDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGG 399
++F+ K++E ED E LG G FG YKA + SV+A ++ D
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTK--S 74
Query: 400 KREFEQHM---EVLGRLRHPNLVGL-KAYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPG 454
+ E E +M ++L HPN+V L A+Y+ +L+ E+ G++ +L R
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELER--- 130
Query: 455 RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF 514
PL + + L ++H K+ H ++K+ N+L G+ +++DFG+S
Sbjct: 131 --PLTESQIQVVCKQTLDALNYLHDN----KIIHRDLKAGNILFTLDGDIKLADFGVSA- 183
Query: 515 APPSTVPRSNGY------RAPEL---SSSDGRKQSQKSDVYSFGVLLLEL 555
+ R + + APE+ +S R K+DV+S G+ L+E+
Sbjct: 184 KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFE-QHMEVLGR---- 412
E ++ S ++GKG FG Y D A R++ A R E Q +E R
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQ---AQNRIQCAIKSLSRITEMQQVEAFLREGLL 75
Query: 413 ---LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGN-----RGPGRTPLDWTTRL 464
L HPN++ L +L E +P+ L ++ HG+ R P R P T +
Sbjct: 76 MRGLNHPNVLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP---TVKD 125
Query: 465 KIAAG--AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPST 519
I+ G ARG+ ++ K H ++ + N +LD++ +V+DFGL+ + +
Sbjct: 126 LISFGLQVARGMEYL----AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181
Query: 520 VPRSNGYRAP----ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
V + R P L S + + KSDV+SFGVLL ELLT P
Sbjct: 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L VA+K LK + +R+F ++G+ HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ ++++E+M NGSL L N G T +++ G RG+A
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-------FTVIQL-VGMLRGIAAGMKY 124
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNG-----YRAPE 530
+ H + + N+L++ +VSDFGLS F + P+ G + APE
Sbjct: 125 LADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ RK + SDV+S+G+++ E+++
Sbjct: 185 --AIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLK-DASIGGKREFEQHMEVLGRL 413
+EL++++ + A + + + K VA+KR+ + E + ++ + +
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEIQAMSQC 70
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP---LDWTTRLKIAAGA 470
HPN+V + ++E LV + + GS+ ++ G LD +T I
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-APPSTVPRSN----- 524
GL ++H + H ++K+ N+LL + G+ +++DFG+S F A + R+
Sbjct: 131 LEGLEYLHKNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ APE+ R K+D++SFG+ +EL TG P
Sbjct: 187 VGTPCWMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 368 LGKGGFGTAYKAVLD-----DGSVVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG D G +VAVK LK D + ++Q +++L L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 422 KAYYFAREEK--LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K + EK LV EY+P GSL L R + L A G+A++H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLH- 134
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNG-----YRAPEL 531
+ H N+ + NVLLD ++ DFGL+ P R +G + APE
Sbjct: 135 ---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
K SDV+SFGV L ELLT
Sbjct: 192 LKE--YKFYYASDVWSFGVTLYELLT 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 366 EMLGK-GGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGL 421
E++G+ G FG YKA + SV+A ++ D + E E +M ++L HPN+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKL 72
Query: 422 -KAYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
A+Y+ +L+ E+ G++ +L R PL + + L ++H
Sbjct: 73 LDAFYYENNLWILI-EFCAGGAVDAVMLELER-----PLTESQIQVVCKQTLDALNYLHD 126
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGY------RAPEL-- 531
K+ H ++K+ N+L G+ +++DFG+S + + R + + APE+
Sbjct: 127 N----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 532 -SSSDGRKQSQKSDVYSFGVLLLEL 555
+S R K+DV+S G+ L+E+
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 65
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L ++ E+M G+L L R R + L +A +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 123 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 179 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLK-DASIGGKREFEQHMEVLGRL 413
+EL++++ + A + + + K VA+KR+ + E + ++ + +
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEIQAMSQC 65
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP---LDWTTRLKIAAGA 470
HPN+V + ++E LV + + GS+ ++ G LD +T I
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-APPSTVPRSN----- 524
GL ++H + H ++K+ N+LL + G+ +++DFG+S F A + R+
Sbjct: 126 LEGLEYLHKNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ APE+ R K+D++SFG+ +EL TG P
Sbjct: 182 VGTPCWMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 63
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L ++ E+M G+L L R R + L +A +
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 120
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 121 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 177 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGR 412
++E+E LG G +G Y+ V S+ VAVK LK+ ++ + EF + V+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKE 65
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
++HPNLV L ++ E+M G+L L R R + L +A +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------Y 526
+ ++ + H ++ + N L+ + +V+DFGLS T G +
Sbjct: 123 AMEYL----EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
APE S K S KSDV++FGVLL E+ T
Sbjct: 179 TAPE--SLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 356 ELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRL 413
EL+D LG G G +K +V ++L I + + + ++VL
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
P +VG +++ E + E+M GSL +L + GR P ++ IA +G
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKG 119
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAPE 530
L ++ + K+ H ++K +N+L++ G ++ DFG+S I + + Y +PE
Sbjct: 120 LTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPE 176
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G S +SD++S G+ L+E+ G+ P
Sbjct: 177 --RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 28/207 (13%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSV----VAVKRLKDASIGGKREFE---QHMEVLGRLRHPN 417
++LG G FGT +K V + +G V +K ++D S G++ F+ HM +G L H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 76
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGP--GRTPLDWTTRLKIAAGAARGLA 475
+V L +L V++Y+P GSL + +RG + L+W ++ A+G+
Sbjct: 77 IVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 129
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST-----VPRSNGYRAPE 530
++ + + H N+ + NVLL +V+DFG++ PP +
Sbjct: 130 YL----EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLT 557
L S K + +SDV+S+GV + EL+T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 103/236 (43%), Gaps = 43/236 (18%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQH 406
G + FEL ++LG G +G + D G + A+K LK A+I K + +H
Sbjct: 52 GIENFEL-------LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH 104
Query: 407 M----EVLGRLRH-PNLVGLKAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDW 460
+VL +R P LV L Y F E KL L+ +Y+ G LF T L
Sbjct: 105 TRTERQVLEHIRQSPFLVTLH-YAFQTETKLHLILDYINGGELF-----------THLSQ 152
Query: 461 TTR-----LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515
R ++I G LA H L + + +IK N+LLD G+ ++DFGLS
Sbjct: 153 RERFTEHEVQIYVGEIV-LALEHL--HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209
Query: 516 PPSTVPRSNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
R+ Y AP++ + D +S GVL+ ELLTG P +D
Sbjct: 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRH 415
+D R S LG G G K ++ ++L I + + + ++VL
Sbjct: 16 DDFERISE--LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS 73
Query: 416 PNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLA 475
P +VG +++ E + E+M GSL +L + R P + ++ IA RGLA
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAV--LRGLA 128
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPPSTVPRSNGYRAPELS 532
++ + ++ H ++K +N+L++ G ++ DFG+S I + ++ + Y APE
Sbjct: 129 YLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPE-- 183
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G S +SD++S G+ L+EL G+ P
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGS----VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNL 418
++LG G FGT YK + + DG VA+K L++ S +E V+ + P +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGP--GRTPLDWTTRLKIAAGAARGLAF 476
L +L V++ MP G L + NRG + L+W ++ A+G+++
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----EL 531
+ + ++L H ++ + NVL+ + +++DFGL+ + T ++G + P L
Sbjct: 135 L----EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
S R+ + +SDV+S+GV + EL+T
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG KA + VAVK LK+ AS R+ VL ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--GPG-----------------RTPLDWT 461
L LL+ EY GSL L +R GPG L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPST 519
+ A ++G+ ++ +KL H ++ + N+L+ + ++SDFGLS ++ S
Sbjct: 151 DLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 520 VPRSNGYRAP----ELSSSDGRKQSQKSDVYSFGVLLLELLT 557
V RS G R P + S + +SDV+SFGVLL E++T
Sbjct: 207 VKRSQG-RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVV-AVKRLKDASIGGKREFEQHME-----VLGRLRHPNLV 419
+++GKG FG A V AVK L+ +I K+E E+H+ +L ++HP LV
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE-EKHIMSERNVLLKNVKHPFLV 102
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
GL + ++ V +Y+ G LF+ L R L+ R AA A L ++H
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEPRARF-YAAEIASALGYLH- 156
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-----SIFAPPSTVPRSNGYRAPELSSS 534
SL + + ++K N+LLD G+ ++DFGL + ST + Y APE+
Sbjct: 157 ---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + D + G +L E+L G P
Sbjct: 214 --QPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 43/279 (15%)
Query: 366 EMLGKGGFGTAYKAVL------DDGSVVAVKRLKDASIGGKREFEQHMEVL-GRLRHPNL 418
E LG+ FG YK L + VA+K LKD + G RE +H +L RL+HPN+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGP----GRTPLDWTTR--------LKI 466
V L + ++ Y +G L L R P G T D T + + +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFL-VMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL--SIFAPPSTVPRSN 524
A A G+ ++ S + H ++ + NVL+ N ++SD GL ++A N
Sbjct: 151 VAQIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCP-------SVIDXXXXXX 571
+ APE K S SD++S+GV+L E+ + G P V++
Sbjct: 207 SLLPIRWMAPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 264
Query: 572 XXXXXVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEM 610
D P WV +++ E W F R+KDI +
Sbjct: 265 VLPCPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 301
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 365 AEMLGKGGFGTAYKAVLD-DGSVVAVK---RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LG G FG + G VAVK R K S+ + + ++ L RHP+++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + +V EY+ G LF + N GR LD ++ G+ +
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKN---GR--LDEKESRRLFQQILSGVDY---- 131
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDG 536
C + H ++K NVLLD NA+++DFGLS R S Y APE+ S G
Sbjct: 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS--G 189
Query: 537 RKQS-QKSDVYSFGVLLLELLTGKCP 561
R + + D++S GV+L LL G P
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG KA + VAVK LK+ AS R+ VL ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--GPG-----------------RTPLDWT 461
L LL+ EY GSL L +R GPG L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPST 519
+ A ++G+ ++ +KL H ++ + N+L+ + ++SDFGLS ++ S
Sbjct: 151 DLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 520 VPRSNGYRAP----ELSSSDGRKQSQKSDVYSFGVLLLELLT 557
V RS G R P + S + +SDV+SFGVLL E++T
Sbjct: 207 VKRSQG-RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 387 VAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFW 445
VA+K LK + +R+F ++G+ HPN++ L+ ++V+EYM NGSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 446 LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505
L + G T +++ G RG+ L H ++ + NVL+D +
Sbjct: 140 FLRTHDGQ-------FTIMQL-VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCK 191
Query: 506 VSDFGLS--IFAPPSTVPRSNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
VSDFGLS + P + G + APE + R S SDV+SFGV++ E+L
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLA 249
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Query: 386 VVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL--KAYYFAREEKLLVSEYMPNGSL 443
VV V +++D S R+F + L HPN++ + L++ +MP GSL
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL 96
Query: 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN 503
+ +LH +D + +K A ARG+AF+H T + L H + S +V++D+
Sbjct: 97 YNVLHEGTN---FVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHA-LNSRSVMIDEDMT 151
Query: 504 ARVS--DFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQSQKS-DVYSFGVLLLELLTGKC 560
AR+S D S +P + + APE +++S D++SF VLL EL+T +
Sbjct: 152 ARISMADVKFSFQSPGRMY--APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV 209
Query: 561 P 561
P
Sbjct: 210 P 210
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+EYM NGSL L + D + G RG+A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 162
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGLS + P + G + P +S +
Sbjct: 163 LSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 387 VAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFW 445
VA+K LK + +R+F ++G+ HPN++ L+ ++V+EYM NGSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 446 LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505
L + G T +++ G RG+ L H ++ + NVL+D +
Sbjct: 140 FLRTHDGQ-------FTIMQL-VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCK 191
Query: 506 VSDFGLSIFA---PPSTVPRSNG-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
VSDFGLS P + + G + APE + R S SDV+SFGV++ E+L
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLA 249
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 387 VAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFW 445
VA+K LK + +R+F ++G+ HPN++ L+ + ++V+EYM NGSL
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 446 LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505
L N G T +++ G RG++ + H ++ + N+L++ +
Sbjct: 113 FLKKNDGQ-------FTVIQL-VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCK 164
Query: 506 VSDFGLS--IFAPPSTVPRSNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
VSDFGLS + P + G + APE + RK + SDV+S+G+++ E+++
Sbjct: 165 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF--RKFTSASDVWSYGIVMWEVVS 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L VA+K LK + +R+F ++G+ HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA--AGAARGLAFIH 478
L+ + ++++EYM NGSL L N G R + G RG+
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----------RFTVIQLVGMLRGIGSGM 144
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG------YRAPE 530
+ H ++ + N+L++ +VSDFG+S + P + G + APE
Sbjct: 145 KYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ RK + SDV+S+G+++ E+++
Sbjct: 205 AIAY--RKFTSASDVWSYGIVMWEVMS 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 43/279 (15%)
Query: 366 EMLGKGGFGTAYKAVL------DDGSVVAVKRLKDASIGGKREFEQHMEVL-GRLRHPNL 418
E LG+ FG YK L + VA+K LKD + G RE +H +L RL+HPN+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGP----GRTPLDWTTR--------LKI 466
V L + ++ Y +G L L R P G T D T + + +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFL-VMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL--SIFAPPSTVPRSN 524
A A G+ ++ S + H ++ + NVL+ N ++SD GL ++A N
Sbjct: 134 VAQIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCP-------SVIDXXXXXX 571
+ APE K S SD++S+GV+L E+ + G P V++
Sbjct: 190 SLLPIRWMAPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 247
Query: 572 XXXXXVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEM 610
D P WV +++ E W F R+KDI +
Sbjct: 248 VLPCPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 284
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDASIGG-KREFEQHMEVLGRLRHPNLVG 420
+++G G FG L VA+K LK +R+F ++G+ HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA--AGAARGLAFIH 478
L+ + ++++EYM NGSL L N G R + G RG+
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----------RFTVIQLVGMLRGIGSGM 123
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG------YRAPE 530
+ H ++ + N+L++ +VSDFG+S + P + G + APE
Sbjct: 124 KYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ RK + SDV+S+G+++ E+++
Sbjct: 184 AIAY--RKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 366 EMLGKGGFGTAYKAVLD----DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L VA+K LK + +R+F ++G+ HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA--AGAARGLAFIH 478
L+ + ++++EYM NGSL L N G R + G RG+
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----------RFTVIQLVGMLRGIGSGM 129
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG------YRAPE 530
+ H ++ + N+L++ +VSDFG+S + P + G + APE
Sbjct: 130 KYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ RK + SDV+S+G+++ E+++
Sbjct: 190 AIAY--RKFTSASDVWSYGIVMWEVMS 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGK-REFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG +G ++ G VAVK RE E + V+ LRH N++G A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIAS 70
Query: 425 ----YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF- 479
+ + L++ Y GSL+ L T LD + L+I A GLA +H
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 480 ---TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST-------VPR--SNGYR 527
T + H ++KS N+L+ K G ++D GL++ ST PR + Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 528 APELSSS----DGRKQSQKSDVYSFGVLLLEL 555
APE+ D ++ D+++FG++L E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 21/228 (9%)
Query: 341 YERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA- 395
YE + E K + ++ + +++G G FG L S VA+K LK
Sbjct: 26 YEDPTQTVHEFAKELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 83
Query: 396 SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR 455
+ +R+F ++G+ HPN++ L+ + ++V+EYM NGSL L +
Sbjct: 84 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH----- 138
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--I 513
D + G RG+A + H ++ + N+L++ +VSDFGLS +
Sbjct: 139 ---DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 195
Query: 514 FAPPSTVPRSNGYRAP-ELSSSDG---RKQSQKSDVYSFGVLLLELLT 557
P + G + P +S + RK + SDV+S+G++L E+++
Sbjct: 196 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGK-REFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG +G ++ G VAVK RE E + V+ LRH N++G A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIAS 99
Query: 425 ----YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF- 479
+ + L++ Y GSL+ L T LD + L+I A GLA +H
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 480 ---TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST-------VPR--SNGYR 527
T + H ++KS N+L+ K G ++D GL++ ST PR + Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 528 APELSSS----DGRKQSQKSDVYSFGVLLLEL 555
APE+ D ++ D+++FG++L E+
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGK-REFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG +G ++ G VAVK RE E + V+ LRH N++G A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIAS 70
Query: 425 ----YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF- 479
+ + L++ Y GSL+ L T LD + L+I A GLA +H
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 480 ---TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST-------VPR--SNGYR 527
T + H ++KS N+L+ K G ++D GL++ ST PR + Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 528 APELSSS----DGRKQSQKSDVYSFGVLLLEL 555
APE+ D ++ D+++FG++L E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 21/228 (9%)
Query: 341 YERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA- 395
YE + E K + ++ + +++G G FG L S VA+K LK
Sbjct: 28 YEDPTQTVHEFAKELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 396 SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR 455
+ +R+F ++G+ HPN++ L+ + ++V+EYM NGSL L +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH----- 140
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--I 513
D + G RG+A + H ++ + N+L++ +VSDFGLS +
Sbjct: 141 ---DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 514 FAPPSTVPRSNGYRAP-ELSSSDG---RKQSQKSDVYSFGVLLLELLT 557
P + G + P +S + RK + SDV+S+G++L E+++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+EYM NGSL L + D + G RG+A
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 133
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGLS + P + G + P +S +
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+EYM NGSL L + D + G RG+A
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 150
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGLS + P + G + P +S +
Sbjct: 151 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 21/228 (9%)
Query: 341 YERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA- 395
YE + E K + ++ + +++G G FG L S VA+K LK
Sbjct: 28 YEDPTQTVHEFAKELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 396 SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR 455
+ +R+F ++G+ HPN++ L+ + ++V+EYM NGSL L +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH----- 140
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--I 513
D + G RG+A + H ++ + N+L++ +VSDFGLS +
Sbjct: 141 ---DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 514 FAPPSTVPRSNGYRAP-ELSSSDG---RKQSQKSDVYSFGVLLLELLT 557
P + G + P +S + RK + SDV+S+G++L E+++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+EYM NGSL L + D + G RG+A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 162
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGLS + P + G + P +S +
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+EYM NGSL L + D + G RG+A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 162
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGLS + P + G + P +S +
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 355 FELEDLLRASAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFE---QHMEVL 410
F+ ++LRA +GKG FG +D + A+K + + E + ++++
Sbjct: 14 FDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 411 GRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGA 470
L HP LV L + E+ +V + + G L + L N T +L I
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE----TVKLFICE-L 124
Query: 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP----STVPRSNGY 526
L ++ ++ ++ H ++K N+LLD+ G+ ++DF ++ P +T+ + Y
Sbjct: 125 VMALDYL----QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPY 180
Query: 527 RAPEL-SSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVI 564
APE+ SS G S D +S GV ELL G+ P I
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 361 LRASAE------MLGKGGFGTA----YKAVLDDGSVVAVKRLKDASIGGKRE---FEQHM 407
LR AE ++G+G FG +K+ V A+K L + + + F +
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 408 EVLGRLRHPNLVGLKAYYFAREEKLL--VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
+++ P +V L +Y ++++ L V EYMP G L L+ P + +T +
Sbjct: 121 DIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 178
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN- 524
+A A + FIH ++K N+LLDK+G+ +++DFG + + R +
Sbjct: 179 LALDAIHSMGFIH----------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 525 -----GYRAPELSSSDGRK--QSQKSDVYSFGVLLLELLTGKCPSVID 565
Y +PE+ S G ++ D +S GV L E+L G P D
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 361 LRASAE------MLGKGGFGTA----YKAVLDDGSVVAVKRLKDASIGGKRE---FEQHM 407
LR AE ++G+G FG +K+ V A+K L + + + F +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 408 EVLGRLRHPNLVGLKAYYFAREEKLL--VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
+++ P +V L +Y ++++ L V EYMP G L L+ P + +T +
Sbjct: 126 DIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN- 524
+A A + FIH ++K N+LLDK+G+ +++DFG + + R +
Sbjct: 184 LALDAIHSMGFIH----------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 525 -----GYRAPELSSSDGRK--QSQKSDVYSFGVLLLELLTGKCPSVID 565
Y +PE+ S G ++ D +S GV L E+L G P D
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E++G GGFG +KA DG +KR+K + +RE ++ L +L H N+V
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 72
Query: 425 Y---------------FAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAA 468
+ ++ + L + E+ G+L + RG LD L++
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE---KLDKVLALELFE 129
Query: 469 GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-SIFAPPSTVPRSNG-- 525
+G+ +IH S KL + ++K +N+ L T ++ DFGL + RS G
Sbjct: 130 QITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 526 -YRAPE-LSSSDGRKQSQKSDVYSFGVLLLELL 556
Y +PE +SS D K+ D+Y+ G++L ELL
Sbjct: 186 RYMSPEQISSQDYGKE---VDLYALGLILAELL 215
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 361 LRASAE------MLGKGGFGTA----YKAVLDDGSVVAVKRLKDASIGGKRE---FEQHM 407
LR AE ++G+G FG +K+ V A+K L + + + F +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 408 EVLGRLRHPNLVGLKAYYFAREEKLL--VSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
+++ P +V L +Y ++++ L V EYMP G L L+ P + +T +
Sbjct: 126 DIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN- 524
+A A + FIH ++K N+LLDK+G+ +++DFG + + R +
Sbjct: 184 LALDAIHSMGFIH----------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 525 -----GYRAPELSSSDGRK--QSQKSDVYSFGVLLLELLTGKCPSVID 565
Y +PE+ S G ++ D +S GV L E+L G P D
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 37/222 (16%)
Query: 368 LGKGGFGTAYKAVL------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG KA + VAVK LK+ AS R+ VL ++ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--GPG-----------------RTPLDWT 461
L LL+ EY GSL L +R GPG L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPST 519
+ A ++G+ ++ + L H ++ + N+L+ + ++SDFGLS ++ S
Sbjct: 151 DLISFAWQISQGMQYL----AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 520 VPRSNGYRAP----ELSSSDGRKQSQKSDVYSFGVLLLELLT 557
V RS G R P + S + +SDV+SFGVLL E++T
Sbjct: 207 VKRSQG-RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 367 MLGKGGFGTAYKAVLD----DGSVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVGL 421
++G G FG L VA+K LK + +R+F ++G+ HPN+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + ++V E+M NG+L L + G T +++ G RG+A
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-------FTVIQL-VGMLRGIAAGMRYL 161
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG------YRAPELSS 533
+ H ++ + N+L++ +VSDFGLS I P V + G + APE +
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE--A 219
Query: 534 SDGRKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G+++ E+++
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+EYM NGSL L + D + G RG+A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 162
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGL+ + P + G + P +S +
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 367 MLGKGGFGTAYKAVLDD---GSVVAVKRLKDASIGGKREFE---QHMEVLGRLRHPNLVG 420
+LGKG FG + D G AVK + + K + E + +++L +L HPN++
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L ++ + LV E G LF + R +I G+ ++H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 481 CKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSI-FAPPSTVPRSNG---YRAPELSS 533
K+ H ++K N+LL+ K N R+ DFGLS F + G Y APE+
Sbjct: 146 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 201
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP-----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G CP + D +LP+W
Sbjct: 202 G---TYDEKCDVWSTGVILYILLSG-CPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 367 MLGKGGFGTAYKAVLDD---GSVVAVKRLKDASIGGKREFE---QHMEVLGRLRHPNLVG 420
+LGKG FG + D G AVK + + K + E + +++L +L HPN++
Sbjct: 39 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L ++ + LV E G LF + R +I G+ ++H
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 481 CKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSI-FAPPSTVPRSNG---YRAPELSS 533
K+ H ++K N+LL+ K N R+ DFGLS F + G Y APE+
Sbjct: 152 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 207
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP-----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G CP + D +LP+W
Sbjct: 208 GT---YDEKCDVWSTGVILYILLSG-CPPFNGANEYDILKKVEKGKYTFELPQW 257
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH---PNLVGLKA 423
+G+G +G+ K V G ++AVKR++ +++ K + + M++ +R P +V
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 424 YYFAREEKLLVSEYMPNG-SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
F + + E M F+ + P + ++ +A A ++ +
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA-----LNHLKE 143
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG----YRAPELSSSDGRK 538
+LK+ H +IK +N+LLD++GN ++ DFG+S S + Y APE +
Sbjct: 144 NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 539 QSQ--KSDVYSFGVLLLELLTGKCP 561
Q +SDV+S G+ L EL TG+ P
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 368 LGKGGFGTAYKAVLD-----DGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHPNLVGL 421
LG+G FG D G +VAVK LK+ R +++ +E+L L H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 422 KAYYFAREEK--LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K + EK LV EY+P GSL L R + L A G+A++H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLH- 129
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNG-----YRAPEL 531
+ H + + NVLLD ++ DFGL+ P R +G + APE
Sbjct: 130 ---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
K SDV+SFGV L ELLT
Sbjct: 187 LKEC--KFYYASDVWSFGVTLYELLT 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 49/226 (21%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E++G GGFG +KA DG ++R+K + +RE ++ L +L H N+V
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 73
Query: 425 YFA-------REEKLLVSEYMP----------------------NGSLFWLLHGNRGPGR 455
+ ++ L S+Y P G+L + RG
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-- 131
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-SIF 514
LD L++ +G+ +IH S KL H ++K +N+ L T ++ DFGL +
Sbjct: 132 -KLDKVLALELFEQITKGVDYIH----SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 515 APPSTVPRSNG---YRAPE-LSSSDGRKQSQKSDVYSFGVLLLELL 556
RS G Y +PE +SS D K+ D+Y+ G++L ELL
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKE---VDLYALGLILAELL 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 368 LGKGGFGTAYKAVLD-----DGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHPNLVGL 421
LG+G FG D G +VAVK LK+ R +++ +E+L L H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 422 KAYYFAREEK--LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K + EK LV EY+P GSL L R + L A G+A++H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLH- 128
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS---TVPRSNG-----YRAPEL 531
+ H + + NVLLD ++ DFGL+ P R +G + APE
Sbjct: 129 ---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
K SDV+SFGV L ELLT
Sbjct: 186 LKEC--KFYYASDVWSFGVTLYELLT 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K L+ I K E + VL RHP L
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ H +R R + R A L ++H
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFF--HLSRE--RVFTEERARF-YGAEIVSALEYLH 125
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-----SIFAPPSTVPRSNGYRAPELSS 533
S + + +IK N++LDK G+ +++DFGL S A T + Y APE+
Sbjct: 126 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 182 DNDYGRA--VDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K L+ I K E + VL RHP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ H +R R + R A L ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFF--HLSRE--RVFTEERARF-YGAEIVSALEYLH 122
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-----SIFAPPSTVPRSNGYRAPELSS 533
S + + +IK N++LDK G+ +++DFGL S A T + Y APE+
Sbjct: 123 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 179 DNDYGRA--VDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K L+ I K E + VL RHP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ H +R R + R A L ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFF--HLSRE--RVFTEERARF-YGAEIVSALEYLH 122
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-----SIFAPPSTVPRSNGYRAPELSS 533
S + + +IK N++LDK G+ +++DFGL S A T + Y APE+
Sbjct: 123 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + D + GV++ E++ G+ P
Sbjct: 179 DN--DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+EYM NGSL L + D + G RG+A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 162
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGL + P + G + P +S +
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 367 MLGKGGFGTAYKAVLDD---GSVVAVKRLKDASIGGKREFE---QHMEVLGRLRHPNLVG 420
+LGKG FG + D G AVK + + K + E + +++L +L HPN++
Sbjct: 56 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L ++ + LV E G LF + R +I G+ ++H
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 481 CKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSI-FAPPSTVPRSNG---YRAPELSS 533
K+ H ++K N+LL+ K N R+ DFGLS F + G Y APE+
Sbjct: 169 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 224
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP-----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G CP + D +LP+W
Sbjct: 225 G---TYDEKCDVWSTGVILYILLSG-CPPFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 367 MLGKGGFGTAYKAVLDD---GSVVAVKRLKDASIGGKREFE---QHMEVLGRLRHPNLVG 420
+LGKG FG + D G AVK + + K + E + +++L +L HPN++
Sbjct: 57 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L ++ + LV E G LF + R +I G+ ++H
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 481 CKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSI-FAPPSTVPRSNG---YRAPELSS 533
K+ H ++K N+LL+ K N R+ DFGLS F + G Y APE+
Sbjct: 170 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 225
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP-----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G CP + D +LP+W
Sbjct: 226 G---TYDEKCDVWSTGVILYILLSG-CPPFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKR-EFEQHMEVLGRLRHPNLVGLKA 423
E +G GGF A + G +VA+K + ++G + +E L LRH ++ L
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 424 YYFAREEKLLVSEYMPNGSLF-WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ +V EY P G LF +++ +R TR+ + +A++H
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEE-----ETRV-VFRQIVSAVAYVH---- 125
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------STVPRSNGYRAPELSSS 534
S H ++K N+L D+ ++ DFGL A P T S Y APEL
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLC--AKPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXX--XVDLPRWV 583
S+ +DV+S G+LL L+ G P D D+P+W+
Sbjct: 184 KSYLGSE-ADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWL 233
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD--ASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +GKG FG +K + + V ++ D + + +Q + VL + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y + ++ EY+ GS LL P D + +GL ++H S
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLH----S 138
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQS--- 540
K H +IK+ NVLL + G+ +++DFG++ + + R+ P + + +QS
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 541 QKSDVYSFGVLLLELLTGKCPS 562
K+D++S G+ +EL G+ P+
Sbjct: 199 SKADIWSLGITAIELAKGEPPN 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 31/231 (13%)
Query: 347 VFFEGTKRFELEDLLRASAE-------MLGKGGFGTAYKAV-LDDGSVV----AVKRLKD 394
++F+G+ + LLR E +LG G FGT YK + + +G V A+K L++
Sbjct: 20 LYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 79
Query: 395 A-SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNR 451
A S +E V+ + +P++ L +L +++ MP G L + H +
Sbjct: 80 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDN 138
Query: 452 GPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL 511
+ L+W ++ A+G+ ++ + +L H ++ + NVL+ + +++DFGL
Sbjct: 139 IGSQYLLNWCVQI------AKGMNYL----EDRRLVHRDLAARNVLVKTPQHVKITDFGL 188
Query: 512 S-IFAPPSTVPRSNGYRAP----ELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ + + G + P L S R + +SDV+S+GV + EL+T
Sbjct: 189 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSV---VAVK------RLKDASIGGKREFEQHMEVLGRLRH 415
+ LG GG T Y A +D + VA+K R K+ ++ + FE+ + +L H
Sbjct: 16 VDKLGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETL---KRFEREVHNSSQLSH 70
Query: 416 PNLVGLKAYYFAREEKLLVSEYM--PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
N+V + + LV EY+ P S + HG PL T + G
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDG 123
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN------GYR 527
+ H +++ H +IK N+L+D ++ DFG++ +++ ++N Y
Sbjct: 124 IKHAH----DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+PE + G + +D+YS G++L E+L G+ P
Sbjct: 180 SPE--QAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRL---KDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+G+G +G +K D G +VA+K+ +D + K + + +L +L+HPNLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALRE-IRMLKQLKHPNLVNLLE 69
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ + LV EY + L L RG + + + L ++F C
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRG--------VPEHLVKSITWQTLQAVNF-CHK 120
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTV----PRSNGYRAPELSSSDGRK 538
H ++K N+L+ K ++ DFG + + PS + YR+PEL D +
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT-Q 179
Query: 539 QSQKSDVYSFGVLLLELLTG 558
DV++ G + ELL+G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 40/291 (13%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKR-----LKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+G+G F Y+A L DG VA+K+ L DA + + + +++L +L HPN++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK--ARADCIKEIDLLKQLNHPNVIKY 97
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
A + E +V E G L ++ + R + T K L +H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPERTVWKYFVQLCSALEHMH--- 153
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSDG 536
S ++ H +IK NV + TG ++ D GL F T + Y +PE +G
Sbjct: 154 -SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVF 596
+ KSD++S G LL E+ + P D ++L + + E
Sbjct: 213 --YNFKSDIWSLGCLLYEMAALQSPFYGD----------KMNLYSLCKKI-------EQC 253
Query: 597 DLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVS 647
D + EE L Q+ C + P++RP++++V + + + S
Sbjct: 254 DYPPLPSDHYSEE---LRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 368 LGKGGFGTAYKAV------LDDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
+G+G FG ++A + ++VAVK LK+ AS + +F++ ++ +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLL------------HGN-------RGPGRTPLDWT 461
L + L+ EYM G L L H + PG PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVP 521
+L IA A G+A++ K H ++ + N L+ + +++DFGLS +
Sbjct: 175 EQLCIARQVAAGMAYL----SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 522 RSNG-------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+++G + PE S + + +SDV+++GV+L E+ +
Sbjct: 231 KADGNDAIPIRWMPPE--SIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K L+ I K E + VL RHP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ H +R R + R A L ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFF--HLSRE--RVFTEERARF-YGAEIVSALEYLH 122
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRAPELSS 533
S + + +IK N++LDK G+ +++DFGL + +T+ G Y APE+
Sbjct: 123 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 179 DNDYGRA--VDWWGLGVVMYEMMCGRLP 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLK-----DASIGGKREFEQHMEVLGRLRHPNLV 419
+ LG+G F T YKA + +VA+K++K +A G R + +++L L HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
GL + + LV ++M ++ + TP + + +GL ++H
Sbjct: 76 GLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTL---QGLEYLH- 129
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-FAPPSTVPR----SNGYRAPELSSS 534
+ H ++K N+LLD+ G +++DFGL+ F P+ + YRAPEL
Sbjct: 130 ---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG 186
Query: 535 DGRKQSQKSDVYSFGVLLLELL 556
R D+++ G +L ELL
Sbjct: 187 -ARMYGVGVDMWAVGCILAELL 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
+LGKG +G Y L + +A+K + + + + + + L+H N+V +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGP---GRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ E +P GSL LL GP + + T+ + GL ++H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN-- 141
Query: 483 SLKLTHGNIKSTNVLLDK-TGNARVSDFGLS-----IFAPPSTVPRSNGYRAPELSSSDG 536
++ H +IK NVL++ +G ++SDFG S I T + Y APE+
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
R + +D++S G ++E+ TGK P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGS----VVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGL 421
+LG+G FG Y+ V + VAVK K D ++ K +F ++ L HP++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
E ++ E P G L L N+ + T + + + +A++
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYL---- 125
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAP----ELSSSDGR 537
+S+ H +I N+L+ ++ DFGLS + +++ R P S + R
Sbjct: 126 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 538 KQSQKSDVYSFGVLLLELLT-GKCP 561
+ + SDV+ F V + E+L+ GK P
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 368 LGKGGFGTAYKAVLD-----DGSVVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGL 421
LG+G FG D G +VAVK LK DA + ++Q +++L L H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 422 KAYY--FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
K LV EY+P GSL L R + L A G+A++H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLH- 151
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVP---RSNG-----YRAPEL 531
+ H ++ + NVLLD ++ DFGL+ P R +G + APE
Sbjct: 152 ---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLT 557
K SDV+SFGV L ELLT
Sbjct: 209 LKE--YKFYYASDVWSFGVTLYELLT 232
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 41/217 (18%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG FG ++ G VAVK RE E + V+ LRH N++G
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 100
Query: 425 YFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ A + K LVS+Y +GSLF L+ R + +K+A A GLA
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 154
Query: 477 IHFTCKSLK----LTHGNIKSTNVLLDKTGNARVSDFGLSI----------FAPPSTVPR 522
+H + + H ++KS N+L+ K G ++D GL++ AP V
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG- 213
Query: 523 SNGYRAPE-LSSSDGRKQSQ---KSDVYSFGVLLLEL 555
+ Y APE L S K + ++D+Y+ G++ E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K L+ I K E + VL RHP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ H +R R + R A L ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFF--HLSRE--RVFTEERARF-YGAEIVSALEYLH 122
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRAPELSS 533
S + + +IK N++LDK G+ +++DFGL + +T+ G Y APE+
Sbjct: 123 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 179 DNDYGRA--VDWWGLGVVMYEMMCGRLP 204
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
+LGKG +G Y L + +A+K + + + + + + L+H N+V +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGP---GRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ E +P GSL LL GP + + T+ + GL ++H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN-- 127
Query: 483 SLKLTHGNIKSTNVLLDK-TGNARVSDFGLS-----IFAPPSTVPRSNGYRAPELSSSDG 536
++ H +IK NVL++ +G ++SDFG S I T + Y APE+
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
R + +D++S G ++E+ TGK P
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K L+ I K E + VL RHP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ H +R R + R A L ++H
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFF--HLSRE--RVFTEERARF-YGAEIVSALEYLH 122
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRAPELSS 533
S + + +IK N++LDK G+ +++DFGL + +T+ G Y APE+
Sbjct: 123 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 179 DNDYGRA--VDWWGLGVVMYEMMCGRLP 204
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 367 MLGKGGFGTAYKAVLDD---GSVVAVKRLKDASIGGKREFE---QHMEVLGRLRHPNLVG 420
+LGKG FG + D G AVK + + K + E + +++L +L HPN+
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L ++ + LV E G LF + R +I G+ + H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 481 CKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPPSTVPRSN----GYRAPELSS 533
K+ H ++K N+LL+ K N R+ DFGLS S + Y APE+
Sbjct: 146 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH 201
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP-----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G CP + D +LP+W
Sbjct: 202 G---TYDEKCDVWSTGVILYILLSG-CPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K L+ I K E + VL RHP L
Sbjct: 16 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ H +R R + R A L ++H
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFF--HLSRE--RVFTEERARF-YGAEIVSALEYLH 127
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRAPELSS 533
S + + +IK N++LDK G+ +++DFGL + +T+ G Y APE+
Sbjct: 128 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 184 DNDYGRA--VDWWGLGVVMYEMMCGRLP 209
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 41/217 (18%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG FG ++ G VAVK RE E + V+ LRH N++G
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 87
Query: 425 YFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ A + K LVS+Y +GSLF L+ R + +K+A A GLA
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 141
Query: 477 IHFTCKSLK----LTHGNIKSTNVLLDKTGNARVSDFGLSI----------FAPPSTVPR 522
+H + + H ++KS N+L+ K G ++D GL++ AP V
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG- 200
Query: 523 SNGYRAPE-LSSSDGRKQSQ---KSDVYSFGVLLLEL 555
+ Y APE L S K + ++D+Y+ G++ E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 41/217 (18%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG FG ++ G VAVK RE E + V+ LRH N++G
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 62
Query: 425 YFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ A + K LVS+Y +GSLF L+ R + +K+A A GLA
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 116
Query: 477 IHFTCKSLK----LTHGNIKSTNVLLDKTGNARVSDFGLSI----------FAPPSTVPR 522
+H + + H ++KS N+L+ K G ++D GL++ AP V
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG- 175
Query: 523 SNGYRAPE-LSSSDGRKQSQ---KSDVYSFGVLLLEL 555
+ Y APE L S K + ++D+Y+ G++ E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 41/217 (18%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG FG ++ G VAVK RE E + V+ LRH N++G
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 61
Query: 425 YFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ A + K LVS+Y +GSLF L+ R + +K+A A GLA
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 115
Query: 477 IHFTCKSLK----LTHGNIKSTNVLLDKTGNARVSDFGLSI----------FAPPSTVPR 522
+H + + H ++KS N+L+ K G ++D GL++ AP V
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG- 174
Query: 523 SNGYRAPE-LSSSDGRKQSQ---KSDVYSFGVLLLEL 555
+ Y APE L S K + ++D+Y+ G++ E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 341 YERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA- 395
YE + E K + ++ + +++G G FG L S VA+K LK
Sbjct: 28 YEDPTQTVHEFAKELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 396 SIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR 455
+ +R+F ++G+ HPN++ L+ + ++V+E M NGSL L +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH----- 140
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--I 513
D + G RG+A + H ++ + N+L++ +VSDFGLS +
Sbjct: 141 ---DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 514 FAPPSTVPRSNGYRAP-ELSSSDG---RKQSQKSDVYSFGVLLLELLT 557
P + G + P +S + RK + SDV+S+G++L E+++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+E M NGSL L + D + G RG+A
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 133
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGLS + P + G + P +S +
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 41/217 (18%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG FG ++ G VAVK RE E + V+ LRH N++G
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 67
Query: 425 YFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ A + K LVS+Y +GSLF L+ R + +K+A A GLA
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 121
Query: 477 IHFTCKSLK----LTHGNIKSTNVLLDKTGNARVSDFGLSI----------FAPPSTVPR 522
+H + + H ++KS N+L+ K G ++D GL++ AP V
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG- 180
Query: 523 SNGYRAPE-LSSSDGRKQSQ---KSDVYSFGVLLLEL 555
+ Y APE L S K + ++D+Y+ G++ E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
+++G G FG L S VA+K LK + +R+F ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L+ + ++V+E M NGSL L + D + G RG+A
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMKY 162
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAP-ELSSSDG- 536
+ H ++ + N+L++ +VSDFGLS + P + G + P +S +
Sbjct: 163 LSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 537 --RKQSQKSDVYSFGVLLLELLT 557
RK + SDV+S+G++L E+++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 41/217 (18%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E +GKG FG ++ G VAVK RE E + V+ LRH N++G
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 64
Query: 425 YFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ A + K LVS+Y +GSLF L+ R + +K+A A GLA
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 118
Query: 477 IHFTCKSLK----LTHGNIKSTNVLLDKTGNARVSDFGLSI----------FAPPSTVPR 522
+H + + H ++KS N+L+ K G ++D GL++ AP V
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG- 177
Query: 523 SNGYRAPE-LSSSDGRKQSQ---KSDVYSFGVLLLEL 555
+ Y APE L S K + ++D+Y+ G++ E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGS----VVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGL 421
+LG+G FG Y+ V + VAVK K D ++ K +F ++ L HP++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
E ++ E P G L L N+ + T + + + +A++
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYL---- 129
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAP----ELSSSDGR 537
+S+ H +I N+L+ ++ DFGLS + +++ R P S + R
Sbjct: 130 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 538 KQSQKSDVYSFGVLLLELLT-GKCP 561
+ + SDV+ F V + E+L+ GK P
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGS----VVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGL 421
+LG+G FG Y+ V + VAVK K D ++ K +F ++ L HP++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
E ++ E P G L L N+ + T + + + +A++
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYL---- 141
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAP----ELSSSDGR 537
+S+ H +I N+L+ ++ DFGLS + +++ R P S + R
Sbjct: 142 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 538 KQSQKSDVYSFGVLLLELLT-GKCP 561
+ + SDV+ F V + E+L+ GK P
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 365 AEMLGKGGFGTA----YKAVLDDGSVVAVKRLKDASIGGKRE---FEQHMEVLGRLRHPN 417
+++G+G FG +KA V A+K L + + + F + +++ P
Sbjct: 80 VKVIGRGAFGEVQLVRHKA---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
+V L + + +V EYMP G L L+ P + +T + +A A I
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA------I 190
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI------FAPPSTVPRSNGYRAPEL 531
H S+ L H ++K N+LLDK G+ +++DFG + T + Y +PE+
Sbjct: 191 H----SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
Query: 532 SSSDGRK--QSQKSDVYSFGVLLLELLTGKCPSVID 565
S G ++ D +S GV L E+L G P D
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +G+G +G YKA + G A+K RL+ G + + +L L+H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
++ +LV E++ + L LL G L+ T G+A+ C
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGG----LESVTAKSFLLQLLNGIAY----CHD 118
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPP----STVPRSNGYRAPELSSSDGRK 538
++ H ++K N+L+++ G +++DFGL+ F P + + YRAP++ +K
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG-SKK 177
Query: 539 QSQKSDVYSFGVLLLELLTG 558
S D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +G+G +G YKA + G A+K RL+ G + + +L L+H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
++ +LV E++ + L LL G L+ T G+A+ C
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGG----LESVTAKSFLLQLLNGIAY----CHD 118
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPP----STVPRSNGYRAPELSSSDGRK 538
++ H ++K N+L+++ G +++DFGL+ F P + + YRAP++ +K
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG-SKK 177
Query: 539 QSQKSDVYSFGVLLLELLTG 558
S D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E +G+G +G YKA + G A+K RL+ G + + +L L+H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
++ +LV E++ + L LL G L+ T G+A+ C
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGG----LESVTAKSFLLQLLNGIAY----CHD 118
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSDGRK 538
++ H ++K N+L+++ G +++DFGL+ F P YRAP++ +K
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG-SKK 177
Query: 539 QSQKSDVYSFGVLLLELLTG 558
S D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 41/238 (17%)
Query: 351 GTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEV- 409
GT+ + + E+ +G FG +KA L + VAVK I K+ ++ EV
Sbjct: 15 GTENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIF---PIQDKQSWQNEYEVY 70
Query: 410 -LGRLRHPNLVGLKAYYFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDW 460
L ++H N++ + E++ L++ + GSL L N + W
Sbjct: 71 SLPGMKHENIL----QFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSW 120
Query: 461 TTRLKIAAGAARGLAFIHFTCKSLK------LTHGNIKSTNVLLDKTGNARVSDFGLSI- 513
IA ARGLA++H LK ++H +IKS NVLL A ++DFGL++
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 514 FAPPSTVPRSNG------YRAPEL---SSSDGRKQSQKSDVYSFGVLLLELLTGKCPS 562
F + ++G Y APE+ + + R + D+Y+ G++L EL + +C +
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS-RCTA 237
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 344 GSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SI 397
G+M K E + + ++LG G FGT YK + + +G V A+K L++A S
Sbjct: 1 GAMALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 55
Query: 398 GGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGR 455
+E V+ + +P++ L +L +++ MP G L + H + +
Sbjct: 56 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQ 114
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IF 514
L+W ++ A G+ ++ + +L H ++ + NVL+ + +++DFGL+ +
Sbjct: 115 YLLNWCVQI------AEGMNYL----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
Query: 515 APPSTVPRSNGYRAP----ELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G + P L S R + +SDV+S+GV + EL+T
Sbjct: 165 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 363 ASAEMLGKGGFGTAYKAVLDDGSVVAVKRL--KDASIGGKREFEQHMEVLGRLRHPNLVG 420
A E +GKG +G ++ L G VAVK +D RE E + VL LRH N++G
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQ-SWFRETEIYNTVL--LRHDNILG 66
Query: 421 LKAYYFARE----EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
A + L++ Y +GSL+ L R L+ L++A AA GLA
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAH 120
Query: 477 IHF----TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-------FAPPSTVPR--S 523
+H T + H + KS NVL+ ++D GL++ + PR +
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 524 NGYRAPEL----SSSDGRKQSQKSDVYSFGVLLLEL 555
Y APE+ +D + + +D+++FG++L E+
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 75 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 127
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 128 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 87 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 139
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 140 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 134 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 84 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 137 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 91 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 143
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 144 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 84 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 137 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 83 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 136 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAVL----DDGSV----VAVKRLKDASIGGKREFEQHMEV 409
EDL+ E LG+G F +K V D G + V +K L A F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 410 LGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG 469
+ +L H +LV F +E +LV E++ GSL L N + ++ +L++A
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQ 121
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLL-----DKTGN---ARVSDFGLSIFAPPSTVP 521
A + F+ + L HGN+ + N+LL KTGN ++SD G+SI P +
Sbjct: 122 LAWAMHFL----EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
+ P + + + +D +SFG L E+ +G
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 88 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 141 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E++G G +G YK + G + A+K + D + + E +Q + +L + H +
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEEEIKQEINMLKKYSHHR--NIAT 85
Query: 424 YYFAREEK---------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
YY A +K LV E+ GS+ L+ +G +W I RGL
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAY--ICREILRGL 142
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGY------RA 528
+ +H K+ H +IK NVLL + ++ DFG+S TV R N + A
Sbjct: 143 SHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA-QLDRTVGRRNTFIGTPYWMA 197
Query: 529 PELSSSDGRKQSQ---KSDVYSFGVLLLELLTGKCP 561
PE+ + D + KSD++S G+ +E+ G P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 134 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGLK 422
+LGKG F Y+A + G VA+K + ++ G + + +++ +L+HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
Y+ LV E NG + L NR P G+ ++H
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL-KNR---VKPFSENEARHFMHQIITGMLYLH---- 129
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-----FAPPSTVPRSNGYRAPELSSSDGR 537
S + H ++ +N+LL + N +++DFGL+ T+ + Y +PE+++
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA- 188
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+SDV+S G + LL G+ P
Sbjct: 189 -HGLESDVWSLGCMFYTLLIGRPP 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 26/225 (11%)
Query: 350 EGTKRFELEDL--LRASAEMLGKGGFGTAYKAVLDDG---SVVAVKRLKDASIGGKR-EF 403
EG + + ED+ + ++LG G F A +D +VA+K + ++ GK
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 404 EQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
E + VL +++HPN+V L Y + L+ + + G LF +R +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDA 118
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL---LDKTGNARVSDFGLSIFAPP--- 517
++ + ++H L + H ++K N+L LD+ +SDFGLS P
Sbjct: 119 SRLIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 518 -STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
ST + GY APE+ + + S+ D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 368 LGKGGFGTAYKAVLD-----DGSVVAVKRLKDASIGGK-REFEQHMEVLGRLRHPNLVGL 421
LG+G FG D G VAVK LK S G + ++ +E+L L H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 422 KAYYFAREEK----LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
K E+ L+ E++P+GSL L N+ ++ +LK A +G+ ++
Sbjct: 77 KG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYL 130
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPRSNG----YRAP 529
S + H ++ + NVL++ ++ DFGL+ TV + AP
Sbjct: 131 ----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLT 557
E K SDV+SFGV L ELLT
Sbjct: 187 ECLMQS--KFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 368 LGKGGFGTAYKAVLD-----DGSVVAVKRLKDASIGGK-REFEQHMEVLGRLRHPNLVGL 421
LG+G FG D G VAVK LK S G + ++ +E+L L H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 422 KAYYFAREEK----LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
K E+ L+ E++P+GSL L N+ ++ +LK A +G+ ++
Sbjct: 89 KG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYL 142
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPRSNG----YRAP 529
S + H ++ + NVL++ ++ DFGL+ TV + AP
Sbjct: 143 ----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLT 557
E K SDV+SFGV L ELLT
Sbjct: 199 ECLMQS--KFYIASDVWSFGVTLHELLT 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 134 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 84 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 137 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 386 VVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL--KAYYFAREEKLLVSEYMPNGSL 443
VV V +++D S R+F + L HPN++ + L++ + P GSL
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSL 96
Query: 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN 503
+ +LH +D + +K A ARG AF+H T + L H + S +V +D+
Sbjct: 97 YNVLHEGTN---FVVDQSQAVKFALDXARGXAFLH-TLEPLIPRHA-LNSRSVXIDEDXT 151
Query: 504 ARVS--DFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQSQKS-DVYSFGVLLLELLTGKC 560
AR+S D S +P + + APE +++S D +SF VLL EL+T +
Sbjct: 152 ARISXADVKFSFQSPGRXY--APAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREV 209
Query: 561 P 561
P
Sbjct: 210 P 210
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVG 420
+ LG+G FG A G VA+K + + + E+ + L LRHP+++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L +++E ++V EY N +++ ++ + + ++ A
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE----------Y 128
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG---YRAPELSSSDG 536
C K+ H ++K N+LLD+ N +++DFGLS I + + S G Y APE+ S
Sbjct: 129 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK- 187
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L +L + P
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVG 420
+ LG+G FG A G VA+K + + + E+ + L LRHP+++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L +++E ++V EY N +++ ++ + + ++ A
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE----------Y 127
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG---YRAPELSSSDG 536
C K+ H ++K N+LLD+ N +++DFGLS I + + S G Y APE+ S
Sbjct: 128 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK- 186
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L +L + P
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVG 420
+ LG+G FG A G VA+K + + + E+ + L LRHP+++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L +++E ++V EY N +++ ++ + + ++ A
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE----------Y 122
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG---YRAPELSSSDG 536
C K+ H ++K N+LLD+ N +++DFGLS I + + S G Y APE+ S
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK- 181
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L +L + P
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 33/215 (15%)
Query: 368 LGKGGFGTAYKAVLDDG-SVVAVKRLKDASIGGKR-------------EFEQHMEVLGRL 413
LG G +G +G S A+K +K + R E + +L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
HPN++ L + ++ LV+E+ G LF + R D I G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDECDAANIMKQILSG 158
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTG---NARVSDFGLSIFAPPSTVPRSN----GY 526
+ ++H + H +IK N+LL+ N ++ DFGLS F R Y
Sbjct: 159 ICYLH----KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ +K ++K DV+S GV++ LL G P
Sbjct: 215 IAPEVLK---KKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGG---KREFEQHMEVLGRLRHPNLVG 420
+ LG+G FG A G VA+K + + + E+ + L LRHP+++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L +++E ++V EY N +++ ++ + + ++ A
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE----------Y 118
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG---YRAPELSSSDG 536
C K+ H ++K N+LLD+ N +++DFGLS I + + S G Y APE+ S
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK- 177
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L +L + P
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 134
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 135 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 26/225 (11%)
Query: 350 EGTKRFELEDL--LRASAEMLGKGGFGTAYKAVLDDG---SVVAVKRLKDASIGGKR-EF 403
EG + + ED+ + ++LG G F A +D +VA+K + ++ GK
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 404 EQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
E + VL +++HPN+V L Y + L+ + + G LF +R +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDA 118
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL---LDKTGNARVSDFGLSIFAPP--- 517
++ + ++H L + H ++K N+L LD+ +SDFGLS P
Sbjct: 119 SRLIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 518 -STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
ST + GY APE+ + + S+ D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 84 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 137 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 136 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 81 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 134 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 137
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 138 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 26/225 (11%)
Query: 350 EGTKRFELEDL--LRASAEMLGKGGFGTAYKAVLDDG---SVVAVKRLKDASIGGKR-EF 403
EG + + ED+ + ++LG G F A +D +VA+K + ++ GK
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 404 EQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
E + VL +++HPN+V L Y + L+ + + G LF +R +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDA 118
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL---LDKTGNARVSDFGLSIFAPP--- 517
++ + ++H L + H ++K N+L LD+ +SDFGLS P
Sbjct: 119 SRLIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 518 -STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
ST + GY APE+ + + S+ D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VAVK + + ++ + + ++ L HPN+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ LV EY G +F L HG W + A + ++ + + C
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHG----------WMKEKEARAKFRQIVSAVQY-CH 123
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPP-STVPRSNGYRAPELSSSDGRK 538
+ H ++K+ N+LLD N +++DFG S F T S Y APEL G+K
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ--GKK 181
Query: 539 -QSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L L++G P
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H N+ + N ++ ++ DFG++ + R G + A
Sbjct: 145 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 201 PE-SLKDG-VFTTSSDMWSFGVVLWEI 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 134
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 135 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 53/314 (16%)
Query: 368 LGKGGFGTAYKAVLDDGS-VVAVKRLKDASIGGKREFEQHMEVLGRLR----HPNLVGLK 422
LG+G F K V + AVK I KR + + L+ HPN+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVK------IISKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ + LV E + G LF + + T + R ++A ++ +H
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA-----VSHMH---- 123
Query: 483 SLKLTHGNIKSTNVLL-DKTGN--ARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSS 534
+ + H ++K N+L D+ N ++ DFG + PP P Y APEL +
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ 183
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAE 594
+G +S D++S GV+L +L+G+ P V++ + ++
Sbjct: 184 NGYDES--CDLWSLGVILYTMLSGQVP--FQSHDRSLTCTSAVEIMKKIKK--------G 231
Query: 595 VFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLIEELRGVEVSPCHENFD 654
F E +K++ +E L+Q + P++R MS G+ + ++
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQ---GLLTVDPNKRLKMS----------GLRYNEWLQDGS 278
Query: 655 SVSDSPCLSEDTLG 668
+S +P ++ D LG
Sbjct: 279 QLSSNPLMTPDILG 292
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H N+ + N ++ ++ DFG++ + R G + A
Sbjct: 146 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 202 PE-SLKDG-VFTTSSDMWSFGVVLWEI 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 351 GTKRFELE-DLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHME 408
G + FE++ D L E LG+G +G K + G ++AVKR++ A++ + + M+
Sbjct: 42 GNQNFEVKADDLEPIME-LGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMD 99
Query: 409 VLGRLRHPNLVGLKAYYFA--REEKLLVSEYMPNGSLFWLLHGNRGPGRT-PLDWTTRLK 465
+ +R + +Y A RE + + + + SL G+T P D K
Sbjct: 100 LDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG--K 157
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG 525
IA + L +H L + H ++K +NVL++ G ++ DFG+S + S +
Sbjct: 158 IAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 526 ----YRAPELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
Y APE + + ++ S KSD++S G+ ++EL + P
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 62 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILY 116
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ T ++ DFGLS + ST +++
Sbjct: 117 AYQLSTALAYL----ESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 173 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VA+K + + ++ + + ++ L HPN+V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ L+ EY G +F L HG + K A R + C
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGR-----------MKEKEARSKFRQIVSAVQYCH 128
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPRSNGYRAPELSSSDGRK 538
++ H ++K+ N+LLD N +++DFG S + T S Y APEL G+K
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQ--GKK 186
Query: 539 -QSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L L++G P
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 365 AEMLGKGGFGTAYKAVLD-DGSVVAVK---RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LG G FG G VAVK R K S+ + ++ ++ L RHP+++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + +V EY+ G LF + + GR RL + L+ + +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRL-----FQQILSAVDY- 126
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN----GYRAPELSSSDG 536
C + H ++K NVLLD NA+++DFGLS R++ Y APE+ S G
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS--G 184
Query: 537 RKQSQ-KSDVYSFGVLLLELLTGKCP 561
R + + D++S GV+L LL G P
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H ++ + N ++ ++ DFG++ + R G + A
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 201 PE-SLKDG-VFTTSSDMWSFGVVLWEI 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 26/225 (11%)
Query: 350 EGTKRFELEDL--LRASAEMLGKGGFGTAYKAVLDDG---SVVAVKRLKDASIGGKR-EF 403
EG + + ED+ + ++LG G F A +D +VA+K + ++ GK
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKKALEGKEGSM 63
Query: 404 EQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
E + VL +++HPN+V L Y + L+ + + G LF +R +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDA 118
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVL---LDKTGNARVSDFGLSIFAPP--- 517
++ + ++H L + H ++K N+L LD+ +SDFGLS P
Sbjct: 119 SRLIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 518 -STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
ST + GY APE+ + + S+ D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H ++ + N ++ ++ DFG++ + R G + A
Sbjct: 142 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 198 PE-SLKDG-VFTTSSDMWSFGVVLWEI 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H ++ + N ++ ++ DFG++ + R G + A
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 201 PE-SLKDG-VFTTSSDMWSFGVVLWEI 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 89
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 132
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 133 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K LK I K E + VL RHP L
Sbjct: 157 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ L R + A L ++H
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH 268
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNGYRAPELSS 533
+ + ++K N++LDK G+ +++DFGL A T + Y APE+
Sbjct: 269 ---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 326 DNDYGRA--VDWWGLGVVMYEMMCGRLP 351
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 365 AEMLGKGGFGTAYKAVLD-DGSVVAVK---RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
+ LG G FG G VAVK R K S+ + ++ ++ L RHP+++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + +V EY+ G LF + + GR RL + L+ + +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRL-----FQQILSAVDY- 126
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDG 536
C + H ++K NVLLD NA+++DFGLS R S Y APE+ S G
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVIS--G 184
Query: 537 RKQSQ-KSDVYSFGVLLLELLTGKCP 561
R + + D++S GV+L LL G P
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K LK I K E + VL RHP L
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ L R + A L ++H
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH 265
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNGYRAPELSS 533
+ + ++K N++LDK G+ +++DFGL A T + Y APE+
Sbjct: 266 ---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 323 DNDYGRA--VDWWGLGVVMYEMMCGRLP 348
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K LK I K E + VL RHP L
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ L R + A L ++H
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH 125
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRAPELSS 533
+ + ++K N++LDK G+ +++DFGL +T+ G Y APE+
Sbjct: 126 ---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 183 DNDYGRA--VDWWGLGVVMYEMMCGRLP 208
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 89
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 132
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 133 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K LK I K E + VL RHP L
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ L R + A L ++H
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH 127
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRAPELSS 533
+ + ++K N++LDK G+ +++DFGL +T+ G Y APE+
Sbjct: 128 ---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 185 DNDYGRA--VDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 366 EMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNL 418
++LGKG FG K +L G A+K LK I K E + VL RHP L
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
LK + + V EY G LF+ L R + A L ++H
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH 126
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRAPELSS 533
+ + ++K N++LDK G+ +++DFGL +T+ G Y APE+
Sbjct: 127 ---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ ++ D + GV++ E++ G+ P
Sbjct: 184 DNDYGRA--VDWWGLGVVMYEMMCGRLP 209
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 97
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 140
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 141 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 89
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 132
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 133 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 91
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 134
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 135 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 89
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 132
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 133 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 368 LGKGGFGTAYKA--VLDDGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKA 423
+GKG F A VL G VAVK + + ++ + + ++ L HPN+V L
Sbjct: 23 IGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 424 YYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ LV EY G +F L HG + K A R + C
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGR-----------MKEKEARAKFRQIVSAVQYC 130
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLS----IFAPPSTVPRSNGYRAPELSSSDGR 537
+ H ++K+ N+LLD N +++DFG S + T S Y APEL G+
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQ--GK 188
Query: 538 K-QSQKSDVYSFGVLLLELLTGKCP 561
K + DV+S GV+L L++G P
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 34/254 (13%)
Query: 363 ASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ E+LG G FG +K G +A K +K + K E + + V+ +L H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ ++ + +LV EY+ G LF + + T LD +K G+ +H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELDTILFMK---QICEGIRHMH--- 204
Query: 482 KSLKLTHGNIKSTNVLL--DKTGNARVSDFGLSIFAPPSTVPRSN----GYRAPELSSSD 535
+ + H ++K N+L ++ DFGL+ P + N + APE+ + D
Sbjct: 205 -QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCPSVIDXXXXXXXXXXXVDLPRWVQSVVREEWTAEV 595
S +D++S GV+ LL+G P + D RW
Sbjct: 264 F--VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC---RW------------- 305
Query: 596 FDLELMRYKDIEEE 609
DLE ++DI EE
Sbjct: 306 -DLEDEEFQDISEE 318
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 49/277 (17%)
Query: 307 YFWRNYVKNKTRSKLLESEKILYSSSPYPAQQAGYERGSMVFFEGTK-----RFELEDLL 361
Y ++ K + R K++ES YE S F + T+ ++E
Sbjct: 4 YKYKQKPKYQVRWKIIES----------------YEGNSYTFIDPTQLPYNEKWEFPRNN 47
Query: 362 RASAEMLGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL- 413
+ LG G FG TA+ +D + VAVK LK + ++E ++++ L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHG------NRGPGRTPLDWTTRLKIA 467
+H N+V L L+++EY G L L ++ GR PL+ L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFS 166
Query: 468 AGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
+ A+G+AF+ S H ++ + NVLL A++ DFGL+ I + + + N
Sbjct: 167 SQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE S D Q SDV+S+G+LL E+ +
Sbjct: 223 RLPVKWMAPE-SIFDCVYTVQ-SDVWSYGILLWEIFS 257
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + R++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 33/243 (13%)
Query: 341 YERGSMVFFEGTK-----RFELEDLLRASAEMLGKGGFG-----TAYKAVLDDGSV-VAV 389
YE S F + T+ ++E + LG G FG TA+ +D + VAV
Sbjct: 14 YEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV 73
Query: 390 KRLKDASIGGKRE-FEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLL 447
K LK + ++E ++++ L +H N+V L L+++EY G L L
Sbjct: 74 KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133
Query: 448 HG------NRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT 501
++ GR PL+ L ++ A+G+AF+ S H ++ + NVLL
Sbjct: 134 RRKAEADLDKEDGR-PLELRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNG 188
Query: 502 GNARVSDFGLS--IFAPPSTVPRSNG-----YRAPELSSSDGRKQSQKSDVYSFGVLLLE 554
A++ DFGL+ I + + + N + APE S D Q SDV+S+G+LL E
Sbjct: 189 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE-SIFDCVYTVQ-SDVWSYGILLWE 246
Query: 555 LLT 557
+ +
Sbjct: 247 IFS 249
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 94
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 137
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 138 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 95
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 138
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 139 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 86
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 129
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 130 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 136
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 137 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 43/224 (19%)
Query: 366 EMLGKGGFGTAYKAV--LDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHPNLVGLK 422
+ LG+GGFG ++A +DD + A+KR++ + RE + ++ L +L HP G+
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHP---GIV 66
Query: 423 AYYFAREEKLLVSEYMPNGSLFWL---LHGNRGP-------GRTPLDWTTR---LKIAAG 469
Y+ A EK + P+ +L + R GR ++ R L I
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-----------SIFAPPS 518
A + F+H S L H ++K +N+ +V DFGL ++ P
Sbjct: 127 IAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 519 TVPRSNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
R G Y +PE G S K D++S G++L ELL
Sbjct: 183 AYARHTGQVGTKLYMSPE--QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 136
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 137 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 109
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 152
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 153 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 245
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VAVK + + ++ + + ++ L HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ LV EY G +F L HG + K A R + C
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-----------MKEKEARAKFRQIVSAVQYCH 130
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPP-STVPRSNGYRAPELSSSDGRK 538
+ H ++K+ N+LLD N +++DFG S F T S Y APEL G+K
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ--GKK 188
Query: 539 -QSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L L++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 87
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 130
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 131 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H ++ + N ++ ++ DFG++ + R G + A
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 201 PE-SLKDG-VFTTSSDMWSFGVVLWEI 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 87
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 130
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 131 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 89
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 132
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 133 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 441
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 442 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILY 496
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ T ++ DFGLS + ST +++
Sbjct: 497 AYQLSTALAYL----ESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 553 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VAVK + + ++ + + ++ L HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ LV EY G +F L HG + K A R + C
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-----------MKEKEARAKFRQIVSAVQYCH 130
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPP-STVPRSNGYRAPELSSSDGRK 538
+ H ++K+ N+LLD N +++DFG S F T S Y APEL G+K
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ--GKK 188
Query: 539 -QSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L L++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 347 VFFEG-----TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASI 397
++F+G T+ +E++ +G+G FG ++ + + VA+K K+ +
Sbjct: 20 LYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS 79
Query: 398 GGKRE-FEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRT 456
RE F Q + + HP++V L ++ E G L L +
Sbjct: 80 DSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----Y 134
Query: 457 PLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP 516
LD + + A + LA++ +S + H +I + NVL+ ++ DFGLS +
Sbjct: 135 SLDLASLILYAYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Query: 517 PSTVPRSN------GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
ST +++ + APE S + R+ + SDV+ FGV + E+L
Sbjct: 191 DSTYYKASKGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++L G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 88 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 141 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLRE-IKILLRFRHENIIGINDI 93
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 136
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 137 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 229
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFG + + + G + P L
Sbjct: 134 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 44/224 (19%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDA---SIGGKREFEQHMEVLGRLRHPNLVGLKA 423
LGKG +G +K++ G VVAVK++ DA S +R F + M + H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 424 YYFAREEK--LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
A ++ LV +YM L ++ N L+ + + + + ++H
Sbjct: 77 VLRADNDRDVYLVFDYMET-DLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH--- 126
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-----IFAPPSTVPRS------------- 523
S L H ++K +N+LL+ + +V+DFGLS I + +P S
Sbjct: 127 -SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 524 --------NGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
YRAPE+ K ++ D++S G +L E+L GK
Sbjct: 186 ILTDYVATRWYRAPEILLG-STKYTKGIDMWSLGCILGEILCGK 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++L G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 134 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 119/282 (42%), Gaps = 53/282 (18%)
Query: 307 YFWRNYVKNKTRSKLLESEKILYSSSPYPAQQAGYERGSMVFFEGTK-----RFELEDLL 361
Y ++ K + R K++ES YE S F + T+ ++E
Sbjct: 4 YKYKQKPKYQVRWKIIES----------------YEGNSYTFIDPTQLPYNEKWEFPRNN 47
Query: 362 RASAEMLGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL- 413
+ LG G FG TA+ +D + VAVK LK + ++E ++++ L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTT 462
+H N+V L L+++EY G L L R PG L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 463 RLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTV 520
L ++ A+G+AF+ S H ++ + NVLL A++ DFGL+ I + +
Sbjct: 168 LLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 521 PRSNG-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ N + APE S D Q SDV+S+G+LL E+ +
Sbjct: 224 VKGNARLPVKWMAPE-SIFDCVYTVQ-SDVWSYGILLWEIFS 263
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL +++ N + + L+
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ----------------- 136
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 137 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 229
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H ++ + N ++ ++ DFG++ + R G + A
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 201 PE-SLKDG-VFTTSSDMWSFGVVLWEI 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+ L++A S +E V+ + +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 115 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 167
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 168 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 105 PSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPXXXXXXXXXXXX 164
P+ N ++ L +S+N +G P + S+ L+ L+L N+ SG IP
Sbjct: 623 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 682
Query: 165 XXEANRFSG--PITGLDLRNLQDFNVSGNHLSGQIPK--SLSGFPDSAFTQNAALCGSPM 220
+N+ G P L L + ++S N+LSG IP+ FP + F N LCG P+
Sbjct: 683 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 742
Query: 221 QAC 223
C
Sbjct: 743 PRC 745
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 90 LRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFS 148
L+ L L+ N FTG +P +LSN + L L LS N +G P S+ SL +L L L N
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 149 GQIPXXXXXXXXXXXXXXEANRFSGPI-TGL-DLRNLQDFNVSGNHLSGQIPK 199
G+IP + N +G I +GL + NL ++S N L+G+IPK
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 22 KASTSPDLNAL--LDFKASSDEANKLTTWNSTSDPCSWTGVSCLQNRVSHLVLENLQLSG 79
K S LN+L LD A+S + W SD C + HL + ++SG
Sbjct: 140 KVSGGLKLNSLEVLDLSANSISGANVVGW-VLSDGCG---------ELKHLAISGNKISG 189
Query: 80 SLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYR 139
+ ++ L L + N F+ +P L + +AL+ L +S N +G+F ++S+ L
Sbjct: 190 DVD-VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKL 248
Query: 140 LDLSFNNFSGQIPXXXXXXXXXXXXXXEANRFSGPI-----------TGLDLRNLQDFNV 188
L++S N F G IP N+F+G I TGLDL
Sbjct: 249 LNISSNQFVGPIPPLPLKSLQYLSLA--ENKFTGEIPDFLSGACDTLTGLDL-------- 298
Query: 189 SGNHLSGQIP 198
SGNH G +P
Sbjct: 299 SGNHFYGAVP 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 48/170 (28%)
Query: 67 VSHLVLENLQLSGSL-QPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNG 125
+ HL + +LSG + +++ T+L++L++ N+F GP+P L L +L+ L L+ N F G
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP-LKSLQYLSLAENKFTG 280
Query: 126 EFPDSVS-SLFRLYRLDLS------------------------FNNFSGQIPXXXXXXXX 160
E PD +S + L LDLS NNFSG++P
Sbjct: 281 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD------ 334
Query: 161 XXXXXXEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210
T L +R L+ ++S N SG++P+SL+ S T
Sbjct: 335 ---------------TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 369
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 38/207 (18%)
Query: 28 DLNALLDFKASSDEANKLTTWNSTSDPCSWTGVSCLQNRVSHL----------------- 70
+++ L+ FK + N L W+S +PC++ GV+C ++V+ +
Sbjct: 10 EIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSS 69
Query: 71 ----------VLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNL---TALKLLF 117
L N ++GS+ L L L N +GPV +L++L + LK L
Sbjct: 70 LLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLN 129
Query: 118 LSHNNFNGEFPDSVSSLFRLYR---LDLSFNNFSGQIP---XXXXXXXXXXXXXXEANRF 171
+S N +FP VS +L LDLS N+ SG N+
Sbjct: 130 VSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKI 187
Query: 172 SGPITGLDLRNLQDFNVSGNHLSGQIP 198
SG + NL+ +VS N+ S IP
Sbjct: 188 SGDVDVSRCVNLEFLDVSSNNFSTGIP 214
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 82 QPLTSLTQLRVLSLKYNRFTGPVPS-LSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRL 140
Q L + L L L +N TG +PS LSN T L + LS+N GE P + L L L
Sbjct: 457 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 141 DLSFNNFSGQIPXXXXXXXXXXXXXXEANRFSGPITGLDLRNLQDFNVSGNHLSGQ 196
LS N+FSG IP N F+G I + Q ++ N ++G+
Sbjct: 517 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK--QSGKIAANFIAGK 570
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 18/134 (13%)
Query: 32 LLDFKA-SSDEANKLTTWNSTSDPCSWTG-------VSCLQNRVSHLVLE---NLQLSGS 80
LL+F+ S++ N+L+T N PC+ T N S + L+ N+ LSG
Sbjct: 590 LLEFQGIRSEQLNRLSTRN----PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNM-LSGY 644
Query: 81 L-QPLTSLTQLRVLSLKYNRFTGPVPS-LSNLTALKLLFLSHNNFNGEFPDSVSSLFRLY 138
+ + + S+ L +L+L +N +G +P + +L L +L LS N +G P ++S+L L
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 139 RLDLSFNNFSGQIP 152
+DLS NN SG IP
Sbjct: 705 EIDLSNNNLSGPIP 718
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 98 NRFTGPVP--SLSNLTALKLLFLSHNNFNGEFPDSVSSL-FRLYRLDLSFNNFSGQI--P 152
N F+G +P +L + LK+L LS N F+GE P+S+++L L LDLS NNFSG I
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 153 XXXXXXXXXXXXXXEANRFSG--PITGLDLRNLQDFNVSGNHLSGQIPKSL 201
+ N F+G P T + L ++S N+LSG IP SL
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 117
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 118 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 177 -CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 117
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 118 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 177 -CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAVL----DDGSV----VAVKRLKDASIGGKREFEQHMEV 409
EDL+ E LG+G F +K V D G + V +K L A F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 410 LGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG 469
+ +L H +LV +E +LV E++ GSL L N + ++ +L++A
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQ 121
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLL-----DKTGN---ARVSDFGLSIFAPPSTVP 521
A + F+ + L HGN+ + N+LL KTGN ++SD G+SI P +
Sbjct: 122 LAAAMHFL----EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
+ P + + + +D +SFG L E+ +G
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 120
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 121 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 180 -CKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 117
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 118 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 177 -CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 117
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 118 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 177 -CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 105 PSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIPXXXXXXXXXXXX 164
P+ N ++ L +S+N +G P + S+ L+ L+L N+ SG IP
Sbjct: 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685
Query: 165 XXEANRFSG--PITGLDLRNLQDFNVSGNHLSGQIPK--SLSGFPDSAFTQNAALCGSPM 220
+N+ G P L L + ++S N+LSG IP+ FP + F N LCG P+
Sbjct: 686 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 745
Query: 221 QAC 223
C
Sbjct: 746 PRC 748
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 90 LRVLSLKYNRFTGPVP-SLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFS 148
L+ L L+ N FTG +P +LSN + L L LS N +G P S+ SL +L L L N
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 149 GQIPXXXXXXXXXXXXXXEANRFSGPI-TGL-DLRNLQDFNVSGNHLSGQIPK 199
G+IP + N +G I +GL + NL ++S N L+G+IPK
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 48/170 (28%)
Query: 67 VSHLVLENLQLSGSL-QPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNG 125
+ HL + +LSG + +++ T+L++L++ N+F GP+P L L +L+ L L+ N F G
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP-LKSLQYLSLAENKFTG 283
Query: 126 EFPDSVS-SLFRLYRLDLS------------------------FNNFSGQIPXXXXXXXX 160
E PD +S + L LDLS NNFSG++P
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD------ 337
Query: 161 XXXXXXEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPKSLSGFPDSAFT 210
T L +R L+ ++S N SG++P+SL+ S T
Sbjct: 338 ---------------TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 22 KASTSPDLNAL--LDFKASSDEANKLTTWNSTSDPCSWTGVSCLQNRVSHLVLENLQLSG 79
K S LN+L LD A+S + W SD C + HL + ++SG
Sbjct: 143 KVSGGLKLNSLEVLDLSANSISGANVVGW-VLSDGCG---------ELKHLAISGNKISG 192
Query: 80 SLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYR 139
+ ++ L L + N F+ +P L + +AL+ L +S N +G+F ++S+ L
Sbjct: 193 DVD-VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKL 251
Query: 140 LDLSFNNFSGQIPXXXXXXXXXXXXXXEANRFSGPI-----------TGLDLRNLQDFNV 188
L++S N F G IP N+F+G I TGLDL
Sbjct: 252 LNISSNQFVGPIPPLPLKSLQYLSLA--ENKFTGEIPDFLSGACDTLTGLDL-------- 301
Query: 189 SGNHLSGQIP 198
SGNH G +P
Sbjct: 302 SGNHFYGAVP 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 38/207 (18%)
Query: 28 DLNALLDFKASSDEANKLTTWNSTSDPCSWTGVSCLQNRVSHL----------------- 70
+++ L+ FK + N L W+S +PC++ GV+C ++V+ +
Sbjct: 13 EIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSS 72
Query: 71 ----------VLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNL---TALKLLF 117
L N ++GS+ L L L N +GPV +L++L + LK L
Sbjct: 73 LLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLN 132
Query: 118 LSHNNFNGEFPDSVSSLFRLYR---LDLSFNNFSGQIP---XXXXXXXXXXXXXXEANRF 171
+S N +FP VS +L LDLS N+ SG N+
Sbjct: 133 VSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKI 190
Query: 172 SGPITGLDLRNLQDFNVSGNHLSGQIP 198
SG + NL+ +VS N+ S IP
Sbjct: 191 SGDVDVSRCVNLEFLDVSSNNFSTGIP 217
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 82 QPLTSLTQLRVLSLKYNRFTGPVPS-LSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRL 140
Q L + L L L +N TG +PS LSN T L + LS+N GE P + L L L
Sbjct: 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 141 DLSFNNFSGQIPXXXXXXXXXXXXXXEANRFSGPITGLDLRNLQDFNVSGNHLSGQ 196
LS N+FSG IP N F+G I + Q ++ N ++G+
Sbjct: 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK--QSGKIAANFIAGK 573
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 18/134 (13%)
Query: 32 LLDFKA-SSDEANKLTTWNSTSDPCSWTG-------VSCLQNRVSHLVLE---NLQLSGS 80
LL+F+ S++ N+L+T N PC+ T N S + L+ N+ LSG
Sbjct: 593 LLEFQGIRSEQLNRLSTRN----PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNM-LSGY 647
Query: 81 L-QPLTSLTQLRVLSLKYNRFTGPVPS-LSNLTALKLLFLSHNNFNGEFPDSVSSLFRLY 138
+ + + S+ L +L+L +N +G +P + +L L +L LS N +G P ++S+L L
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 139 RLDLSFNNFSGQIP 152
+DLS NN SG IP
Sbjct: 708 EIDLSNNNLSGPIP 721
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 98 NRFTGPVP--SLSNLTALKLLFLSHNNFNGEFPDSVSSL-FRLYRLDLSFNNFSGQI--P 152
N F+G +P +L + LK+L LS N F+GE P+S+++L L LDLS NNFSG I
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 153 XXXXXXXXXXXXXXEANRFSG--PITGLDLRNLQDFNVSGNHLSGQIPKSL 201
+ N F+G P T + L ++S N+LSG IP SL
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 62 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILY 116
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ ++ DFGLS + ST +++
Sbjct: 117 AYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG 172
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 173 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -XKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 125
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 126 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 185 -XKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 83 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFG + + + G + P L
Sbjct: 136 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 119
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 120 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 179 -CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR-TPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 62 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILY 116
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ ++ DFGLS + ST +++
Sbjct: 117 AYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 173 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 121
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 122 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 181 -CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 120
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 121 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 180 -CKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 136
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------- 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P
Sbjct: 137 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L R RH N++G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 94
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 137
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS-------- 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P
Sbjct: 138 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 230
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L +++ MP G L + H + + L+W ++ A+G+ ++
Sbjct: 88 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFG + + + G + P L
Sbjct: 141 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + LV E++ ++ PL + ++ +GLAF
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLAF---- 121
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSD 535
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG- 180
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 119
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 120 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 179 -CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 119
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 120 -CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 179 -CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + LV E++ ++ PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL----LQGLAF---- 118
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSD 535
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG- 177
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGL--- 421
+G+G F T YK + + +V VA L+D + ++ F++ E L L+HPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 422 -KAYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
++ ++ +LV+E +G+L +L + W ++ +GL F+H
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH- 146
Query: 480 TCKSLKLTHGNIKSTNVLLDK-TGNARVSDFGLSIFAPPSTVPRSNG---YRAPELSSSD 535
++ + H ++K N+ + TG+ ++ D GL+ S G + APE
Sbjct: 147 -TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEE- 204
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
K + DVY+FG LE T + P
Sbjct: 205 --KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGR 412
RF++E M G+G FGT G VA+K++ RE Q M+ L
Sbjct: 24 RFQVE-------RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLAV 75
Query: 413 LRHPNLVGLKAYYFAREEKL-------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
L HPN+V L++Y++ E+ +V EY+P+ +L P ++
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVF 134
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT-GNARVSDFG----LSIFAPPSTV 520
+ R + +H S+ + H +IK NVL+++ G ++ DFG LS P
Sbjct: 135 LFQ-LIRSIGCLHLP--SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 521 PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
S YRAPEL + + + D++S G + E++ G+
Sbjct: 192 ICSRYYRAPELIFGN-QHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 120
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 121 -CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 180 -CKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 125
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 126 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 185 -CKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 39/212 (18%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VAVK + + ++ + + ++ L HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ LV EY G +F L HG + K A R + C
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-----------MKEKEARAKFRQIVSAVQYCH 130
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS------------IFAPPSTVPRSNGYRAPE 530
+ H ++K+ N+LLD N +++DFG S APP Y APE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP--------YAAPE 182
Query: 531 LSSSDGRK-QSQKSDVYSFGVLLLELLTGKCP 561
L G+K + DV+S GV+L L++G P
Sbjct: 183 LFQ--GKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 122
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 123 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 182 -CKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 122
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 123 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 182 -CKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 119
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 120 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 179 -CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK-----DASIGGKREFEQ 405
+ R+EL E+LG GG + A L D VAVK L+ D S F +
Sbjct: 11 SDRYEL-------GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSF--YLRFRR 61
Query: 406 HMEVLGRLRHPNLVGL----KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ L HP +V + +A A +V EY+ +L ++H P+
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPK 116
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518
+++ A A + L F H + H ++K N+L+ T +V DFG++ S
Sbjct: 117 RAIEVIADACQALNFSHQN----GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
V + Y +PE + D +SDVYS G +L E+LTG+ P
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA++++ + +R + +++L R RH N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 136
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 137 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 229
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 137
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFG + + + G + P L
Sbjct: 138 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 30/222 (13%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAV----LDDGSVVAVKRLKDASIGGKREFEQHME- 408
R E +LLR +LGKGG+G ++ + G + A+K LK A I + H +
Sbjct: 15 RPECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 409 ---VLGRLRHPNLVGLKAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL 464
+L ++HP +V L Y F KL L+ EY+ G LF L ++ T
Sbjct: 71 ERNILEEVKHPFIVDL-IYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACF 125
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL---SIF--APPST 519
+A + +A H K + + ++K N++L+ G+ +++DFGL SI T
Sbjct: 126 YLAEIS---MALGHLHQKGI--IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180
Query: 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ Y APE+ G ++ D +S G L+ ++LTG P
Sbjct: 181 FCGTIEYMAPEILMRSGHNRA--VDWWSLGALMYDMLTGAPP 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 121
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 122 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 181 -CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 44/225 (19%)
Query: 366 EMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR--LRHPNLVGLK 422
E+ +G FG +KA +++D V + L+D K+ ++ E+ ++H NL+
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQD-----KQSWQSEREIFSTPGMKHENLL--- 72
Query: 423 AYYFAREEK--------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL 474
+ A E++ L++ + GSL L GN + W +A +RGL
Sbjct: 73 -QFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGL 125
Query: 475 AFIHFTCKSLK-------LTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVP------ 521
+++H + + H + KS NVLL A ++DFGL++ P P
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ 185
Query: 522 -RSNGYRAPEL---SSSDGRKQSQKSDVYSFGVLLLELLTGKCPS 562
+ Y APE+ + + R + D+Y+ G++L EL++ +C +
Sbjct: 186 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS-RCKA 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++L G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 88 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFGL+ + + G + P L
Sbjct: 141 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFG + + + G + P L
Sbjct: 136 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 368 LGKGGFGTAYKAVLDD------GSVVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y+ D + VAVK + + AS+ + EF V+ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L+V E M +G L L R PGR P +++AA A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ + K H ++ + N ++ ++ DFG++ + R G + A
Sbjct: 144 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLEL 555
PE S DG + SD++SFGV+L E+
Sbjct: 200 PE-SLKDG-VFTTSSDMWSFGVVLWEI 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VAV+ + + ++ + + ++ L HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ LV EY G +F L HG + K A R + C
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-----------MKEKEARAKFRQIVSAVQYCH 130
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS---IFAPP-STVPRSNGYRAPELSSSDGRK 538
+ H ++K+ N+LLD N +++DFG S F T S Y APEL G+K
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ--GKK 188
Query: 539 -QSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L L++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 39/212 (18%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIG--GKREFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VA+K + + ++ + + ++ L HPN+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ L+ EY G +F L HG + K A R + C
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGR-----------MKEKEARSKFRQIVSAVQYCH 131
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS------------IFAPPSTVPRSNGYRAPE 530
++ H ++K+ N+LLD N +++DFG S APP Y APE
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP--------YAAPE 183
Query: 531 LSSSDGRK-QSQKSDVYSFGVLLLELLTGKCP 561
L G+K + DV+S GV+L L++G P
Sbjct: 184 LFQ--GKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVV----AVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLV 419
++LG G FGT YK + + +G V A+K L++A S +E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L +L++ + MP G L + H + + L+W ++ A+G+ ++
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNGYRAP----ELS 532
+ +L H ++ + NVL+ + +++DFG + + + G + P L
Sbjct: 136 ----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLT 557
S R + +SDV+S+GV + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + LV E++ ++ PL + ++ +GLAF
Sbjct: 66 LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLAF---- 117
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSD 535
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG- 176
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 121
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 122 -CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 181 -CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 61
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 62 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILY 116
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ ++ DFGLS + ST +++
Sbjct: 117 AYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 173 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + LV E++ ++ PL + ++ +GLAF
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL----LQGLAF---- 121
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSD 535
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG- 180
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 68 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 119
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 120 -CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 179 -CKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 93/230 (40%), Gaps = 26/230 (11%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKA 423
MLGKG FG K AVK + AS K + +E+L +L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+V E G LF + R +I G+ ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMH----K 139
Query: 484 LKLTHGNIKSTNVLLD---KTGNARVSDFGLSI-FAPPSTVPRSNG---YRAPELSSSDG 536
+ H ++K N+LL+ K + ++ DFGLS F + + G Y APE+
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-- 197
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G P + D DLP+W
Sbjct: 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 365 AEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ LV E++ ++ PL + ++ +GLAF C
Sbjct: 70 LDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL----LQGLAF----C 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSDG 536
S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-C 180
Query: 537 RKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 4 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 63
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 64 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILY 118
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ ++ DFGLS + ST +++
Sbjct: 119 AYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 174
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 175 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK-----DASIGGKREFEQ 405
+ R+EL E+LG GG + A L D VAVK L+ D S F +
Sbjct: 11 SDRYEL-------GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSF--YLRFRR 61
Query: 406 HMEVLGRLRHPNLVGL----KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ L HP +V + +A A +V EY+ +L ++H P+
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPK 116
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518
+++ A A + L F H + H ++K N+++ T +V DFG++ S
Sbjct: 117 RAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
V + Y +PE + D +SDVYS G +L E+LTG+ P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 70 LLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAF--- 121
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 122 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 181 -CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF 426
LG+G +G K + G ++AVKR++ A++ + + M++ +R + +Y
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 427 A--REEKLLVSEYMPNGSLFWLLHGNRGPGRT-PLDWTTRLKIAAGAARGLAFIHFTCKS 483
A RE + + + + SL G+T P D KIA + L +H
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG--KIAVSIVKALEHLH---SK 128
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG----YRAPELSSSDGRKQ 539
L + H ++K +NVL++ G ++ DFG+S + + Y APE + + ++
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 540 --SQKSDVYSFGVLLLELLTGKCP 561
S KSD++S G+ ++EL + P
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFP 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VAV+ + + ++ + + ++ L HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ LV EY G +F L HG + K A R + C
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-----------MKEKEARAKFRQIVSAVQYCH 130
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG---YRAPELSSSDGRK 538
+ H ++K+ N+LLD N +++DFG S F + + G Y APEL G+K
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQ--GKK 188
Query: 539 -QSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S GV+L L++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK-----DASIGGKREFEQ 405
+ R+EL E+LG GG + A L D VAVK L+ D S F +
Sbjct: 11 SDRYEL-------GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSF--YLRFRR 61
Query: 406 HMEVLGRLRHPNLVGL----KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ L HP +V + +A A +V EY+ +L ++H P+
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPK 116
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518
+++ A A + L F H + H ++K N+++ T +V DFG++ S
Sbjct: 117 RAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
V + Y +PE + D +SDVYS G +L E+LTG+ P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 368 LGKGGFGTAYKAVLDDGS--VVAVK---RLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
+G G FG A + + D S +VAVK R + + KRE H LRHPN+V K
Sbjct: 27 IGSGNFGVA-RLMRDKQSNELVAVKYIERGEKIAANVKREIINHRS----LRHPNIVRFK 81
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL--KIAAGAARGLAFIHFT 480
+V EY G LF + GR D ++ +G +
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS--------Y 130
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNAR--VSDFGLS----IFAPPSTVPRSNGYRAPEL--- 531
C ++++ H ++K N LLD + R + DFG S + + P + + Y APE+
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
DG+ +DV+S GV L +L G P
Sbjct: 191 KEYDGK----VADVWSCGVTLYVMLVGAYP 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVGL--- 421
+G+G +G A + V VA+K++ + +R + +++L R RH N++G+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 109
Query: 422 -KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
+A + + + + ++ L+ LL + ++ RGL +IH
Sbjct: 110 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 161
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------STVPRSNGYRAPELS 532
S + H ++K +N+LL+ T + ++ DFGL+ A P + + YRAPE+
Sbjct: 162 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 533 -SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+S G +S D++S G +L E+L+ +
Sbjct: 220 LNSKGYTKS--IDIWSVGCILAEMLSNR 245
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 29/209 (13%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG ++ V G V K + K + + ++ +L HP L+ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+ + E +L+ E++ G LF D A + ++ C+ L
Sbjct: 117 FEDKYEMVLILEFLSGGELF--------------DRIAAEDYKMSEAEVINYMRQACEGL 162
Query: 485 K------LTHGNIKSTNVLLD--KTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELS 532
K + H +IK N++ + K + ++ DFGL+ P + + + + APE+
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI- 221
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
D +D+++ GVL LL+G P
Sbjct: 222 -VDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKA 423
MLGKG FG K AVK + AS K + +E+L +L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+V E G LF + R +I G+ ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMH----K 139
Query: 484 LKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPPSTVPRSN----GYRAPELSSSDG 536
+ H ++K N+LL+ K + ++ DFGLS +T + Y APE+
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-- 197
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G P + D DLP+W
Sbjct: 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 7 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 66
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 67 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILY 121
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ ++ DFGLS + ST +++
Sbjct: 122 AYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 178 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L R PG L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 212 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 150 TYQLARGMEYL----ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 206 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 5 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 64
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 65 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILY 119
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ ++ DFGLS + ST +++
Sbjct: 120 AYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 176 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 30/222 (13%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAV----LDDGSVVAVKRLKDASIGGKREFEQHME- 408
R E +LLR +LGKGG+G ++ + G + A+K LK A I + H +
Sbjct: 15 RPECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 409 ---VLGRLRHPNLVGLKAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL 464
+L ++HP +V L Y F KL L+ EY+ G LF L ++ T
Sbjct: 71 ERNILEEVKHPFIVDL-IYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACF 125
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL---SIFAPPST-- 519
+A + +A H K + + ++K N++L+ G+ +++DFGL SI T
Sbjct: 126 YLAEIS---MALGHLHQKGI--IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX 180
Query: 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ Y APE+ G ++ D +S G L+ ++LTG P
Sbjct: 181 FCGTIEYMAPEILMRSGHNRA--VDWWSLGALMYDMLTGAPP 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 39/212 (18%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKAY 424
+GKG F A + G VAVK + + ++ + + + L HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 425 YFAREEKLLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ LV EY G +F L HG + K A R + C
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGR-----------XKEKEARAKFRQIVSAVQYCH 130
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS------------IFAPPSTVPRSNGYRAPE 530
+ H ++K+ N+LLD N +++DFG S APP Y APE
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP--------YAAPE 182
Query: 531 LSSSDGRK-QSQKSDVYSFGVLLLELLTGKCP 561
L G+K + DV+S GV+L L++G P
Sbjct: 183 LFQ--GKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 93/230 (40%), Gaps = 26/230 (11%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK--REFEQHMEVLGRLRHPNLVGLKA 423
MLGKG FG K AVK + AS K + +E+L +L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+V E G LF + R +I G+ ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMH----K 139
Query: 484 LKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDG 536
+ H ++K N+LL+ K + ++ DFGLS +T + + Y APE+
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-- 197
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP----SVIDXXXXXXXXXXXVDLPRW 582
+K DV+S GV+L LL+G P + D DLP+W
Sbjct: 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 155 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 211 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR-LRHPNLVGLKAYY 425
+G+G G A V G +VAVK++ D +RE + V+ R +H N+V + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF--TCKS 483
+E +V E++ G+L T + TR+ AA LA + +
Sbjct: 96 LVGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA 143
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGR 537
+ H +IKS ++LL G ++SDFG VPR + APEL S
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISR--L 200
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G++++E++ G+ P
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 345 SMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF 403
+V G R L++ ++ +G+G G A V G +VAVK++ D +RE
Sbjct: 21 QLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL 74
Query: 404 EQHMEVLGR-LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTT 462
+ V+ R +H N+V + Y +E +V E++ G+L T + T
Sbjct: 75 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL------------TDIVTHT 122
Query: 463 RLKIAAGAARGLAFIHF--TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV 520
R+ AA LA + + + H +IKS ++LL G ++SDFG V
Sbjct: 123 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEV 181
Query: 521 PRSNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PR + APEL S + D++S G++++E++ G+ P
Sbjct: 182 PRRKXLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR-LRHPNLVGLKAYY 425
+G+G G A V G +VAVK++ D +RE + V+ R +H N+V + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF--TCKS 483
+E +V E++ G+L T + TR+ AA LA + +
Sbjct: 87 LVGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA 134
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGR 537
+ H +IKS ++LL G ++SDFG VPR + APEL S
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISR--L 191
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G++++E++ G+ P
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+K RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GL+F
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLSF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 209 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 265 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 21/205 (10%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLR-HPNLVGL 421
+LGKG FG A V + G + AVK LK I + E M +L R HP L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + V E++ G L + + +R D AA L F+H
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-----FDEARARFYAAEIISALMFLH--- 141
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA-----PPSTVPRSNGYRAPELSSSDG 536
+ + ++K NVLLD G+ +++DFG+ +T + Y APE+
Sbjct: 142 -DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE-- 198
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
D ++ GVLL E+L G P
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGR-LRHPNLVGLKAYY 425
+G+G G A V G +VAVK++ D +RE + V+ R +H N+V + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF--TCKS 483
+E +V E++ G+L T + TR+ AA LA + +
Sbjct: 91 LVGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA 138
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGR 537
+ H +IKS ++LL G ++SDFG VPR + APEL S
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISR--L 195
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G++++E++ G+ P
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ EY G+L L R PG R P + T + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 152 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 208 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 145
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + + T+ + Y APE+ S G ++
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKA- 204
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 205 -VDWWALGVLIYEMAAGYPPFFAD 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 368 LGKGGFGTAY---KAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
LG G +G V + + R S + + + VL L HPN++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 425 YFAREEKLLVSEYMPNGSLF-WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ + LV E G LF ++H R + I G+ ++H
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIH------RMKFNEVDAAVIIKQVLSGVTYLH----K 154
Query: 484 LKLTHGNIKSTNVLLD---KTGNARVSDFGLS-IFAPPSTVPRSNG---YRAPELSSSDG 536
+ H ++K N+LL+ K ++ DFGLS +F + G Y APE+
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR--- 211
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
+K +K DV+S GV+L LL G P
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 345 SMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF 403
+V G R L++ ++ +G+G G A V G +VAVK++ D +RE
Sbjct: 141 QLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL 194
Query: 404 EQHMEVLGR-LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTT 462
+ V+ R +H N+V + Y +E +V E++ G+L ++ R ++
Sbjct: 195 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQ 248
Query: 463 RLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR 522
+ + L+ +H + + H +IKS ++LL G ++SDFG VPR
Sbjct: 249 IAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPR 303
Query: 523 SNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ APEL S + D++S G++++E++ G+ P
Sbjct: 304 RKXLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQH 406
T+ +E++ +G+G FG ++ + + VA+K K+ + RE F Q
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 441
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+ + HP++V L ++ E G L L + LD + +
Sbjct: 442 ALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILY 496
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-- 524
A + LA++ +S + H +I + NVL+ ++ DFGLS + ST +++
Sbjct: 497 AYQLSTALAYL----ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 525 ----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ APE S + R+ + SDV+ FGV + E+L
Sbjct: 553 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L R PG L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 212 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG ++ G+ A K + K + ++ + LRHP LV L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+ E +++ E+M G LF + + ++ +GL +H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHEN---- 168
Query: 485 KLTHGNIKSTNVLL--DKTGNARVSDFGLSI-FAPPSTVPRSNG---YRAPELSSSDGRK 538
H ++K N++ ++ ++ DFGL+ P +V + G + APE+ ++G+
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV--AEGKP 226
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
+D++S GVL LL+G P
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSP 249
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 345 SMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF 403
+V G R L++ ++ +G+G G A V G +VAVK++ D +RE
Sbjct: 64 QLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL 117
Query: 404 EQHMEVLGR-LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTT 462
+ V+ R +H N+V + Y +E +V E++ G+L T + T
Sbjct: 118 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL------------TDIVTHT 165
Query: 463 RLKIAAGAARGLAFIHF--TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV 520
R+ AA LA + + + H +IKS ++LL G ++SDFG V
Sbjct: 166 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEV 224
Query: 521 PRSNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PR + APEL S + D++S G++++E++ G+ P
Sbjct: 225 PRRKXLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L R PG L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 141 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 197 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 366 EMLGKGGFG---TAYKAVLDDGSVVAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG 420
+ +G+G +G +AY V + VA+K++ + +R + +++L R RH N++G
Sbjct: 49 QYIGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLRE-IQILLRFRHENVIG 105
Query: 421 ----LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
L+A + + + + L+ LL + + ++ RGL +
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQI------LRGLKY 159
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------STVPRSNGYRA 528
IH S + H ++K +N+L++ T + ++ DFGL+ A P + + YRA
Sbjct: 160 IH----SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 529 PELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
PE+ +S G +S D++S G +L E+L+ +
Sbjct: 216 PEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 160
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + + T+ + Y APE+ S G ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKA- 219
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 368 LGKGGFGTAYKAVLDDGS--VVAVKRLK-----DASIGGKREFEQHMEVLGRLRHPNLVG 420
+G G FG A + + D S +VAVK ++ D ++ KRE H LRHPN+V
Sbjct: 26 IGSGNFGVA-RLMRDKQSNELVAVKYIERGEKIDENV--KREIINHRS----LRHPNIVR 78
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL--KIAAGAARGLAFIH 478
K +V EY G LF + GR D ++ +G +
Sbjct: 79 FKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS------- 128
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNAR--VSDFGLS----IFAPPSTVPRSNGYRAPEL- 531
C ++++ H ++K N LLD + R + DFG S + + P + + Y APE+
Sbjct: 129 -YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 532 --SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
DG+ +DV+S GV L +L G P
Sbjct: 188 LKKEYDGK----VADVWSCGVTLYVMLVGAYP 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L RH N++G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLAFRHENIIGINDI 91
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 134
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 135 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L R PG L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 145 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 201 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 368 LGKGGFGTAYKAVL----DDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHPNLVGLK 422
+G+G FG ++ + + VA+K K+ + RE F Q + + HP++V L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
++ E G L L + LD + + A + LA++ +
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYL----E 125
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN------GYRAPELSSSDG 536
S + H +I + NVL+ ++ DFGLS + ST +++ + APE S +
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE--SINF 183
Query: 537 RKQSQKSDVYSFGVLLLELL 556
R+ + SDV+ FGV + E+L
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EYMP
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGDMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 368 LGKGGFGTAYKAVLDDGSV-VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVG---- 420
+G+G +G A + V VA+K++ + +R + +++L RH N++G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLAFRHENIIGINDI 91
Query: 421 --------LKAYYFARE------EKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKI 466
+K Y ++ KLL ++++ N + + L+
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------------- 134
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPP--------S 518
RGL +IH S + H ++K +N+LL+ T + ++ DFGL+ A P +
Sbjct: 135 ---ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 519 TVPRSNGYRAPELS-SSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ YRAPE+ +S G +S D++S G +L E+L+ +
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKS--IDIWSVGCILAEMLSNR 227
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E LG G FG ++ G+ A K + K + ++ + LRHP LV L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+ E +++ E+M G LF + + ++ +GL +H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMHEN---- 274
Query: 485 KLTHGNIKSTNVLL--DKTGNARVSDFGLSI-FAPPSTVPRSNG---YRAPELSSSDGRK 538
H ++K N++ ++ ++ DFGL+ P +V + G + APE+ ++G+
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV--AEGKP 332
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
+D++S GVL LL+G P
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EYMP
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGDMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 175 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + +E E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFGL+ T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+ RL + G + + +L L HPN+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR-TPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 118
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 119 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 178 -CKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 364 SAEMLGKGGFGTAYKAVLD-DGSVVAVK--RLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E +G+G +G YKA G VVA+ RL + G + + +L L HPN+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR-TPLDWTTRLKIAAGAARGLAFIHF 479
L + LV E++ + L + + G PL + ++ +GLAF
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAF--- 117
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSS 534
C S ++ H ++K N+L++ G +++DFGL+ F P YRAPE+
Sbjct: 118 -CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKC 560
+ S D++S G + E++T +
Sbjct: 177 -CKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINAMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 175
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 176 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L R PG L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 149 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 205 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMXGTLPYVA 175
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 176 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 33/190 (17%)
Query: 385 SVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSL 443
S V+ L++A++ + +++L ++ HPN++ LK Y LV + M G L
Sbjct: 59 SAEEVQELREATL-------KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGL--AFIHFTC--KSLKLTHGNIKSTNVLLD 499
F L T ++ ++ R + A + C L + H ++K N+LLD
Sbjct: 112 FDYL-------------TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 500 KTGNARVSDFGLSIFAPPSTVPRSN----GYRAPEL---SSSDGRK-QSQKSDVYSFGVL 551
N +++DFG S P RS Y APE+ S +D ++ D++S GV+
Sbjct: 159 DDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 552 LLELLTGKCP 561
+ LL G P
Sbjct: 219 MYTLLAGSPP 228
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMXGTLPYVA 174
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 175 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLK 422
+LGKGGFG V G + A K+L+ I G+ ++L ++ +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 423 AYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
Y ++ LV M G L F + H G+ + AA GL +H
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHM----GQAGFPEARAVFYAAEICCGLEDLH--- 303
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN----GYRAPELSSSDGR 537
++ + ++K N+LLD G+ R+SD GL++ P + GY APE+ ++
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE-- 360
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ + D ++ G LL E++ G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L R PG L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 212 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 175
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 176 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 354 RFELEDLLRASAEMLGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFE 404
R+EL + LG+G FG A LD + VAVK LK DA+ +
Sbjct: 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 122
Query: 405 QHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------- 454
ME++ + +H N++ L ++ EY G+L L R PG
Sbjct: 123 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 182
Query: 455 --RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512
L + A ARG+ ++ S K H ++ + NVL+ + +++DFGL+
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 513 --IFAPPSTVPRSNG-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
I +NG + APE + R + +SDV+SFGVLL E+ T
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 175 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L R PG L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 148 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 204 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 402 EFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL------FWLLHGNRGPGR 455
+F+ ++++ +++ + + +E ++ EYM N S+ F++L N
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF- 147
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515
P+ I ++IH + H ++K +N+L+DK G ++SDFG S +
Sbjct: 148 IPIQVIKC--IIKSVLNSFSYIH---NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 516 PPSTVPRSNG---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ S G + PE S++ K D++S G+ L + P
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 175 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNLVGLK 422
+LGKGGFG V G + A K+L+ I G+ ++L ++ +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 423 AYYFAREEKLLVSEYMPNGSL-FWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
Y ++ LV M G L F + H G+ + AA GL +H
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHM----GQAGFPEARAVFYAAEICCGLEDLH--- 303
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN----GYRAPELSSSDGR 537
++ + ++K N+LLD G+ R+SD GL++ P + GY APE+ ++
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE-- 360
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ + D ++ G LL E++ G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + +E E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFGL+ T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 175 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 341 YERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTA-YKAVLDDGSVVAVKRLKDASIGG 399
Y +G MV + ++ L G+GGF L DG A+KR+
Sbjct: 18 YFQGHMVIIDNKHYLFIQKL--------GEGGFSYVDLVEGLHDGHFYALKRILCHEQQD 69
Query: 400 KREFEQHMEVLGRLRHPNLVGLKAYYF----AREEKLLVSEYMPNGSLFWLLHGNRGPGR 455
+ E ++ ++ HPN++ L AY A+ E L+ + G+L+ + + G
Sbjct: 70 REEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN 129
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515
L L + G RGL IH + H ++K TN+LL G + D G S+
Sbjct: 130 F-LTEDQILWLLLGICRGLEAIH----AKGYAHRDLKPTNILLGDEGQPVLMDLG-SMNQ 183
Query: 516 PPSTVPRSN---------------GYRAPELSSSDGR-KQSQKSDVYSFGVLLLELLTGK 559
V S YRAPEL S +++DV+S G +L ++ G+
Sbjct: 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
Query: 560 CP 561
P
Sbjct: 244 GP 245
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKT---GNARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 175
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 176 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 175 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 22/224 (9%)
Query: 347 VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRL--KDASIGGKREFE 404
++F+GT ++DL + LG G FG + + V + KD S + E
Sbjct: 14 LYFQGT----IDDLFIFKRK-LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE 68
Query: 405 QHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL 464
+EVL L HPN++ + + +V E G L + + G+ L
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGYVA 127
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT---GNARVSDFGLS-IFAPPSTV 520
++ LA+ H S + H ++K N+L T ++ DFGL+ +F
Sbjct: 128 ELMKQMMNALAYFH----SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 521 PRSNG---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ G Y APE+ D + K D++S GV++ LLTG P
Sbjct: 184 TNAAGTALYMAPEVFKRD---VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMXGTLPYVA 174
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 175 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PEL ++ DV+S G++L +L G+ P
Sbjct: 175 PELLKR-REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 175
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 176 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 175 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 40/220 (18%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P+ V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASP 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 68
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 120
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 121 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 173
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 174 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 35/243 (14%)
Query: 331 SSPYPAQQAGYERGSMVFFEGTKR-FELEDLLRASAEMLGKGGFGTAYKAVL-DDGSVVA 388
SSP PA+ Y + E TK +E+ + R + +G G +G AV G+ VA
Sbjct: 2 SSPPPARSGFYRQ------EVTKTAWEVRAVYR-DLQPVGSGAYGAVCSAVDGRTGAKVA 54
Query: 389 VKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKL-------LVSEYM 438
+K+L + + KR + + + +L +RH N++GL F +E L LV +M
Sbjct: 55 IKKLYRPFQSELFAKRAYRE-LRLLKHMRHENVIGLLDV-FTPDETLDDFTDFYLVMPFM 112
Query: 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL 498
+ H G R + +GL +IH + + H ++K N+ +
Sbjct: 113 GTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYIH----AAGIIHRDLKPGNLAV 161
Query: 499 DKTGNARVSDFGLSIFAPPSTVPR--SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
++ ++ DFGL+ A + YRAPE+ + R +Q D++S G ++ E++
Sbjct: 162 NEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMR-YTQTVDIWSVGCIMAEMI 220
Query: 557 TGK 559
TGK
Sbjct: 221 TGK 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 175
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 176 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 175
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 176 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 70
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 175
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 176 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 128/322 (39%), Gaps = 71/322 (22%)
Query: 356 ELEDLLRASAE-----MLGKGGFGTAYKAVL--DDGSVV--AVKRLKDASIGGK--REFE 404
+LED+L + MLGKG FG+ +A L +DGS V AVK LK I EF
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 405 QHMEVLGRLRHPNLVGLKAYYFAREEK------LLVSEYMPNGSLFWLLHGNR---GPGR 455
+ + HP++ L K +++ +M +G L L +R P
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515
PL T ++ A G+ ++ S H ++ + N +L + V+DFGLS
Sbjct: 134 LPLQ--TLVRFMVDIACGMEYL----SSRNFIHRDLAARNCMLAEDMTVCVADFGLS--- 184
Query: 516 PPSTVPRSNGYRAP----------ELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV- 563
+ + YR L S + SDV++FGV + E++T G+ P
Sbjct: 185 --RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
Query: 564 IDXXXXXXXXXXXVDLPRWVQSVVREEWTAEVFDLEL--MRYKDIEEEMVGLLQVAMACT 621
I+ AE+++ + R K E M + + C
Sbjct: 243 IE--------------------------NAEIYNYLIGGNRLKQPPECMEEVYDLMYQCW 276
Query: 622 SASPDQRPNMSHVVKLIEELRG 643
SA P QRP+ + + +E + G
Sbjct: 277 SADPKQRPSFTCLRMELENILG 298
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 33/190 (17%)
Query: 385 SVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSL 443
S V+ L++A++ + +++L ++ HPN++ LK Y LV + M G L
Sbjct: 59 SAEEVQELREATL-------KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGL--AFIHFTC--KSLKLTHGNIKSTNVLLD 499
F L T ++ ++ R + A + C L + H ++K N+LLD
Sbjct: 112 FDYL-------------TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 500 KTGNARVSDFGLSIFAPPSTVPR----SNGYRAPEL---SSSDGRK-QSQKSDVYSFGVL 551
N +++DFG S P R + Y APE+ S +D ++ D++S GV+
Sbjct: 159 DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 552 LLELLTGKCP 561
+ LL G P
Sbjct: 219 MYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 33/190 (17%)
Query: 385 SVVAVKRLKDASIGGKREFEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSL 443
S V+ L++A++ + +++L ++ HPN++ LK Y LV + M G L
Sbjct: 46 SAEEVQELREATL-------KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 98
Query: 444 FWLLHGNRGPGRTPLDWTTRLKIAAGAARGL--AFIHFTC--KSLKLTHGNIKSTNVLLD 499
F L T ++ ++ R + A + C L + H ++K N+LLD
Sbjct: 99 FDYL-------------TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 145
Query: 500 KTGNARVSDFGLSIFAPPSTVPR----SNGYRAPEL---SSSDGRK-QSQKSDVYSFGVL 551
N +++DFG S P R + Y APE+ S +D ++ D++S GV+
Sbjct: 146 DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 205
Query: 552 LLELLTGKCP 561
+ LL G P
Sbjct: 206 MYTLLAGSPP 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 97 L-YFTFQDDEKLYFGLSYAKNGCLLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 149
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + S+ SD+++ G ++ +L+ G P
Sbjct: 207 TE--KSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMXGTLPYVA 174
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 175 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 138 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 194 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASP 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G +G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMXGTLPYVA 174
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 175 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 128
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 183
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 184 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ Y G+L L R PG R P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----S 160
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 219
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 160
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 219
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 128
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 183
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 184 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 219
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASP 216
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 366 EMLGKGGFG-----TAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG 420
E LG+G FG T YK ++L S R E+ + L LRHP+++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIK 73
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
L + ++V EY G LF + + R D R + + I +
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKK---RMTEDEGRRF-----FQQIICAIEY- 123
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG---YRAPELSSSDG 536
C K+ H ++K N+LLD N +++DFGLS I + + S G Y APE+ +
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK- 182
Query: 537 RKQSQKSDVYSFGVLLLELLTGKCP 561
+ DV+S G++L +L G+ P
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 147 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 203 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 341 YERGSMVFFEGTK-----RFELEDLLRASAEMLGKGGFG-----TAYKAVLDDGSV-VAV 389
YE S F + T+ ++E + LG G FG TA+ +D + VAV
Sbjct: 7 YEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV 66
Query: 390 KRLKDASIGGKRE-FEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSLF--- 444
K LK + ++E ++++ L +H N+V L L+++EY G L
Sbjct: 67 KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 126
Query: 445 -----WLLHGNRGPGRTP----------LDWTTRLKIAAGAARGLAFIHFTCKSLKLTHG 489
+L + PG+ P L+ L ++ A+G+AF+ S H
Sbjct: 127 RRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL----ASKNCIHR 182
Query: 490 NIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG-----YRAPELSSSDGRKQSQK 542
++ + NVLL A++ DFGL+ I + + + N + APE S D Q
Sbjct: 183 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE-SIFDCVYTVQ- 240
Query: 543 SDVYSFGVLLLELLT 557
SDV+S+G+LL E+ +
Sbjct: 241 SDVWSYGILLWEIFS 255
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 368 LGKGGFGTAYKAVLDD--GSVVAVKRL-KDASIGG--KREFEQHMEVLGRLRHPNLVGLK 422
+G G FG A + + D +VAVK + + A+I +RE H LRHPN+V K
Sbjct: 28 IGSGNFGVA-RLMRDKLTKELVAVKYIERGAAIDENVQREIINHRS----LRHPNIVRFK 82
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL--KIAAGAARGLAFIHFT 480
++ EY G L+ + GR D ++ +G +
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERIC---NAGRFSEDEARFFFQQLLSGVS--------Y 131
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNAR--VSDFGLS----IFAPPSTVPRSNGYRAPEL--- 531
C S+++ H ++K N LLD + R + DFG S + + P + + Y APE+
Sbjct: 132 CHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR 191
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
DG+ +DV+S GV L +L G P
Sbjct: 192 QEYDGK----IADVWSCGVTLYVMLVGAYP 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 366 EMLGKGGFGTAYKAVLDD----GSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHPNLVG 420
E LG G F + VL + G + AVK + ++ GK E + VL +++H N+V
Sbjct: 28 ETLGTGAFS---EVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGR---TPLDWTTRLKIAAGAARGLAFI 477
L+ Y + LV + + G LF +R + T D +T ++ A + ++
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELF-----DRIVEKGFYTEKDASTLIRQVLDA---VYYL 136
Query: 478 HFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPP----STVPRSNGYRAPE 530
H + + H ++K N+L D+ +SDFGLS ST + GY APE
Sbjct: 137 H----RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPE 192
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + S+ D +S GV+ LL G P
Sbjct: 193 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 66 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 118 GGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 168
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 226
Query: 558 GKCPSVID 565
G P D
Sbjct: 227 GYPPFFAD 234
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNRG---PGRTPLDWTTR-------LKIAA 468
L L+V E+ G+L L R P +TP D + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 469 GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG- 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I P V + +
Sbjct: 156 QVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 526 ----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLP 580
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 212 LPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------- 250
Query: 581 RWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 251 -YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 66 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 118 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 168
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 226
Query: 558 GKCPSVID 565
G P D
Sbjct: 227 GYPPFFAD 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASP 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 398 GGKREFEQHMEVLGRLRHPNLVGL-KAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGR 455
G + Q + +L +L HPN+V L + E+ L +V E + G + + P
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTL 131
Query: 456 TPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFA 515
PL +G+ ++H+ K+ H +IK +N+L+ + G+ +++DFG+S
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQ----KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 516 PPSTVPRSN-----GYRAPELSSSDGRK--QSQKSDVYSFGVLLLELLTGKCP 561
S SN + APE S S+ RK + DV++ GV L + G+CP
Sbjct: 188 KGSDALLSNTVGTPAFMAPE-SLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L L R G D T A L ++H
Sbjct: 94 L-YFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYLH- 146
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 364 SAEMLGKGGFGTAYK------AVLDDGSVVAVKRLKDASIGGKRE-FEQHMEVLGRLRHP 416
+ E LG G F K + + +R K + G RE E+ + +L ++HP
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
N++ L Y + + +L+ E + G LF L T + T LK G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK---QILNGVYY 129
Query: 477 IHFTCKSLKLTHGNIKSTNV-LLDKTG---NARVSDFGLS-----------IFAPPSTVP 521
+H SL++ H ++K N+ LLD+ ++ DFGL+ IF P V
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV- 184
Query: 522 RSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
APE+ + + ++D++S GV+ LL+G P + D
Sbjct: 185 ------APEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF-----EQHMEVLGRLRHPNLVG 420
++G+GGFG Y D G + A+K L I K+ E+ M L +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 421 LKAYYFAREEKL-LVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
+Y F +KL + + M G L + L HG AA GL +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------YAAEIILGLEHM 308
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-FA--PPSTVPRSNGYRAPELSSS 534
H + + + ++K N+LLD+ G+ R+SD GL+ F+ P ++GY APE+
Sbjct: 309 H----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
G +D +S G +L +LL G P
Sbjct: 365 -GVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF-----EQHMEVLGRLRHPNLVG 420
++G+GGFG Y D G + A+K L I K+ E+ M L +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 421 LKAYYFAREEKL-LVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
+Y F +KL + + M G L + L HG AA GL +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------YAAEIILGLEHM 308
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-FA--PPSTVPRSNGYRAPELSSS 534
H + + + ++K N+LLD+ G+ R+SD GL+ F+ P ++GY APE+
Sbjct: 309 H----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
G +D +S G +L +LL G P
Sbjct: 365 -GVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAVL--------DDGSVVAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A + VAVK LKD A+ + ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--------RTPLDWTTRLKIAAG 469
++ L ++ Y G+L L R PG R P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 470 A---ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVL+ E+ T
Sbjct: 219 GRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 74 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 126 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 176
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 234
Query: 558 GKCPSVID 565
G P D
Sbjct: 235 GYPPFFAD 242
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 153 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 209 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 74 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 126 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 176
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 234
Query: 558 GKCPSVID 565
G P D
Sbjct: 235 GYPPFFAD 242
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 153 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 209 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 95 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 147
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 74 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 126 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 176
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 234
Query: 558 GKCPSVID 565
G P D
Sbjct: 235 GYPPFFAD 242
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 56/238 (23%)
Query: 345 SMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFE 404
SMVF +G E +G G + + V ++ ++ D S KR+
Sbjct: 22 SMVFSDG----------YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPS 68
Query: 405 QHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
+ +E+L R +HPN++ LK Y + LV+E M G L LD R
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL--------------LDKILR 114
Query: 464 LKIAAGAARGLAFI-HFTCKSLK------LTHGNIKSTNVL-LDKTGNA---RVSDFGLS 512
K + R +F+ H K+++ + H ++K +N+L +D++GN R+ DFG +
Sbjct: 115 QKFF--SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 513 ---------IFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ P T + APE+ G + D++S G+LL +L G P
Sbjct: 173 KQLRAENGLLMTPCYTA----NFVAPEVLKRQGYDEG--CDIWSLGILLYTMLAGYTP 224
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF-----EQHMEVLGRLRHPNLVG 420
++G+GGFG Y D G + A+K L I K+ E+ M L +
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 421 LKAYYFAREEKL-LVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
+Y F +KL + + M G L + L HG AA GL +
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------YAAEIILGLEHM 307
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-FA--PPSTVPRSNGYRAPELSSS 534
H + + + ++K N+LLD+ G+ R+SD GL+ F+ P ++GY APE+
Sbjct: 308 H----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 363
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
G +D +S G +L +LL G P
Sbjct: 364 -GVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 146 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 202 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF-----EQHMEVLGRLRHPNLVG 420
++G+GGFG Y D G + A+K L I K+ E+ M L +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 421 LKAYYFAREEKL-LVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
+Y F +KL + + M G L + L HG AA GL +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------YAAEIILGLEHM 308
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-FA--PPSTVPRSNGYRAPELSSS 534
H + + + ++K N+LLD+ G+ R+SD GL+ F+ P ++GY APE+
Sbjct: 309 H----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
G +D +S G +L +LL G P
Sbjct: 365 -GVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 368 LGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGR-LRHPNLVGLKAYY 425
+G+G G A G VAVK++ D +RE + V+ R H N+V + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM-DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK 485
+E +V E++ G+L ++ R ++ + R L+++H +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIATVCLSVLRALSYLH----NQG 161
Query: 486 LTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG------YRAPELSSSDGRKQ 539
+ H +IKS ++LL G ++SDFG VP+ + APE+ S
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQV-SKEVPKRKXLVGTPYWMAPEVISR--LPY 218
Query: 540 SQKSDVYSFGVLLLELLTGKCP 561
+ D++S G++++E++ G+ P
Sbjct: 219 GTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 346 MVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFE 404
MV +G R L+ ++ +G+G G A G VAVK + D +RE
Sbjct: 36 MVVDQGDPRLLLDSYVK-----IGEGSTGIVCLAREKHSGRQVAVK-MMDLRKQQRRELL 89
Query: 405 QHMEVLGR-LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
+ V+ R +H N+V + Y EE ++ E++ G+L ++ R L+
Sbjct: 90 FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQI 143
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRS 523
+ + LA++H + + H +IKS ++LL G ++SDFG VP+
Sbjct: 144 ATVCEAVLQALAYLH----AQGVIHRDIKSDSILLTLDGRVKLSDFGFCA-QISKDVPKR 198
Query: 524 NG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
+ APE+ S + + D++S G++++E++ G+ P D
Sbjct: 199 KXLVGTPYWMAPEVISRS--LYATEVDIWSLGIMVIEMVDGEPPYFSD 244
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 38/228 (16%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK-----DASIGGKREFEQ 405
+ R+EL E+LG GG + A L VAVK L+ D S F +
Sbjct: 11 SDRYEL-------GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF--YLRFRR 61
Query: 406 HMEVLGRLRHPNLVGLKAYYFAREEK----LLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ L HP +V + A A +V EY+ +L ++H P+
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPK 116
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518
+++ A A + L F H + H ++K N+++ T +V DFG++ S
Sbjct: 117 RAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
V + Y +PE + D +SDVYS G +L E+LTG+ P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 75 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 127
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN------GYRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 128 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 185 TE--KSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 368 LGKGGFGTAYKAV---LDDG-----SVVAVKRLK-DASIGGKREFEQHMEVLGRL-RHPN 417
LG+G FG A LD + VAVK LK DA+ + ME++ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPG-----------RTPLDWTTRLKI 466
++ L ++ EY G+L L PG L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
A ARG+ ++ S K H ++ + NVL+ + +++DFGL+ I +N
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
G + APE + R + +SDV+SFGVLL E+ T
Sbjct: 212 GRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 79 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIG--SFDETCTRFYTAEIVSALEYLH- 131
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 132 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 189 TE--KSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 146 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 202 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 144 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 200 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 226
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L L R G D T A L ++H
Sbjct: 94 L-YFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYLH- 146
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 368 LGKGGFGT---AYKAVLDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL 421
+G G +G+ AY A L VAVK+L + I +R + + + +L L+H N++GL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 92
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ SE +L N + D + + RGL +IH
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH--- 148
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQ 539
S + H ++K +NV +++ R+ DFGL+ A + YRAPE+ +
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEI-MLNWMHY 206
Query: 540 SQKSDVYSFGVLLLELLTGKC 560
+Q D++S G ++ ELL GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGKA 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 140 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 196 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 222
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 368 LGKGGFGTAYKAVLDDGS--VVAVKRLK-----DASIGGKREFEQHMEVLGRLRHPNLVG 420
+G G FG A + + D + +VAVK ++ D ++ KRE H LRHPN+V
Sbjct: 27 IGAGNFGVA-RLMRDKQANELVAVKYIERGEKIDENV--KREIINHRS----LRHPNIVR 79
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
K +V EY G LF + GR D G+++ H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFF--FQQLISGVSYAH-- 132
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNAR--VSDFGLS----IFAPPSTVPRSNGYRAPEL--- 531
++++ H ++K N LLD + R ++DFG S + + P + + Y APE+
Sbjct: 133 --AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLK 190
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
DG+ +DV+S GV L +L G P
Sbjct: 191 KEYDGK----VADVWSCGVTLYVMLVGAYP 216
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L L R G D T A L ++H
Sbjct: 72 L-YFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYLH- 124
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN------GYRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 125 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 182 TE--KSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+P
Sbjct: 94 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 145
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 146 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 196
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 197 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 254
Query: 558 GKCPSVID 565
G P D
Sbjct: 255 GYPPFFAD 262
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 143 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 199 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 225
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 147 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 203 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L L R G D T A L ++H
Sbjct: 73 L-YFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYLH- 125
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN------GYRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 126 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 183 TE--KSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 74 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 126
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN------GYRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 127 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 184 TE--KSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 372 GFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEK 431
G A K + ++ ++L++ +RE +V G HP+++ L Y +
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG---HPHIITLIDSYESSSFM 175
Query: 432 LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNI 491
LV + M G LF L + L I ++F+H + H ++
Sbjct: 176 FLVFDLMRKGELFDYL-----TEKVALSEKETRSIMRSLLEAVSFLHAN----NIVHRDL 226
Query: 492 KSTNVLLDKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPEL--SSSDGRK--QSQKS 543
K N+LLD R+SDFG S P R + GY APE+ S D ++
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 544 DVYSFGVLLLELLTGKCP 561
D+++ GV+L LL G P
Sbjct: 287 DLWACGVILFTLLAGSPP 304
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 98 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 150
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N ++ + ++ DFG++ + R G + +
Sbjct: 175 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 231 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 257
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 97 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 149
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 102 L-YFCFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 154
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 155 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 212 TE--KSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 95 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 147
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 95 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 147
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 97 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 149
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 46/217 (21%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAY 424
E +G G + + V ++ ++ D S KR+ + +E+L R +HPN++ LK
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI-HFTCKS 483
Y + LV+E M G L LD R K + R +F+ H K+
Sbjct: 90 YDDGKHVYLVTELMRGGEL--------------LDKILRQKFF--SEREASFVLHTIGKT 133
Query: 484 LK------LTHGNIKSTNVL-LDKTGNA---RVSDFGLS---------IFAPPSTVPRSN 524
++ + H ++K +N+L +D++GN R+ DFG + + P T
Sbjct: 134 VEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA---- 189
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ APE+ G + D++S G+LL +L G P
Sbjct: 190 NFVAPEVLKRQGYDEG--CDIWSLGILLYTMLAGYTP 224
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 97 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 149
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ +S SD+++ G ++ +L+ G P
Sbjct: 207 TEKSAXKS--SDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 95 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 147
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 97 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 149
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 98 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 150
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIH---- 138
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 197
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 34/208 (16%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+G G +G+ A+ G VA+K+L + I KR + + + +L ++H N++GL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGL-- 88
Query: 424 YYFAREEKLLVSEYMPNGSL--FWLLHGNRGPGRTPLDWTTRLKIAAGAA--------RG 473
+ + P SL F+ + +T L LK + +G
Sbjct: 89 ----------LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKG 138
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR--SNGYRAPEL 531
L +IH S + H ++K N+ +++ ++ DFGL+ A + YRAPE+
Sbjct: 139 LKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEV 194
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGK 559
S +Q D++S G ++ E+LTGK
Sbjct: 195 ILS-WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 368 LGKGGFGT---AYKAVLDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL 421
+G G +G+ AY A L VAVK+L + I +R + + + +L L+H N++GL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 92
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ SE +L N + D + + RGL +IH
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH--- 148
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQ 539
S + H ++K +NV +++ R+ DFGL+ A + YRAPE+ +
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEI-MLNWMHY 206
Query: 540 SQKSDVYSFGVLLLELLTGKC 560
+Q D++S G ++ ELL GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGKA 227
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 100 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 152
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 153 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 210 TE--KSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL 421
+ LG+G G A V ++ V + +K A + ++ + + L H N+V
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKF 69
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ + L EY G LF + + G P R A G+ ++H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------------YRA 528
+ +TH +IK N+LLD+ N ++SDFGL +TV R N Y A
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGL------ATVFRYNNRERLLNKMCGTLPYVA 174
Query: 529 PELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
PEL R++ ++ DV+S G++L +L G+ P
Sbjct: 175 PELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK-----DASIGGKREFEQ 405
+ R+EL E+LG GG + A L VAVK L+ D S F +
Sbjct: 11 SDRYEL-------GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF--YLRFRR 61
Query: 406 HMEVLGRLRHPNLVGL----KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ L HP +V + +A A +V EY+ +L ++H P+
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPK 116
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518
+++ A A + L F H + H ++K N+++ T +V DFG++ S
Sbjct: 117 RAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
V + Y +PE + D +SDVYS G +L E+LTG+ P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NAMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 40/212 (18%)
Query: 368 LGKGGFGTAYKAVLDDGS--VVAVKRLK-----DASIGGKREFEQHMEVLGRLRHPNLVG 420
+G G FG A + + D S +VAVK ++ D ++ KRE H LRHPN+V
Sbjct: 27 IGSGNFGVA-RLMRDKQSNELVAVKYIERGEKIDENV--KREIINHRS----LRHPNIVR 79
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL--KIAAGAARGLAFIH 478
K +V EY G LF + GR D ++ +G +
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS------- 129
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNAR--VSDFGLS----IFAPPSTVPRSNGYRAPEL- 531
C ++++ H ++K N LLD + R + FG S + + P + + Y APE+
Sbjct: 130 -YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 532 --SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
DG+ +DV+S GV L +L G P
Sbjct: 189 LKKEYDGK----VADVWSCGVTLYVMLVGAYP 216
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 368 LGKGGFGT---AYKAVLDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL 421
+G G +G+ AY A L VAVK+L + I +R + + + +L L+H N++GL
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 84
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
+ SE +L N + D + + RGL +IH
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH--- 140
Query: 482 KSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQ 539
S + H ++K +NV +++ R+ DFGL+ A + YRAPE+ +
Sbjct: 141 -SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEI-MLNWMHY 198
Query: 540 SQKSDVYSFGVLLLELLTGKC 560
+Q D++S G ++ ELL GK
Sbjct: 199 NQTVDIWSVGCIMAELLQGKA 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 148
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 207
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY P
Sbjct: 74 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 125
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+++D
Sbjct: 126 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLMID 176
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 234
Query: 558 GKCPSVID 565
G P D
Sbjct: 235 GYPPFFAD 242
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 365 AEMLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVG 420
++LG+G F T A L A+K L+ I + + + +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 421 LKAYYFAREEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
L + F +EKL Y NG L + R G D T A L ++H
Sbjct: 97 L-YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGS--FDETCTRFYTAEIVSALEYLH- 149
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSNG------YRAPELS 532
+ H ++K N+LL++ + +++DFG + + +P S R+N Y +PEL
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + + SD+++ G ++ +L+ G P
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 51/280 (18%)
Query: 307 YFWRNYVKNKTRSKLLESEKILYSSSPYPAQQAGYERGSMVFFEGTK-----RFELEDLL 361
Y ++ K + R K++ES YE S F + T+ ++E
Sbjct: 4 YKYKQKPKYQVRWKIIES----------------YEGNSYTFIDPTQLPYNEKWEFPRNN 47
Query: 362 RASAEMLGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL- 413
+ LG G FG TA+ +D + VAVK LK + ++E ++++ L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNR---------GPGRTPLDWTTRL 464
+H N+V L L+++EY G L L + L L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPR 522
++ A+G+AF+ S H ++ + NVLL A++ DFGL+ I + + +
Sbjct: 168 HFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 523 SNG-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
N + APE S D Q SDV+S+G+LL E+ +
Sbjct: 224 GNARLPVKWMAPE-SIFDCVYTVQ-SDVWSYGILLWEIFS 261
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 98
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 152
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 211
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 212 QTVDIWSVGCIMAELLTGR 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 138
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 197
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLK-----DASIGGKREFEQ 405
+ R+EL E+LG GG + A L VAVK L+ D S F +
Sbjct: 28 SDRYEL-------GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF--YLRFRR 78
Query: 406 HMEVLGRLRHPNLVGL----KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ L HP +V + +A A +V EY+ +L ++H P+
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPK 133
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS--- 518
+++ A A + L F H + H ++K N+++ T +V DFG++ S
Sbjct: 134 RAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 519 -----TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
V + Y +PE + D +SDVYS G +L E+LTG+ P
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 138
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML-NWMHYN 197
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 26/236 (11%)
Query: 336 AQQAGYERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDA 395
QQ G RGS + +F ++ E LGKG F + V + ++ +
Sbjct: 10 GQQMG--RGSEFMMNASTKFSDNYDVK---EELGKGAFSVVRRCVHKTTGLEFAAKIINT 64
Query: 396 SIGGKREF---EQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG 452
R+F E+ + +L+HPN+V L LV + + G LF +
Sbjct: 65 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI----- 119
Query: 453 PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDF 509
++ + + + L I + C S + H N+K N+LL K +++DF
Sbjct: 120 ---VAREFYSEADASHCIQQILESIAY-CHSNGIVHRNLKPENLLLASKAKGAAVKLADF 175
Query: 510 GLSIFAPPSTV----PRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
GL+I S + GY +PE+ D S+ D+++ GV+L LL G P
Sbjct: 176 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVGYPP 229
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 368 LGKGGFGTAY----KAVLDDG--SVVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG+G FG Y K V+ D + VA+K + +A S+ + EF V+ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNR-----GPGRTPLDWTTRLKIAAGAARGLA 475
L + L++ E M G L L R P P + +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 476 FIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-------YRA 528
+++ K H ++ + N + + ++ DFG++ + R G + +
Sbjct: 140 YLNAN----KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PE S DG + SDV+SFGV+L E+ T
Sbjct: 196 PE-SLKDGVFTTY-SDVWSFGVVLWEIAT 222
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 147
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 206
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 367 MLGKGGFGTAYKAVLDD----GSVVAVKRLKDASIGGKREFEQHM---EVLGRL-RHPNL 418
+LGKG FG K +L D + A+K LK + + E M VL L + P L
Sbjct: 26 VLGKGSFG---KVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
L + + + V EY+ G L + + G + P + AA + GL F+H
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEP----QAVFYAAEISIGLFFLH 137
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSS 533
+ + ++K NV+LD G+ +++DFG+ V Y APE+ +
Sbjct: 138 ----KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+S D +++GVLL E+L G+ P
Sbjct: 194 YQPYGKS--VDWWAYGVLLYEMLAGQPP 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 347 VFFEGT-KRFELE-DLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREF 403
++F+G + FE++ D L E LG+G +G K + G + AVKR++ A++ + +
Sbjct: 20 LYFQGAXENFEVKADDLEPIXE-LGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVNSQEQK 77
Query: 404 EQHMEVLGRLRHPNLVGLKAYYFA--REEKLLVSEYMPNGSLFWLLHGNRGPGRT-PLDW 460
++ R + +Y A RE + + + + SL G+T P D
Sbjct: 78 RLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDI 137
Query: 461 TTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV 520
KIA + L +H L + H ++K +NVL++ G + DFG+S +
Sbjct: 138 LG--KIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA 192
Query: 521 PRSNG----YRAPELSSSDGRKQ--SQKSDVYSFGVLLLELLTGKCP 561
+ Y APE + + ++ S KSD++S G+ +EL + P
Sbjct: 193 KDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 149
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIML-NWMHYN 208
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 144
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 203
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 41/235 (17%)
Query: 349 FEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-----LDDGSVVAVKRLKDASIGG--KR 401
E K+ ++ED E LG G F K L+ + KR AS G +
Sbjct: 2 METFKQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE 60
Query: 402 EFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
E E+ + +L ++ HPN++ L Y R + +L+ E + G LF L + L
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEE 115
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNV-LLDK---TGNARVSDFGLS----- 512
G+ ++H + K+ H ++K N+ LLDK + ++ DFGL+
Sbjct: 116 EATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 513 ------IFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
IF P V APE+ + + ++D++S GV+ LL+G P
Sbjct: 172 GVEFKNIFGTPEFV-------APEIVNYEP--LGLEADMWSIGVITYILLSGASP 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 94 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 145
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 146 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 196
Query: 500 KTGNARVSDFGLS--IFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + + T+ + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 197 QQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 254
Query: 558 GKCPSVID 565
G P D
Sbjct: 255 GYPPFFAD 262
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 367 MLGKGGFGTAYKAVLDD----GSVVAVKRLKDASIGGKREFEQHMEVLGRL-----RHPN 417
+LGKG FG K +L + + AVK LK + + E M V R+ + P
Sbjct: 27 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPGKPPF 82
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L L + + + V EY+ G L + + G + P + AA A GL F+
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEP----HAVFYAAEIAIGLFFL 137
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL---SIFAPPST--VPRSNGYRAPELS 532
+S + + ++K NV+LD G+ +++DFG+ +I+ +T + Y APE+
Sbjct: 138 ----QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII 193
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ +S D ++FGVLL E+L G+ P
Sbjct: 194 AYQPYGKS--VDWWAFGVLLYEMLAGQAP 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGKC 560
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGRT 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 149
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIML-NWMHYN 208
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 149
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIML-NWMHYN 208
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 148
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 207
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 149
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 208
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 147
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 206
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 87
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 141
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 200
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 201 QTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 161
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 220
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 147
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 206
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 162
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 221
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 368 LGKGGFGTAYKAVLDDGS--VVAVKRLK-----DASIGGKREFEQHMEVLGRLRHPNLVG 420
+G G FG A + + D S +VAVK ++ D ++ KRE H LRHPN+V
Sbjct: 27 IGSGNFGVA-RLMRDKQSNELVAVKYIERGEKIDENV--KREIINHRS----LRHPNIVR 79
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL--KIAAGAARGLAFIH 478
K +V EY G LF + GR D ++ +G +
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS------- 129
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNAR--VSDFGLS----IFAPPSTVPRSNGYRAPEL- 531
C ++++ H ++K N LLD + R + FG S + + P + Y APE+
Sbjct: 130 -YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 532 --SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
DG+ +DV+S GV L +L G P
Sbjct: 189 LKKEYDGK----VADVWSCGVTLYVMLVGAYP 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 147
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 206
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V +E+ G+L L R P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 202 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 241
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 242 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 122/280 (43%), Gaps = 51/280 (18%)
Query: 307 YFWRNYVKNKTRSKLLESEKILYSSSPYPAQQAGYERGSMVFFEGTK-----RFELEDLL 361
Y ++ K + R K++ES YE S F + T+ ++E
Sbjct: 4 YKYKQKPKYQVRWKIIES----------------YEGNSYTFIDPTQLPYNEKWEFPRNN 47
Query: 362 RASAEMLGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL- 413
+ LG G FG TA+ +D + VAVK LK + ++E ++++ L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLF-WLLHGNRGPGRTPL------DWTTR--L 464
+H N+V L L+++EY G L +L +R P +TR L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPR 522
++ A+G+AF+ S H ++ + NVLL A++ DFGL+ I + + +
Sbjct: 168 HFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 523 SNG-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
N + APE S D Q SDV+S+G+LL E+ +
Sbjct: 224 GNARLPVKWMAPE-SIFDCVYTVQ-SDVWSYGILLWEIFS 261
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR--SNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 162
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPR--SNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIML-NWMHYN 221
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 148
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 207
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVG 420
LGKGGF Y+ +D V A K + + + K + + + L +P++VG
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
++ + +V E SL L + + R I +G+ ++H
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLH-- 159
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSD 535
+ ++ H ++K N+ L+ + ++ DFGL+ T+ + Y APE+
Sbjct: 160 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKK 217
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
G S + D++S G +L LL GK P
Sbjct: 218 G--HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 148
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 207
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARG 473
HP LVGL + + V EY+ G L + + R P ++ + +A
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 133
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRA 528
L ++H + + ++K NVLLD G+ +++D+G+ P T G Y A
Sbjct: 134 LNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PE+ G D ++ GVL+ E++ G+ P
Sbjct: 190 PEILR--GEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 144
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 203
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 144
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 203
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 138
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 197
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P L L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 160
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 219
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 139
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 198
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 199 QTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 139
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 198
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 199 QTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 154
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 213
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 154
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 213
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 154
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 213
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P L L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 160
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 219
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P L L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY P G +F L R GR + R AA ++H S
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----S 160
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+++D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 219
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 144
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 203
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 121/297 (40%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V E+ G+L L R P D+ T +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 211 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 250
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 251 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V +E+ G+L L R P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 202 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 241
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 242 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARG 473
HP LVGL + + V EY+ G L + + R P ++ + +A
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 165
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRA 528
L ++H + + ++K NVLLD G+ +++D+G+ P T G Y A
Sbjct: 166 LNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PE+ G D ++ GVL+ E++ G+ P
Sbjct: 222 PEILR--GEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 21/206 (10%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVGLK 422
E LGKG F + V + ++ + R+F E+ + +L+HPN+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
LV + + G LF ++ + + + L I + C
Sbjct: 72 DSIQEESFHYLVFDLVTGGELF--------EDIVAREFYSEADASHCIQQILESIAY-CH 122
Query: 483 SLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSD 535
S + H N+K N+LL K +++DFGL+I S + GY +PE+ D
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
S+ D+++ GV+L LL G P
Sbjct: 183 --PYSKPVDIWACGVILYILLVGYPP 206
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 153
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 212
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 387 VAVKRL--KDASIGGKRE------FEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438
VA+K + + +IG RE E +E+L +L HP ++ +K ++ A E+ +V E M
Sbjct: 38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELM 96
Query: 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR------GLAFIHFTCKSLKLTHGNIK 492
G LF + GN+ RLK A + ++H + H ++K
Sbjct: 97 EGGELFDKVVGNK-----------RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLK 141
Query: 493 STNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDGRKQSQKS-D 544
NVLL ++ +++DFG S +++ R + Y APE+ S G ++ D
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 201
Query: 545 VYSFGVLLLELLTGKCP 561
+S GV+L L+G P
Sbjct: 202 CWSLGVILFICLSGYPP 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 165
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIML-NWMHYN 224
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 387 VAVKRL--KDASIGGKRE------FEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438
VA+K + + +IG RE E +E+L +L HP ++ +K ++ A E+ +V E M
Sbjct: 38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELM 96
Query: 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR------GLAFIHFTCKSLKLTHGNIK 492
G LF + GN+ RLK A + ++H + H ++K
Sbjct: 97 EGGELFDKVVGNK-----------RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLK 141
Query: 493 STNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDGRKQSQKS-D 544
NVLL ++ +++DFG S +++ R + Y APE+ S G ++ D
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 201
Query: 545 VYSFGVLLLELLTGKCP 561
+S GV+L L+G P
Sbjct: 202 CWSLGVILFICLSGYPP 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARG 473
HP LVGL + + V EY+ G L + + R P ++ + +A
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 118
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRA 528
L ++H + + ++K NVLLD G+ +++D+G+ P T G Y A
Sbjct: 119 LNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PE+ G D ++ GVL+ E++ G+ P
Sbjct: 175 PEILR--GEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 165
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 224
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 367 MLGKGGFGTAYKAVLDD----GSVVAVKRLKDASIGGKREFEQHMEVLGRL-----RHPN 417
+LGKG FG K +L + + AVK LK + + E M V R+ + P
Sbjct: 348 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPGKPPF 403
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
L L + + + V EY+ G L + + G + P + AA A GL F+
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEP----HAVFYAAEIAIGLFFL 458
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL---SIFAPPST--VPRSNGYRAPELS 532
+S + + ++K NV+LD G+ +++DFG+ +I+ +T + Y APE+
Sbjct: 459 ----QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII 514
Query: 533 SSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ +S D ++FGVLL E+L G+ P
Sbjct: 515 AYQPYGKS--VDWWAFGVLLYEMLAGQAP 541
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 365 AEMLGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL-RHP 416
++LG G FG TAY S+ VAVK LK+ + +RE ++++ +L H
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 417 NLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGP------------------GRTPL 458
N+V L L+ EY G L L R L
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 459 DWTTRLKIAAGAARGLAFIHF-TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFA 515
+ L A A+G+ F+ F +C H ++ + NVL+ ++ DFGL+ I +
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSC-----VHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 516 PPSTVPRSNG-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ V R N + APE S +G + KSDV+S+G+LL E+ +
Sbjct: 225 DSNYVVRGNARLPVKWMAPE-SLFEG-IYTIKSDVWSYGILLWEIFS 269
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 387 VAVKRL--KDASIGGKRE------FEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438
VA+K + + +IG RE E +E+L +L HP ++ +K ++ A E+ +V E M
Sbjct: 37 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELM 95
Query: 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR------GLAFIHFTCKSLKLTHGNIK 492
G LF + GN+ RLK A + ++H + H ++K
Sbjct: 96 EGGELFDKVVGNK-----------RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLK 140
Query: 493 STNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDGRKQSQKS-D 544
NVLL ++ +++DFG S +++ R + Y APE+ S G ++ D
Sbjct: 141 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 200
Query: 545 VYSFGVLLLELLTGKCP 561
+S GV+L L+G P
Sbjct: 201 CWSLGVILFICLSGYPP 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 44/242 (18%)
Query: 343 RGSMVFFEGTKRFELEDLLRASAEM---------LGKGGFGTAYKAV-LDDGSVVAVKRL 392
RGSM K F +D+ + + E+ +G G +G+ A+ G VA+K+L
Sbjct: 17 RGSMSLIR-KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL 75
Query: 393 K---DASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSL--FWLL 447
+ I KR + + + +L ++H N++GL + + P SL F+
Sbjct: 76 SRPFQSEIFAKRAYRELL-LLKHMQHENVIGL------------LDVFTPASSLRNFYDF 122
Query: 448 HGNRGPGRTPLDWTTRLKIAAGAA--------RGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
+ +T L ++ + +GL +IH S + H ++K N+ ++
Sbjct: 123 YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVN 178
Query: 500 KTGNARVSDFGLSIFAPPSTVPR--SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ ++ DFGL+ A + YRAPE+ S +Q D++S G ++ E+LT
Sbjct: 179 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILS-WMHYNQTVDIWSVGCIMAEMLT 237
Query: 558 GK 559
GK
Sbjct: 238 GK 239
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 21/206 (10%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVGLK 422
E LGKG F + V + ++ + R+F E+ + +L+HPN+V L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
LV + + G LF ++ + + + L I + C
Sbjct: 71 DSIQEESFHYLVFDLVTGGELF--------EDIVAREFYSEADASHCIQQILESIAY-CH 121
Query: 483 SLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSD 535
S + H N+K N+LL K +++DFGL+I S + GY +PE+ D
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
S+ D+++ GV+L LL G P
Sbjct: 182 --PYSKPVDIWACGVILYILLVGYPP 205
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 86
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 140
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 199
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 200 QTVDIWSVGCIMAELLTGR 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 153
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 212
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 387 VAVKRL--KDASIGGKRE------FEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438
VA+K + + +IG RE E +E+L +L HP ++ +K ++ A E+ +V E M
Sbjct: 38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELM 96
Query: 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR------GLAFIHFTCKSLKLTHGNIK 492
G LF + GN+ RLK A + ++H + H ++K
Sbjct: 97 EGGELFDKVVGNK-----------RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLK 141
Query: 493 STNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDGRKQSQKS-D 544
NVLL ++ +++DFG S +++ R + Y APE+ S G ++ D
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 201
Query: 545 VYSFGVLLLELLTGKCP 561
+S GV+L L+G P
Sbjct: 202 CWSLGVILFICLSGYPP 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 21/206 (10%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREF---EQHMEVLGRLRHPNLVGLK 422
E LGKG F + V + ++ + R+F E+ + +L+HPN+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
LV + + G LF ++ + + + L I + C
Sbjct: 72 DSIQEESFHYLVFDLVTGGELF--------EDIVAREFYSEADASHCIQQILESIAY-CH 122
Query: 483 SLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSD 535
S + H N+K N+LL K +++DFGL+I S + GY +PE+ D
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
S+ D+++ GV+L LL G P
Sbjct: 183 --PYSKPVDIWACGVILYILLVGYPP 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 415 HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG-PGRTPLDWTTRLKIAAGAARG 473
HP LVGL + + V EY+ G L + + R P ++ + +A
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 122
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI--FAPPSTVPRSNG---YRA 528
L ++H + + ++K NVLLD G+ +++D+G+ P T G Y A
Sbjct: 123 LNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PE+ G D ++ GVL+ E++ G+ P
Sbjct: 179 PEILR--GEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 162
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 221
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 387 VAVKRL--KDASIGGKRE------FEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYM 438
VA+K + + +IG RE E +E+L +L HP ++ +K ++ A E+ +V E M
Sbjct: 44 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELM 102
Query: 439 PNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR------GLAFIHFTCKSLKLTHGNIK 492
G LF + GN+ RLK A + ++H + H ++K
Sbjct: 103 EGGELFDKVVGNK-----------RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLK 147
Query: 493 STNVLL---DKTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSDGRKQSQKS-D 544
NVLL ++ +++DFG S +++ R + Y APE+ S G ++ D
Sbjct: 148 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 207
Query: 545 VYSFGVLLLELLTGKCP 561
+S GV+L L+G P
Sbjct: 208 CWSLGVILFICLSGYPP 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLKA 423
LG G FG ++ G+ A+K L + ++ E + +L + P LV L+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
+ +V EY+ G +F L R GR + R AA ++H S
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----S 159
Query: 484 LKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQ 541
L L + ++K N+L+D+ G +V+DFG + T + + Y APE+ S G ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA- 218
Query: 542 KSDVYSFGVLLLELLTGKCPSVID 565
D ++ GVL+ E+ G P D
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 161
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DFGL+ + YRAPE+ + +
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 220
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Query: 455 RTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-- 512
+ P+ + + ARG+ F+ S K H ++ + N+LL + ++ DFGL+
Sbjct: 193 KEPITMEDLISYSFQVARGMEFL----SSRKCIHRDLAARNILLSENNVVKICDFGLARD 248
Query: 513 IFAPPSTVPRSN-----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDX 566
I+ P V + + + APE S + S KSDV+S+GVLL E+ + G P
Sbjct: 249 IYKNPDYVRKGDTRLPLKWMAPE--SIFDKIYSTKSDVWSYGVLLWEIFSLGGSP----- 301
Query: 567 XXXXXXXXXXVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPD 626
V + S +RE MR + E + Q+ + C P
Sbjct: 302 -------YPGVQMDEDFCSRLREG----------MRMRAPEYSTPEIYQIMLDCWHRDPK 344
Query: 627 QRPNMSHVVKLIEEL 641
+RP + +V+ + +L
Sbjct: 345 ERPRFAELVEKLGDL 359
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 121/297 (40%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V E+ G+L L R P D+ T +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 211 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 250
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 251 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 42/215 (19%)
Query: 366 EMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRL-RHPNLVGLKAY 424
E +G G + + + ++ ++ D S KR+ + +E+L R +HPN++ LK
Sbjct: 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKS---KRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAG--AARGLAFIHFTCK 482
Y + +V+E M G L LD R K + A+ L I T +
Sbjct: 85 YDDGKYVYVVTELMKGGEL--------------LDKILRQKFFSEREASAVLFTITKTVE 130
Query: 483 SLK---LTHGNIKSTNVL-LDKTGN---ARVSDFGLS---------IFAPPSTVPRSNGY 526
L + H ++K +N+L +D++GN R+ DFG + + P T +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA----NF 186
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ G + D++S GVLL +LTG P
Sbjct: 187 VAPEVLERQGYDAA--CDIWSLGVLLYTMLTGYTP 219
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAVL---DDGSVVAVKRLKDAS-IGGKREFEQHMEVLGRL 413
++LL A E LG G FG+ + V VA+K LK + E + +++ +L
Sbjct: 335 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 393
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
+P +V L A E +LV E G L L G R + + ++ + G
Sbjct: 394 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMG 448
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPS-TVPRSNG----- 525
+ ++ + H N+ + NVLL A++SDFGLS + A S RS G
Sbjct: 449 MKYL----EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 504
Query: 526 YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + RK S +SDV+S+GV + E L+
Sbjct: 505 WYAPE--CINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKRE------FEQHMEVLGRLRH 415
++ LG G G A++ + + + +IG RE E +E+L +L H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 416 PNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR--- 472
P ++ +K ++ A E+ +V E M G LF + GN+ RLK A
Sbjct: 214 PCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNK-----------RLKEATCKLYFYQ 261
Query: 473 ---GLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPSTVPR---- 522
+ ++H + H ++K NVLL ++ +++DFG S +++ R
Sbjct: 262 MLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 317
Query: 523 SNGYRAPELSSSDGRKQSQKS-DVYSFGVLLLELLTGKCP 561
+ Y APE+ S G ++ D +S GV+L L+G P
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 43/236 (18%)
Query: 351 GTKRFELEDLLRASAEM---LGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKR----- 401
GT+ + ++ EM LG G F K G A K +K + R
Sbjct: 14 GTENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSR 73
Query: 402 -EFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDW 460
E E+ + +L +RHPN++ L + + + +L+ E + G LF L + L
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTE 128
Query: 461 TTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNV-LLDK-TGNARVS--DFGLS---- 512
+ G+ ++H S ++ H ++K N+ LLDK N R+ DFG++
Sbjct: 129 DEATQFLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 513 -------IFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
IF P V APE+ + + ++D++S GV+ LL+G P
Sbjct: 185 AGNEFKNIFGTPEFV-------APEIVNYE--PLGLEADMWSIGVITYILLSGASP 231
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 365 AEMLGKGGFGT---AYKAVLDDGSVVAVKRLKDASIGGKRE------FEQHMEVLGRLRH 415
++ LG G G A++ + + + +IG RE E +E+L +L H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 416 PNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR--- 472
P ++ +K ++ A E+ +V E M G LF + GN+ RLK A
Sbjct: 200 PCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNK-----------RLKEATCKLYFYQ 247
Query: 473 ---GLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPSTVPR---- 522
+ ++H + H ++K NVLL ++ +++DFG S +++ R
Sbjct: 248 MLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 303
Query: 523 SNGYRAPELSSSDGRKQSQKS-DVYSFGVLLLELLTGKCP 561
+ Y APE+ S G ++ D +S GV+L L+G P
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 366 EMLGKGGFGTAY--KAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E+LG G F + K L G + A+K +K + E + VL +++H N+V L+
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
Y + LV + + G LF +R R + + ++H
Sbjct: 74 IYESTTHYYLVMQLVSGGELF-----DRILERGVYTEKDASLVIQQVLSAVKYLH----E 124
Query: 484 LKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAP---PSTVPRSNGYRAPELSSSDGR 537
+ H ++K N+L ++ ++DFGLS ST + GY APE+ + +
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQ--K 182
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S+ D +S GV+ LL G P
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 68 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 119
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 120 GGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 170
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 171 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 228
Query: 558 GKCPSVID 565
G P D
Sbjct: 229 GYPPFFAD 236
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKR------EFEQHMEVLGRLRHPN 417
E LG G F K G A K +K + R E E+ + +L +RHPN
Sbjct: 17 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
++ L + + + +L+ E + G LF L + L + G+ ++
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYL 131
Query: 478 HFTCKSLKLTHGNIKSTNV-LLDK-TGNARVS--DFGLS-----------IFAPPSTVPR 522
H S ++ H ++K N+ LLDK N R+ DFG++ IF P V
Sbjct: 132 H----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV-- 185
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 186 -----APEIVNYE--PLGLEADMWSIGVITYILLSGASP 217
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ D+GL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 368 LGKGGFGTAYKA--VLDDGSVVAVKRLKDAS------IGGKREFE--QHMEVLGRLRHPN 417
+G+G +G +KA + + G VA+KR++ + + RE +H+E HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF---EHPN 75
Query: 418 LVGL----KAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
+V L RE KL LV E++ + L L PG P + T + R
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTE--TIKDMMFQLLR 131
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNGYRA 528
GL F+H S ++ H ++K N+L+ +G +++DFGL S ++V + YRA
Sbjct: 132 GLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 529 PE--LSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
PE L SS + D++S G + E+ K
Sbjct: 188 PEVLLQSS----YATPVDLWSVGCIFAEMFRRK 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 121/297 (40%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V E+ G+L L R P D+ T +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 157 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 213 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 252
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 253 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 305
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFA-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 365 AEMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKR------EFEQHMEVLGRLRHPN 417
E LG G F K G A K +K + R E E+ + +L +RHPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
++ L + + + +L+ E + G LF L + L + G+ ++
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYL 124
Query: 478 HFTCKSLKLTHGNIKSTNV-LLDK-TGNARVS--DFGLS-----------IFAPPSTVPR 522
H S ++ H ++K N+ LLDK N R+ DFG++ IF P V
Sbjct: 125 H----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV-- 178
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 179 -----APEIVNYE--PLGLEADMWSIGVITYILLSGASP 210
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 74 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 125
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 126 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 176
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 234
Query: 558 GKCPSVID 565
G P D
Sbjct: 235 GYPPFFAD 242
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 121/297 (40%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V E+ G+L L R P D+ T +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 192 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 248 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 287
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 288 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 340
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 365 AEMLGKGGFGTAYKAVL--DDGSV--VAVKRLK--DASIGGKREFEQHMEVLGRLRHPNL 418
++LG+G FG+ + L +DG+ VAVK +K ++S EF + HPN+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 419 VGLKAYYFAREEK-----LLVSEYMPNGSLFWLLHGNR---GPGRTPLDWTTRLKIAAGA 470
+ L + +++ +M G L L +R GP PL T LK
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDI 156
Query: 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNGYRAPE 530
A G+ ++ + H ++ + N +L V+DFGLS + + YR
Sbjct: 157 ALGMEYL----SNRNFLHRDLAARNCMLRDDMTVCVADFGLS-----KKIYSGDYYRQGR 207
Query: 531 LS----------SSDGRKQSQKSDVYSFGVLLLELLT 557
++ S R + KSDV++FGV + E+ T
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 60 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 111
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 112 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 162
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 163 EQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 220
Query: 558 GKCPSVID 565
G P D
Sbjct: 221 GYPPFFAD 228
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR + + P LV L+ + +V EY P
Sbjct: 74 ILDKQKVVKLKQI-EHTLNEKR-------IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAP 125
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 126 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 176
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 177 QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 234
Query: 558 GKCPSVID 565
G P D
Sbjct: 235 GYPPFFAD 242
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 52/293 (17%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNRGP-------GRTPLDWTTRLKIAAGAA 471
L L+V E+ G+L L R + L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 472 RGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG---- 525
+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 155 KGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 526 -YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWV 583
+ APE + R + +SDV+SFGVLL E+ + G P +
Sbjct: 211 KWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP--------------------YP 248
Query: 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 249 GVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 299
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVG 420
LGKGGF Y+ +D V A K + + + K + + + L +P++VG
Sbjct: 31 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
++ + +V E SL L + + R I +G+ ++H
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLH-- 143
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSD 535
+ ++ H ++K N+ L+ + ++ DFGL+ + + Y APE+
Sbjct: 144 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
G S + D++S G +L LL GK P
Sbjct: 202 G--HSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 94 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 145
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 146 GGEMFSHL---RRIGRF-XEPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 196
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 197 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYEMAA 254
Query: 558 GKCPSVID 565
G P D
Sbjct: 255 GYPPFFAD 262
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 52/293 (17%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNRGP-------GRTPLDWTTRLKIAAGAA 471
L L+V E+ G+L L R + L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 472 RGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG---- 525
+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 155 KGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 526 -YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPRWV 583
+ APE + R + +SDV+SFGVLL E+ + G P +
Sbjct: 211 KWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP--------------------YP 248
Query: 584 QSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 299
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 121/297 (40%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V +E+ G+L L R P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I P V + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 202 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 241
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 242 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 368 LGKGGFGTAYKA--VLDDGSVVAVKRLKDAS------IGGKREFE--QHMEVLGRLRHPN 417
+G+G +G +KA + + G VA+KR++ + + RE +H+E HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF---EHPN 75
Query: 418 LVGL----KAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
+V L RE KL LV E++ + L L PG P + T + R
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTE--TIKDMMFQLLR 131
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNGYRA 528
GL F+H S ++ H ++K N+L+ +G +++DFGL S ++V + YRA
Sbjct: 132 GLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 529 PE--LSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
PE L SS + D++S G + E+ K
Sbjct: 188 PEVLLQSS----YATPVDLWSVGCIFAEMFRRK 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVGLK 422
E +G+G +GT +KA + +VA+KR++ D G + + +L L+H N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ ++ LV E+ + N LD +GL F C
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-----LDPEIVKSFLFQLLKGLGF----CH 118
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSDGR 537
S + H ++K N+L+++ G +++DFGL+ F P + YR P++ +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AK 177
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S D++S G + EL P
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARP 201
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVG 420
LGKGGF Y+ +D V A K + + + K + + + L +P++VG
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
++ + +V E SL L + + R I +G+ ++H
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLH-- 159
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSD 535
+ ++ H ++K N+ L+ + ++ DFGL+ + + Y APE+
Sbjct: 160 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 217
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
G S + D++S G +L LL GK P
Sbjct: 218 G--HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 366 EMLGKGGFGTAYKAVLDDGS-VVAVKRLKDASIGGKRE---FEQHMEVLGRLRHPNLVGL 421
+++G+G FG L + V A+K L + + E F + +VL + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 422 KAYYFAREEKL-LVSEYMPNGSLFWLLHG--NRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
Y F + L LV +Y G L LL +R P + + IA + L ++H
Sbjct: 140 H-YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI-FAPPSTVPRSNG-----YRAPE-L 531
+IK N+L+D G+ R++DFG + TV S Y +PE L
Sbjct: 199 ----------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248
Query: 532 SSSDGRK--QSQKSDVYSFGVLLLELLTGKCP 561
+ +G K + D +S GV + E+L G+ P
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+++D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLIID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 356 ELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
+ ED+ + ++E+LG+G + AV L +G AVK ++ + + + +E L + +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ 68
Query: 415 -HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
+ N++ L ++ LV E + GS+ L H + + + ++ A
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQK---QKHFNEREASRVVRDVAAA 123
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLS-----------IFAPPST 519
L F+H + + H ++K N+L +K ++ DF L I P T
Sbjct: 124 LDFLH----TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 520 VP-RSNGYRAPELS---SSDGRKQSQKSDVYSFGVLLLELLTGKCPSV 563
P S Y APE+ + ++ D++S GV+L +L+G P V
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVG 420
LGKGGF Y+ +D V A K + + + K + + + L +P++VG
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
++ + +V E SL L + + R I +G+ ++H
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLH-- 159
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSD 535
+ ++ H ++K N+ L+ + ++ DFGL+ + + Y APE+
Sbjct: 160 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKK 217
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
G S + D++S G +L LL GK P
Sbjct: 218 G--HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 368 LGKGGFGTAYKA--VLDDGSVVAVKRLKDAS------IGGKREFE--QHMEVLGRLRHPN 417
+G+G +G +KA + + G VA+KR++ + + RE +H+E HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF---EHPN 75
Query: 418 LVGL----KAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
+V L RE KL LV E++ + L L PG P + T + R
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTE--TIKDMMFQLLR 131
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSNGYRA 528
GL F+H S ++ H ++K N+L+ +G +++DFGL S ++V + YRA
Sbjct: 132 GLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 529 PE--LSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
PE L SS + D++S G + E+ K
Sbjct: 188 PEVLLQSS----YATPVDLWSVGCIFAEMFRRK 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNL 418
E LG G FG + D S VAVK LK + +F + + + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+ L K+ V+E P GSL L ++G T + A A G+ ++
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYL- 131
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----------TVPRSNGYRA 528
+S + H ++ + N+LL ++ DFGL P + VP + + A
Sbjct: 132 ---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--WCA 186
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV 563
PE S R S SD + FGV L E+ T G+ P +
Sbjct: 187 PE--SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 366 EMLGKGGFG-TAYKAVLDDGSVVAVKRLKDASIGGKRE---FEQHMEVLGRLRHPNLVGL 421
+++G+G FG A + + + A+K L + + E F + +VL + L
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 422 KAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
Y F E L LV +Y G L LL ++ + P D R I + IH
Sbjct: 140 H-YAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPED-MARFYIGE-MVLAIDSIH-- 192
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN------GYRAPEL--S 532
L H +IK NVLLD G+ R++DFG + +S+ Y +PE+ +
Sbjct: 193 --QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 533 SSDGR-KQSQKSDVYSFGVLLLELLTGKCP 561
DG K + D +S GV + E+L G+ P
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 368 LGKGGFGTAYKAVLDD---GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
LG+G FG ++ ++D G AVK+++ E+ M G L P +V L Y
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVF----RAEELMACAG-LTSPRIVPL--Y 132
Query: 425 YFAREEKL--LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
RE + E + GSL L+ + G P D L A GL ++H
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPED--RALYYLGQALEGLEYLH---- 183
Query: 483 SLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPPST----------VPRSNGYRAPEL 531
S ++ HG++K+ NVLL G +A + DFG ++ P +P + + APE+
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
GR K DV+S ++L +L G P
Sbjct: 244 VL--GRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 120/297 (40%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V E+ G+L L R P D+ T +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I P V + +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 211 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 250
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 251 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 368 LGKGGFGTAYKAVLDD---GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
LG+G FG ++ ++D G AVK+++ E+ M G L P +V L Y
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVF----RAEELMACAG-LTSPRIVPL--Y 151
Query: 425 YFAREEKL--LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
RE + E + GSL L+ + G P D L A GL ++H
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPED--RALYYLGQALEGLEYLH---- 202
Query: 483 SLKLTHGNIKSTNVLLDKTG-NARVSDFGLSIFAPPST----------VPRSNGYRAPEL 531
S ++ HG++K+ NVLL G +A + DFG ++ P +P + + APE+
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 532 SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
GR K DV+S ++L +L G P
Sbjct: 263 VL--GRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLK 422
LGKGGF ++ D V ++ S+ + + + + L H ++VG
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
++ + +V E SL L H R P +I G ++H
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN-- 136
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSDGR 537
++ H ++K N+ L++ ++ DFGL+ T+ + Y APE+ S G
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG- 193
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S + DV+S G ++ LL GK P
Sbjct: 194 -HSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 121/295 (41%), Gaps = 54/295 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNRG------PGRTPLDWTTR---LKIAAG 469
L L+V E+ G+L L R P D+ T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG-- 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I P V + +
Sbjct: 157 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPR 581
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 213 PLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------------------- 250
Query: 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ DF L+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 366 EMLGKGGFG-TAYKAVLDDGSVVAVKRLKDASIGGKRE---FEQHMEVLGRLRHPNLVGL 421
+++G+G FG A + + + A+K L + + E F + +VL + L
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 422 KAYYFAREEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFT 480
Y F E L LV +Y G L LL ++ + P D R I + IH
Sbjct: 156 H-YAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPED-MARFYIGE-MVLAIDSIH-- 208
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN------GYRAPEL--S 532
L H +IK NVLLD G+ R++DFG + +S+ Y +PE+ +
Sbjct: 209 --QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 533 SSDGR-KQSQKSDVYSFGVLLLELLTGKCP 561
DG K + D +S GV + E+L G+ P
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLK 422
LGKGGF ++ D V ++ S+ + + + + L H ++VG
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
++ + +V E SL L H R P +I G ++H
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN-- 136
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSDGR 537
++ H ++K N+ L++ ++ DFGL+ T+ + Y APE+ S G
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG- 193
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S + DV+S G ++ LL GK P
Sbjct: 194 -HSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 57/302 (18%)
Query: 368 LGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL-RHPNLV 419
LG G FG TAY + D ++ VAVK LK ++ +RE ++VL L H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--------GPG-----RTPLDWTTRLKI 466
L L+++EY G L L R P LD L
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
+ A+G+AF+ S H ++ + N+LL ++ DFGL+ I + V + N
Sbjct: 151 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVD 578
+ APE S + +SDV+S+G+ L EL + G P VD
Sbjct: 207 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSP----------YPGMPVD 254
Query: 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638
+ +++E ++ + EM +++ C A P +RP +V+LI
Sbjct: 255 SKFY--KMIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 302
Query: 639 EE 640
E+
Sbjct: 303 EK 304
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 31/216 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNL 418
E LG G FG + D S VAVK LK + +F + + + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+ L K+ V+E P GSL L ++G T + A A G+ ++
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYL- 127
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----------SIFAPPSTVPRSNGYRA 528
+S + H ++ + N+LL ++ DFGL + VP + + A
Sbjct: 128 ---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA--WCA 182
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV 563
PE S R S SD + FGV L E+ T G+ P +
Sbjct: 183 PE--SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 216
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNL 418
E LG G FG + D S VAVK LK + +F + + + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+ L K+ V+E P GSL L ++G T + A A G+ ++
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYL- 127
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----------TVPRSNGYRA 528
+S + H ++ + N+LL ++ DFGL P + VP + + A
Sbjct: 128 ---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--WCA 182
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV 563
PE S R S SD + FGV L E+ T G+ P +
Sbjct: 183 PE--SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLK 422
LGKGGF ++ D V ++ S+ + + + + L H ++VG
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
++ + +V E SL L H R P +I G ++H
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN-- 140
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSDGR 537
++ H ++K N+ L++ ++ DFGL+ T+ + Y APE+ S G
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG- 197
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S + DV+S G ++ LL GK P
Sbjct: 198 -HSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 57/302 (18%)
Query: 368 LGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL-RHPNLV 419
LG G FG TAY + D ++ VAVK LK ++ +RE ++VL L H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--------GPG-----RTPLDWTTRLKI 466
L L+++EY G L L R P LD L
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
+ A+G+AF+ S H ++ + N+LL ++ DFGL+ I + V + N
Sbjct: 169 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVD 578
+ APE S + +SDV+S+G+ L EL + G P VD
Sbjct: 225 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSP----------YPGMPVD 272
Query: 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638
+ +++E ++ + EM +++ C A P +RP +V+LI
Sbjct: 273 SKFY--KMIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 320
Query: 639 EE 640
E+
Sbjct: 321 EK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 57/302 (18%)
Query: 368 LGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL-RHPNLV 419
LG G FG TAY + D ++ VAVK LK ++ +RE ++VL L H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--------GPG-----RTPLDWTTRLKI 466
L L+++EY G L L R P LD L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
+ A+G+AF+ S H ++ + N+LL ++ DFGL+ I + V + N
Sbjct: 174 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVD 578
+ APE S + +SDV+S+G+ L EL + G P VD
Sbjct: 230 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSP----------YPGMPVD 277
Query: 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638
+ +++E ++ + EM +++ C A P +RP +V+LI
Sbjct: 278 SKFY--KMIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 325
Query: 639 EE 640
E+
Sbjct: 326 EK 327
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 57/302 (18%)
Query: 368 LGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL-RHPNLV 419
LG G FG TAY + D ++ VAVK LK ++ +RE ++VL L H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--------GPG-----RTPLDWTTRLKI 466
L L+++EY G L L R P LD L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
+ A+G+AF+ S H ++ + N+LL ++ DFGL+ I + V + N
Sbjct: 174 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVD 578
+ APE S + +SDV+S+G+ L EL + G P VD
Sbjct: 230 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSP----------YPGMPVD 277
Query: 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638
+ +++E ++ + EM +++ C A P +RP +V+LI
Sbjct: 278 SKFY--KMIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 325
Query: 639 EE 640
E+
Sbjct: 326 EK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 57/302 (18%)
Query: 368 LGKGGFG-----TAYKAVLDDGSV-VAVKRLKDASIGGKRE-FEQHMEVLGRL-RHPNLV 419
LG G FG TAY + D ++ VAVK LK ++ +RE ++VL L H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 420 GLKAYYFAREEKLLVSEYMPNGSLFWLLHGNR--------GPG-----RTPLDWTTRLKI 466
L L+++EY G L L R P LD L
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 467 AAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSN 524
+ A+G+AF+ S H ++ + N+LL ++ DFGL+ I + V + N
Sbjct: 167 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 525 G-----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVD 578
+ APE S + +SDV+S+G+ L EL + G P VD
Sbjct: 223 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSP----------YPGMPVD 270
Query: 579 LPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVKLI 638
+ +++E ++ + EM +++ C A P +RP +V+LI
Sbjct: 271 SKFY--KMIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 318
Query: 639 EE 640
E+
Sbjct: 319 EK 320
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 36/175 (20%)
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG-- 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 200 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPR 581
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 256 PLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------------------- 293
Query: 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 294 YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 346
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 36/175 (20%)
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG-- 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 207 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPR 581
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 263 PLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------------------- 300
Query: 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 301 YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 353
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 36/175 (20%)
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG-- 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 209 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPR 581
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 265 PLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------------------- 302
Query: 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 303 YPGVKIDEEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVE 355
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 36/175 (20%)
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG-- 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I+ P V + +
Sbjct: 202 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 526 ---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDLPR 581
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 258 PLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------------------- 295
Query: 582 WVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 296 YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 348
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 409 VLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAA 468
VL +L HPN++ L ++ + LV E G LF + R I
Sbjct: 57 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----DEIILRQKFSEVDAAVIMK 111
Query: 469 GAARGLAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNA--RVSDFGLSI-FAPPSTVPRSN 524
G ++H + H ++K N+LL+ K+ +A ++ DFGLS F +
Sbjct: 112 QVLSGTTYLH----KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 167
Query: 525 G---YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G Y APE+ +K +K DV+S GV+L LL G P
Sbjct: 168 GTAYYIAPEVLR---KKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 43/223 (19%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
+LG+G FG KA D A+K+++ + M +L L H +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVM-LLASLNHQYVVRYYAAW 71
Query: 426 FAR------------EEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
R + L + EY NG+L+ L+H + W ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---------IFAPPSTVPRS 523
L++IH S + H ++K N+ +D++ N ++ DFGL+ + +P S
Sbjct: 128 ALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 524 NG----------YRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ Y A E+ G ++K D+YS G++ E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEMI 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y APE+ S G ++ D ++ GVL+ ++
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA--VDWWALGVLIYQMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNL 418
E LG G FG + D S VAVK LK + +F + + + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+ L K+ V+E P GSL L ++G T + A A G+ ++
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYL- 127
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----------TVPRSNGYRA 528
+S + H ++ + N+LL ++ DFGL P + VP + + A
Sbjct: 128 ---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--WCA 182
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV 563
PE S R S SD + FGV L E+ T G+ P +
Sbjct: 183 PE--SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 358 EDLLRASAEMLGKGGFGTAYKAV--LDDGSV-VAVKRLKDAS-IGGKREFEQHMEVLGRL 413
++LL A E LG G FG+ + V + + VA+K LK + E + +++ +L
Sbjct: 9 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 414 RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARG 473
+P +V L A E +LV E G L L G R P+ + ++ + G
Sbjct: 68 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPV--SNVAELLHQVSMG 122
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPS-TVPRSNG----- 525
+ ++ + H ++ + NVLL A++SDFGLS + A S RS G
Sbjct: 123 MKYL----EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 526 YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + RK S +SDV+S+GV + E L+
Sbjct: 179 WYAPE--CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 368 LGKGGFGTAYK--AVLDDGSVVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
LG+G + T YK + L D ++VA+K ++ + G + + +L L+H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+ LV EY+ +L G +L + RGLA+ C
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYL----DDCGNIINMHNVKLFLFQ-LLRGLAY----CHRQ 119
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSNG-----YRAPE--LSSSDGR 537
K+ H ++K N+L+++ G +++DFGL+ T N YR P+ L S+D
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD-- 177
Query: 538 KQSQKSDVYSFGVLLLELLTGK 559
S + D++ G + E+ TG+
Sbjct: 178 -YSTQIDMWGVGCIFYEMATGR 198
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 120/297 (40%), Gaps = 56/297 (18%)
Query: 368 LGKGGFGTAYKAV---LDDGSV---VAVKRLKD-ASIGGKREFEQHMEVLGRL-RHPNLV 419
LG+G FG +A +D + VAVK LK+ A+ R +++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 420 GLKAYYFAREEKLLV-SEYMPNGSLFWLLHGNR--------GPGRTPLDWTTRLKIAA-- 468
L L+V E+ G+L L R P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 469 -GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPPSTVPRSNG 525
A+G+ F+ S K H ++ + N+LL + ++ DFGL+ I P V + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 526 -----YRAPELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSVIDXXXXXXXXXXXVDL 579
+ APE + R + +SDV+SFGVLL E+ + G P
Sbjct: 202 RLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASP------------------ 241
Query: 580 PRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTSASPDQRPNMSHVVK 636
+ + EE+ + + MR D + Q + C P QRP S +V+
Sbjct: 242 --YPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 31/216 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNL 418
E LG G FG + D S VAVK LK + +F + + + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+ L K+ V+E P GSL L ++G T + A A G+ ++
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYL- 137
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----------SIFAPPSTVPRSNGYRA 528
+S + H ++ + N+LL ++ DFGL + VP + + A
Sbjct: 138 ---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA--WCA 192
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV 563
PE S R S SD + FGV L E+ T G+ P +
Sbjct: 193 PE--SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNL 418
E LG G FG + D S VAVK LK + +F + + + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+ L K+ V+E P GSL L ++G T + A A G+ ++
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYL- 131
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----------TVPRSNGYRA 528
+S + H ++ + N+LL ++ DFGL P + VP + + A
Sbjct: 132 ---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--WCA 186
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV 563
PE S R S SD + FGV L E+ T G+ P +
Sbjct: 187 PE--SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 220
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 366 EMLGKGGFGTAYKAVLDDGS----VVAVKRLKDASIG---GKREFEQHMEVLGRLRHPNL 418
E LG G FG + D S VAVK LK + +F + + + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
+ L K+ V+E P GSL L ++G T + A A G+ ++
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYL- 137
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPS----------TVPRSNGYRA 528
+S + H ++ + N+LL ++ DFGL P + VP + + A
Sbjct: 138 ---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--WCA 192
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLT-GKCPSV 563
PE S R S SD + FGV L E+ T G+ P +
Sbjct: 193 PE--SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 226
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 367 MLGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQ------HMEVLGRL----RH 415
+LGKGGFGT + L D VA+K + + G + +L ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 416 PNLVGLKAYYFAREEKLLVSEY-MPNGSLFWLLHGNRGP-GRTPLDWTTRLKIAAGAARG 473
P ++ L ++ +E +LV E +P LF + +GP G P +R A
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI-TEKGPLGEGP----SRCFFGQVVA-- 150
Query: 474 LAFIHFTCKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIF---APPSTVPRSNGYRAP 529
A H C S + H +IK N+L+D + G A++ DFG P + + Y P
Sbjct: 151 -AIQH--CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPP 207
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
E S + + + V+S G+LL +++ G P
Sbjct: 208 EWISRH-QYHALPATVWSLGILLYDMVCGDIP 238
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 30/244 (12%)
Query: 331 SSPYPAQQAGYERGSMVFFEGTKRFELE-DLLRASAEMLGKGGFGTAYKAVL-DDGSVVA 388
SS +Q GY G +R++ E + L EM G G G +K G V+A
Sbjct: 2 SSGSSGKQTGY------LTIGGQRYQAEINDLENLGEM-GSGTCGQVWKMRFRKTGHVIA 54
Query: 389 VKRLKDASIGGKREFEQHME----VLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF 444
VK+++ + G K E ++ + VL P +V + + + E M G+
Sbjct: 55 VKQMRRS--GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCA 110
Query: 445 WLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNA 504
L R G P ++ +A A +++ + + H ++K +N+LLD+ G
Sbjct: 111 EKLK-KRMQGPIPERILGKMTVAIVKA-----LYYLKEKHGVIHRDVKPSNILLDERGQI 164
Query: 505 RVSDFGLS-IFAPPSTVPRSNG---YRAPE-LSSSDGRKQSQ--KSDVYSFGVLLLELLT 557
++ DFG+S RS G Y APE + D K ++DV+S G+ L+EL T
Sbjct: 165 KLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
Query: 558 GKCP 561
G+ P
Sbjct: 225 GQFP 228
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 368 LGKGGFGTAYKAVLDD---GSVVAVKRLKDASI---GGKREFEQHMEVLGRLRHPNLVGL 421
LG G +G + D G+ A+K +K +S+ + VL +L HPN++ L
Sbjct: 29 LGSGAYGEV--LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 422 KAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTC 481
++ + LV E G LF + R I G ++H
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELF-----DEIILRQKFSEVDAAVIMKQVLSGTTYLH--- 138
Query: 482 KSLKLTHGNIKSTNVLLD-KTGNA--RVSDFGLSI-FAPPSTVPRSNG---YRAPELSSS 534
+ H ++K N+LL+ K+ +A ++ DFGLS F + G Y APE+
Sbjct: 139 -KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR- 196
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
+K +K DV+S GV+L LL G P
Sbjct: 197 --KKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 348 FFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQH 406
+ +G+ R L D +E LG+G Y+ A+K LK K+
Sbjct: 42 WIDGSNRDALSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTE 98
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF-WLLHGNRGPGRTPLDWTTRLK 465
+ VL RL HPN++ LK + E LV E + G LF ++ R D ++
Sbjct: 99 IGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI- 157
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDK---TGNARVSDFGLSIFAPPS---- 518
+A++H + H ++K N+L +++DFGLS
Sbjct: 158 -----LEAVAYLHEN----GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 519 TVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
TV + GY APE+ G + D++S G++ LL G P
Sbjct: 209 TVCGTPGYCAPEILR--GCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVK--RLKDASIGGKREFEQHMEVLGRLR---HPNLVGL 421
+G G +GT YKA G VA+K R+ + G + + +L RL HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 422 KAYYFA----REEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
RE K+ LV E++ + L L PG L T + RGL F
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-------IFAPPSTVPRSNGYRAP 529
+H C + H ++K N+L+ G +++DFGL+ AP V + YRAP
Sbjct: 128 LHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---VVVTLWYRAP 180
Query: 530 ELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
E+ + D++S G + E+ K
Sbjct: 181 EVLLQS--TYATPVDMWSVGCIFAEMFRRK 208
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVV--AVKRLKDASI----GGKREFEQHMEVLGRLRHPNL 418
++LG+G +G K VLD ++ AVK LK + G+ ++ +++L RLRH N+
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 419 VGLKAYYFAREEK--LLVSEYMPNGSLFWL--LHGNRGPGRTPLDWTTRLKIAAGAARGL 474
+ L + E++ +V EY G L + R P + +L GL
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL------IDGL 122
Query: 475 AFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG----LSIFAPPSTVPRSNG---YR 527
++H S + H +IK N+LL G ++S G L FA T S G ++
Sbjct: 123 EYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PE+++ K D++S GV L + TG P
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 16/200 (8%)
Query: 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAY 424
+G G +G K DG ++ K L S+ K+ + +L L+HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 425 YFAREEKLL--VSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTC 481
R L V EY G L ++ +G R LD L++ L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 482 KS-LKLTHGNIKSTNVLLDKTGNARVSDFGLSIF-----APPSTVPRSNGYRAPELSSSD 535
+ H ++K NV LD N ++ DFGL+ + T + Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE--QMN 189
Query: 536 GRKQSQKSDVYSFGVLLLEL 555
++KSD++S G LL EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ D GL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ FGL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAY 424
+G G +G K DG ++ K L S+ K+ + +L L+HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 425 YFAREEKLL--VSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTC 481
R L V EY G L ++ +G R LD L++ L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 482 KS-LKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPR----SNGYRAPELSSSD 535
+ H ++K NV LD N ++ DFGL+ I ++ + + Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE--QMN 189
Query: 536 GRKQSQKSDVYSFGVLLLEL 555
++KSD++S G LL EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+G G +G+ + + G +AVK+L + I KR + + + +L ++H N++GL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGL-- 115
Query: 424 YYFAREEKLLVSEYMPNGSL-----FWLLHGNRGPGRTPLDWTTRLK------IAAGAAR 472
+ + P SL +L+ G + +L + R
Sbjct: 116 ----------LDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 165
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPE 530
GL +IH S + H ++K +N+ +++ ++ DFGL+ + YRAPE
Sbjct: 166 GLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 221
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ + + D++S G ++ ELLTG+
Sbjct: 222 IML-NWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ D GL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVK--RLKDASIGGKREFEQHMEVLGRLR---HPNLVGL 421
+G G +GT YKA G VA+K R+ + G + + +L RL HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 422 KAYYFA----REEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
RE K+ LV E++ + L L PG L T + RGL F
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFA-----PPSTVPRSNGYRAPE 530
+H C + H ++K N+L+ G +++DFGL+ I++ P V + YRAPE
Sbjct: 128 LHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPE 181
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ + D++S G + E+ K
Sbjct: 182 VLLQS--TYATPVDMWSVGCIFAEMFRRK 208
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 384 GSVVAVKRLK-DASIGGKREFEQ-HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNG 441
G V V+R+ +A F Q + V HPN+V +A + A E +V+ +M G
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 442 SLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKT 501
S L+ + G L L+ G + L +IH + H ++K++++L+
Sbjct: 96 SAKDLICTHFMDGMNELAIAYILQ---GVLKALDYIH----HMGYVHRSVKASHILISVD 148
Query: 502 GNARVSDF--GLSIFAP----------PSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFG 549
G +S LS+ + P + + +PE+ + + KSD+YS G
Sbjct: 149 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 208
Query: 550 VLLLELLTGKCP 561
+ EL G P
Sbjct: 209 ITACELANGHVP 220
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 26/233 (11%)
Query: 347 VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLD----DGSVVAVKRLK-DASIGGKR 401
++F+G F E ++GKG F L G V V+R+ +A
Sbjct: 12 LYFQGMSSFLPEGGCYELLTVIGKG-FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMV 70
Query: 402 EFEQ-HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDW 460
F Q + V HPN+V +A + A E +V+ +M GS L+ + G L
Sbjct: 71 TFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAI 130
Query: 461 TTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDF--GLSIFAP-- 516
L+ G + L +IH + H ++K++++L+ G +S LS+ +
Sbjct: 131 AYILQ---GVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183
Query: 517 --------PSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
P + + +PE+ + + KSD+YS G+ EL G P
Sbjct: 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 356 ELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR 414
EL +L +L +GGF Y+A + G A+KRL R Q + + +L
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 415 -HPNLVGL-KAYYFAREEK-------LLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
HPN+V A +EE LL++E + G L L + R PL T LK
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFL--KKMESRGPLSCDTVLK 140
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFG 510
I R + +H + + H ++K N+LL G ++ DFG
Sbjct: 141 IFYQTCRAVQHMHR--QKPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLK 422
LGKGGF ++ D V ++ S+ + + + + L H ++VG
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
++ + +V E SL L H R P +I G ++H
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN-- 134
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSDGR 537
++ H ++K N+ L++ ++ DFGL+ + + Y APE+ S G
Sbjct: 135 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG- 191
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S + DV+S G ++ LL GK P
Sbjct: 192 -HSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST--VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ G +V+DFG + T + + Y AP + S G ++ D ++ GVL+ E+
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKA--VDWWALGVLIYEMAA 233
Query: 558 GKCPSVID 565
G P D
Sbjct: 234 GYPPFFAD 241
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLK 422
+LG+GGFG + + G + A K+L + ++ ++ M ++L ++ +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ + + LV M G + + ++ N + A GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLH---- 306
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSDGR 537
+ + ++K NVLLD GN R+SD GL++ G+ APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL--GE 364
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVGLK 422
E +G+G +GT +KA + +VA+KR++ D G + + +L L+H N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ ++ LV E+ + N LD +GL F C
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-----LDPEIVKSFLFQLLKGLGF----CH 118
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPRSN----GYRAPELSSSDGR 537
S + H ++K N+L+++ G ++++FGL+ F P + YR P++ +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AK 177
Query: 538 KQSQKSDVYSFGVLLLEL 555
S D++S G + EL
Sbjct: 178 LYSTSIDMWSAGCIFAEL 195
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLK 422
+LG+GGFG + + G + A K+L + ++ ++ M ++L ++ +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ + + LV M G + + ++ N + A GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLH---- 306
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSDGR 537
+ + ++K NVLLD GN R+SD GL++ G+ APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL--GE 364
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLK 422
+LG+GGFG + + G + A K+L + ++ ++ M ++L ++ +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ + + LV M G + + ++ N + A GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLH---- 306
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSDGR 537
+ + ++K NVLLD GN R+SD GL++ G+ APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL--GE 364
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVK--RLKDASIGGKREFEQHMEVLGRLR---HPNLVGL 421
+G G +GT YKA G VA+K R+ + G + + +L RL HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 422 KAYYFA----REEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
RE K+ LV E++ + L L PG L T + RGL F
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAP-----PSTVPRSNGYRAPE 530
+H C + H ++K N+L+ G +++DFGL+ I++ P V + YRAPE
Sbjct: 128 LHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPE 181
Query: 531 LSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
+ + D++S G + E+ K
Sbjct: 182 VLLQS--TYATPVDMWSVGCIFAEMFRRK 208
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLK 422
LGKGGF ++ D V ++ S+ + + + + L H ++VG
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
++ + +V E SL L H R P +I G ++H
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN-- 158
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSDGR 537
++ H ++K N+ L++ ++ DFGL+ + + Y APE+ S G
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG- 215
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S + DV+S G ++ LL GK P
Sbjct: 216 -HSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIGGKREFEQHM---EVLGRLRHPNLVGLK 422
+LG+GGFG + + G + A K+L + ++ ++ M ++L ++ +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ + + LV M G + + ++ N + A GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLH---- 306
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN-----GYRAPELSSSDGR 537
+ + ++K NVLLD GN R+SD GL++ G+ APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL--GE 364
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
+ D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL-K 422
+G G +G+ A G VAVK+L + I KR + + + +L ++H N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ AR + Y+ + L+ + D L RGL +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---- 142
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTV--PRSNGYRAPELSSSDGRKQS 540
S + H ++K +N+ +++ ++ D GL+ + YRAPE+ + +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIML-NWMHYN 201
Query: 541 QKSDVYSFGVLLLELLTGK 559
Q D++S G ++ ELLTG+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 365 AEMLGKGGFGTAYKAV-----LDDGSVVAVKRLKDASIGG--KREFEQHMEVLGRLRHPN 417
E LG G F K L+ + KR AS G + E E+ + +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
++ L Y R + +L+ E + G LF L + L G+ ++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYL 131
Query: 478 HFTCKSLKLTHGNIKSTNV-LLDK---TGNARVSDFGLS-----------IFAPPSTVPR 522
H + K+ H ++K N+ LLDK + ++ DFGL+ IF P V
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV-- 185
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 186 -----APEIVNYE--PLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 365 AEMLGKGGFGTAYKAV-----LDDGSVVAVKRLKDASIGG--KREFEQHMEVLGRLRHPN 417
E LG G F K L+ + KR AS G + E E+ + +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
++ L Y R + +L+ E + G LF L + L G+ ++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYL 131
Query: 478 HFTCKSLKLTHGNIKSTNV-LLDK---TGNARVSDFGLS-----------IFAPPSTVPR 522
H + K+ H ++K N+ LLDK + ++ DFGL+ IF P V
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV-- 185
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 186 -----APEIVNYE--PLGLEADMWSIGVITYILLSGASP 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 367 MLGKGGFGTAYKAVLDDGSVVAVKRLKDASI----GGKREFEQHMEVLGRLRHPNLVGLK 422
LGKGGF ++ D V ++ S+ + + + + L H ++VG
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
++ + +V E SL L H R P +I G ++H
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN-- 160
Query: 483 SLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAP-----PSTVPRSNGYRAPELSSSDGR 537
++ H ++K N+ L++ ++ DFGL+ + + Y APE+ S G
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG- 217
Query: 538 KQSQKSDVYSFGVLLLELLTGKCP 561
S + DV+S G ++ LL GK P
Sbjct: 218 -HSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 365 AEMLGKGGFGTAYKAV-----LDDGSVVAVKRLKDASIGG--KREFEQHMEVLGRLRHPN 417
E LG G F K L+ + KR AS G + E E+ + +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
++ L Y R + +L+ E + G LF L + L G+ ++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYL 131
Query: 478 HFTCKSLKLTHGNIKSTNV-LLDK---TGNARVSDFGLS-----------IFAPPSTVPR 522
H + K+ H ++K N+ LLDK + ++ DFGL+ IF P V
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV-- 185
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 186 -----APEIVNYE--PLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 365 AEMLGKGGFGTAYKAV-----LDDGSVVAVKRLKDASIGG--KREFEQHMEVLGRLRHPN 417
E LG G F K L+ + KR AS G + E E+ + +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 418 LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFI 477
++ L Y R + +L+ E + G LF L + L G+ ++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYL 131
Query: 478 HFTCKSLKLTHGNIKSTNV-LLDK---TGNARVSDFGLS-----------IFAPPSTVPR 522
H + K+ H ++K N+ LLDK + ++ DFGL+ IF P V
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV-- 185
Query: 523 SNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ + + ++D++S GV+ LL+G P
Sbjct: 186 -----APEIVNYE--PLGLEADMWSIGVITYILLSGASP 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL 421
E +G G +G A G VA+K++ D KR + +++L +H N++ +
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAI 119
Query: 422 KAYY-----FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
K + + + V + L ++H ++ PL RGL +
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKY 174
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPP-------STVPRSNGYR 527
+H S ++ H ++K +N+L+++ ++ DFG++ + P + + YR
Sbjct: 175 MH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
APEL S + +Q D++S G + E+L +
Sbjct: 231 APELMLS-LHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 380 VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMP 439
+LD VV +K++ + ++ KR +L + P LV L+ + +V EY+
Sbjct: 73 ILDKQKVVKLKQI-EHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 440 NGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD 499
G +F L R GR + R AA ++H SL L + ++K N+L+D
Sbjct: 125 GGEMFSHL---RRIGRFS-EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLID 175
Query: 500 KTGNARVSDFGLSIFAPPST-----VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLE 554
+ G +V+DFG + T P + APE+ S G ++ D ++ GVL+ E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXLCGTPEA---LAPEIILSKGYNKA--VDWWALGVLIYE 230
Query: 555 LLTGKCPSVID 565
+ G P D
Sbjct: 231 MAAGYPPFFAD 241
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 352 TKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKD-----ASIGGKREFEQH 406
++R +EDL +G+G +G YKA DG LK S+ RE
Sbjct: 13 SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE---- 68
Query: 407 MEVLGRLRHPNLVGLKAYYFAREEK--LLVSEYMPNGSLFWLLHGNRG--PGRTPLDWTT 462
+ +L L+HPN++ L+ + + ++ L+ +Y + L+ ++ +R + P
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKP----- 122
Query: 463 RLKIAAGAARGLAF-----IHFTCKSLKLTHGNIKSTNVLL----DKTGNARVSDFGLS- 512
+++ G + L + IH+ + L H ++K N+L+ + G +++D G +
Sbjct: 123 -VQLPRGMVKSLLYQILDGIHYLHANWVL-HRDLKPANILVMGEGPERGRVKIADMGFAR 180
Query: 513 IFAPP-------STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
+F P V + YRAPEL R ++ D+++ G + ELLT +
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLK---DASIGGKREFEQHMEVLGRLRHPNLVGL 421
E +G G +G A G VA+K++ D KR + +++L +H N++ +
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAI 118
Query: 422 KAYY-----FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
K + + + V + L ++H ++ PL RGL +
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKY 173
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--IFAPP-------STVPRSNGYR 527
+H S ++ H ++K +N+L+++ ++ DFG++ + P + + YR
Sbjct: 174 MH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
APEL S + +Q D++S G + E+L +
Sbjct: 230 APELMLS-LHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 16/200 (8%)
Query: 368 LGKGGFGTAYKAVLD-DGSVVAVKRLKDASI--GGKREFEQHMEVLGRLRHPNLVGLKAY 424
+G G +G K DG ++ K L S+ K+ + +L L+HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 425 YFAREEKLL--VSEYMPNGSLFWLLHGNRGPG-RTPLDWTTRLKIAAGAARGLAFIHFTC 481
R L V EY G L ++ +G R LD L++ L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 482 KS-LKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFAPPSTVPR----SNGYRAPELSSSD 535
+ H ++K NV LD N ++ DFGL+ I + + Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE--QMN 189
Query: 536 GRKQSQKSDVYSFGVLLLEL 555
++KSD++S G LL EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 353 KRFELEDLLRASAEMLGKGGFGTAYKAV-----LDDGSVVAVKRLKDASIGG--KREFEQ 405
K+ ++ED E LG G F K L+ + KR AS G + E E+
Sbjct: 6 KQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 406 HMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLK 465
+ +L ++ H N++ L Y R + +L+ E + G LF L + L
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATS 119
Query: 466 IAAGAARGLAFIHFTCKSLKLTHGNIKSTNV-LLDK---TGNARVSDFGLS--------- 512
G+ ++H + K+ H ++K N+ LLDK + ++ DFGL+
Sbjct: 120 FIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 513 --IFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
IF P V APE+ + + ++D++S GV+ LL+G P
Sbjct: 176 KNIFGTPEFV-------APEIVNYE--PLGLEADMWSIGVITYILLSGASP 217
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ +L H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 173 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 220
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 221 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ +L H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 159 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 206
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 207 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 241
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 45/219 (20%)
Query: 366 EMLGKGGFGTAYKAVLDD-GSVVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E LG GGFG + + D G VA+K+ + + S + + ++++ +L HPN+V +
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 424 YYFAREE------KLLVSEYMPNGSLFWLLHG-------NRGPGRTPLDWTTRLKIAAGA 470
++ LL EY G L L+ GP RT L +
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL---------SDI 130
Query: 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLD-----------KTGNARVSDFGLSIFAPPST 519
+ L ++H ++ H ++K N++L G A+ D G T
Sbjct: 131 SSALRYLHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 186
Query: 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
+ Y APEL + +K + D +SFG L E +TG
Sbjct: 187 LQ----YLAPELL--EQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 45/219 (20%)
Query: 366 EMLGKGGFGTAYKAVLDD-GSVVAVKRLK-DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
E LG GGFG + + D G VA+K+ + + S + + ++++ +L HPN+V +
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 424 YYFAREE------KLLVSEYMPNGSLFWLLHG-------NRGPGRTPLDWTTRLKIAAGA 470
++ LL EY G L L+ GP RT L +
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL---------SDI 131
Query: 471 ARGLAFIHFTCKSLKLTHGNIKSTNVLLD-----------KTGNARVSDFGLSIFAPPST 519
+ L ++H ++ H ++K N++L G A+ D G T
Sbjct: 132 SSALRYLHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 187
Query: 520 VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
+ Y APEL + +K + D +SFG L E +TG
Sbjct: 188 LQ----YLAPELL--EQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 27/217 (12%)
Query: 366 EMLGKGGFG-TAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
+++G+G F A + G V A+K + + + E E L + + +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 425 YFAREEK---LLVSEYMPNGSLFWLL--HGNRGPGRTPLDWTTRLKIAAGAARGLAFIHF 479
+FA +++ LV EY G L LL G R P + + +A + L ++H
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH- 185
Query: 480 TCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRS------NGYRAPELSS 533
+IK N+LLD+ G+ R++DFG + RS Y +PE+
Sbjct: 186 ---------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 534 S-----DGRKQSQKSDVYSFGVLLLELLTGKCPSVID 565
+ + D ++ GV E+ G+ P D
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 26/214 (12%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
E++GKG FG Y + + ++ + + F++ + + RH N+V
Sbjct: 38 GELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
+ +++ +L+ ++ + LD +IA +G+ ++H +
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLH----AK 149
Query: 485 KLTHGNIKSTNVLLDKTGNARVSDFGL-SIFAPPSTVPRSNGYR---------APEL--- 531
+ H ++KS NV D G ++DFGL SI R + R APE+
Sbjct: 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 532 ----SSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D S+ SDV++ G + EL + P
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 43/223 (19%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
+LG+G FG KA D A+K+++ + M +L L H +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVM-LLASLNHQYVVRYYAAW 71
Query: 426 FAR------------EEKLLVS-EYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
R + L + EY N +L+ L+H + W ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---------IFAPPSTVPRS 523
L++IH S + H ++K N+ +D++ N ++ DFGL+ + +P S
Sbjct: 128 ALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 524 NG----------YRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ Y A E+ G ++K D+YS G++ E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEMI 225
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 40/215 (18%)
Query: 365 AEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAY 424
AE LG+G FG ++ V + + + ++ + +L RH N++ L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 425 YFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAA---GAARGLAFIHFTC 481
+ + EE +++ E++ + LD R+ +A ++++H C
Sbjct: 70 FESMEELVMIFEFI-----------------SGLDIFERINTSAFELNEREIVSYVHQVC 112
Query: 482 KSLKLTHG------NIKSTNVLLD--KTGNARVSDFGLSIFAPPS-------TVPRSNGY 526
++L+ H +I+ N++ ++ ++ +FG + P T P Y
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE---Y 169
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
APE+ D S +D++S G L+ LL+G P
Sbjct: 170 YAPEVHQHDV--VSTATDMWSLGTLVYVLLSGINP 202
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 23/224 (10%)
Query: 347 VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVV--AVKRLKDASIGGKREFE 404
++F+G+ + ++ +G+G +G K + G+ + A K++ + F+
Sbjct: 14 LYFQGSTKGDINQYYTLE-NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFK 71
Query: 405 QHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRL 464
Q +E++ L HPN++ L + + LV E G LF R + +
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF-----ERVVHKRVFRESDAA 126
Query: 465 KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPSTVP 521
+I +A+ C L + H ++K N L ++ DFGL+ P +
Sbjct: 127 RIMKDVLSAVAY----CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 182
Query: 522 RSN----GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
R+ Y +P++ + D +S GV++ LL G P
Sbjct: 183 RTKVGTPYYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 158 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 205
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 206 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 240
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 17/209 (8%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK-----REFEQHMEVLGRLRHPNL 418
E++GKG F + + + G AVK + A + ++ + L+HP++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
V L Y + +V E+M L + + R + +A+ R +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQILEAL 143
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNA---RVSDFGLSIFAPPSTVPRSNGYRAPELSSSD 535
C + H ++K NVLL N+ ++ DFG++I S + P + +
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 536 GRKQS---QKSDVYSFGVLLLELLTGKCP 561
K+ + DV+ GV+L LL+G P
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 173 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 220
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 221 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 255
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 22/203 (10%)
Query: 368 LGKGGFGTAYKAVLDDGSVV--AVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
+G+G +G K + G+ + A K++ + F+Q +E++ L HPN++ L +
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 426 FAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLK 485
+ LV E G LF R + + +I +A+ C L
Sbjct: 76 EDNTDIYLVMELCTGGELF-----ERVVHKRVFRESDAARIMKDVLSAVAY----CHKLN 126
Query: 486 LTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPSTVPRSN----GYRAPELSSSDGRK 538
+ H ++K N L ++ DFGL+ P + R+ Y +P++
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG---L 183
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
+ D +S GV++ LL G P
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPP 206
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 52/239 (21%)
Query: 342 ERGSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGKR 401
R S+ F +G +E++ E +G G + + + + ++ D S KR
Sbjct: 14 HRNSIQFTDG---YEVK-------EDIGVGSYSVCKRCIHKATNXEFAVKIIDKS---KR 60
Query: 402 EFEQHMEVLGRL-RHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDW 460
+ + +E+L R +HPN++ LK Y + +V+E G L LD
Sbjct: 61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL--------------LDK 106
Query: 461 TTRLKIAAG--AARGLAFIHFTCKSLK---LTHGNIKSTNVL-LDKTGN---ARVSDFGL 511
R K + A+ L I T + L + H ++K +N+L +D++GN R+ DFG
Sbjct: 107 ILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 512 S---------IFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+ + P T + APE+ G + D++S GVLL LTG P
Sbjct: 167 AKQLRAENGLLXTPCYTA----NFVAPEVLERQGYDAA--CDIWSLGVLLYTXLTGYTP 219
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 159 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----QDIYRASYYRKGGCA 206
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 207 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 158 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 205
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 206 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 175 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 222
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 223 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 159 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 206
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 207 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 241
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDAS---------IGGKREFEQHMEVLGRLRHPN 417
+G G +GT YKA G VA+K ++ + I RE + L HPN
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL-LRRLEAFEHPN 75
Query: 418 LVGLKAYYFA----REEKL-LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
+V L RE K+ LV E++ + L L PG L T + R
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLR 131
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS-IFA-----PPSTVPRSNGY 526
GL F+H C + H ++K N+L+ G +++DFGL+ I++ P V + Y
Sbjct: 132 GLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWY 185
Query: 527 RAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
RAPE+ + D++S G + E+ K
Sbjct: 186 RAPEVLLQS--TYATPVDMWSVGCIFAEMFRRK 216
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 150 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 197
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 198 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 232
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 185 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 232
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 233 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 165 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 212
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 213 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 247
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 87/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R+ YR
Sbjct: 199 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRAGYYRKGGCA 246
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 247 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 281
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 43/223 (19%)
Query: 367 MLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYY 425
+LG+G FG KA D A+K+++ + + +L L H +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSE-VXLLASLNHQYVVRYYAAW 71
Query: 426 FAREEKL-------------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
R + + EY N +L+ L+H + W ++
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS---------IFAPPSTVPRS 523
L++IH S + H N+K N+ +D++ N ++ DFGL+ + +P S
Sbjct: 128 ALSYIH----SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 524 NG----------YRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ Y A E+ G ++K D YS G++ E +
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGH-YNEKIDXYSLGIIFFEXI 225
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKDA-SIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R++ YR
Sbjct: 173 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRASYYRKGGCA 220
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 221 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 255
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 52/221 (23%)
Query: 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+LG+G +G A G +VA+K+++ D + R + +++L +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITI-- 74
Query: 424 YYFAR-------EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ R E ++ E M +T L ++ + F
Sbjct: 75 FNIQRPDSFENFNEVYIIQELM----------------QTDLHRVISTQMLSDDHIQY-F 117
Query: 477 IHFTCKSLKLTHG------NIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN------ 524
I+ T +++K+ HG ++K +N+L++ + +V DFGL+ S S
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 525 ---------GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
YRAPE+ + K S+ DV+S G +L EL
Sbjct: 178 GMVEFVATRWYRAPEVMLTSA-KYSRAMDVWSCGCILAELF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 52/221 (23%)
Query: 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+LG+G +G A G +VA+K+++ D + R + +++L +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITI-- 74
Query: 424 YYFAR-------EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ R E ++ E M +T L ++ + F
Sbjct: 75 FNIQRPDSFENFNEVYIIQELM----------------QTDLHRVISTQMLSDDHIQY-F 117
Query: 477 IHFTCKSLKLTHG------NIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN------ 524
I+ T +++K+ HG ++K +N+L++ + +V DFGL+ S S
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 525 ---------GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
YRAPE+ + K S+ DV+S G +L EL
Sbjct: 178 GMTEXVATRWYRAPEVMLTSA-KYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 52/221 (23%)
Query: 367 MLGKGGFGTAYKAVLD-DGSVVAVKRLK--DASIGGKREFEQHMEVLGRLRHPNLVGLKA 423
+LG+G +G A G +VA+K+++ D + R + +++L +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITI-- 74
Query: 424 YYFAR-------EEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
+ R E ++ E M +T L ++ + F
Sbjct: 75 FNIQRPDSFENFNEVYIIQELM----------------QTDLHRVISTQMLSDDHIQY-F 117
Query: 477 IHFTCKSLKLTHG------NIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRSN------ 524
I+ T +++K+ HG ++K +N+L++ + +V DFGL+ S S
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 525 ---------GYRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
YRAPE+ + K S+ DV+S G +L EL
Sbjct: 178 GMTEYVATRWYRAPEVMLTSA-KYSRAMDVWSCGCILAELF 217
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 87/216 (40%), Gaps = 39/216 (18%)
Query: 368 LGKGGFGTAYKAVL----DDGS--VVAVKRLKD-ASIGGKREFEQHMEVLGRLRHPNLVG 420
LG G FG Y+ + +D S VAVK L + S + +F ++ + H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 421 LKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTP--LDWTTRLKIAAGAARGLAFI- 477
+ ++ E M G L L R P L L +A A G ++
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 478 --HFTCKSLKLTHGNIKSTNVLLDKTGNARVS---DFGLSIFAPPSTVPRSNGYRA---- 528
HF H +I + N LL G RV+ DFG++ + R+ YR
Sbjct: 176 ENHFI-------HRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRAGYYRKGGCA 223
Query: 529 -------PELSSSDGRKQSQKSDVYSFGVLLLELLT 557
P + +G S K+D +SFGVLL E+ +
Sbjct: 224 MLPVKWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFS 258
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 366 EMLGKGGFGTAYKAV---LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
E LGKG F + V + K S ++ E+ + L+HPN+V L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL------AF 476
L+ + + G LF D R + A A
Sbjct: 77 DSISEEGHHYLIFDLVTGGELF-------------EDIVAREYYSEADASHCIQQILEAV 123
Query: 477 IHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPPST-----VPRSNGYRA 528
+H C + + H N+K N+LL K +++DFGL+I + GY +
Sbjct: 124 LH--CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 181
Query: 529 PELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
PE+ D + D+++ GV+L LL G P
Sbjct: 182 PEVLRKD--PYGKPVDLWACGVILYILLVGYPP 212
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 57/267 (21%)
Query: 347 VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVV-AVK-----RLKDASIGGK 400
++F+G EL+ +G+G +G A+ + + A+K +++ +
Sbjct: 14 LYFQGGSLLELQKKYHLKGA-IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDV 72
Query: 401 REFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLF---------------- 444
+ + ++ +L HPN+ L Y + LV E G L
Sbjct: 73 ERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 445 ---------------WLLHGNRGPGRTPLDWTTRLKIAAGAAR----GLAFIHFTCKSLK 485
++G+ R LD+ R K+ + R L ++H +
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH----NQG 188
Query: 486 LTHGNIKSTNVLL--DKTGNARVSDFGLSI---------FAPPSTVPRSNGYRAPELSSS 534
+ H +IK N L +K+ ++ DFGLS + +T + + APE+ ++
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
K D +S GVLL LL G P
Sbjct: 249 TNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 24/208 (11%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRL--KDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
E LGKG F + V + G A K + K S ++ E+ + L+HPN+V L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGL-AFIHFTC 481
L+ + + G LF ++ + + + L A +H C
Sbjct: 88 DSISEEGHHYLIFDLVTGGELF--------EDIVAREYYSEADASHCIQQILEAVLH--C 137
Query: 482 KSLKLTHGNIKSTNVLLD---KTGNARVSDFGLSIFAPPST-----VPRSNGYRAPELSS 533
+ + H ++K N+LL K +++DFGL+I + GY +PE+
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
D + D+++ GV+L LL G P
Sbjct: 198 KD--PYGKPVDLWACGVILYILLVGYPP 223
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF 426
LG+G FG ++ G AVK+++ E+ + G L P +V L Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAG-LSSPRIVPL--YGA 132
Query: 427 AREEKL--LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSL 484
RE + E + GSL L+ + G P D L A GL ++H +
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLI---KQMGCLPED--RALYYLGQALEGLEYLH----TR 183
Query: 485 KLTHGNIKSTNVLLDKTGN-ARVSDFGLSIFAPPST----------VPRSNGYRAPELSS 533
++ HG++K+ NVLL G+ A + DFG ++ P +P + + APE+
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 534 SDGRKQSQKSDVYSFGVLLLELLTGKCP 561
G+ K D++S ++L +L G P
Sbjct: 244 --GKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 43/232 (18%)
Query: 359 DLLRASAEM---LGKGGFGTAYKAVLDD--GSVVAVKRLK--DASIGGKREFEQHMEVLG 411
D+L A E+ LG+G FG + + G VAVK +K D R Q +E L
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 412 RLRHPN----LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA 467
PN V + ++ +V E + + ++ + G P K+A
Sbjct: 70 TTD-PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMA 124
Query: 468 AGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-------------------NARVSD 508
+ + F+H S KLTH ++K N+L ++ + +V D
Sbjct: 125 YQICKSVNFLH----SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 509 FGLSIF--APPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
FG + + ST+ + YRAPE+ + G SQ DV+S G +L+E G
Sbjct: 181 FGSATYDDEHHSTLVSTRHYRAPEVILALG--WSQPCDVWSIGCILIEYYLG 230
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNL 418
E +G G FG+ +K V DG + A+KR K G RE H VLG +H ++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG--QHSHV 71
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGN-RGPGRTPLDWTTRLKIAAGAARGLAFI 477
V + + + L+ +EY GSL + N R L + G RGL +I
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG--RGLRYI 129
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKT 501
H S+ L H +IK +N+ + +T
Sbjct: 130 H----SMSLVHMDIKPSNIFISRT 149
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNL 418
E +G G FG+ +K V DG + A+KR K G RE H VLG +H ++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG--QHSHV 71
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGN-RGPGRTPLDWTTRLKIAAGAARGLAFI 477
V + + + L+ +EY GSL + N R L + G RGL +I
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG--RGLRYI 129
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKT 501
H S+ L H +IK +N+ + +T
Sbjct: 130 H----SMSLVHMDIKPSNIFISRT 149
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN-ARVSDFGLSIFAPPST--------- 519
A GL ++H + ++ HG++K+ NVLL G+ A + DFG ++ P
Sbjct: 159 ALEGLEYLH----TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 520 -VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+P + + APE+ G+ K D++S ++L +L G P
Sbjct: 215 YIPGTETHMAPEVVM--GKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNL 418
E +G G FG+ +K V DG + A+KR K G RE H VLG +H ++
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG--QHSHV 69
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGN-RGPGRTPLDWTTRLKIAAGAARGLAFI 477
V + + + L+ +EY GSL + N R L + G RGL +I
Sbjct: 70 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG--RGLRYI 127
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKT 501
H S+ L H +IK +N+ + +T
Sbjct: 128 H----SMSLVHMDIKPSNIFISRT 147
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 470 AARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN-ARVSDFGLSIFAPPST--------- 519
A GL ++H + ++ HG++K+ NVLL G+ A + DFG ++ P
Sbjct: 175 ALEGLEYLH----TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 520 -VPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
+P + + APE+ G+ K D++S ++L +L G P
Sbjct: 231 YIPGTETHMAPEVVM--GKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 43/232 (18%)
Query: 359 DLLRASAEM---LGKGGFGTAYKAVLDD--GSVVAVKRLK--DASIGGKREFEQHMEVLG 411
D+L A E+ LG+G FG + + G VAVK +K D R Q +E L
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 412 RLRHPN----LVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIA 467
PN V + ++ +V E + + ++ + G P K+A
Sbjct: 70 TTD-PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMA 124
Query: 468 AGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTG-------------------NARVSD 508
+ + F+H S KLTH ++K N+L ++ + +V D
Sbjct: 125 YQICKSVNFLH----SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 509 FGLSIF--APPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
FG + + ST+ YRAPE+ + G SQ DV+S G +L+E G
Sbjct: 181 FGSATYDDEHHSTLVXXRHYRAPEVILALG--WSQPCDVWSIGCILIEYYLG 230
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 366 EMLGKGGFGTAYKAVLD-DGSVVAVKRLKDASIG------GKREFEQHMEVLGRLRHPNL 418
E +G G FG+ +K V DG + A+KR K G RE H VLG +H ++
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG--QHSHV 73
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGN-RGPGRTPLDWTTRLKIAAGAARGLAFI 477
V + + + L+ +EY GSL + N R L + G RGL +I
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG--RGLRYI 131
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKT 501
H S+ L H +IK +N+ + +T
Sbjct: 132 H----SMSLVHMDIKPSNIFISRT 151
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLK----DASIGGKREFEQHMEVLGRLRHPNLVGLK 422
LG+G +G YKA+ VA+KR++ + + G E + +L L+H N++ LK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE--VSLLKELQHRNIIELK 99
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
+ L+ EY N ++ ++ P D + R+ I + + + ++F C
Sbjct: 100 SVIHHNHRLHLIFEYAENDLKKYM---DKNP-----DVSMRV-IKSFLYQLINGVNF-CH 149
Query: 483 SLKLTHGNIKSTNVLL-----DKTGNARVSDFGLS-IFAPP----STVPRSNGYRAPELS 532
S + H ++K N+LL +T ++ DFGL+ F P + + YR PE+
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 533 SSDGRKQSQKSDVYSFGVLLLELL 556
R S D++S + E+L
Sbjct: 210 LG-SRHYSTSVDIWSIACIWAEML 232
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 33/240 (13%)
Query: 344 GSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKRE 402
GS F G RFE D+ + ++LG+G + L AVK ++ +
Sbjct: 1 GSTDSFSG--RFE--DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR 56
Query: 403 FEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ +E+L + + H N++ L ++ + LV E M GS+ +H R +
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-----FNEL 111
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLS------ 512
+ A L F+H + + H ++K N+L + + ++ DFGL
Sbjct: 112 EASVVVQDVASALDFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 513 -----IFAPPSTVP-RSNGYRAPELSSSDGRKQS---QKSDVYSFGVLLLELLTGKCPSV 563
I P P S Y APE+ + + S ++ D++S GV+L LL+G P V
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 100/248 (40%), Gaps = 41/248 (16%)
Query: 345 SMVFFEGTKRFELEDLLRASAEMLGKGGFGTAY------KAVLDDGSVVAVKRLKDASIG 398
SM F EG ++E + +G GGFG Y K D VV V+ ++ +
Sbjct: 22 SMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF 81
Query: 399 GKREFEQH------MEVLGRLRHPNLVGLKAYYFA-------REEKLLVSEYMPNGSLFW 445
+ +F Q ++ + + +G+ +Y + R + +V E + G
Sbjct: 82 SELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQ 139
Query: 446 LLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNAR 505
+ G G + +T L++ L +IH + HG+IK+ N+LL +
Sbjct: 140 KISGQNGTFKK----STVLQLGIRMLDVLEYIHEN----EYVHGDIKAANLLLGYKNPDQ 191
Query: 506 V--SDFGLSIFAPPS-------TVPRSNGYRAPELSSSDGRKQ---SQKSDVYSFGVLLL 553
V +D+GLS P+ PR E +S D K S++SDV G +L
Sbjct: 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCML 251
Query: 554 ELLTGKCP 561
L GK P
Sbjct: 252 RWLCGKLP 259
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 27 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 84
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 85 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 138
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 139 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 195 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 27 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 84
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 85 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 138
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 139 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 195 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 25 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 82
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 83 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 136
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 137 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 193 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 36/216 (16%)
Query: 368 LGKGGFGTAYKAVLDD-GSVVAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGLKAYYF 426
LG GG G + AV +D VA+K++ + + ++++ RL H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 427 AREEKL--------------LVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
+L +V EYM L +GP L+ RL R
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGP---LLEEHARL-FMYQLLR 131
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPPSTVPR--------S 523
GL +IH S + H ++K N+ ++ ++ DFGL+ P + +
Sbjct: 132 GLKYIH----SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 524 NGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGK 559
YR+P L S ++ D+++ G + E+LTGK
Sbjct: 188 KWYRSPRLLLSPN-NYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 11 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 68
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 69 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 123 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 179 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 5 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 62
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 63 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 116
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 117 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 173 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 7 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 64
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 65 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 118
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 119 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 175 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 205
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 29/104 (27%)
Query: 482 KSLKLTHGNIKSTNVLLD-------------------------KTGNARVSDFGLSIFAP 516
+ + LTH ++K N+LLD K+ ++ DFG + F
Sbjct: 154 RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS 213
Query: 517 P--STVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
++ + YRAPE+ + G S SD++SFG +L EL TG
Sbjct: 214 DYHGSIINTRQYRAPEVILNLGWDVS--SDMWSFGCVLAELYTG 255
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 11 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 68
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 69 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 122
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 123 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 179 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 74
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 75 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 128
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 129 GMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 185 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 215
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLRH-PNLVGLKAYY 425
LG+G + ++A+ + + V VK LK K + ++ +++L LR PN++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVK---KNKIKREIKILENLRGGPNIITLADIV 101
Query: 426 F--AREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCKS 483
LV E++ N L +T D+ R + + L + C S
Sbjct: 102 KDPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYE-ILKALDY----CHS 149
Query: 484 LKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSDGRK 538
+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D +
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVDYQM 208
Query: 539 QSQKSDVYSFGVLLLELLTGKCP 561
D++S G +L ++ K P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEP 231
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 426
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 427 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 480
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 481 GMKYL----EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 537 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 567
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRL--KDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
E LGKG F + + + G A K + K S ++ E+ + L+HPN+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
LV + + G LF ++ + + + L ++ C
Sbjct: 70 DSISEEGFHYLVFDLVTGGELF--------EDIVAREYYSEADASHCIQQILESVNH-CH 120
Query: 483 SLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPST-----VPRSNGYRAPELSSS 534
+ H ++K N+LL K +++DFGL+I + GY +PE+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
D + D+++ GV+L LL G P
Sbjct: 181 D--PYGKPVDMWACGVILYILLVGYPP 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 360 LLRASAEMLGKGGFGTAYKAVLD-------DGSVVAVKRLKDASIGGKREFEQHMEVLGR 412
LL + LG G FGT K + D ++ K E V+ +
Sbjct: 370 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDELLAEANVMQQ 427
Query: 413 LRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 472
L +P +V + A E +LV E G L L NR + +++ +
Sbjct: 428 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 481
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS--------IFAPPSTVPRSN 524
G+ ++ + H ++ + NVLL A++SDFGLS + +
Sbjct: 482 GMKYL----EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLT 557
+ APE + K S KSDV+SFGVL+ E +
Sbjct: 538 KWYAPECINY--YKFSSKSDVWSFGVLMWEAFS 568
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 366 EMLGKGGFGTAYKAV-LDDGSVVAVKRL--KDASIGGKREFEQHMEVLGRLRHPNLVGLK 422
E LGKG F + + + G A K + K S ++ E+ + L+HPN+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 423 AYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHFTCK 482
LV + + G LF + ++ + + + L ++ C
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI--------VAREYYSEADASHCIQQILESVNH-CH 120
Query: 483 SLKLTHGNIKSTNVLL---DKTGNARVSDFGLSIFAPPST-----VPRSNGYRAPELSSS 534
+ H ++K N+LL K +++DFGL+I + GY +PE+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 535 DGRKQSQKSDVYSFGVLLLELLTGKCP 561
D + D+++ GV+L LL G P
Sbjct: 181 D--PYGKPVDMWACGVILYILLVGYPP 205
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 23/110 (20%)
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL-----------S 512
L I A + F+H S L H ++K +N+ +V DFGL +
Sbjct: 167 LHIFIQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 513 IFAPPSTVPRSNG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELL 556
+ P G Y +PE G S K D++S G++L ELL
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPE--QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 33/240 (13%)
Query: 344 GSMVFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGKRE 402
GS F G RFE D+ + ++LG+G + L AVK ++ +
Sbjct: 1 GSTDSFSG--RFE--DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR 56
Query: 403 FEQHMEVLGRLR-HPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWT 461
+ +E+L + + H N++ L ++ + LV E M GS+ +H R +
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-----FNEL 111
Query: 462 TRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLD---KTGNARVSDFGLS------ 512
+ A L F+H + + H ++K N+L + + ++ DF L
Sbjct: 112 EASVVVQDVASALDFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167
Query: 513 -----IFAPPSTVP-RSNGYRAPELSSSDGRKQS---QKSDVYSFGVLLLELLTGKCPSV 563
I P P S Y APE+ + + S ++ D++S GV+L LL+G P V
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 36/216 (16%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGK-----------REFEQHMEVLGRLRHP 416
+ G +G V +G VA+KR+ + G+ + + + +L HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 417 NLVGLKAYYFAREE----KL-LVSEYMPNGSLFWLLHGNR---GPGRTPLDWTTRLKIAA 468
N++GL+ + EE KL LV+E M L ++H R P
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY-------FMY 141
Query: 469 GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSN 524
GL +H + H ++ N+LL + + DF L + A +
Sbjct: 142 HILLGLHVLH----EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKC 560
YRAPEL + ++ D++S G ++ E+ K
Sbjct: 198 WYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 30/235 (12%)
Query: 343 RGSM----VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASI 397
RGSM V FE +EL E++GKG F + + + G AVK + A
Sbjct: 14 RGSMADDDVLFEDV--YEL-------CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKF 64
Query: 398 GGK-----REFEQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRG 452
+ ++ + L+HP++V L Y + +V E+M L + +
Sbjct: 65 TSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI----- 119
Query: 453 PGRTPLDWTTRLKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNA---RVSDF 509
R + +A+ R + C + H ++K VLL N+ ++ F
Sbjct: 120 VKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF 179
Query: 510 GLSIFAPPSTVPRSNGYRAPELSSSDGRKQS---QKSDVYSFGVLLLELLTGKCP 561
G++I S + P + + K+ + DV+ GV+L LL+G P
Sbjct: 180 GVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 36/216 (16%)
Query: 368 LGKGGFGTAYKAVLDDGSVVAVKRLKDASIGGK-----------REFEQHMEVLGRLRHP 416
+ G +G V +G VA+KR+ + G+ + + + +L HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 417 NLVGLKAYYFAREE----KL-LVSEYMPNGSLFWLLHGNR---GPGRTPLDWTTRLKIAA 468
N++GL+ + EE KL LV+E M L ++H R P
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY-------FMY 141
Query: 469 GAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGL----SIFAPPSTVPRSN 524
GL +H + H ++ N+LL + + DF L + A +
Sbjct: 142 HILLGLHVLH----EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKC 560
YRAPEL + ++ D++S G ++ E+ K
Sbjct: 198 WYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKR--LKDASIGGKREFEQHMEVLGRLRHPNLVGL--- 421
+G+G FG +KA G VA+K+ +++ G + +++L L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 422 ---KA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
KA Y + LV ++ + L G + ++ GL +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI---FAPPSTVPRSNG------YR 527
IH K+ H ++K+ NVL+ + G +++DFGL+ A S R YR
Sbjct: 141 IHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PEL + R D++ G ++ E+ T
Sbjct: 197 PPELLLGE-RDYGPPIDLWGAGCIMAEMWT 225
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NVL+D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 17/209 (8%)
Query: 365 AEMLGKGGFGTAYKAV-LDDGSVVAVKRLKDASIGGK-----REFEQHMEVLGRLRHPNL 418
E++GKG F + + + G AVK + A + ++ + L+HP++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 419 VGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIH 478
V L Y + +V E+M L + + R + +A+ R +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQILEAL 143
Query: 479 FTCKSLKLTHGNIKSTNVLLDKTGNA---RVSDFGLSIFAPPSTVPRSNGYRAPELSSSD 535
C + H ++K VLL N+ ++ FG++I S + P + +
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 536 GRKQS---QKSDVYSFGVLLLELLTGKCP 561
K+ + DV+ GV+L LL+G P
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKR--LKDASIGGKREFEQHMEVLGRLRHPNLVGL--- 421
+G+G FG +KA G VA+K+ +++ G + +++L L+H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 422 ---KA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
KA Y + LV ++ + L G + ++ GL +
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI---FAPPSTVPRSNG------YR 527
IH K+ H ++K+ NVL+ + G +++DFGL+ A S R YR
Sbjct: 140 IHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PEL + R D++ G ++ E+ T
Sbjct: 196 PPELLLGE-RDYGPPIDLWGAGCIMAEMWT 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKR--LKDASIGGKREFEQHMEVLGRLRHPNLVGL--- 421
+G+G FG +KA G VA+K+ +++ G + +++L L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 422 ---KA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
KA Y + LV ++ + L G + ++ GL +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI---FAPPSTVPRSNG------YR 527
IH K+ H ++K+ NVL+ + G +++DFGL+ A S R YR
Sbjct: 141 IHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PEL + R D++ G ++ E+ T
Sbjct: 197 PPELLLGE-RDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 368 LGKGGFGTAYKAV-LDDGSVVAVKR--LKDASIGGKREFEQHMEVLGRLRHPNLVGL--- 421
+G+G FG +KA G VA+K+ +++ G + +++L L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 422 ---KA--YYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAF 476
KA Y + LV ++ + L G + ++ GL +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI---FAPPSTVPRSNG------YR 527
IH K+ H ++K+ NVL+ + G +++DFGL+ A S R YR
Sbjct: 141 IHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 528 APELSSSDGRKQSQKSDVYSFGVLLLELLT 557
PEL + R D++ G ++ E+ T
Sbjct: 197 PPELLLGE-RDYGPPIDLWGAGCIMAEMWT 225
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 203
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 204 YQMYDYSLDMWSLGCMLASMIFRKEP 229
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 41/183 (22%)
Query: 388 AVKRLKDASIGGKREFEQHMEVLGRLRHPNLVGL----KAYYFAREEKLLVSEYMPNGSL 443
A+K L+D +RE E H + P++V + + Y R+ L+V E + G L
Sbjct: 47 ALKMLQDCP-KARREVELHWRAS---QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL 102
Query: 444 FWLLHGNRGPGRTPLDWTTRL--KIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLL-DK 500
F +R R +T R +I + ++H S+ + H ++K N+L K
Sbjct: 103 F-----SRIQDRGDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSK 153
Query: 501 TGNA--RVSDFGLSIFAPPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
NA +++DFG FA +T G K + D++S GV++ LL G
Sbjct: 154 RPNAILKLTDFG---FAKETT----------------GEKYDKSCDMWSLGVIMYILLCG 194
Query: 559 KCP 561
P
Sbjct: 195 YPP 197
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 204
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 205 YQMYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 204
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 205 YQMYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 347 VFFEGTKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQ 405
++F+G K + D ++G+G +G Y A + VA+K++ R FE
Sbjct: 14 LYFQGIKNVHVPDNY-IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN-------RMFED 65
Query: 406 HMEVLGRLRHPNLVG-LKAYYFAREEKLLV-SEYMPNGSLFWLLH----GNRGPGRTPLD 459
++ LR ++ LK+ Y R L++ + + L+ +L + +TP+
Sbjct: 66 LIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF 125
Query: 460 WTTR--LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512
T I G FIH + + H ++K N LL++ + +V DFGL+
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESG----IIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 152 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 210
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 211 YQMYDYSLDMWSLGCMLASMIFRKEP 236
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLDKTGNA-RVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S+ + H ++K NV++D R+ D+GL+ F P + S ++ PEL D
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVD 205
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ K P
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 366 EMLGKGGFGTAYKAVLDDGSV-VAVKRLKDASIGGKREFEQHMEVLGRLRHPNLVG-LKA 423
++G+G +G Y A + + VA+K++ R FE ++ LR ++ LK+
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVN-------RMFEDLIDCKRILREITILNRLKS 86
Query: 424 YYFAREEKLLVSE-YMPNGSLFWLLH----GNRGPGRTPLDWTTR--LKIAAGAARGLAF 476
Y R L++ E + L+ +L + +TP+ T + I G F
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 477 IHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLS 512
IH + + H ++K N LL++ + ++ DFGL+
Sbjct: 147 IHES----GIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 80/202 (39%), Gaps = 32/202 (15%)
Query: 368 LGKGGFGTAYKA-VLDDGSVVAVKRLKDASIGGKREFEQHMEVLGRLR---HPNLVGLKA 423
LG G +G +K +DG + AVKR G K + EV + HP V L+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 424 YYFAREEKLLVSEYMPNGSLFWLLHGNRGPG--RTPLDWTTRLKIAA--GAARG--LAFI 477
A EE G + +L GP + W L A G R LA
Sbjct: 125 ---AWEE----------GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 478 HFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSI---FAPPSTVPRSN-GYRAPELSS 533
H S L H ++K N+ L G ++ DFGL + A V + Y APEL
Sbjct: 172 HL--HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ 229
Query: 534 SDGRKQSQKSDVYSFGVLLLEL 555
+DV+S G+ +LE+
Sbjct: 230 GS---YGTAADVFSLGLTILEV 248
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P+ S ++ PEL D
Sbjct: 153 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL-LVD 211
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ + P
Sbjct: 212 YQMYDYSLDMWSLGCMLASMIFRREP 237
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPPSTVPR----SNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P+ S ++ PEL D
Sbjct: 148 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL-LVD 206
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G +L ++ + P
Sbjct: 207 YQMYDYSLDMWSLGCMLASMIFRREP 232
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 17/164 (10%)
Query: 404 EQHMEVLGRLRHPNLVGLKAYYFAREEKLLVSEYMPNGSLFWLLHGNRGPGRTPLDWTTR 463
++ GRL+ P++V + + + +L V + NG +GP P
Sbjct: 82 QREARTAGRLQEPHVVPIHDF-GEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPR----- 135
Query: 464 LKIAAGAARGLAFIHFTCKSLKLTHGNIKSTNVLLDKTGNARVSDFGLSIFAPPSTVPRS 523
A R + + TH ++K N+L+ A + DFG++ + +
Sbjct: 136 ---AVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL 192
Query: 524 NG------YRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
Y APE S + ++D+Y+ +L E LTG P
Sbjct: 193 GNTVGTLYYXAPERFSES--HATYRADIYALTCVLYECLTGSPP 234
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTG------NARVSDFGLSIFAPP--STVPRSN 524
GL ++H C + H +IK NVL++ +++D G + + + ++
Sbjct: 143 GLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
YR+PE+ G +D++S L+ EL+TG
Sbjct: 200 EYRSPEVLL--GAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 473 GLAFIHFTCKSLKLTHGNIKSTNVLLDKTGN------ARVSDFGLSIFAPP--STVPRSN 524
GL ++H C + H +IK NVL++ + +++D G + + + ++
Sbjct: 143 GLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 525 GYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTG 558
YR+PE+ G +D++S L+ EL+TG
Sbjct: 200 EYRSPEVLL--GAPWGCGADIWSTACLIFELITG 231
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 199
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 199
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 199
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 199
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 142 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 200
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 201 LQDYDYSLDMWSLGCMFAGMIFRKEP 226
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 199
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 142 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 200
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 201 LQDYDYSLDMWSLGCMFAGMIFRKEP 226
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 199
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEP 225
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 162 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 220
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 221 LQDYDYSLDMWSLGCMFAGMIFRKEP 246
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 481 CKSLKLTHGNIKSTNVLLD-KTGNARVSDFGLSIFAPP----STVPRSNGYRAPELSSSD 535
C S + H ++K NV++D + R+ D+GL+ F P + S ++ PEL D
Sbjct: 143 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL-LVD 201
Query: 536 GRKQSQKSDVYSFGVLLLELLTGKCP 561
+ D++S G + ++ K P
Sbjct: 202 LQDYDYSLDMWSLGCMFAGMIFRKEP 227
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 32/171 (18%)
Query: 93 LSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIP 152
L L N+FT LSN L L+ LS+N + S S++ +L L LS+N
Sbjct: 36 LYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL----- 90
Query: 153 XXXXXXXXXXXXXXEANRFSGPITGLDLRNLQDFNVSGNHLSGQIPK----SLSGFPDSA 208
R P T L++L+ ++ GN +S +P+ LS A
Sbjct: 91 -----------------RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLA 132
Query: 209 FTQNAALCGSPMQACKTMV-TDPKKPGSDGAIASPLNPGNNPTNVVSSTPS 258
N C MQ V ++ K+PG IA PG ++ +TPS
Sbjct: 133 IGANPLYCDCNMQWLSDWVKSEYKEPG----IARCAGPGEMADKLLLTTPS 179
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNG 125
RV HL ++L + L+ L +T L L +NR P+L+ L L++L S N
Sbjct: 444 RVLHLAHKDLTVLCHLEQLLLVTHL---DLSHNRLRALPPALAALRCLEVLQASDNAL-- 498
Query: 126 EFPDSVSSLFRLYRLDLSFNNFS 148
E D V++L RL L L N
Sbjct: 499 ENVDGVANLPRLQELLLCNNRLQ 521
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 66 RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNG 125
RV HL ++L + L+ L +T L L +NR P+L+ L L++L S N
Sbjct: 444 RVLHLAHKDLTVLCHLEQLLLVTHL---DLSHNRLRALPPALAALRCLEVLQASDNAL-- 498
Query: 126 EFPDSVSSLFRLYRLDLSFNNFS 148
E D V++L RL L L N
Sbjct: 499 ENVDGVANLPRLQELLLCNNRLQ 521
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTG-PVPSLSNLTALKLLFLSHNNFNG 125
+SH L++L L G +L L VL + +NR T P+ +L L L+ L+L N
Sbjct: 84 LSHNQLQSLPLLGQ-----TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138
Query: 126 EFPDSVSSLFRLYRLDLSFNNFS 148
P ++ +L +L L+ NN +
Sbjct: 139 LPPGLLTPTPKLEKLSLANNNLT 161
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 72 LENLQLSG---------SLQPLTSLTQL-----RVLSLKYNRFTGPVPSLSNLTALKLLF 117
LE L+LSG S Q LTSL +L +V +++ N F +L +L+ L
Sbjct: 180 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF-------DDLKSLEELN 232
Query: 118 LSHNNFNGEFPDSVSSLFRLYRLDLSFN 145
LSHNN D + L RL R+ L+ N
Sbjct: 233 LSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 78 SGSLQPLTS-LTQ-LRVLSLKYNRFTGPVPS-LSNLTALKLLFLSHNNFNGEFPDSVSSL 134
SGSL + S LT+ ++ L L NR T S L L+ L L+ N N DS SSL
Sbjct: 40 SGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99
Query: 135 FRLYRLDLSFNNFSG 149
L LDLS+N S
Sbjct: 100 GSLEHLDLSYNYLSN 114
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTG-PVPSLSNLTALKLLFLSHNNFNG 125
+SH L++L L G +L L VL + +NR T P+ +L L L+ L+L N
Sbjct: 84 LSHNQLQSLPLLGQ-----TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138
Query: 126 EFPDSVSSLFRLYRLDLSFNNFS 148
P ++ +L +L L+ NN +
Sbjct: 139 LPPGLLTPTPKLEKLSLANNNLT 161
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 78 SGSLQPLTS-LTQ-LRVLSLKYNRFTGPVPS-LSNLTALKLLFLSHNNFNGEFPDSVSSL 134
SGSL + S LT+ ++ L L NR T S L L+ L L+ N N DS SSL
Sbjct: 14 SGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 73
Query: 135 FRLYRLDLSFNNFSG 149
L LDLS+N S
Sbjct: 74 GSLEHLDLSYNYLSN 88
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTG-PVPSLSNLTALKLLFLSHNNFNG 125
+SH L++L L G +L L VL + +NR T P+ +L L L+ L+L N
Sbjct: 84 LSHNQLQSLPLLGQ-----TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138
Query: 126 EFPDSVSSLFRLYRLDLSFNNFS 148
P ++ +L +L L+ NN +
Sbjct: 139 LPPGLLTPTPKLEKLSLANNNLT 161
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTG-PVPSLSNLTALKLLFLSHNNFNG 125
+SH L++L L G +L L VL + +NR T P+ +L L L+ L+L N
Sbjct: 85 LSHNQLQSLPLLGQ-----TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 139
Query: 126 EFPDSVSSLFRLYRLDLSFNNFS 148
P ++ +L +L L+ NN +
Sbjct: 140 LPPGLLTPTPKLEKLSLANNNLT 162
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 515 APPSTVPRSNGYRAPELSSSDGRKQSQKSDVYSFGVLLLELLTGKCP 561
AP + P G+RAPE+ + Q+ D++S GV+ L LL+G+ P
Sbjct: 204 APRAGTP---GFRAPEVLTK-CPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 67 VSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTG-PVPSLSNLTALKLLFLSHNNFNG 125
+SH L++L L G +L L VL + +NR T P+ +L L L+ L+L N
Sbjct: 84 LSHNQLQSLPLLGQ-----TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138
Query: 126 EFPDSVSSLFRLYRLDLSFNNFS 148
P ++ +L +L L+ NN +
Sbjct: 139 LPPGLLTPTPKLEKLSLANNNLT 161
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 72 LENLQLSG---------SLQPLTSLTQL-----RVLSLKYNRFTGPVPSLSNLTALKLLF 117
LE L+LSG S Q LTSL +L +V +++ N F +L +L+ L
Sbjct: 180 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF-------DDLKSLEELN 232
Query: 118 LSHNNFNGEFPDSVSSLFRLYRLDLSFN 145
LSHNN D + L RL R+ L+ N
Sbjct: 233 LSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 24/120 (20%)
Query: 84 LTSLTQLRVLSLKYNRFT---------GPVPSLSNLTALKLLFLSHNNFNGEFPDSV-SS 133
L L +L +L L++N GP+ L L+ L +L L N F+ E P V
Sbjct: 510 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKD 568
Query: 134 LFRLYRLDLSFNN--------FSGQIPXXXXXXXXXXXXXXEANRFSGP----ITGLDLR 181
LF L +DL NN F+ Q+ E F GP +T LD+R
Sbjct: 569 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMR 627
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 24/120 (20%)
Query: 84 LTSLTQLRVLSLKYNRFT---------GPVPSLSNLTALKLLFLSHNNFNGEFPDSV-SS 133
L L +L +L L++N GP+ L L+ L +L L N F+ E P V
Sbjct: 505 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKD 563
Query: 134 LFRLYRLDLSFNN--------FSGQIPXXXXXXXXXXXXXXEANRFSGP----ITGLDLR 181
LF L +DL NN F+ Q+ E F GP +T LD+R
Sbjct: 564 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMR 622
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 24/120 (20%)
Query: 84 LTSLTQLRVLSLKYNRFT---------GPVPSLSNLTALKLLFLSHNNFNGEFPDSV-SS 133
L L +L +L L++N GP+ L L+ L +L L N F+ E P V
Sbjct: 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKD 558
Query: 134 LFRLYRLDLSFNN--------FSGQIPXXXXXXXXXXXXXXEANRFSGP----ITGLDLR 181
LF L +DL NN F+ Q+ E F GP +T LD+R
Sbjct: 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMR 617
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 58 TGVSCLQN--RVSHLVLENLQLSGSLQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKL 115
T +S LQN + L L +S + PL +LT+ L+L N + LSN T L
Sbjct: 101 TDISALQNLTNLRELYLNEDNIS-DISPLANLTKXYSLNLGANHNLSDLSPLSNXTGLNY 159
Query: 116 LFLSHNNFNGEFPDSVSSLFRLYRLDLSFNNFSGQIP 152
L ++ + P +++L LY L L++N P
Sbjct: 160 LTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP 194
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 81 LQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRL 140
+ P++SLT+L+ L YN V SL+NLT + L HN + P +++L R+ +L
Sbjct: 324 ISPVSSLTKLQRLFF-YNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 380
Query: 141 DLS 143
L+
Sbjct: 381 GLN 383
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 81 LQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRL 140
+ P++SLT+L+ L YN V SL+NLT + L HN + P +++L R+ +L
Sbjct: 320 ISPVSSLTKLQRLFF-YNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 376
Query: 141 DLS 143
L+
Sbjct: 377 GLN 379
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 81 LQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRL 140
+ P++SLT+L+ L YN V SL+NLT + L HN + P +++L R+ +L
Sbjct: 319 ISPVSSLTKLQRLFF-YNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 375
Query: 141 DLS 143
L+
Sbjct: 376 GLN 378
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 81 LQPLTSLTQLRVLSLKYNRFTGPVPSLSNLTALKLLFLSHNNFNGEFPDSVSSLFRLYRL 140
+ P++SLT+L+ L YN V SL+NLT + L HN + P +++L R+ +L
Sbjct: 320 ISPVSSLTKLQRLFF-YNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 376
Query: 141 DLS 143
L+
Sbjct: 377 GLN 379
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,802,178
Number of Sequences: 62578
Number of extensions: 734967
Number of successful extensions: 3868
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 532
Number of HSP's that attempted gapping in prelim test: 2035
Number of HSP's gapped (non-prelim): 1169
length of query: 672
length of database: 14,973,337
effective HSP length: 105
effective length of query: 567
effective length of database: 8,402,647
effective search space: 4764300849
effective search space used: 4764300849
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)